NO08G02790.2, NO08G02790.2 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO08G02790.2
Unique Name	NO08G02790.2
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	5409
Alignment location	chr8:784274..790435 -

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr8	genome	chr8:784274..790435 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO08G02790.2 vs.
Match: EWM26586.1 (aminophospholipid transporter- class type member 2 [Nannochloropsis gaditana])

HSP 1 Score: 1389.8 bits (3596), Expect = 0.000e+0
Identity = 701/925 (75.78%), Postives = 785/925 (84.86%), Query Frame = 0

Query:   13 SMASMRRALSLRRTESAT-ADPVHRVVVVGDEEENKTKLQKEPHRAGPPHTGPGTQTNEVITSIYTLYSFLPLNLRRQMSRAANIYFLCISILQCIKAVSITSGVPTTALPLAFVLFVTAVKDAIEDFNRHKADATENNRLGHVLLKEKHFDLHHPHPTMWCDIKVGDVVVIKNRELIPADIVLLASSEPSGLAFVMTANLDGETNLKAKEVHQELRQLPLPAKLAGATVVCDLPNNNLEHFEGLYTLGPEAGERKVPLTQRNILLRGCMLRNTNWAVGVVVYTGKETKIQMNTAEATQKIGSVRRFVDRETVMVFGLQVLCCLCAAVVGGIYVGRGGQMPYLWVGARLPDPALSGFIQFWTYTVLFSNMLPISLLVTLDMVKFLQGMWMSWDLSMYHETRDPDGNLIEIPCVVRSSDLNEELGVIEHVFSDKTGTLTCNIMEFSKCTIGGVSYGLGLTQIGRAFRERNGMEIVEPPLRDPEEPVTPFVNIIDPALVAVMKDEMHPNHNKCRDFWLALALNHDVMPEGPEDRLVYSGSSPDETALVYAAKHHGFFFTAREPGKVTVKVKGKPIDFNVLHVLEFTSDRKKSSVVLRRENGSIVLFCKGADNIIKSRLSSTLNSPTEMAGIDADIAQYVNDGLRTLLLAKAELTAEQYEDWARRYHEAETSFKDRDAKRYALMEELERELEMMGITAIEDKLQEGVPETISALRQAGIKVWVLTGDKVDTAINIGHSCQLLSTEMRFLRLCGEDGKMVLDKQKVPLKEPIQEEMRSMVEAETKAAAAVAAAAAGGGGKRKGKEGKLPPRALIVDTYALAAILKYELQDLMLALCHLCVSIVCARVSPRQKALVVEMVKKADPSVQTLSIGDGANDVPMLQAAHVGVGIFGLEGQQAVNNSDYAIGQFRFLGDLLLVHGRFNYRRIAT 937
            S+AS+ RALS R     T AD  HR VVVGDEE    KLQ EP R GPPHTGPG  TNEV+TS+YT+YSF+P NL RQM RAAN+YFL ISILQ IKAVSITSGVPTTALPL+FVLFVTAVKDAIEDFNRH+ADA ENNR  ++L +EK +DLHH HP  W DIKVGDVVVIKNR+ IPADI+LL+S+EPSGLAFVMTANLDGETNLKAKEVH++ R L L AKL GA VVCDLPNN+LEHFEGLY+   + GE+K+PLT RNILLRGC+LRNT WAVGVVVYTG+E+KIQMN AE  QK+GSVRRFVDRETVMV GLQV CCL AA++GG+ V RG Q PYLW G  LPDPALSG IQF+TYTV+FSNMLPISLLVTLDMVKF QG++M+WDL MYH+  D +G  +EIPC+ RSSDLNEELGVIEHVFSDKTGTLTCN+MEFSKC+IGGV YGLGLTQIGRAFRERN + IVEPP RDP E +TPFVNI DPALVAVMK+E  P H KC DFWLALALNHDVMPE     LVYSGSSPDETALVYAAKHHGFFFTAREPGKVTV++KG+ ++FNVLHVLEFTSDRKKSSVVLRRE+G IVL+CKGADN+IKSRLS +LNS  E+A IDAD+AQY +DGLRTLLLAKAEL   QY +W +RYHEAETSFKDRD KRYALMEELEREL +MG+TAIEDKLQ+GVPETI +LR AGIKVWVLTGDKVDTAINI HSCQLLSTEMR LRLCGEDG++ LDK+KVP K  ++E++R++++  T    +  A           K      +AL++DTYAL+AILKYELQDLML LC  CVS++CARVSPRQKA+VVEMVKKADP  QTLSIGDGANDVPMLQAAHVGVGIFGLEGQQAVNNSDY+IGQFRFL +LL VHGRFNYRRIAT
Sbjct:   10 SLASLGRALSRRLGSHRTEADSEHRHVVVGDEETTHAKLQNEPWRPGPPHTGPGISTNEVVTSMYTIYSFVPQNLWRQMHRAANVYFLFISILQTIKAVSITSGVPTTALPLSFVLFVTAVKDAIEDFNRHRADAVENNRTSYLLTQEKGWDLHHAHPRKWQDIKVGDVVVIKNRDPIPADIILLSSAEPSGLAFVMTANLDGETNLKAKEVHKDFRNLSLSAKLDGAEVVCDLPNNSLEHFEGLYSFQKDTGEQKIPLTARNILLRGCVLRNTTWAVGVVVYTGRESKIQMNAAETRQKVGSVRRFVDRETVMVLGLQVTCCLVAAILGGLAVKRGAQTPYLWEGRELPDPALSGLIQFFTYTVIFSNMLPISLLVTLDMVKFFQGVFMTWDLRMYHQLEDAEGQPVEIPCLARSSDLNEELGVIEHVFSDKTGTLTCNVMEFSKCSIGGVRYGLGLTQIGRAFRERNNLTIVEPPPRDPTEAITPFVNINDPALVAVMKNERDPQHAKCLDFWLALALNHDVMPERHGHSLVYSGSSPDETALVYAAKHHGFFFTAREPGKVTVRIKGRAVEFNVLHVLEFTSDRKKSSVVLRREDGVIVLYCKGADNVIKSRLSESLNSREELAQIDADVAQYADDGLRTLLLAKAELQESQYREWEKRYHEAETSFKDRDEKRYALMEELERELVVMGVTAIEDKLQDGVPETIHSLRCAGIKVWVLTGDKVDTAINIAHSCQLLSTEMRLLRLCGEDGELPLDKEKVPFKTGMEEKLRALIQVATTTETSYFA-----------KNLVPSQQALVIDTYALSAILKYELQDLMLVLCRSCVSVICARVSPRQKAMVVEMVKKADPRAQTLSIGDGANDVPMLQAAHVGVGIFGLEGQQAVNNSDYSIGQFRFLRNLLFVHGRFNYRRIAT 923

The following BLAST results are available for this feature:

BLAST of NO08G02790.2 vs.

BLAST of NO08G02790.2 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
EWM26586.1	0.000e+0	75.78	aminophospholipid transporter- class type member 2...	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO08G02790	NO08G02790	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO08G02790.2	NO08G02790.2-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO08G02790.2.cds1	NO08G02790.2.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO08G02790.2.cds2	NO08G02790.2.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO08G02790.2.cds3	NO08G02790.2.cds3	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO08G02790.2.cds4	NO08G02790.2.cds4	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO08G02790.2.cds5	NO08G02790.2.cds5	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr8:784274..790435-
coding sequence from alignment at chr8:784274..790435-

mRNA sequence

>NO08G02790.2 ID=NO08G02790.2|Name=NO08G02790.2|organism=Nannochloropsis oceanica|type=mRNA|length=5409bp
CCTCCACCCCCTTCGCCTCCTCCACCTCCTTCCCCTCCTCCTCCTCCTCC
ACCTCCTTCTCCATCACCTCCTCCTTCTCCTCTTTCTCCTTCTGTCCTTC
TCGCAATAGGGTTCAGGCGCTGCCCACAATCGAGGTGAACCTTTGTCGTC
AGGTGCTCGGGTACATACACTGTTCTGTAGTACCTTTCGCACACCCGGAG
CACCCTCTTCACCGGAACGCTCACCTCTCCCTTGCCTGTGTGCGGGAAAA
TCGCCGCCCCATACGCGATAATGGGCTTCGCCTGCCCTGGCCCCGTCAAG
CCCGCAAAAAAATCATCCAAGACCTTCTGCTTCCCCGCATACACCGCCAT
ATGCGCACGCGCCCGTTTCTTTTCATACCTGGCATCCCACAATCGGTGGT
AATGCCGTACGATCAGCTCCCTGTAAGCGCTACGCAAGTCGGGACAACAG
GACTTCATCGTGGTCCTCGAAAAGGCGGCATTGATGTCACCGAGTGCGTC
CTCCCAAGAGCTAAACTTTCTCTTGCACTCGTTGATCCGCCCCTTTTCGT
AGTACGCACGACGCGTCAAGGTCTTGATCTTGCCCGTCTGCGAGTCCAAC
GCCGTGACCAGGTTGACGCGACCGGGATCGATCGCGACAATGCGTCGCTC
TCTGACTGGCTGCAGGTTTTCCTGTCCCTGCTGACGTTCCAACATCTCCT
TCTCCTCGTCCTCCTTTTCCACTCTGACCCTCTCCGCTTTCTCCCTCTCC
AGTCTCTCCTTCGCCACGTGGAAGAAGACCGACACCGAGACACCATCCGT
GGAAACCCGATTATGAAACACCCGCTGGTTTCGTAGGTTCCCCACCTGAA
AAGTCTCGTCCCACATCTCCTTCACCGAAACCGCATCCTGGCAAAACTTT
TTGGTGTCCATCCCTCCCAGTCGCTTCAACCAATCGGGGCATGCTTCGCT
CCATGCCTCCTTGGTCATCGCTGTGGGTCTGCGTCGCACCACGTTCTTCA
GCAGATCACTGAGAGCTCTGGTATCGAGCTTCGATCCCTAGGTACTCGCT
GAAAACCGAGCTACAACAGCGAGGAGGGGTGCTCCTGCTTTGTGTTTGAT
CTAATTAGACATAAACACGACCCCGGGTACATTTATAGACCTCTTTTCTT
CGCACCCAACACATCACGGGCTTAAGGGCCGGTGCCAGGGCTGTTCCCTT
TCTGTGCCCCGCAGCCCTGCGCTTTTTAAACTGCAGCAAGCGAGCCCCAA
ATGAGCATTCATGATAGCAGCACGGGGCTCCTTTCTAGTATGGCGTCGAT
GCGTCGAGCATTGAGTCTTAGGCGTACGGAGTCTGCGACCGCCGACCCCG
TCCATCGTGTTGTCGTTGTGGGAGACGAGGAGGAGAACAAGACCAAGCTT
CAGAAAGAGCCCCACCGCGCGGGACCGCCGCACACCGGGCCAGGAACCCA
AACAAATGAGGTTATTACTTCCATATATACGCTTTACTCCTTCTTGCCGC
TGAACCTGCGGCGGCAAATGAGTCGAGCGGCCAACATCTACTTCCTTTGC
ATCTCAATCTTGCAGTGTATCAAAGCCGTGAGCATCACCTCAGGGGTCCC
GACCACTGCTTTGCCCCTCGCATTCGTTCTCTTCGTCACTGCCGTCAAAG
ATGCCATCGAAGATTTCAACCGGCACAAAGCCGACGCCACAGAAAACAAT
CGCCTGGGCCACGTCCTATTAAAGGAAAAGCACTTTGACCTCCACCACCC
TCATCCGACCATGTGGTGCGACATCAAAGTAGGCGACGTAGTGGTCATAA
AGAATCGCGAGCTCATCCCTGCAGATATAGTCCTTCTCGCATCCTCCGAG
CCCAGCGGACTCGCCTTTGTCATGACTGCGAACCTCGACGGCGAAACCAA
CCTCAAGGCCAAGGAAGTCCATCAGGAACTACGGCAACTCCCCCTCCCCG
CCAAGCTCGCCGGCGCTACAGTCGTCTGTGATCTGCCTAACAATAATCTG
GAGCATTTTGAGGGATTGTATACGTTGGGTCCGGAGGCGGGGGAAAGGAA
AGTGCCTCTGACGCAACGCAATATACTACTGAGAGGCTGCATGTTGCGGA
ATACGAATTGGGCGGTGGGTGTGGTGGTTTACACGGGGAAGGAGACCAAG
ATTCAAATGAATACTGCGGAGGCCACTCAAAAGATTGGAAGTGTGCGGCG
ATTCGTGGATCGGGAGACGGTGATGGTGTTTGGATTGCAGGTGTTGTGTT
GTTTGTGTGCGGCGGTGGTGGGTGGGATCTATGTAGGGAGAGGAGGGCAG
ATGCCTTACCTGTGGGTGGGCGCCAGATTACCTGACCCGGCCTTGTCCGG
ATTCATTCAGTTCTGGACGTACACTGTGCTATTTTCGAACATGTTGCCGA
TATCCCTGCTTGTAACGCTTGATATGGTCAAGTTCCTTCAAGGAATGTGG
ATGTCATGGGACTTGAGCATGTACCACGAGACCCGCGACCCAGACGGTAA
CCTAATCGAGATCCCCTGTGTCGTGCGATCCTCCGACTTAAACGAAGAAC
TAGGAGTGATCGAGCACGTGTTCAGCGATAAGACAGGCACATTGACTTGC
AATATAATGGAGTTTTCGAAATGTACAATTGGTGGGGTGAGCTATGGGCT
AGGTTTGACGCAGATAGGGCGGGCATTCCGTGAGAGGAATGGCATGGAGA
TCGTCGAACCGCCGTTACGAGATCCCGAGGAGCCGGTGACACCGTTTGTG
AATATAATCGACCCGGCCTTGGTGGCTGTGATGAAGGATGAGATGCATCC
TAACCACAACAAGTGCCGCGATTTCTGGCTGGCCCTCGCCCTCAATCACG
ATGTCATGCCCGAGGGACCGGAAGACAGATTGGTCTACAGCGGTTCCAGC
CCCGACGAAACCGCCTTGGTCTACGCGGCGAAGCACCACGGCTTCTTCTT
CACGGCTCGGGAGCCAGGGAAGGTCACGGTAAAGGTAAAAGGGAAACCAA
TCGACTTCAACGTGTTGCATGTGTTGGAGTTTACGAGTGATAGGAAGAAA
AGTTCGGTGGTCTTGCGGAGGGAGAATGGAAGTATTGTCTTGTTCTGTAA
GGGCGCGGATAACATAATTAAGAGTCGATTAAGCTCCACGTTGAATTCCC
CCACCGAAATGGCGGGAATAGATGCTGATATCGCTCAGTATGTGAATGAT
GGCCTGCGGACTTTACTGCTTGCCAAGGCGGAGTTGACCGCGGAGCAGTA
TGAAGATTGGGCCAGGAGGTATCATGAGGCAGAGACAAGTTTCAAAGATA
GGGATGCGAAGAGGTATGCCCTGATGGAAGAGCTGGAGAGGGAGTTGGAG
ATGATGGGAATTACGGCGATCGAGGATAAGCTACAGGAAGGTGTGCCGGA
GACGATCTCAGCCTTGAGGCAAGCGGGGATTAAGGTTTGGGTTCTGACCG
GTGATAAGGTCGATACTGCGATAAATATCGGGCATAGTTGCCAGCTACTT
TCGACAGAGATGAGGTTCTTGAGACTGTGTGGGGAGGATGGGAAGATGGT
GTTGGATAAGCAGAAGGTCCCTTTGAAGGAGCCGATCCAAGAGGAAATGC
GATCCATGGTGGAGGCTGAGACGAAGGCAGCCGCTGCTGTCGCCGCAGCA
GCAGCAGGCGGCGGAGGAAAAAGGAAAGGGAAAGAGGGAAAACTGCCTCC
GCGAGCATTGATAGTTGATACGTATGCTTTGGCAGCTATCTTGAAATACG
AACTGCAGGACCTGATGCTGGCTCTTTGTCATTTGTGTGTTTCCATCGTG
TGTGCACGTGTTTCCCCCCGGCAGAAAGCCTTGGTTGTGGAGATGGTTAA
AAAGGCTGATCCCTCTGTGCAGACGCTTTCGATAGGTGATGGCGCCAACG
ACGTCCCCATGCTCCAAGCCGCGCACGTGGGCGTGGGCATCTTTGGGCTG
GAAGGACAACAGGCCGTCAACAACAGCGATTACGCTATAGGGCAATTCCG
CTTTCTTGGGGATCTGCTCCTCGTCCATGGTCGGTTCAACTACCGGCGTA
TCGCAACCGGTGTGTTGGGGGGTTTGTTTTCCTCTCCTTACAATGACTTG
TCCGACGAAGGCGTGTAACGGTGCTGACCCCTCCATGCCCTCCCCTTCTC
TCTTTCTCCCTCCCAGTGGTCAAGTACATCTTCTACAAGTCCGCCGTGCT
GGTCCTGCCTCAATTCTTCTTCGGTATTGAATCGCTCTTTTCGGGCCAGC
CTATCTATCAGGACATCATCTACCAGCTTGCTAATGTGTTGTTCACTGCA
TTTCCCATAATTGCTTTCGGGGTCTTTGATCGCGACGTGCCCGTGAAGCA
AGCTTTAGCGTCGCCGGGCCTTTACAAAGACGGGATTGAACGGAAGTTTT
TGAATCGCCATGTGTTTTGGGCATGGATGCTGGAAGCGATTTTACATGCA
CTTTTGATCATCTTCTTGCCCATGTTGGCTTTGGGTTATTTCAACGTGTT
ACCAACGGCGGAGAGCGTGAGCATATGGGAGCTCGGCACCATTGTGTTCC
TCTCTTTCTTGACGGTGGTTTCCTTGCGGCTGGCCGTTGAAGTGTTAGAA
TGGCAGGTTCTCATCTCTGTTCTCATCATTGTTTCTCTACTCTTCTGGTG
GCTGGCGTGGGCGGTGTTAAATTTTATGCTTGCCCTCGCTCCTTCTATAT
ATGGGTCCTTCCTGGTATTTCCTGACAGTAGTCGCTTTTGGTTTGTTTAT
TTGTTGGCCACCATGGCGTGTTTCGTGACCATGTTTGCAGTGGAGGGGGT
ATCGGTCCTGTGGCATCCGTTGCGGAGCCAGCTGATCCGGGAGCGGTTGG
CAGAATTTGGGCTTGAAAAGGATCCTGGAGGAGACAAGGGTGGTCATTGT
GCGGCCACTGAAAACCGAAGCATCAGTAATGGGAATGGGTATGCGGCGGC
AGTGATGGTGCCGGTGGAACAGGAACAGGAGGAAGGGCGTGTGGGTTTGA
CCAAGGCAGCCGAAAAAGTCTGGGGCCTACAAACATGGGCAAGAACTGCA
CCAGCACCAGCACCAGCACCAGCACCAGCACCAGCACTAGTATTGAAAGC
AGCAGCGGGGCACAGTGATGGCGGAGATGCCGCTGGAGCAGGCATCCGCG
AAGGAGAACGACTTATGGACGATTGAATCACTGCCATCTAGATCTGAAAC
AAAAGAAAGTGCATCAAACGAATGACCCAATGAGGTGAGTAGAGTGACCG
AATGAGGTGTGCGTGGAGAAATGCATACGTGTGTATGAACAAATCAGGAA
AGCAACCATTGGCAATGACAAGTGAGAGGGGAGGCATTATGGGATAGATT
TGCCAGGATTTGCATGGTAATAAAAATATAGCACTAAATGACATGGTTGA
CAACGGTCA

protein sequence of NO08G02790.2

>NO08G02790.2-protein ID=NO08G02790.2-protein|Name=NO08G02790.2|organism=Nannochloropsis oceanica|type=polypeptide|length=956bp
MSIHDSSTGLLSSMASMRRALSLRRTESATADPVHRVVVVGDEEENKTKL
QKEPHRAGPPHTGPGTQTNEVITSIYTLYSFLPLNLRRQMSRAANIYFLC
ISILQCIKAVSITSGVPTTALPLAFVLFVTAVKDAIEDFNRHKADATENN
RLGHVLLKEKHFDLHHPHPTMWCDIKVGDVVVIKNRELIPADIVLLASSE
PSGLAFVMTANLDGETNLKAKEVHQELRQLPLPAKLAGATVVCDLPNNNL
EHFEGLYTLGPEAGERKVPLTQRNILLRGCMLRNTNWAVGVVVYTGKETK
IQMNTAEATQKIGSVRRFVDRETVMVFGLQVLCCLCAAVVGGIYVGRGGQ
MPYLWVGARLPDPALSGFIQFWTYTVLFSNMLPISLLVTLDMVKFLQGMW
MSWDLSMYHETRDPDGNLIEIPCVVRSSDLNEELGVIEHVFSDKTGTLTC
NIMEFSKCTIGGVSYGLGLTQIGRAFRERNGMEIVEPPLRDPEEPVTPFV
NIIDPALVAVMKDEMHPNHNKCRDFWLALALNHDVMPEGPEDRLVYSGSS
PDETALVYAAKHHGFFFTAREPGKVTVKVKGKPIDFNVLHVLEFTSDRKK
SSVVLRRENGSIVLFCKGADNIIKSRLSSTLNSPTEMAGIDADIAQYVND
GLRTLLLAKAELTAEQYEDWARRYHEAETSFKDRDAKRYALMEELERELE
MMGITAIEDKLQEGVPETISALRQAGIKVWVLTGDKVDTAINIGHSCQLL
STEMRFLRLCGEDGKMVLDKQKVPLKEPIQEEMRSMVEAETKAAAAVAAA
AAGGGGKRKGKEGKLPPRALIVDTYALAAILKYELQDLMLALCHLCVSIV
CARVSPRQKALVVEMVKKADPSVQTLSIGDGANDVPMLQAAHVGVGIFGL
EGQQAVNNSDYAIGQFRFLGDLLLVHGRFNYRRIATGVLGGLFSSPYNDL
SDEGV*

mRNA from alignment at chr8:784274..790435-

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO08G02790.2 ID=NO08G02790.2|Name=NO08G02790.2|organism=Nannochloropsis oceanica|type=mRNA|length=6162bp|location=Sequence derived from alignment at chr8:784274..790435- (Nannochloropsis oceanica)
CCTCCACCCCCTTCGCCTCCTCCACCTCCTTCCCCTCCTCCTCCTCCTCC
ACCTCCTTCTCCATCACCTCCTCCTTCTCCTCTTTCTCCTTCTGTCCTTC
TCGCAATAGGGTTCAGGCGCTGCCCACAATCGAGGTGAACCTTTGTCGTC
AGGTGCTCGGGTACATACACTGTTCTGTAGTACCTTTCGCACACCCGGAG
CACCCTCTTCACCGGAACGCTCACCTCTCCCTTGCCTGTGTGCGGGAAAA
TCGCCGCCCCATACGCGATAATGGGCTTCGCCTGCCCTGGCCCCGTCAAG
CCCGCAAAAAAATCATCCAAGACCTTCTGCTTCCCCGCATACACCGCCAT
ATGCGCACGCGCCCGTTTCTTTTCATACCTGGCATCCCACAATCGGTGGT
AATGCCGTACGATCAGCTCCCTGTAAGCGCTACGCAAGTCGGGACAACAG
GACTTCATCGTGGTCCTCGAAAAGGCGGCATTGATGTCACCGAGTGCGTC
CTCCCAAGAGCTAAACTTTCTCTTGCACTCGTTGATCCGCCCCTTTTCGT
AGTACGCACGACGCGTCAAGGTCTTGATCTTGCCCGTCTGCGAGTCCAAC
GCCGTGACCAGGTTGACGCGACCGGGATCGATCGCGACAATGCGTCGCTC
TCTGACTGGCTGCAGGTTTTCCTGTCCCTGCTGACGTTCCAACATCTCCT
TCTCCTCGTCCTCCTTTTCCACTCTGACCCTCTCCGCTTTCTCCCTCTCC
AGTCTCTCCTTCGCCACGTGGAAGAAGACCGACACCGAGACACCATCCGT
GGAAACCCGATTATGAAACACCCGCTGGTTTCGTAGGTTCCCCACCTGAA
AAGTCTCGTCCCACATCTCCTTCACCGAAACCGCATCCTGGCAAAACTTT
TTGGTGTCCATCCCTCCCAGTCGCTTCAACCAATCGGGGCATGCTTCGCT
CCATGCCTCCTTGGTCATCGCTGTGGGTCTGCGTCGCACCACGTTCTTCA
GCAGATCACTGAGAGCTCTGGTATCGAGCTTCGATCCCTAGGTACTCGCT
GAAAACCGAGCTACAACAGCGAGGAGGGGTGCTCCTGCTTTGTGTTTGAT
CTAATTAGACATAAACACGACCCCGGGTACATTTATAGACCTCTTTTCTT
CGCACCCAACACATCACGGGCTTAAGGGCCGGTGCCAGGGCTGTTCCCTT
TCTGTGGTAGGTGCCTGCCTTCAAAGTTTGCTGGGTAAAACTGCGGTCAT
CATTCGTCCCTCATATTCGCCGCATCCACAGCCCCGCAGCCCTGCGCTTT
TTAAACTGCAGCAAGCGAGCCCCAAATGAGCATTCATGATAGCAGCACGG
GGCTCCTTTCTAGTATGGCGTCGATGCGTCGAGCATTGAGTCTTAGGCGT
ACGGAGTCTGCGACCGCCGACCCCGTCCATCGTGTTGTCGTTGTGGGAGA
CGAGGAGGAGAACAAGACCAAGCTTCAGAAAGAGCCCCACCGCGCGGGAC
CGCCGCACACCGGGCCAGGAACCCAAACAAATGAGGTTATTACTTCCATA
TATACGCTTTACTCCTTCTTGCCGCTGAACCTGCGGCGGCAAATGAGTCG
AGCGGCCAACATCTACTTCCTTTGCATCTCAATCTTGCAGTGTATCAAAG
CCGTGAGCATCACCTCAGGGGTCCCGACCACTGCTTTGCCCCTCGCATTC
GTTCTCTTCGTCACTGCCGTCAAAGATGCCATCGAAGATTTCAACCGGCA
CAAAGCCGACGCCACAGAAAACAATCGCCTGGGCCACGTCCTATTAAAGG
AAAAGCACTTTGACCTCCACCACCCTCATCCGACCATGTGGTGCGACATC
AAAGTAGGCGACGTAGTGGTCATAAAGAATCGCGAGCTCATCCCTGCAGA
TATAGTCCTTCTCGCATCCTCCGAGCCCAGCGGACTCGCCTTTGTCATGA
CTGCGAACCTCGACGGCGAAACCAACCTCAAGGCCAAGGAAGTCCATCAG
GAACTACGGCAACTCCCCCTCCCCGCCAAGCTCGCCGGCGCTACAGTCGT
CTGTGATCTGCCTAACAATAATCTGGAGCATTTTGAGGGATTGTATACGT
TGGGTCCGGAGGCGGGGGAAAGGAAAGTGCCTCTGACGCAACGCAATATA
CTACTGAGAGGCTGCATGTTGCGGAATACGAATTGGGCGGTGGGTGTGGT
GGTTTACACGGGGAAGGAGACCAAGATTCAAATGAATACTGCGGAGGCCA
CTCAAAAGATTGGAAGTGTGCGGCGATTCGTGGATCGGGAGACGGTGATG
GTGTTTGGATTGCAGGTGTTGTGTTGTTTGTGTGCGGCGGTGGTGGGTGG
GATCTATGTAGGGAGAGGAGGGCAGATGCCTTACCTGTGGGTGGGCGCCA
GATTACCTGACCCGGCCTTGTCCGGATTCATTCAGTTCTGGACGTACACT
GTGCTATTTTCGAACATGTTGCCGATATCCCGTGAGTAGTTTTAAACGGG
GGGGTCCGGAGATGGAAGAGGGGGAAGGGGAGGGAAAATGAATGGGGGAT
GACTTTGTTTGGCTTGTTGTCATTACCCTTTTCCCTCACTCCTATGTACG
CATCGAGATTATGCCAGTGCGTTCAGTTGTGTCATTTTAAAACCCAATCA
GTGACAGCTCTCACGTACGCATTCTTTTCTTTCCCTCCTTTCCTCCCCCC
CTCTAACCCTCCCCCATCTCCAAGTGCTTGTAACGCTTGATATGGTCAAG
TTCCTTCAAGGAATGTGGATGTCATGGGACTTGAGGTAATAAGAAGAAAG
GGAGAAAAGGGCGGGGGAGACAGGAGAGAGGAGGTGGCACACCCTTCTCA
AAAAAGCACTACTCACGTCCCTCCCTCCCTCCCTTCCGCCCTCCCTCAGC
ATGTACCACGAGACCCGCGACCCAGACGGTAACCTAATCGAGATCCCCTG
TGTCGTGCGATCCTCCGACTTAAACGAAGAACTAGGAGTGATCGAGCACG
TGTTCAGCGATAAGACAGGCACATTGACTTGCAATATAATGGAGTTTTCG
AAATGTACAATTGGTGGGGTGAGCTATGGGCTAGGTTTGACGCAGATAGG
GCGGGCATTCCGTGAGAGGAATGGCATGGAGATCGTCGAACCGCCGTTAC
GAGATCCCGAGGAGCCGGTGACACCGTTTGTGAATATAATCGACCCGGCC
TTGGTGGCTGTGATGAAGGATGAGGTGGGTTTGGGAAGGAAGGAGGAAGG
ACGGGAGGGTGGTGGTGAGCGTGGCTCCCGGCGTGCGACTCAATCCTCAA
GAGCAGCTGTTGTCTCTCCCAGGCGCTGGTCTCAAGAGCATGCAAACCAT
TTCCAGATCGACGTATTCTACCCTCCCTCTCTCACTTTCTCCCTCCCCTA
CCAATACAGATGCATCCTAACCACAACAAGTGCCGCGATTTCTGGCTGGC
CCTCGCCCTCAATCACGATGTCATGCCCGAGGGACCGGAAGACAGATTGG
TCTACAGCGGTTCCAGCCCCGACGAAACCGCCTTGGTCTACGCGGCGAAG
CACCACGGCTTCTTCTTCACGGCTCGGGAGCCAGGGAAGGTCACGGTAAA
GGTAAAAGGGAAACCAATCGACTTCAACGTGTTGCATGTGTTGGAGTTTA
CGAGTGATAGGAAGAAAAGTTCGGTGGTCTTGCGGAGGGAGAATGGAAGT
ATTGTCTTGTTCTGTAAGGGCGCGGATAACATAATTAAGAGTCGATTAAG
CTCCACGTTGAATTCCCCCACCGAAATGGCGGGAATAGATGCTGATATCG
CTCAGTATGTGAATGATGGCCTGCGGACTTTACTGCTTGCCAAGGCGGAG
TTGACCGCGGAGCAGTATGAAGATTGGGCCAGGAGGTATCATGAGGCAGA
GACAAGTTTCAAAGATAGGGATGCGAAGAGGTATGCCCTGATGGAAGAGC
TGGAGAGGGAGTTGGAGATGATGGGAATTACGGCGATCGAGGATAAGCTA
CAGGAAGGTGTGCCGGAGACGATCTCAGCCTTGAGGCAAGCGGGGATTAA
GGTTTGGGTTCTGACCGGTGATAAGGTCGATACTGCGATAAATATCGGGC
ATAGTTGCCAGCTACTTTCGACAGAGATGAGGTTCTTGAGACTGTGTGGG
GAGGATGGGAAGATGGTGTTGGATAAGCAGAAGGTCCCTTTGAAGGAGCC
GATCCAAGAGGAAATGCGATCCATGGTGGAGGCTGAGACGAAGGCAGCCG
CTGCTGTCGCCGCAGCAGCAGCAGGCGGCGGAGGAAAAAGGAAAGGGAAA
GAGGGAAAACTGCCTCCGCGAGCATTGATAGTTGATACGTATGCTTTGGC
AGCTATCTTGAAATACGAACTGCAGGACCTGATGCTGGCTCTTTGTCATT
TGTGTGTTTCCATCGTGTGTGCACGTGTTTCCCCCCGGCAGAAAGCCTTG
GTTGTGGAGATGGTTAAAAAGGCTGATCCCTCTGTGCAGACGCTTTCGAT
AGGTACGTTTATCGTGAGTTCTCCCTCATTTCGTCCCTTCTCGTTTTCTA
CCACCAGCATGACCACTTCAAGCATCACATCGTCTTGGCATGCCCCTCGT
TCATCCCCTTCCGTCCACCCTCTCTCAATCTGAACAAGGTGATGGCGCCA
ACGACGTCCCCATGCTCCAAGCCGCGCACGTGGGCGTGGGCATCTTTGGG
CTGGAAGGACAACAGGCCGTCAACAACAGCGATTACGCTATAGGGCAATT
CCGCTTTCTTGGGGATCTGCTCCTCGTCCATGGTCGGTTCAACTACCGGC
GTATCGCAACCGGTGTGTTGGGGGGTTTGTTTTCCTCTCCTTACAATGAC
TTGTCCGACGAAGGCGTGTAACGGTGCTGACCCCTCCATGCCCTCCCCTT
CTCTCTTTCTCCCTCCCAGTGGTCAAGTACATCTTCTACAAGTCCGCCGT
GCTGGTCCTGCCTCAATTCTTCTTCGGTATTGAATCGCTCTTTTCGGGCC
AGCCTATCTATCAGGACATCATCTACCAGCTTGCTAATGTGTTGTTCACT
GCATTTCCCATAATTGCTTTCGGGGTCTTTGATCGCGACGTGCCCGTGAA
GCAAGCTTTAGCGTCGCCGGGCCTTTACAAAGACGGGATTGAACGGAAGT
TTTTGAATCGCCATGTGTTTTGGGCATGGATGCTGGAAGCGATTTTACAT
GCACTTTTGATCATCTTCTTGCCCATGTTGGCTTTGGGTTATTTCAACGT
GTTACCAACGGCGGAGAGCGTGAGCATATGGGAGCTCGGCACCATTGTGT
TCCTCTCTTTCTTGACGGTGGTTTCCTTGCGGCTGGCCGTTGAAGTGTTA
GAATGGCAGGTTCTCATCTCTGTTCTCATCATTGTTTCTCTACTCTTCTG
GTGGCTGGCGTGGGCGGTGTTAAATTTTATGCTTGCCCTCGCTCCTTCTA
TATATGGGTCCTTCCTGGTATTTCCTGACAGTAGTCGCTTTTGGTTTGTT
TATTTGTTGGCCACCATGGCGTGTTTCGTGACCATGTTTGCAGTGGAGGG
GGTATCGGTCCTGTGGCATCCGTTGCGGAGCCAGCTGATCCGGGAGCGGT
TGGCAGAATTTGGGCTTGAAAAGGATCCTGGAGGAGACAAGGGTGGTCAT
TGTGCGGCCACTGAAAACCGAAGCATCAGTAATGGGAATGGGTATGCGGC
GGCAGTGATGGTGCCGGTGGAACAGGAACAGGAGGAAGGGCGTGTGGGTT
TGACCAAGGCAGCCGAAAAAGTCTGGGGCCTACAAACATGGGCAAGAACT
GCACCAGCACCAGCACCAGCACCAGCACCAGCACCAGCACTAGTATTGAA
AGCAGCAGCGGGGCACAGTGATGGCGGAGATGCCGCTGGAGCAGGCATCC
GCGAAGGAGAACGACTTATGGACGATTGAATCACTGCCATCTAGATCTGA
AACAAAAGAAAGTGCATCAAACGAATGACCCAATGAGGTGAGTAGAGTGA
CCGAATGAGGTGTGCGTGGAGAAATGCATACGTGTGTATGAACAAATCAG
GAAAGCAACCATTGGCAATGACAAGTGAGAGGGGAGGCATTATGGGATAG
ATTTGCCAGGATTTGCATGGTAATAAAAATATAGCACTAAATGACATGGT
TGACAACGGTCA

Coding sequence (CDS) from alignment at chr8:784274..790435-

>NO08G02790.2 ID=NO08G02790.2|Name=NO08G02790.2|organism=Nannochloropsis oceanica|type=CDS|length=2868bp|location=Sequence derived from alignment at chr8:784274..790435- (Nannochloropsis oceanica)
ATGAGCATTCATGATAGCAGCACGGGGCTCCTTTCTAGTATGGCGTCGAT
GCGTCGAGCATTGAGTCTTAGGCGTACGGAGTCTGCGACCGCCGACCCCG
TCCATCGTGTTGTCGTTGTGGGAGACGAGGAGGAGAACAAGACCAAGCTT
CAGAAAGAGCCCCACCGCGCGGGACCGCCGCACACCGGGCCAGGAACCCA
AACAAATGAGGTTATTACTTCCATATATACGCTTTACTCCTTCTTGCCGC
TGAACCTGCGGCGGCAAATGAGTCGAGCGGCCAACATCTACTTCCTTTGC
ATCTCAATCTTGCAGTGTATCAAAGCCGTGAGCATCACCTCAGGGGTCCC
GACCACTGCTTTGCCCCTCGCATTCGTTCTCTTCGTCACTGCCGTCAAAG
ATGCCATCGAAGATTTCAACCGGCACAAAGCCGACGCCACAGAAAACAAT
CGCCTGGGCCACGTCCTATTAAAGGAAAAGCACTTTGACCTCCACCACCC
TCATCCGACCATGTGGTGCGACATCAAAGTAGGCGACGTAGTGGTCATAA
AGAATCGCGAGCTCATCCCTGCAGATATAGTCCTTCTCGCATCCTCCGAG
CCCAGCGGACTCGCCTTTGTCATGACTGCGAACCTCGACGGCGAAACCAA
CCTCAAGGCCAAGGAAGTCCATCAGGAACTACGGCAACTCCCCCTCCCCG
CCAAGCTCGCCGGCGCTACAGTCGTCTGTGATCTGCCTAACAATAATCTG
GAGCATTTTGAGGGATTGTATACGTTGGGTCCGGAGGCGGGGGAAAGGAA
AGTGCCTCTGACGCAACGCAATATACTACTGAGAGGCTGCATGTTGCGGA
ATACGAATTGGGCGGTGGGTGTGGTGGTTTACACGGGGAAGGAGACCAAG
ATTCAAATGAATACTGCGGAGGCCACTCAAAAGATTGGAAGTGTGCGGCG
ATTCGTGGATCGGGAGACGGTGATGGTGTTTGGATTGCAGGTGTTGTGTT
GTTTGTGTGCGGCGGTGGTGGGTGGGATCTATGTAGGGAGAGGAGGGCAG
ATGCCTTACCTGTGGGTGGGCGCCAGATTACCTGACCCGGCCTTGTCCGG
ATTCATTCAGTTCTGGACGTACACTGTGCTATTTTCGAACATGTTGCCGA
TATCCCTGCTTGTAACGCTTGATATGGTCAAGTTCCTTCAAGGAATGTGG
ATGTCATGGGACTTGAGCATGTACCACGAGACCCGCGACCCAGACGGTAA
CCTAATCGAGATCCCCTGTGTCGTGCGATCCTCCGACTTAAACGAAGAAC
TAGGAGTGATCGAGCACGTGTTCAGCGATAAGACAGGCACATTGACTTGC
AATATAATGGAGTTTTCGAAATGTACAATTGGTGGGGTGAGCTATGGGCT
AGGTTTGACGCAGATAGGGCGGGCATTCCGTGAGAGGAATGGCATGGAGA
TCGTCGAACCGCCGTTACGAGATCCCGAGGAGCCGGTGACACCGTTTGTG
AATATAATCGACCCGGCCTTGGTGGCTGTGATGAAGGATGAGATGCATCC
TAACCACAACAAGTGCCGCGATTTCTGGCTGGCCCTCGCCCTCAATCACG
ATGTCATGCCCGAGGGACCGGAAGACAGATTGGTCTACAGCGGTTCCAGC
CCCGACGAAACCGCCTTGGTCTACGCGGCGAAGCACCACGGCTTCTTCTT
CACGGCTCGGGAGCCAGGGAAGGTCACGGTAAAGGTAAAAGGGAAACCAA
TCGACTTCAACGTGTTGCATGTGTTGGAGTTTACGAGTGATAGGAAGAAA
AGTTCGGTGGTCTTGCGGAGGGAGAATGGAAGTATTGTCTTGTTCTGTAA
GGGCGCGGATAACATAATTAAGAGTCGATTAAGCTCCACGTTGAATTCCC
CCACCGAAATGGCGGGAATAGATGCTGATATCGCTCAGTATGTGAATGAT
GGCCTGCGGACTTTACTGCTTGCCAAGGCGGAGTTGACCGCGGAGCAGTA
TGAAGATTGGGCCAGGAGGTATCATGAGGCAGAGACAAGTTTCAAAGATA
GGGATGCGAAGAGGTATGCCCTGATGGAAGAGCTGGAGAGGGAGTTGGAG
ATGATGGGAATTACGGCGATCGAGGATAAGCTACAGGAAGGTGTGCCGGA
GACGATCTCAGCCTTGAGGCAAGCGGGGATTAAGGTTTGGGTTCTGACCG
GTGATAAGGTCGATACTGCGATAAATATCGGGCATAGTTGCCAGCTACTT
TCGACAGAGATGAGGTTCTTGAGACTGTGTGGGGAGGATGGGAAGATGGT
GTTGGATAAGCAGAAGGTCCCTTTGAAGGAGCCGATCCAAGAGGAAATGC
GATCCATGGTGGAGGCTGAGACGAAGGCAGCCGCTGCTGTCGCCGCAGCA
GCAGCAGGCGGCGGAGGAAAAAGGAAAGGGAAAGAGGGAAAACTGCCTCC
GCGAGCATTGATAGTTGATACGTATGCTTTGGCAGCTATCTTGAAATACG
AACTGCAGGACCTGATGCTGGCTCTTTGTCATTTGTGTGTTTCCATCGTG
TGTGCACGTGTTTCCCCCCGGCAGAAAGCCTTGGTTGTGGAGATGGTTAA
AAAGGCTGATCCCTCTGTGCAGACGCTTTCGATAGGTGATGGCGCCAACG
ACGTCCCCATGCTCCAAGCCGCGCACGTGGGCGTGGGCATCTTTGGGCTG
GAAGGACAACAGGCCGTCAACAACAGCGATTACGCTATAGGGCAATTCCG
CTTTCTTGGGGATCTGCTCCTCGTCCATGGTCGGTTCAACTACCGGCGTA
TCGCAACCGGTGTGTTGGGGGGTTTGTTTTCCTCTCCTTACAATGACTTG
TCCGACGAAGGCGTGTAA

Synonyms

Publications