NO08G02430.1, NO08G02430.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO08G02430.1
Unique NameNO08G02430.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2123
Alignment locationchr8:705462..707822 +

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Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr8genomechr8:705462..707822 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO08G02430.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO08G02430NO08G02430Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO08G02430.1NO08G02430.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO08G02430.1.cds1NO08G02430.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO08G02430.1 ID=NO08G02430.1|Name=NO08G02430.1|organism=Nannochloropsis oceanica|type=mRNA|length=2123bp
AGCGCGGGATTCATGATTGCCTGTGAATGGGGTGAATGGGGTGCTTGAGG
TAGACTCTGACAAGCAAGGACGAAGAGGGAGGAGAGGAGGTGGAGTCAGT
CGGCAGCGACGAGACTGGTCAAGACAGGTGCCAGAGCCGCACAAGCCCCG
AGATGTTTCAAATCTGTACAATATGAGTGCCCTGACCATGAGGATGTGAT
GCTATGCACGGTACAGTGTCTGACTGCTGCGGCAAAAGTGTCTTATCAGA
TCTCTGAGCCAAACATGCCACGCCAACGCCAAATAATATGTGAACATGCA
TGTGACGCATCATGATAATAGACTACAGCTATAGCGCTACGCGCCCGTGC
TTCGCGAAAACTCTCAGAGGAAATTGATTGCTCGATTGACGAAAGGTGAG
ACGTCAAAGGCTAATTGTGACGCGGCCGGTGCTCACATACGGACTCGGTA
AGTGCTCACTTGGGGAACCTCGAAGCCCGGCGCTAAAGTTGCTTCGTCGC
GTTGCGTTAACTACTGTTTTACGCCCGCGCGTGCGCACAGGGGCCGTTAT
TCTTTTGACGCGTTCGCCTCGTGCCAAGCGGCATCGTCCGAACGTGTCCA
AAAAAGGATTGAGTGCACGAAAGGCCTCGGGGATGTTAGGGTACTGCCCT
TGCTTGCTTCCCTCATCTCAACGACACATGTCTCGGGCTCATTAGACACA
TACGTACCCCAGGCTCCCGGATGTGTGGGAAATAATAGGGGGCAATCTGT
ACTTTCTTTACTTACAACCTTTCCTCACACTTCTTCCTTCCTCATTCTCT
ACAAATACACAGTAATGCTACTTCTTATCCTCACCTGGCTGCAGAGGATG
CCGGCCTCCGACGCCTTCCTCCACCATTCGAAGATATCAGTCCTGACCTG
CTCCTCAGCAGCCTGATTTGGTATTTACGGTAACGAAGCTCCCCAAATTA
CTCATTTTGTGTCAGCTATGAATTCTTCTTCCTCCTCCACGTCGTCTTCC
ATCTCCTTCACCACATATTCCTCGTCGTTGCTGCCTTTGGATCCGACGGC
GCTAGCACTGTATCAGATACCTCCATGAATTTCAGCTTAGACCGCTGGGA
ATTCAAGGCAAGCAACGAGCTGAGCGACGAACTAGGCTGTTTTTTGAAGG
GTGGAGATTGATGAAGATTCTTCCACGCGACGGGGCATCGCAAGAACGAT
TAGGGCCTCATGGTCGACTGTTAAAGTTTTACGAAATGGATCCTTCTCTT
TGCAAGCGATTGCGTCTTCATTTTCCCCTTCTGAAGCGATCACGATGGCA
GCAAGCACCGTCAGCTCCATCACCACCCGCGAGGAGACAAGCCGAATGTC
ACCCGGTGGCTTTGGTAAGCAACCCTCGGAGAGCGACCGGGTCTTCGGCA
CCTTGACCTTCGAGGTGGACCAGACGGAGGAAATAAGTTCATTCTTGGGG
GGTTTAGGGATGCCGCAATCGTTCCTGAACCGCCCACAGACCGTGCGGGA
CCTAGGTGGGAAGCAGAGGGAGGTACTCGTCACAGTTGTGAGCATGGACA
CAATCATCCTCCTCTTTGTGGAGCGAAGCAAGTTTTATGTCCCTACACGT
TCCACACCATCATCTAATTCTTCGGATGCCCGAGTGCCTACTTCCCTGAA
CTCGTGCTCGTGACGCATATTTTTTCCATGGTTGCCACGGCGGTCGCGGA
CGCCCTCCGCTCCGATCTGATGCATTTTTTGGATAGATAGAAAGACATTA
AGAGATAAATCCTCCCTCCTGCTGCGACGATGCAAAAGTGAAGCAGTGTT
AAGTCGCGCAGTTTACTGCCTTGCCGTCCACTAACTACTGAGCAAGTGGG
AAAACTAATCACAGGCATCCACGTCAATCTCCCACTTCCTATTTTGTCTG
TAAATTTTGTTGATTAGCGAAAATCAGGATCGATCGAGTAAAAATGTGTC
TGTCATCAACCATTTAATGTCTGGGCCTCTGTCGGGAAGTGGCTGTCTCC
CCGCCTTTACTTGATACGATTAGTCAGTCCCTCTGTCTGTCAGTCCATCA
CTTTATGGATGGGCGGATCGGGTGCCTGTGTGAAGGAGGCACACGCAGAA
CCCCTAAAACAAATTAGTCCGGA
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protein sequence of NO08G02430.1

>NO08G02430.1-protein ID=NO08G02430.1-protein|Name=NO08G02430.1|organism=Nannochloropsis oceanica|type=polypeptide|length=123bp
MAASTVSSITTREETSRMSPGGFGKQPSESDRVFGTLTFEVDQTEEISSF
LGGLGMPQSFLNRPQTVRDLGGKQREVLVTVVSMDTIILLFVERSKFYVP
TRSTPSSNSSDARVPTSLNSCS*
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mRNA from alignment at chr8:705462..707822+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO08G02430.1 ID=NO08G02430.1|Name=NO08G02430.1|organism=Nannochloropsis oceanica|type=mRNA|length=2361bp|location=Sequence derived from alignment at chr8:705462..707822+ (Nannochloropsis oceanica)
AGCGCGGGATTCATGATTGCCTGTGAATGGGGTGAATGGGGTGCTTGAGG
TAGACTCTGACAAGCAAGGACGAAGAGGGAGGAGAGGAGGTGGAGTCAGT
CGGCAGCGACGAGACTGGTCAAGACAGGTGCCAGAGCCGCACAAGCCCCG
AGATGTTTCAAATCTGTACAATATGAGTGCCCTGACCATGAGGATGTGAT
GCTATGCACGGTACAGTGTCTGACTGCTGCGGCAAAAGTGTCTTATCAGA
TCTCTGAGCCAAACATGCCACGCCAACGCCAAATAATATGTGAACATGCA
TGTGACGCATCATGATAATAGACTACAGCTATAGCGCTACGCGCCCGTGC
TTCGCGAAAACTCTCAGAGGAAATTGATTGCTCGATTGACGAAAGGTGAG
ACGTCAAAGGCTAATTGTGACGCGGCCGGTGCTCACATACGGACTCGGTA
AGTGCTCACTTGGGGAACCTCGAAGCCCGGCGCTAAAGTTGCTTCGTCGC
GTTGCGTTAACTACTGTTTTACGCCCGCGCGTGCGCACAGGGGCCGTTAT
TCTTTTGACGCGTTCGCCTCGTGCCAAGCGGCATCGTCCGAACGTGTCCA
AAAAAGGATTGAGTGCACGAAAGGCCTCGGGGATGTTAGGGTACTGCCCT
TGCTTGCTTCCCTCATCTCAACGACACATGTCTCGGGCTCATTAGACACA
TACGTACCCCAGGCTCCCGGATGTGTGGGAAATAATAGGGGGCAATCTGT
ACTTTCTTTACTTACAACCTTTCCTCACACTTCTTCCTTCCTCATTCTCT
ACAAATACACAGTAATGCTACTTCTTATCCTCACCTGGCTGCAGAGGATG
CCGGCCTCCGACGCCTTCCTCCACCATTCGAAGATATCAGTCCTGACCTG
CTCCTCAGCAGCCTGATTTGGTATTTACGGTAACGAAGCTCCCCAAATTA
CTCATTTTGTGTCAGCTATGAATTCTTCTTCCTCCTCCACGTCGTCTTCC
ATCTCCTTCACCACATATTCCTCGTCGTTGCTGCCTTTGGATCCGACGGC
GCTAGCACTGTATCAGGTATGTCCCACGTATTCGAGGACGGGTCGAGATC
ATCTCGACCCGTCCTCGATGATGCGTGATTGTTGTAAGAACCCACTTGAG
ATGTCTCCGTCCTCATTCACGGCATGTGATGGGAGTGAATATTTTTCCAC
TTGCATCCATGCATCTGGCCTCCCTCCCTCCGCCACGCCCTCTCTTTCTT
TTGGCAGTGTTCACCAGACTCTTGATATTTCATCTGCTTCTCCTCATTTG
ATAGATACCTCCATGAATTTCAGCTTAGACCGCTGGGAATTCAAGGCAAG
CAACGAGCTGAGCGACGAACTAGGCTGTTTTTTGAAGGGTGGAGATTGAT
GAAGATTCTTCCACGCGACGGGGCATCGCAAGAACGATTAGGGCCTCATG
GTCGACTGTTAAAGTTTTACGAAATGGATCCTTCTCTTTGCAAGCGATTG
CGTCTTCATTTTCCCCTTCTGAAGCGATCACGATGGCAGCAAGCACCGTC
AGCTCCATCACCACCCGCGAGGAGACAAGCCGAATGTCACCCGGTGGCTT
TGGTAAGCAACCCTCGGAGAGCGACCGGGTCTTCGGCACCTTGACCTTCG
AGGTGGACCAGACGGAGGAAATAAGTTCATTCTTGGGGGGTTTAGGGATG
CCGCAATCGTTCCTGAACCGCCCACAGACCGTGCGGGACCTAGGTGGGAA
GCAGAGGGAGGTACTCGTCACAGTTGTGAGCATGGACACAATCATCCTCC
TCTTTGTGGAGCGAAGCAAGTTTTATGTCCCTACACGTTCCACACCATCA
TCTAATTCTTCGGATGCCCGAGTGCCTACTTCCCTGAACTCGTGCTCGTG
ACGCATATTTTTTCCATGGTTGCCACGGCGGTCGCGGACGCCCTCCGCTC
CGATCTGATGCATTTTTTGGATAGATAGAAAGACATTAAGAGATAAATCC
TCCCTCCTGCTGCGACGATGCAAAAGTGAAGCAGTGTTAAGTCGCGCAGT
TTACTGCCTTGCCGTCCACTAACTACTGAGCAAGTGGGAAAACTAATCAC
AGGCATCCACGTCAATCTCCCACTTCCTATTTTGTCTGTAAATTTTGTTG
ATTAGCGAAAATCAGGATCGATCGAGTAAAAATGTGTCTGTCATCAACCA
TTTAATGTCTGGGCCTCTGTCGGGAAGTGGCTGTCTCCCCGCCTTTACTT
GATACGATTAGTCAGTCCCTCTGTCTGTCAGTCCATCACTTTATGGATGG
GCGGATCGGGTGCCTGTGTGAAGGAGGCACACGCAGAACCCCTAAAACAA
ATTAGTCCGGA
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Coding sequence (CDS) from alignment at chr8:705462..707822+

>NO08G02430.1 ID=NO08G02430.1|Name=NO08G02430.1|organism=Nannochloropsis oceanica|type=CDS|length=369bp|location=Sequence derived from alignment at chr8:705462..707822+ (Nannochloropsis oceanica)
ATGGCAGCAAGCACCGTCAGCTCCATCACCACCCGCGAGGAGACAAGCCG
AATGTCACCCGGTGGCTTTGGTAAGCAACCCTCGGAGAGCGACCGGGTCT
TCGGCACCTTGACCTTCGAGGTGGACCAGACGGAGGAAATAAGTTCATTC
TTGGGGGGTTTAGGGATGCCGCAATCGTTCCTGAACCGCCCACAGACCGT
GCGGGACCTAGGTGGGAAGCAGAGGGAGGTACTCGTCACAGTTGTGAGCA
TGGACACAATCATCCTCCTCTTTGTGGAGCGAAGCAAGTTTTATGTCCCT
ACACGTTCCACACCATCATCTAATTCTTCGGATGCCCGAGTGCCTACTTC
CCTGAACTCGTGCTCGTGA
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Synonyms
Publications