NO08G01830.1, NO08G01830.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO08G01830.1
Unique Name	NO08G01830.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	3618
Alignment location	chr8:558780..562941 +

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr8	genome	chr8:558780..562941 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO08G01830.1 vs.
Match: XP_005854450.1 (violaxanthin de-epoxidase-related protein [Nannochloropsis gaditana CCMP526]; EKU21916.1 violaxanthin de-epoxidase-related protein [Nannochloropsis gaditana CCMP526]; EWM26585.1 violaxanthin de-epoxidase-related protein [Nannochloropsis gaditana])

HSP 1 Score: 879.4 bits (2271), Expect = 7.200e-252
Identity = 460/689 (66.76%), Postives = 535/689 (77.65%), Query Frame = 0

Query:   11 RARASTTPTS-----RNHRRRTTTT------ISTTTLKFLLLAICLGACMCSAFFYSPPILKRKAAPPPASSSTSSSSSAAAAAADYEKAHALVAAARPKTPIFWVAPLLMRLWKNKPSTSKRSGAKGSDCGGDFGGCRCGEGGGVHGSWMSSATVLAASASSSADNMSPSGFSSTK------TIAGPSKPVHVVTVVPGNGARGTLEAPWTEVMEHMHRRMQYVSPAFSLHVVTEEDLLTRGLAALADLPV--------------PASTEHARKTSSLNHPDILYFCKTQNPAIAPLLQHYIAQVPHVLALDSCPILTRKTRIGPARPYGPLAGFWKALPLPTERKRLLTLFETVQGFWERGHSDDILYCVLVVINAVLVDIPAVSEILKPVTFQALQCMLTNCGKQIVDCQRNPACKAALACLESCPPNDQVCRYRCIVQYESTEFEQFALCILQKHNCLRNQAAIPMSPDPAPITHFRGEKLTHEMAEEIQFGHLGGLQQKLPWSWKVISGVNPAYDFFPSQHMTYYQKGKALWYQPVFRVITFDGKQVWRRRLYRVRRAKVPGTFYYTVLDNGVTSSEFWRIIDAAEDMSWVLFYYSGAAAAAGQSYTGAILASPTGEWPAGPEESYKPRILAALDRAGIKEWELFKVNHGSSEGAPLEIDPLAERRFMYPGWAGAKKAEASAGG 669
            R +A   P+S        R+R  T+      +S + +  L L +C+ AC  +AFFY+P   +R      +SSS   SS A++A A YEKAHA VAAARP+TPIFW+APL+ R+WKN  + SKR+ +K   CGG  GGC C   GGV  S     TVL+ + S+ A   +P G ++ +        A  S+PVHVV VVPG+GARG LEAPWTEVM+HMHRRMQYV PAF+LHVVTEE++L RG AALA LP+              P+S+      S+   PD +YF   +NP +A  L+ Y+AQVPH++ALDSCP L +K+RIGPARPYGPLAGFWKA P+PTERKRLL LFETV+GFW+RGHSDD+LY VLVVINAVLVDIPAVSEILKPVT QAL+CML NCG QI+DCQRNPACKAAL+CLE C PNDQVCRYRCIVQYES EFEQFALCILQKHNCL+N AAIPMSPDPAP++HFRGE L+HE AEEIQFGHLG LQQ  PWSWKVI+GVNPAYDFFPSQHMTYY+KG+ALWYQPVFRVITFDG++VWRRRLYRVRR KVPGTFYY+VLDNGVTSSEFWRI+DAA+D+SWVLFYYSGAAAAAGQSYTGAILASPTGEWP+   E  K RILAALDRAGIKEWELF V+H  S+GAPLEIDP+AE RFMYPGWAGA+ ++A   G
Sbjct:    2 RGKAPNQPSSLQREASTRRKRKPTSFSLAPQLSRSGITVLTLLLCVWAC--TAFFYAPLPFRRSPIAASSSSSPPPSSEASSALARYEKAHAFVAAARPRTPIFWMAPLIARVWKNY-ANSKRAASKDCSCGG-LGGCGC--AGGV--SKRGDRTVLSMATSAPA-KRTPRGQTTGRGRRVPPRPAAGSRPVHVVAVVPGHGARGKLEAPWTEVMQHMHRRMQYVDPAFALHVVTEEEILDRGAAALAHLPLGPSSGLPPAPFPSSPSSSPSTAAASASGVPDAMYFLDVKNPKVAHELKGYMAQVPHLIALDSCPELAQKSRIGPARPYGPLAGFWKAFPVPTERKRLLELFETVRGFWKRGHSDDVLYSVLVVINAVLVDIPAVSEILKPVTLQALRCMLGNCGAQIIDCQRNPACKAALSCLEQCAPNDQVCRYRCIVQYESREFEQFALCILQKHNCLQNHAAIPMSPDPAPLSHFRGEPLSHEAAEEIQFGHLGQLQQGCPWSWKVIAGVNPAYDFFPSQHMTYYRKGQALWYQPVFRVITFDGREVWRRRLYRVRRGKVPGTFYYSVLDNGVTSSEFWRILDAADDLSWVLFYYSGAAAAAGQSYTGAILASPTGEWPSA--EPCKARILAALDRAGIKEWELFNVHHDGSDGAPLEIDPMAEARFMYPGWAGARTSQADDEG 679

The following BLAST results are available for this feature:

BLAST of NO08G01830.1 vs.

BLAST of NO08G01830.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
XP_005854450.1	7.200e-252	66.76	violaxanthin de-epoxidase-related protein [Nannoch...	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO08G01830	NO08G01830	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO08G01830.1	NO08G01830.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO08G01830.1.cds1	NO08G01830.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO08G01830.1.cds2	NO08G01830.1.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO08G01830.1.cds3	NO08G01830.1.cds3	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr8:558780..562941+
coding sequence from alignment at chr8:558780..562941+

mRNA sequence

>NO08G01830.1 ID=NO08G01830.1|Name=NO08G01830.1|organism=Nannochloropsis oceanica|type=mRNA|length=3618bp
AAGAGAGAACTGCCTTAGCTGTCTTTATGTATTGTATAGTTGTGGACGTG
TTTGGGAAGACGGGGCGTGAAAATGTGCATGTAGGACGTGTGGAACTCGC
CACGCTGCTAGAGCAGGAACAACACGAAGAAAGGGCCTGTTCCCCCACGC
GTCCCCTAGAAATCATAAACGGGTCCCAAATGTCTGAAAATTCACACATT
GTTCCTTCGGCAGAAACTGTGCTTCAGCAGGCTCCCTGAGGACACATGAG
TTGCCGGGACAAGCGGGTCAAAATGCTGGGCTCGTCGGGAAGTGTCCCAA
ATGTAGGATGCTGCAGACATAGCCGTGGAGCAGGAGGCTGTCAGGCAGCA
CAAATATCCTTCCCGCTATGCAGAATACATACATTCGTGCGCCTCCGAAA
CCTTTTACTGAAGATTATGATGGTATGAGAGCGTGTAAAACTTGAGGCAA
GCCGCACAGAGCCTCACAACATTTCTTTTGCCTTGTCAACGCATTTGGCT
GGGATATGGGCTTGAAAATCGGCCCAGAAAGAGTCCACTCTTGCTTCGTT
CGCACGTCGCACTTTTTACTATAGTAGTAAAAGACGGTATTTTGAATCGA
CGTTACGATGCGGAGGCTCGTGACAGAAGGAGTATGACCCAAGAGGCGCA
ACCTGCCAGCCCATTTCCCACCTTCGTTATATCCCATTGTCCGCGTCACT
TGACATGACATGCACTCCCATGAATTGTGCCTTTGTTCTTCCCCACCCTG
GAACGGGCATCACAAGTGTCAACACATTCCCGCATCCTCGACAGGCCTTT
GCAAGGCATCATCATGACTCGACACCGGCAACACGACCTACGGCGAGCTC
GAGCAAGCACAACACCAACTTCGAGGAACCATAGGCGAAGAACGACGACG
ACAATATCGACCACCACTCTGAAGTTCCTACTATTGGCTATCTGCCTGGG
TGCCTGCATGTGTTCGGCTTTCTTCTATTCGCCTCCCATCTTAAAACGCA
AGGCAGCTCCACCCCCTGCCTCCTCCTCGACGTCCTCCTCCTCTTCTGCC
GCCGCTGCAGCTGCAGATTACGAAAAAGCGCATGCATTGGTCGCTGCAGC
CCGACCCAAAACTCCTATTTTTTGGGTGGCGCCATTGCTCATGCGCTTGT
GGAAAAACAAGCCGAGCACCAGCAAGCGTAGCGGCGCCAAGGGCAGCGAT
TGTGGGGGTGATTTTGGCGGGTGTCGGTGTGGGGAAGGAGGAGGGGTGCA
TGGCAGTTGGATGAGCAGCGCCACGGTCTTGGCGGCGAGTGCCTCGTCTT
CGGCAGACAACATGTCACCAAGTGGATTTTCTTCGACGAAAACAATTGCT
GGCCCTTCCAAGCCCGTGCACGTGGTAACGGTCGTCCCAGGGAATGGGGC
AAGGGGGACGCTGGAAGCACCATGGACGGAAGTCATGGAGCATATGCATC
GCCGGATGCAGTACGTGAGTCCTGCCTTCTCCCTGCATGTTGTGACAGAG
GAAGACTTACTGACTCGTGGATTGGCAGCCTTGGCCGACCTCCCCGTCCC
TGCCTCCACCGAGCACGCACGCAAAACTTCCTCCCTCAACCACCCAGACA
TCCTCTACTTCTGCAAAACCCAAAATCCCGCCATTGCTCCTTTGCTACAG
CACTACATCGCCCAGGTTCCTCACGTTCTCGCCCTTGACTCCTGCCCTAT
TTTGACCCGAAAGACGCGGATTGGTCCTGCACGTCCCTACGGACCTTTGG
CGGGGTTTTGGAAGGCCCTCCCTTTGCCAACAGAGAGGAAGAGGCTGTTG
ACTTTGTTTGAAACTGTCCAGGGATTTTGGGAACGGGGGCATAGCGATGA
TATACTTTATTGTGTGTTGGTGGTAATCAATGCCGTGCTGGTCGATATCC
CGGCGGTGTCGGAGATACTGAAGCCTGTGACTTTTCAGGCCTTGCAATGC
ATGTTGACGAATTGCGGGAAGCAGATTGTGGATTGTCAGAGGAATCCAGC
GTGTAAAGCGGCCTTAGCCTGCCTAGAGAGCTGTCCACCCAACGATCAAG
TCTGTCGGTACCGCTGCATCGTCCAATACGAGTCCACCGAGTTCGAACAG
TTCGCCCTCTGCATCCTCCAAAAACACAACTGCCTCCGAAACCAAGCCGC
CATCCCCATGTCCCCCGACCCAGCCCCGATCACCCATTTTCGCGGCGAGA
AACTTACGCATGAGATGGCGGAAGAAATTCAATTCGGGCACCTAGGAGGA
CTTCAGCAGAAGCTACCCTGGAGTTGGAAGGTCATCAGTGGAGTCAACCC
TGCATACGACTTCTTCCCTTCCCAGCACATGACGTACTACCAGAAAGGCA
AAGCCCTGTGGTACCAGCCGGTTTTCCGGGTGATTACCTTTGACGGAAAG
CAGGTCTGGAGGCGCAGGCTGTATCGTGTCCGGAGGGCCAAGGTGCCGGG
AACCTTCTACTATACTGTGCTAGACAACGGTGTAACGTCTTCAGAATTCT
GGCGAATCATCGACGCCGCGGAAGACATGTCCTGGGTTCTCTTCTACTAC
TCAGGAGCTGCTGCTGCTGCTGGTCAATCTTACACGGGAGCGATCCTCGC
TTCCCCTACAGGGGAGTGGCCAGCAGGACCAGAAGAAAGCTACAAGCCAA
GAATATTGGCGGCATTGGATAGGGCAGGAATTAAGGAGTGGGAACTGTTT
AAAGTGAATCATGGTAGCTCGGAGGGGGCCCCGCTAGAGATCGATCCGTT
GGCGGAGAGACGGTTCATGTACCCGGGGTGGGCGGGGGCGAAGAAGGCGG
AGGCTAGTGCTGGTGGAAGCAAGGAGGAAGAGGCGGTAGCTGTGGCGTAG
AATCTATCGGGCTGAATTGTTCTCGGATGGGGTTGATTTACGTTCCTTGC
CGTGAGGAAAGAAAAGTATGAGGTAGGACGGGGGTTGGGGCTTATTTATG
AACGTTTGGGGGCTAGAGACATGGAAACTGAGAAGGGAAGGAAACCGATG
GATTCGAAGCCATGTGTCTTGTTTCTGTTGTAATGTACACTATCTAGCAA
CAAGGCCGAATACACGAAGCGGCAAATAGCTGGAGAAGCAGCACCAGCAG
TGCCCCGGCAGCAAATAGCAGCAAGAAGAGTCACTGAGAAGACGCTCAAC
TTATCAAAAATAAACTCCCCACCGTCATTGTCGTATTTGTAGATTGTCCA
TGTATAGGCAGATAGACGGGAAGAGAGGTGGATGAGGGAAGAAAAAGGAA
CACGATACCCAAGAAGAAGAAGATGAAGAAATAAGGGCGACGCGAAGGAC
AGGAAGATGAATAACGAGGGACAGTAGCCATTTTATTGATCCGCATTGCT
CGCACCCGGGATTGGACATCGCATGCAGAATAGGAGAGACGCACAAAAAC
AAAGCAACTTGGAAGAGATGGGGTATTTTTGACAACTCTCCCGGTTAACA
AAGTGGCGACAAAGCTACCTAGTAAAAACAAGACGCGACATAATGGATGA
GAAACATCGAATGTGACGGGAAACAAACTTGTCATTCATTTTCTCCTTCA
TCTTCTTCATCTTCTTCTTCTTCTTCTCCTTCTTCTCTTCTTTTTTCTTC
TTCTTCTTCTTCTTCTTC

protein sequence of NO08G01830.1

>NO08G01830.1-protein ID=NO08G01830.1-protein|Name=NO08G01830.1|organism=Nannochloropsis oceanica|type=polypeptide|length=679bp
MTRHRQHDLRRARASTTPTSRNHRRRTTTTISTTTLKFLLLAICLGACMC
SAFFYSPPILKRKAAPPPASSSTSSSSSAAAAAADYEKAHALVAAARPKT
PIFWVAPLLMRLWKNKPSTSKRSGAKGSDCGGDFGGCRCGEGGGVHGSWM
SSATVLAASASSSADNMSPSGFSSTKTIAGPSKPVHVVTVVPGNGARGTL
EAPWTEVMEHMHRRMQYVSPAFSLHVVTEEDLLTRGLAALADLPVPASTE
HARKTSSLNHPDILYFCKTQNPAIAPLLQHYIAQVPHVLALDSCPILTRK
TRIGPARPYGPLAGFWKALPLPTERKRLLTLFETVQGFWERGHSDDILYC
VLVVINAVLVDIPAVSEILKPVTFQALQCMLTNCGKQIVDCQRNPACKAA
LACLESCPPNDQVCRYRCIVQYESTEFEQFALCILQKHNCLRNQAAIPMS
PDPAPITHFRGEKLTHEMAEEIQFGHLGGLQQKLPWSWKVISGVNPAYDF
FPSQHMTYYQKGKALWYQPVFRVITFDGKQVWRRRLYRVRRAKVPGTFYY
TVLDNGVTSSEFWRIIDAAEDMSWVLFYYSGAAAAAGQSYTGAILASPTG
EWPAGPEESYKPRILAALDRAGIKEWELFKVNHGSSEGAPLEIDPLAERR
FMYPGWAGAKKAEASAGGSKEEEAVAVA*

mRNA from alignment at chr8:558780..562941+

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO08G01830.1 ID=NO08G01830.1|Name=NO08G01830.1|organism=Nannochloropsis oceanica|type=mRNA|length=4162bp|location=Sequence derived from alignment at chr8:558780..562941+ (Nannochloropsis oceanica)
AAGAGAGAACTGCCTTAGCTGTCTTTATGTATTGTATAGTTGTGGACGTG
TTTGGGAAGACGGGGCGTGAAAATGTGCATGTAGGACGTGTGGAACTCGC
CACGCTGCTAGAGCAGGAACAACACGAAGAAAGGGCCTGTTCCCCCACGC
GTCCCCTAGAAATCATAAACGGGTCCCAAATGTCTGAAAATTCACACATT
GTTCCTTCGGCAGAAACTGTGCTTCAGCAGGCTCCCTGAGGACACATGAG
TTGCCGGGACAAGCGGGTCAAAATGCTGGGCTCGTCGGGAAGTGTCCCAA
ATGTAGGATGCTGCAGACATAGCCGTGGAGCAGGAGGCTGTCAGGCAGCA
CAAATATCCTTCCCGCTATGCAGAATACATACATTCGTGCGCCTCCGAAA
CCTTTTACTGAAGATTATGATGGTATGAGAGCGTGTAAAACTTGAGGCAA
GGTAAGGAACAACAGATTTTGCCTCATCTCCAGTCCAATAGTACAAGCTA
ATCGAGCCGCTTTCTTACAGGGAGTCTGCGTCAGCACAACTGAATGCTCC
TTGTTCTGATTACAGCTTCAATAAACCTCTATATTCCGATACATAGCCGC
ACAGAGCCTCACAACATTTCTTTTGCCTTGTCAACGCATTTGGCTGGGAT
ATGGGCTTGAAAATCGGCCCAGAAAGAGTCCACTCTTGCTTCGTTCGCAC
GTCGCACTTTTTACTATAGTAGTAAAAGACGGTATTTTGAATCGACGTTA
CGATGCGGAGGCTCGTGACAGAAGGAGTATGACCCAAGAGGCGCAACCTG
CCAGCCCATTTCCCACCTTCGTTATATCCCATTGTCCGCGTCACTTGACA
TGACATGCACTCCCATGAATTGTGCCTTTGTTCTTCCCCACCCTGGAACG
GGCATCACAAGTGTCAACACATTCCCGCATCCTCGACAGGCCTTTGCAAG
GCATCATCATGACTCGACACCGGCAACACGACCTACGGCGAGCTCGAGCA
AGCACAACACCAACTTCGAGGAACCATAGGCGAAGAACGACGACGACAAT
ATCGACCACCACTCTGAAGTTCCTACTATTGGCTATCTGCCTGGGTGCCT
GCATGTGTTCGGCTTTCTTCTATTCGCCTCCCATCTTAAAACGCAAGGCA
GCTCCACCCCCTGCCTCCTCCTCGACGTCCTCCTCCTCTTCTGCCGCCGC
TGCAGCTGCAGATTACGAAAAAGCGCATGCATTGGTCGCTGCAGCCCGAC
CCAAAACTCCTATTTTTTGGGTGGCGCCATTGCTCATGCGCTTGTGGAAA
AACAAGCCGAGCACCAGCAAGCGTAGCGGCGCCAAGGGCAGCGATTGTGG
GGGTGATTTTGGCGGGTGTCGGTGTGGGGAAGGAGGAGGGGTGCATGGCA
GTTGGATGAGCAGCGCCACGGTCTTGGCGGCGAGTGCCTCGTCTTCGGCA
GACAACATGTCACCAAGTGGATTTTCTTCGACGAAAACAATTGCTGGCCC
TTCCAAGCCCGTGCACGTGGTAACGGTCGTCCCAGGGAATGGGGCAAGGG
GGACGCTGGAAGCACCATGGACGGAAGTCATGGAGCATATGCATCGCCGG
ATGCAGTACGTGAGTCCTGCCTTCTCCCTGCATGTTGTGACAGAGGAAGA
CTTACTGACTCGTGGATTGGCAGCCTTGGCCGACCTCCCCGTCCCTGCCT
CCACCGAGCACGCACGCAAAACTTCCTCCCTCAACCACCCAGACATCCTC
TACTTCTGCAAAACCCAAAATCCCGCCATTGCTCCTTTGCTACAGCACTA
CATCGCCCAGGTTCCTCACGTTCTCGCCCTTGACTCCTGCCCTATTTTGA
CCCGAAAGACGCGGATTGGTCCTGCACGTCCCTACGGACCTTTGGCGGGG
TTTTGGAAGGCCCTCCCTTTGCCAACAGAGAGGAAGAGGCTGTTGACTTT
GTTTGAAACTGTCCAGGGATTTTGGGAACGGGGGCATAGCGATGATATAC
TTTATTGTGTGTTGGTGGTAATCAATGCCGTGCTGGTCGATATCCCGGCG
GTGTCGGAGATACTGAAGCCTGTGACTTTTCAGGCCTTGCAATGCATGTT
GACGAATTGCGGGAAGCAGATTGTGGATTGTCAGAGGAATCCAGCGTGTA
AAGCGGCCTTAGCCTGCCTAGAGAGCTGTCCACCCAACGATCAAGTCTGT
CGGTACCGCTGCATCGTCCAATACGAGTCCACCGAGTTCGAACAGTTCGC
CCTCTGCATCCTCCAAAAACACAACTGCCTCCGAAACCAAGCCGCCATCC
CCATGTCCCCCGACCCAGCCCCGATCACCCATTTTCGCGGCGAGAAACTT
ACGCATGAGATGGCGGAAGAAATTCAATTCGGGCACCTAGGAGGACTTCA
GCAGAAGCTACCCTGGAGTTGGAAGGTCATCAGTGGAGTCAACCCGTACG
TCATTCCCTCCTTTCCCTTCCCCCAACCCACCTCTATTGTGCCATTTACC
TTGCTAACCCGCTCTTTTCCCTTCCTCGCTCTCTGAAGTGCATACGACTT
CTTCCCTTCCCAGCACATGACGTACTACCAGAAAGGCAAAGCCCTGTGGT
ACCAGCCGGTTTTCCGGGTGATTACCTTTGACGGAAAGCAGGTCTGGAGG
CGCAGGCTGTATCGTGTCCGGAGGGCCAAGGTGCCGGGAACCTTCTACTA
TACTGTGAGTGACGATAAGAGGAGGAAGGCGGAGAAGAGAGGCAAAGAGG
AGGGGCTGTTTGGTTTGTTTGATTGATCGCGGGTCTAGCGGTTCTGACTG
TATCGCGTGCGAAGGCCTTGGGTCCCCAGAACCATTTATTACAATATATG
TATGGGGGTGGAGAAGGGAGGGAAGTAGGAAGGGGCAGAAGTGCGTCGAT
AGTGCACTGTTCTGGATTTGGCGACCCACCATACCCACCGCAAGATAATG
ATCATCTCATCTTTCCTCCTTTATCTCCACTTTTCTCGCCTTTTCTTCAA
CCCAATACAGGTGCTAGACAACGGTGTAACGTCTTCAGAATTCTGGCGAA
TCATCGACGCCGCGGAAGACATGTCCTGGGTTCTCTTCTACTACTCAGGA
GCTGCTGCTGCTGCTGGTCAATCTTACACGGGAGCGATCCTCGCTTCCCC
TACAGGGGAGTGGCCAGCAGGACCAGAAGAAAGCTACAAGCCAAGAATAT
TGGCGGCATTGGATAGGGCAGGAATTAAGGAGTGGGAACTGTTTAAAGTG
AATCATGGTAGCTCGGAGGGGGCCCCGCTAGAGATCGATCCGTTGGCGGA
GAGACGGTTCATGTACCCGGGGTGGGCGGGGGCGAAGAAGGCGGAGGCTA
GTGCTGGTGGAAGCAAGGAGGAAGAGGCGGTAGCTGTGGCGTAGAATCTA
TCGGGCTGAATTGTTCTCGGATGGGGTTGATTTACGTTCCTTGCCGTGAG
GAAAGAAAAGTATGAGGTAGGACGGGGGTTGGGGCTTATTTATGAACGTT
TGGGGGCTAGAGACATGGAAACTGAGAAGGGAAGGAAACCGATGGATTCG
AAGCCATGTGTCTTGTTTCTGTTGTAATGTACACTATCTAGCAACAAGGC
CGAATACACGAAGCGGCAAATAGCTGGAGAAGCAGCACCAGCAGTGCCCC
GGCAGCAAATAGCAGCAAGAAGAGTCACTGAGAAGACGCTCAACTTATCA
AAAATAAACTCCCCACCGTCATTGTCGTATTTGTAGATTGTCCATGTATA
GGCAGATAGACGGGAAGAGAGGTGGATGAGGGAAGAAAAAGGAACACGAT
ACCCAAGAAGAAGAAGATGAAGAAATAAGGGCGACGCGAAGGACAGGAAG
ATGAATAACGAGGGACAGTAGCCATTTTATTGATCCGCATTGCTCGCACC
CGGGATTGGACATCGCATGCAGAATAGGAGAGACGCACAAAAACAAAGCA
ACTTGGAAGAGATGGGGTATTTTTGACAACTCTCCCGGTTAACAAAGTGG
CGACAAAGCTACCTAGTAAAAACAAGACGCGACATAATGGATGAGAAACA
TCGAATGTGACGGGAAACAAACTTGTCATTCATTTTCTCCTTCATCTTCT
TCATCTTCTTCTTCTTCTTCTCCTTCTTCTCTTCTTTTTTCTTCTTCTTC
TTCTTCTTCTTC

Coding sequence (CDS) from alignment at chr8:558780..562941+

>NO08G01830.1 ID=NO08G01830.1|Name=NO08G01830.1|organism=Nannochloropsis oceanica|type=CDS|length=2037bp|location=Sequence derived from alignment at chr8:558780..562941+ (Nannochloropsis oceanica)
ATGACTCGACACCGGCAACACGACCTACGGCGAGCTCGAGCAAGCACAAC
ACCAACTTCGAGGAACCATAGGCGAAGAACGACGACGACAATATCGACCA
CCACTCTGAAGTTCCTACTATTGGCTATCTGCCTGGGTGCCTGCATGTGT
TCGGCTTTCTTCTATTCGCCTCCCATCTTAAAACGCAAGGCAGCTCCACC
CCCTGCCTCCTCCTCGACGTCCTCCTCCTCTTCTGCCGCCGCTGCAGCTG
CAGATTACGAAAAAGCGCATGCATTGGTCGCTGCAGCCCGACCCAAAACT
CCTATTTTTTGGGTGGCGCCATTGCTCATGCGCTTGTGGAAAAACAAGCC
GAGCACCAGCAAGCGTAGCGGCGCCAAGGGCAGCGATTGTGGGGGTGATT
TTGGCGGGTGTCGGTGTGGGGAAGGAGGAGGGGTGCATGGCAGTTGGATG
AGCAGCGCCACGGTCTTGGCGGCGAGTGCCTCGTCTTCGGCAGACAACAT
GTCACCAAGTGGATTTTCTTCGACGAAAACAATTGCTGGCCCTTCCAAGC
CCGTGCACGTGGTAACGGTCGTCCCAGGGAATGGGGCAAGGGGGACGCTG
GAAGCACCATGGACGGAAGTCATGGAGCATATGCATCGCCGGATGCAGTA
CGTGAGTCCTGCCTTCTCCCTGCATGTTGTGACAGAGGAAGACTTACTGA
CTCGTGGATTGGCAGCCTTGGCCGACCTCCCCGTCCCTGCCTCCACCGAG
CACGCACGCAAAACTTCCTCCCTCAACCACCCAGACATCCTCTACTTCTG
CAAAACCCAAAATCCCGCCATTGCTCCTTTGCTACAGCACTACATCGCCC
AGGTTCCTCACGTTCTCGCCCTTGACTCCTGCCCTATTTTGACCCGAAAG
ACGCGGATTGGTCCTGCACGTCCCTACGGACCTTTGGCGGGGTTTTGGAA
GGCCCTCCCTTTGCCAACAGAGAGGAAGAGGCTGTTGACTTTGTTTGAAA
CTGTCCAGGGATTTTGGGAACGGGGGCATAGCGATGATATACTTTATTGT
GTGTTGGTGGTAATCAATGCCGTGCTGGTCGATATCCCGGCGGTGTCGGA
GATACTGAAGCCTGTGACTTTTCAGGCCTTGCAATGCATGTTGACGAATT
GCGGGAAGCAGATTGTGGATTGTCAGAGGAATCCAGCGTGTAAAGCGGCC
TTAGCCTGCCTAGAGAGCTGTCCACCCAACGATCAAGTCTGTCGGTACCG
CTGCATCGTCCAATACGAGTCCACCGAGTTCGAACAGTTCGCCCTCTGCA
TCCTCCAAAAACACAACTGCCTCCGAAACCAAGCCGCCATCCCCATGTCC
CCCGACCCAGCCCCGATCACCCATTTTCGCGGCGAGAAACTTACGCATGA
GATGGCGGAAGAAATTCAATTCGGGCACCTAGGAGGACTTCAGCAGAAGC
TACCCTGGAGTTGGAAGGTCATCAGTGGAGTCAACCCTGCATACGACTTC
TTCCCTTCCCAGCACATGACGTACTACCAGAAAGGCAAAGCCCTGTGGTA
CCAGCCGGTTTTCCGGGTGATTACCTTTGACGGAAAGCAGGTCTGGAGGC
GCAGGCTGTATCGTGTCCGGAGGGCCAAGGTGCCGGGAACCTTCTACTAT
ACTGTGCTAGACAACGGTGTAACGTCTTCAGAATTCTGGCGAATCATCGA
CGCCGCGGAAGACATGTCCTGGGTTCTCTTCTACTACTCAGGAGCTGCTG
CTGCTGCTGGTCAATCTTACACGGGAGCGATCCTCGCTTCCCCTACAGGG
GAGTGGCCAGCAGGACCAGAAGAAAGCTACAAGCCAAGAATATTGGCGGC
ATTGGATAGGGCAGGAATTAAGGAGTGGGAACTGTTTAAAGTGAATCATG
GTAGCTCGGAGGGGGCCCCGCTAGAGATCGATCCGTTGGCGGAGAGACGG
TTCATGTACCCGGGGTGGGCGGGGGCGAAGAAGGCGGAGGCTAGTGCTGG
TGGAAGCAAGGAGGAAGAGGCGGTAGCTGTGGCGTAG

Synonyms

Publications