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Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
chr8 | genome | chr8:691602..694940 - |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
BLAST of NO08G02370.1 vs.
Match: EWM26722.1 (hypothetical protein Naga_100001g144 [Nannochloropsis gaditana]) HSP 1 Score: 436.4 bits (1121), Expect = 8.700e-119 Identity = 225/371 (60.65%), Postives = 282/371 (76.01%), Query Frame = 0
Query: 1 MYRRAALAAPAKVTAVASSPSSGEALTAGTSWKEWRTSAVLYVANALPASERRAILDRWGDITHKVTHE---ADAQLSTMRSDLYNAKAAEANALAEVGRLKQLISFHAKIKPEETMQATHPVLGQLVADMGYKKIYCASIKQLGDVVIWEQQRILRKERAHAIAREKARRSFPVKFPGIITLYQLPDGQYKLLDGQHRLAALKILADTGIINKDTNFCLVEVFALEKESEARALFLEINSAMPVKLIDMPDGIGSRPDIKCIIDGAMNRMLSRYPAFFKSSLNPKLPHINIDNLRDDLYQHHVVERQGLKTARELEEWLQQVNEILSQKHDKDWKLTLKGRNPLVVEKALDKARKGSFFLGMDHTWLGWD 369
M R A PA V +S+ ++ K+ +L +A LP S+R+ I+ +W + + + QL MR ++ AKA+ +AL EV RL++ I+F KIKPE++ +HPVLGQL+ADMGYKK+YCA+I QL DV IWE+QRILR+ERA +IAREK R+SFPVK PGIITLYQL D QYKLLDGQHRLAALKILAD+GII+KD NFCL+EVF LEKESEARALFLEINSAMPVKLID+PDG G+RPDIK IIDGA++ ++S++PAFFKSSLNPKLPH+NIDN+RD L+QHH+VER G K+A EL +WLQ NE LS KHD+DWK KGRNPLV+EKA+ KA+KG F+LG+D+ WL ++
Sbjct: 1 MRRHATSVVPAAVNNFSSASLPKAKISLSRLCKD----LILRMATMLPVSDRKEIMAQWMAQESSIYTDIATVENQLLRMRLEVETAKASHVSALQEVERLRERITFQTKIKPEDS---SHPVLGQLIADMGYKKVYCATINQLADVPIWEKQRILRRERAESIAREKMRQSFPVKLPGIITLYQLADKQYKLLDGQHRLAALKILADSGIISKDNNFCLLEVFTLEKESEARALFLEINSAMPVKLIDLPDG-GARPDIKGIIDGAVDNLVSQFPAFFKSSLNPKLPHVNIDNMRDALFQHHIVERHGHKSAVELLKWLQDANENLSTKHDRDWKRIFKGRNPLVIEKAVAKAKKGGFYLGLDNRWLAFE 363
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO08G02370.1 ID=NO08G02370.1|Name=NO08G02370.1|organism=Nannochloropsis oceanica|type=mRNA|length=2583bp AAAGCCTCCGTGGGTATGCCTTGCGCTGCTTCCTGTTGATAGCATTGCGG CACTAACGCACGCAAGTACCAGCAAGGAAGGAGACCATCCTTTTCTCTTT TCATGACACGCCTCAAGACGCGATACCAAGCAACAGTTGCTCCGTACGCA TGCATGCTTGAGACAGAGGATACGTAACCGTTTGCCATTTGCCGAAGCAG ATAAAACACTAGCCACACATCATAAGGTTGTTGGTCGCTGATGAGCAGTT ATAAAATCGATCTGTTCCGATCCCTCCCGGTCATACGATTACACTTTGTG TACAATATGTAGATATATGTTTACATGTTTATACATTTTTTCAACCTTCA GTATTTTTTCTCTTACTCTGCCGTTACATCCCACATTGCTTGATGATGTT AATCTCAAGAGGCGCCACTTCTGTGTTCAAGATGAATTTATCGAATTAGA ACAAGAGAGGTGCTCGCTCATTTCGATGCTCTGATCTTCTTTCTTTCTGA CTGCTTGCTTGCACTATAGTTTACTTCCTGGTCAAATATCAACCAAACAA CCTCATGTACCAAGCCAAGGGCACCTGGAAAACCTCGACGACATCCTCGG CCACGATAGCCATGCATGTTAAGCCCGGGCCTTGGCGATGTGTCATGAAG CCCACCAAGCCAGGTCGATTTTGACTGACCACCAACCTCATGCACACGAT TTGTAGCGAAGTTGGTGACTGTCCTGTGTCGACGCCACATCACTGTATTT GGAGCTGCGTGAACCCCGCCGCCCGTCCCAAGGGCACCTACGGATCTCGG GGGAAAAGCAGGGTGGAATCGTTCCCCCAGTACCCTGTTGCTAAGAGGGT GTACGCGTAAACAGGTCTCGGGGTTATACCAACACATATCAGGCACAGTC GTAGGCAAAGGCCTCGGGGAGGGCGGCAATATCATGTACCGCCGTGCTGC TTTGGCTGCACCGGCAAAGGTGACAGCGGTCGCCTCATCTCCATCAAGTG GTGAAGCCTTGACCGCTGGGACAAGCTGGAAGGAGTGGCGCACCAGCGCA GTCCTGTATGTGGCTAATGCCTTGCCTGCTAGCGAACGCCGTGCTATTTT GGATCGATGGGGAGACATTACGCATAAGGTAACTCACGAAGCCGATGCAC AACTTTCCACAATGCGATCGGATTTATACAATGCAAAGGCAGCCGAGGCT AACGCGCTAGCAGAAGTGGGGCGACTCAAGCAATTGATTTCGTTTCATGC CAAGATCAAGCCCGAGGAGACCATGCAGGCCACGCATCCTGTCTTGGGCC AGCTCGTGGCCGACATGGGCTACAAGAAGATCTACTGTGCCTCCATCAAG CAACTCGGGGATGTTGTGATCTGGGAGCAACAGCGTATTCTGCGGAAGGA GAGAGCCCATGCAATAGCACGAGAGAAAGCCCGACGGTCGTTTCCAGTCA AATTTCCCGGCATTATCACCCTCTACCAGCTGCCAGACGGGCAGTACAAG CTTCTGGATGGACAACACAGGTTGGCGGCTTTAAAAATACTGGCTGACAC AGGAATCATTAACAAAGACACGAATTTCTGCCTCGTGGAGGTGTTTGCCC TTGAAAAAGAGTCGGAAGCCCGCGCCTTGTTCCTTGAAATTAACAGCGCC ATGCCTGTGAAGCTCATCGACATGCCGGACGGAATAGGGTCGCGACCGGA CATCAAATGTATCATCGACGGGGCCATGAATAGAATGCTGTCCAGATACC CGGCCTTTTTCAAGAGCAGCCTCAATCCGAAATTGCCGCACATCAACATC GACAACCTCCGGGACGATCTTTATCAGCACCACGTCGTAGAGAGGCAAGG GCTGAAAACGGCCAGAGAGTTAGAAGAGTGGTTGCAGCAAGTGAACGAGA TTCTTTCGCAAAAGCACGACAAGGATTGGAAGCTTACTCTCAAGGGTCGC AATCCATTGGTGGTGGAAAAGGCACTCGACAAGGCGCGCAAAGGCAGTTT TTTCCTAGGTATGGACCACACCTGGTTAGGTTGGGATGCATGTTGATGAG GATAAGAAATTGCGGAAGTGGGAGATTTCTTGATGAATACCGCCCACTTA CCCTAGCATGCTCGTTATTCTGGAGTCAAACCTTTTTAAAAAATGTGAGC CCTTTTTTCGAGATGAGGCCTGAAGTTATCAGTCGCAGCGAAGGCTTAGG ATTGCTGACGCGATCCCCAGTTTAGCTTGAGGTTTTGGATGGGATAACGG TAGGATTTGTGGGAATTCCCTGATTGCCCTGATTGCCAATGCCTTTCAGC TGTGACACATTCACATGGCATGTGAAGGCTGATGTCCTCTGTTGTCTTGA AAGGGGAAATTTGTGCTTGTTAACAGAAGGGAGATAGGGCCCCTGAACAA GGAAGATAAATAAGCTTCCGGAGATTTGGAGGTTCTCCTTTTTGAATCCA AGCTCTTCTAGCAATAATGAGAGGCAAAGGCTGAATGTATTGAGGTGTAT GGATGGGCAAGGGGAAGGTCAGACGTTTCATTTCCGAAATTGCTGTGTTT GAAAGTAAAATGCAAATATGGAAGGACAAAGGA back to topprotein sequence of NO08G02370.1 >NO08G02370.1-protein ID=NO08G02370.1-protein|Name=NO08G02370.1|organism=Nannochloropsis oceanica|type=polypeptide|length=371bp MYRRAALAAPAKVTAVASSPSSGEALTAGTSWKEWRTSAVLYVANALPAS ERRAILDRWGDITHKVTHEADAQLSTMRSDLYNAKAAEANALAEVGRLKQ LISFHAKIKPEETMQATHPVLGQLVADMGYKKIYCASIKQLGDVVIWEQQ RILRKERAHAIAREKARRSFPVKFPGIITLYQLPDGQYKLLDGQHRLAAL KILADTGIINKDTNFCLVEVFALEKESEARALFLEINSAMPVKLIDMPDG IGSRPDIKCIIDGAMNRMLSRYPAFFKSSLNPKLPHINIDNLRDDLYQHH VVERQGLKTARELEEWLQQVNEILSQKHDKDWKLTLKGRNPLVVEKALDK ARKGSFFLGMDHTWLGWDAC* back to topmRNA from alignment at chr8:691602..694940- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO08G02370.1 ID=NO08G02370.1|Name=NO08G02370.1|organism=Nannochloropsis oceanica|type=mRNA|length=3339bp|location=Sequence derived from alignment at chr8:691602..694940- (Nannochloropsis oceanica) AAAGCCTCCGTGGGTATGCCTTGCGCTGCTTCCTGTTGATAGCATTGCGG
CACTAACGCACGCAAGTACCAGCAAGGAAGGAGACCATCCTTTTCTCTTT
TCATGACACGCCTCAAGACGCGATACCAAGCAACAGTTGCTCCGTACGCA
TGCATGCTTGAGACAGAGGATACGTAACCGTTTGCCATTTGCCGAAGCAG
ATAAAACACTAGCCACACATCATAAGGTTGTTGGTCGCTGATGAGCAGTT
ATAAAATCGATCTGTTCCGATCCCTCCCGGTCATACGATTACACTTTGTG
TACAATATGTAGATATATGTTTACATGTTTATACATTTTTTCAACCTTCA
GTATTTTTTCTCTTACTCTGCCGTTACATCCCACATTGCTTGATGATGTT
AATCTCAAGAGGCGCCACTTCTGTGTTCAAGATGAATTTATCGAATTAGA
ACAAGAGAGGTGCTCGCTCATTTCGATGCTCTGATCTTCTTTCTTTCTGA
CTGCTTGCTTGCACTATAGTTTACTTCCTGGTCAAATATCAACCAAACAA
CCTCATGTACCAAGCCAAGGGCACCTGGAAAACCTCGACGACATCCTCGG
CCACGATAGCCATGCATGTTAAGCCCGGGCCTTGGCGATGTGTCATGAAG
CCCACCAAGCCAGGTCGATTTTGACTGACCACCAACCTCATGCACACGAT
TTGTAGCGAAGTTGGTGACTGTCCTGTGTCGACGCCACATCACTGTATTT
GGAGCTGCGTGAACCCCGCCGCCCGTCCCAAGGGCACCTACGGATCTCGG
GGGAAAAGCAGGGTGGAATCGTTCCCCCAGTACCCTGTTGCTAAGAGGGT
GTACGCGTAAACAGGTCTCGGGGTTATACCAACACATATCAGGCACAGTC
GTAGGCAAAGGCCTCGGGGAGGGCGGCAATATCATGTACCGCCGTGCTGC
TTTGGCTGCACCGGCAAAGGTGACAGCGGTCGCCTCATCTCCATCAAGTG
GTGAAGCCTTGACCGCTGGGACAAGCTGGAAGGAGTGGCGCACCAGCGCA
GTCCTGTATGTGGCTAATGCCTTGCCTGCTAGCGAACGCCGTGCTATTTT
GGATCGATGGGGAGACATTACGCATAAGGTAACTCACGAAGCCGATGCAC
AACTTTCCACAATGCGATCGGATTTATACAATGCAAAGGCAGCCGAGGCT
AACGCGCTAGCAGAAGTGGGGCGACTCAAGTAAGTACTATGTATGACAAT
GCGGCACGGCACATTTACTTGCAATTTATCGTGTGGACCGTGCGGGTCAT
GCTTTTTGGCGTGGCCCTCATTATATTTCTCGAGACGGTCGAAAATCTGT
GGGTGCATCGGGGTGCATGTTGGGGCGTCGGTGCGAGAAGTGTACCATTT
GTTGTCTAGAAGACTCCTGTTTCAGATTGGTTAGCGACTCATTAAATTCC
ATCAAACCTCCTTCCTTTTTTACCATTTTCTCCTCAGGCATGTGCATGTA
CGCGCCGTCCCGTTCCCCTGCAACTCCCTGCTTCATCAAATAATATTTAT
TCTTTCCCCCCTTTTTTAAACCACAGAAAGCCTTTTAGTTGCAGCAACAA
ACGGATAAGGATATATGTTGCTCCGTCCTTATGCTCTCCCTCCTTCCCAC
CACACTCTCTCGAAATTTATCGATTTCACGACCTAAACACAGGCAATTGA
TTTCGTTTCATGCCAAGATCAAGCCCGAGGAGACCATGCAGGCCACGCAT
CCTGTCTTGGGCCAGCTCGTGGCCGACATGGGCTACAAGAAGATCTACTG
TGCCTCCATCAAGCAACTCGGGGATGTTGTGATCTGGGAGCAACAGCGTA
TTCTGCGGAAGGAGAGAGCCCATGCAATAGCACGAGAGAAAGCCCGACGG
TCGTTTCCAGTCAAATTTCCCGGCATTATCACCCTCTACCAGCTGCCAGA
CGGGCAGTACAAGCTTCTGGATGGACAACACAGGTTGGCGGCTTTAAAAA
TACTGGCTGACACAGGAATCATTAACAAAGACACGAATTTCTGCCTCGTG
GAGGTGTTTGCCCTTGAAAAAGAGTCGGAAGCCCGCGCCTTGTTCCTTGA
AATTAACAGCGCCATGCCTGTGAAGCTCATCGACATGCCGGACGGAATAG
GGTCGCGACCGGACATCAAATGTATCATCGACGGGGCCATGAATAGAATG
CTGTCCAGATACCCGGCCTTTTTCAAGAGCAGCCTCAATCCGAAATTGCC
GCACATCAACATCGACAACCTCCGGGACGATCTTTATCAGGTAAAGAATA
AGAGGCAGAGGAGAGGGGAGGGGGAGAGAAGAGAGGCATGTATCTCAAAT
CGGCAATCATAAACCGACCTGACTTGTTTTCAAGAATTAAATCGTAGGGA
GGGATTTTAATGACACGTGCCGATAAGGGAAGTACAGAGAGTTATCCCCA
TATGAGCACGGTTTACAGGTTTCGTTTTCTTCAACCACGTTGGGTGTCAA
AGTGATCGATCTATTGCGATCGATAGTAACTGAAGCCTCTTTACGGACCA
ATTCAGCCATCAACTGACAAATCATCAACACAGCACCACGTCGTAGAGAG
GCAAGGGCTGAAAACGGCCAGAGAGTTAGAAGAGTGGTTGCAGCAAGTGA
ACGAGATTCTTTCGCAAAAGCACGACAAGGATTGGAAGCTTACTCTCAAG
GGTCGCAATCCATTGGTGGTGGAAAAGGCACTCGACAAGGCGCGCAAAGG
CAGTTTTTTCCTAGGTATGGACCACACCTGGTTAGGTTGGGATGCATGTT
GATGAGGATAAGAAATTGCGGAAGTGGGAGATTTCTTGATGAATACCGCC
CACTTACCCTAGCATGCTCGTTATTCTGGAGTCAAACCTTTTTAAAAAAT
GTGAGCCCTTTTTTCGAGATGAGGCCTGAAGTTATCAGTCGCAGCGAAGG
CTTAGGATTGCTGACGCGATCCCCAGTTTAGCTTGAGGTTTTGGATGGGA
TAACGGTAGGATTTGTGGGAATTCCCTGATTGCCCTGATTGCCAATGCCT
TTCAGCTGTGACACATTCACATGGCATGTGAAGGCTGATGTCCTCTGTTG
TCTTGAAAGGGGAAATTTGTGCTTGTTAACAGAAGGGAGATAGGGCCCCT
GAACAAGGAAGATAAATAAGCTTCCGGAGATTTGGAGGTTCTCCTTTTTG
AATCCAAGCTCTTCTAGCAATAATGAGAGGCAAAGGCTGAATGTATTGAG
GTGTATGGATGGGCAAGGGGAAGGTCAGACGTTTCATTTCCGAAATTGCT
GTGTTTGAAAGTAAAATGCAAATATGGAAGGACAAAGGA back to topCoding sequence (CDS) from alignment at chr8:691602..694940- >NO08G02370.1 ID=NO08G02370.1|Name=NO08G02370.1|organism=Nannochloropsis oceanica|type=CDS|length=1113bp|location=Sequence derived from alignment at chr8:691602..694940- (Nannochloropsis oceanica) ATGTACCGCCGTGCTGCTTTGGCTGCACCGGCAAAGGTGACAGCGGTCGC CTCATCTCCATCAAGTGGTGAAGCCTTGACCGCTGGGACAAGCTGGAAGG AGTGGCGCACCAGCGCAGTCCTGTATGTGGCTAATGCCTTGCCTGCTAGC GAACGCCGTGCTATTTTGGATCGATGGGGAGACATTACGCATAAGGTAAC TCACGAAGCCGATGCACAACTTTCCACAATGCGATCGGATTTATACAATG CAAAGGCAGCCGAGGCTAACGCGCTAGCAGAAGTGGGGCGACTCAAGCAA TTGATTTCGTTTCATGCCAAGATCAAGCCCGAGGAGACCATGCAGGCCAC GCATCCTGTCTTGGGCCAGCTCGTGGCCGACATGGGCTACAAGAAGATCT ACTGTGCCTCCATCAAGCAACTCGGGGATGTTGTGATCTGGGAGCAACAG CGTATTCTGCGGAAGGAGAGAGCCCATGCAATAGCACGAGAGAAAGCCCG ACGGTCGTTTCCAGTCAAATTTCCCGGCATTATCACCCTCTACCAGCTGC CAGACGGGCAGTACAAGCTTCTGGATGGACAACACAGGTTGGCGGCTTTA AAAATACTGGCTGACACAGGAATCATTAACAAAGACACGAATTTCTGCCT CGTGGAGGTGTTTGCCCTTGAAAAAGAGTCGGAAGCCCGCGCCTTGTTCC TTGAAATTAACAGCGCCATGCCTGTGAAGCTCATCGACATGCCGGACGGA ATAGGGTCGCGACCGGACATCAAATGTATCATCGACGGGGCCATGAATAG AATGCTGTCCAGATACCCGGCCTTTTTCAAGAGCAGCCTCAATCCGAAAT TGCCGCACATCAACATCGACAACCTCCGGGACGATCTTTATCAGCACCAC GTCGTAGAGAGGCAAGGGCTGAAAACGGCCAGAGAGTTAGAAGAGTGGTT GCAGCAAGTGAACGAGATTCTTTCGCAAAAGCACGACAAGGATTGGAAGC TTACTCTCAAGGGTCGCAATCCATTGGTGGTGGAAAAGGCACTCGACAAG GCGCGCAAAGGCAGTTTTTTCCTAGGTATGGACCACACCTGGTTAGGTTG GGATGCATGTTGA back to top
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