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Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
chr8 | genome | chr8:741851..743718 + |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
BLAST of NO08G02640.1 vs.
Match: OUX66820.1 (enoyl-ACP reductase [Oceanospirillaceae bacterium TMED276]) HSP 1 Score: 423.3 bits (1087), Expect = 7.300e-115 Identity = 216/344 (62.79%), Postives = 270/344 (78.49%), Query Frame = 0
Query: 1 MQTRVTRLFKIQYPIVLPGMSWISKPKLVAAVCNAGGLGILASGPLSAVETAVAIKEIRSLTDKPFGIGTTLMMPGAKENATVALEEEVPVINYSLGKGDWLVQRAHAYGGKVIATVTSVKHAKSAKSSGADALLVTGHEAAAHGGDVTSLVLIPSIAANVPDLPLIAAGGFGDGRGLLAALSLGADAVAMGTRFACTEESPLHENVKKAITSDGQTESSTVYSKNIDGIWARVMKTPFAAEAASKRANPLVVAIEALKQAKRFGVNPLKVLPGLFMEPDKIYMLAQFGGATRKFELATIEGDLEKGIQFVGQVQGLIHDVPTVQALVTRVLAEAAGIHAKQHQ 345
M+TR+T L I+ P++LPGMSWIS P+LVAAV NAGGLGILASGPL+ ET AI+EIR LTDKPFG+G TL+MPGAKENA +ALEE+VPVIN+SLGKGDWLV++AH YGGKVIATV S KHA SA+S GADALLVTGHEAAAHGGDVTSLVL+PSIA+ V D+P+IA GGF D RGL+AALSLGA+AVAMG+RFA + +SPLH +VK+ + ++E T+YSKN DG+WARVMKTP + + + N ++ IEA K AK K++ G+ + DKI +LA FG + + + ATI GDL+KG+QF+GQ QGLI D+PTVQ LV R+LA+A +H ++
Sbjct: 1 MKTRITELLGIEAPLILPGMSWISTPQLVAAVSNAGGLGILASGPLTPEETRAAIREIRELTDKPFGVGVTLLMPGAKENAMIALEEKVPVINFSLGKGDWLVKKAHEYGGKVIATVVSEKHALSAQSIGADALLVTGHEAAAHGGDVTSLVLVPSIASKV-DIPVIATGGFADARGLMAALSLGAEAVAMGSRFATSADSPLHNHVKETVIK--KSEQETIYSKNFDGLWARVMKTPRSVKETKRPMNLIIAGIEATKAAKIVKQPVWKIMLGMMVMLDKIKLLAYFGASVPRLQAATINGDLDKGVQFIGQTQGLIEDIPTVQELVDRILADAKAMHESNNR 341
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO08G02640.1 ID=NO08G02640.1|Name=NO08G02640.1|organism=Nannochloropsis oceanica|type=mRNA|length=1056bp ATGCAGACGCGCGTCACCCGGCTCTTTAAGATCCAATACCCAATTGTCCT CCCAGGCATGTCGTGGATCTCAAAGCCTAAACTAGTGGCTGCCGTGTGCA ATGCGGGCGGGCTAGGCATCCTCGCCTCAGGGCCTCTCTCGGCCGTCGAA ACGGCTGTAGCCATCAAGGAGATCCGCAGCCTCACAGACAAGCCCTTTGG GATTGGCACCACCCTTATGATGCCGGGCGCCAAGGAAAACGCGACAGTCG CCTTGGAAGAAGAGGTACCCGTCATCAATTACAGCCTGGGCAAGGGAGAC TGGCTGGTGCAAAGAGCCCACGCGTACGGTGGCAAGGTCATCGCAACCGT CACTTCGGTGAAGCATGCCAAGTCGGCGAAAAGCAGCGGTGCGGATGCCC TCCTTGTAACGGGACACGAAGCCGCTGCACATGGGGGGGACGTGACCTCC TTGGTATTAATTCCATCCATCGCGGCCAATGTACCGGACCTGCCGTTGAT CGCTGCAGGGGGATTCGGAGATGGAAGAGGCTTGCTGGCGGCTTTGTCCT TGGGAGCGGATGCAGTGGCGATGGGCACCCGATTTGCTTGCACGGAGGAG AGTCCATTGCATGAAAACGTGAAGAAGGCCATTACAAGTGATGGTCAAAC GGAAAGTAGCACGGTTTATTCCAAAAATATCGATGGGATATGGGCAAGGG TGATGAAGACGCCTTTCGCTGCAGAGGCGGCAAGTAAGCGGGCGAACCCT CTCGTTGTGGCGATCGAGGCTTTAAAGCAGGCGAAACGGTTCGGTGTCAA CCCACTCAAGGTTTTGCCGGGCCTGTTTATGGAGCCAGATAAAATTTACA TGCTGGCGCAGTTTGGAGGGGCGACGCGTAAGTTTGAGCTGGCGACGATT GAAGGTGATTTGGAAAAGGGCATTCAATTTGTGGGGCAGGTGCAAGGTCT GATTCACGATGTGCCCACGGTGCAAGCATTGGTAACACGGGTCCTGGCCG AGGCAGCGGGAATTCATGCCAAACAGCACCAGGAATTGTTTGGAAGGAGC GGGTGA back to topprotein sequence of NO08G02640.1 >NO08G02640.1-protein ID=NO08G02640.1-protein|Name=NO08G02640.1|organism=Nannochloropsis oceanica|type=polypeptide|length=352bp MQTRVTRLFKIQYPIVLPGMSWISKPKLVAAVCNAGGLGILASGPLSAVE TAVAIKEIRSLTDKPFGIGTTLMMPGAKENATVALEEEVPVINYSLGKGD WLVQRAHAYGGKVIATVTSVKHAKSAKSSGADALLVTGHEAAAHGGDVTS LVLIPSIAANVPDLPLIAAGGFGDGRGLLAALSLGADAVAMGTRFACTEE SPLHENVKKAITSDGQTESSTVYSKNIDGIWARVMKTPFAAEAASKRANP LVVAIEALKQAKRFGVNPLKVLPGLFMEPDKIYMLAQFGGATRKFELATI EGDLEKGIQFVGQVQGLIHDVPTVQALVTRVLAEAAGIHAKQHQELFGRS G* back to topmRNA from alignment at chr8:741851..743718+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO08G02640.1 ID=NO08G02640.1|Name=NO08G02640.1|organism=Nannochloropsis oceanica|type=mRNA|length=1868bp|location=Sequence derived from alignment at chr8:741851..743718+ (Nannochloropsis oceanica) ATGCAGACGCGCGTCACCCGGCTCTTTAAGATCCAATACCCAATTGTCCT
CCCAGGCATGTCGTGGATCTCAAAGCCTAAACTAGTGGCTGCCGTGTGCA
ATGCGGGCGGGCTAGGCATCCTCGCCTCAGGGCCTCTCTCGGCCGTCGAA
ACGGCTGTAGCCATCAAGGAGATCCGCAGCCTCACAGACAAGCCCTTTGG
GATTGGCACCACCCTTATGATGCCGGTAGGTTTGTTGGCACGAGCGCGAC
ACTACTCTTTCAGTCTATCCCTTTCTCCCTTCGACCTCCTTCGTCGGCCC
CTCATCCCTTCCTTCAAGTCTCCATGACTCCATGACGATGTTCTCCTACA
AGTCCTTGGAAGGGTTTTGCACTGTATACCCTTACCCTGCTGTTTTTTGT
TGTTTGTTTACCAGCTTTCGAATATCCTCTCTTTCCTTCAAAACAAAGTC
AACATACTTTGACGACAATGTCCTCCCTCATGTGCTCACAAAATTTCACA
TCCTGCCACTGCTCCTTCCTCTCTCCCAATCCATCATAATGATAGGGCGC
CAAGGAAAACGCGACAGTCGCCTTGGAAGAAGAGGTACCCGTCATCAATT
ACAGCCTGGGCAAGGGAGACTGGCTGGTGCAAAGAGCCCACGCGTACGGT
GGCAAGGTCATCGCAACCGTCACTTCGGTGAAGCATGGTGCGCCTTCCGT
GTTGGAGGGGGTGGGAGAGAGGGAAGGGTGACAGAAGCAACTATATTTCT
TTCCCCACAACTTCATCCCCGATTTCAATATACCCTTTTCAGGAGTTTCA
AGTCTTATTTGATCTCTTGCTCGATTTTCATGCATCGATCACTCCACGTA
CTCATCCTCTCCTTCCCCCTCCCTCCCTTTTCCCCAACAGCCAAGTCGGC
GAAAAGCAGCGGTGCGGATGCCCTCCTTGTAACGGGACACGAAGCCGCTG
CACATGGGGGGGACGTGACCTCCTTGGTATTAATTCCATCCATCGCGGCC
AATGTACCGGACCTGCCGTTGATCGCTGCAGGGGGATTCGGAGATGGAAG
AGGCTTGCTGGCGGCTTTGTCCTTGGGAGCGGATGCAGTGGCGATGGGCA
CCCGATTTGCTTGCACGGAGGAGAGTCCATTGCATGAAAACGTGAAGAAG
GCCATTACAAGTGATGGTCAAACGGAAAGTAGCACGGTTTATTCCAAAAA
TATCGATGGGATATGGGCAAGGGTGATGAAGACGCCTTTCGCTGCAGAGG
CGGCAAGTAAGCGGGCGAACCCTCTCGTTGTGGCGATCGAGGCTTTAAAG
CAGGCGAAACGGTTCGGTGTCAACCCACTCAAGGTTTTGCCGGGCCTGTT
TATGGAGCCAGATAAAATTTACATGCTGGCGCAGTTTGGAGGGGCGACGC
GTAAGTTTGAGCTGGCGACGGTGAGTGGGGATGGAGAGGTGGGGAGGGGG
AAGAGGGAGTGAGGGGTGGATGTGGGTGGGTGGATAGAGATGGGTTGGAG
CATGACATGCAACATAATGTAAGCTGGCGAGCTAGACGATGTGTACCCTC
TGTTACAGTGAGAGAGGAGGTATTGAGGAGGAGAAGAGTAAGTTTTAGGA
AGAAATACGTTCCTCATCCCCCCCTCATTTCCTCTTCATTTTTCAGATCA
ATTTTTACTAAGCGATCCCTCACCATCTCACTCTATCTCCTCCCTCCCCC
CCTAAATAGATTGAAGGTGATTTGGAAAAGGGCATTCAATTTGTGGGGCA
GGTGCAAGGTCTGATTCACGATGTGCCCACGGTGCAAGCATTGGTAACAC
GGGTCCTGGCCGAGGCAGCGGGAATTCATGCCAAACAGCACCAGGAATTG
TTTGGAAGGAGCGGGTGA back to topCoding sequence (CDS) from alignment at chr8:741851..743718+ >NO08G02640.1 ID=NO08G02640.1|Name=NO08G02640.1|organism=Nannochloropsis oceanica|type=CDS|length=1056bp|location=Sequence derived from alignment at chr8:741851..743718+ (Nannochloropsis oceanica) ATGCAGACGCGCGTCACCCGGCTCTTTAAGATCCAATACCCAATTGTCCT CCCAGGCATGTCGTGGATCTCAAAGCCTAAACTAGTGGCTGCCGTGTGCA ATGCGGGCGGGCTAGGCATCCTCGCCTCAGGGCCTCTCTCGGCCGTCGAA ACGGCTGTAGCCATCAAGGAGATCCGCAGCCTCACAGACAAGCCCTTTGG GATTGGCACCACCCTTATGATGCCGGGCGCCAAGGAAAACGCGACAGTCG CCTTGGAAGAAGAGGTACCCGTCATCAATTACAGCCTGGGCAAGGGAGAC TGGCTGGTGCAAAGAGCCCACGCGTACGGTGGCAAGGTCATCGCAACCGT CACTTCGGTGAAGCATGCCAAGTCGGCGAAAAGCAGCGGTGCGGATGCCC TCCTTGTAACGGGACACGAAGCCGCTGCACATGGGGGGGACGTGACCTCC TTGGTATTAATTCCATCCATCGCGGCCAATGTACCGGACCTGCCGTTGAT CGCTGCAGGGGGATTCGGAGATGGAAGAGGCTTGCTGGCGGCTTTGTCCT TGGGAGCGGATGCAGTGGCGATGGGCACCCGATTTGCTTGCACGGAGGAG AGTCCATTGCATGAAAACGTGAAGAAGGCCATTACAAGTGATGGTCAAAC GGAAAGTAGCACGGTTTATTCCAAAAATATCGATGGGATATGGGCAAGGG TGATGAAGACGCCTTTCGCTGCAGAGGCGGCAAGTAAGCGGGCGAACCCT CTCGTTGTGGCGATCGAGGCTTTAAAGCAGGCGAAACGGTTCGGTGTCAA CCCACTCAAGGTTTTGCCGGGCCTGTTTATGGAGCCAGATAAAATTTACA TGCTGGCGCAGTTTGGAGGGGCGACGCGTAAGTTTGAGCTGGCGACGATT GAAGGTGATTTGGAAAAGGGCATTCAATTTGTGGGGCAGGTGCAAGGTCT GATTCACGATGTGCCCACGGTGCAAGCATTGGTAACACGGGTCCTGGCCG AGGCAGCGGGAATTCATGCCAAACAGCACCAGGAATTGTTTGGAAGGAGC GGGTGA back to top
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