NO08G01130.1, NO08G01130.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO08G01130.1
Unique NameNO08G01130.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2352
Alignment locationchr8:355463..357995 +

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Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr8genomechr8:355463..357995 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
BLAST of NO08G01130.1 vs.
Match: EWM26712.1 (phosphatidylinositol class b [Nannochloropsis gaditana])

HSP 1 Score: 247.3 bits (630), Expect = 1.500e-61
Identity = 140/242 (57.85%), Postives = 172/242 (71.07%), Query Frame = 0
Query:  146 GGGGEQGGRGEAVGKWALFFQCSNWFMWYAGVRTFSSSFEMALLVPAVYHWLSLVEWISRIKEQGNKEAEEGKGAVYLPAGRVSWEEPLALVLGALSIIVRPTALFAWLPLGLWRMFHTRFVDMPRYLVMVVLPWTGLVLAGAVLLDSHCYSLLSQSLGAATSSSASVSSPSSSLSNW-LVFTPLNFLRVNLVADVASQYGTHPFHWYFTLGGLSVLTTHLPFLLLGLRRA-----FFSSSP 382
            G G +   R E + + ALF QCSNWFMWYAGVRTFSSS EMALLVPAVYHW++LVE    I E GN+++       YLP  RV   EPL++VLG +SI+VRPTALFAW+PLG WR+  TR  D+P+YL+ VVL WT LV+  + LLDS+CY+ +S  L  A ++       +S++  W  VFTP+NFLR+NLVA VA QYG+HPFHWYFTLG L+VLTT LPF+L GLRRA     FF  SP
Sbjct:  509 GDGDDAIARAETIARCALFCQCSNWFMWYAGVRTFSSSLEMALLVPAVYHWVALVERAESI-EGGNRKSPR-----YLPPSRVGMTEPLSIVLGTVSIMVRPTALFAWVPLGFWRLSCTRLYDIPQYLLRVVLFWTVLVMLVSTLLDSYCYNRVS-VLDQARNAGPGAHPTASTVPQWEWVFTPINFLRINLVAGVAVQYGSHPFHWYFTLGALTVLTTQLPFVLFGLRRALCRNRFFVWSP 743          
The following BLAST results are available for this feature:
BLAST of NO08G01130.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1
Match NameE-valueIdentityDescription
EWM26712.11.500e-6157.85phosphatidylinositol class b [Nannochloropsis gadi... [more]
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO08G01130NO08G01130Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO08G01130.1NO08G01130.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO08G01130.1.cds1NO08G01130.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO08G01130.1.cds2NO08G01130.1.cds2Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO08G01130.1 ID=NO08G01130.1|Name=NO08G01130.1|organism=Nannochloropsis oceanica|type=mRNA|length=2352bp
ATGAACGCCTGGACTGTCCGGACTTATTTTAACCCTGACGAGTACTGGCA
AGGCCCAGAGGTGGCTCACGTGCTTGTATTTGGCGCGGGTTACCTGACAT
GGGAATGGCAAATAGCACACATTCGTTCCTTTCTACATCCGTTGCTCTTC
ACGGTCTTCTATGCTCTGCTAAAAGCATCCGGGTTCGCCACCCGCGGTGC
TGTCGCTTATGGGCCCTCGGTGGTCGTCCAAGCCCTGCTTACTGCAACGA
CTGACATGTATGTCTACTGGTTGGGAAAACGCGTGGCGACACCATGCAGA
GGAGGAGGAGGAAGAAGAGGAGGAGGAGCTAGAGTAGGAATTAGAGGAGA
AGGAGGAGGAGGAGGCGGCGGCGGCGGCGGCGGAGGAGGAGGAGGAGGAG
GAGGAGGAGGAGGAGGAGGAGGAGGAGGAAGAGGAGGAGGAGGAGGAGAG
CAGGGAGGGAGGGGAGAGGCTGTAGGGAAGTGGGCCTTGTTCTTCCAGTG
CAGTAATTGGTTCATGTGGTATGCAGGGGTGAGAACTTTCTCGTCTTCCT
TTGAAATGGCCTTGCTTGTCCCTGCCGTGTACCACTGGTTGAGCCTCGTC
GAGTGGATATCAAGGATCAAGGAACAGGGAAATAAAGAAGCAGAAGAGGG
GAAGGGAGCAGTGTACCTTCCAGCTGGTCGTGTGTCGTGGGAAGAGCCCT
TGGCGTTGGTGCTCGGTGCACTCTCTATCATTGTCCGACCCACCGCCCTG
TTCGCATGGCTACCCCTGGGGCTATGGCGGATGTTTCACACACGCTTCGT
TGACATGCCGCGGTATCTCGTTATGGTGGTGCTGCCATGGACGGGCTTGG
TCTTGGCAGGGGCCGTGCTGTTAGACTCTCACTGCTACAGCCTCCTTTCT
CAGTCCCTCGGCGCTGCCACCTCCTCCTCCGCCTCTGTTTCCTCCCCTTC
CTCCTCTCTTAGTAACTGGTTGGTATTTACTCCATTGAATTTTCTTCGTG
TCAACCTTGTTGCTGACGTGGCTTCCCAGTATGGAACGCACCCCTTCCAC
TGGTATTTCACTCTAGGGGGACTCTCTGTTCTGACCACACACCTACCCTT
CCTCCTCCTCGGCCTGCGTCGCGCTTTCTTCTCTTCCTCCCCTTCCTTTT
TCTTGCCGTCATCCTCTTCAACACCGTCCTCCTCCTCTTTCTCTTCTACT
TCTTCTTTATCTTCTTCCTCCTCCTCCTCCTCTCCCTCCTCCTCGTCGTC
GTCGTCGTCGTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCAA
CCTCTCTATGGCTGTTGGCGTTGGTGGTGCTAATCTATCCCTTAGGCCTC
TCACTCTCCCCCCACAAGGAGTTCCGCTTCCTCCTTCCTATCCTTCCCCT
AGCCTTCGTGCTGGCCGGGGCAGCATTCGTAATAGACACGCTACCCCCTC
CACCCTTCCCACCCCTTACCTCCTCTTGTTCACTCTCCACTTTACCCAAC
GTGAAAAGTCGAAGAAGAAAGACGGAACGGTGGTCTTTCTTTTCTCTCGT
CCTCTTTCTCGTCCTCACGCATGCTCCCGTTGCCTTTTATTTTTCCCGAG
TCCACCAACGGGGTCCAATTGATGTGATGAGCTTCTTGTCTGACCGACTC
CAGGCAGATATGCGATTGGAGCAGCAACAGCAACAGCAGCAGCAGCAGCA
GAGAGGGAAGGGGGGTAATGACGTGCGGATTGACTTTCTAATGCCTTGTC
ATGCCACGCCCTGGACGACGCACTTGCACGTGCCTGCCTTCTTCTCTTCC
TCCCTTTCCGCTCATCCTCCCTCACTTCCTCCCCGGCACCTTTTCCTCCA
CCACCTCGATTGCTTGCCCAACCTTTACGGCCACGCGTCGTACCGAACGA
CAACCGCTGAGTTTCTCCTCGACCCGCTAGGGTATGTCGCGCAACGTTAT
GGAGAGAAAAGCAACAGCAACAGCAGCAGCAGCAGCAGCAAGAGCGGTAG
CAGCAACACCAGCAGCGGAAGGTTGGAAGGCACACCTTTCTCCCCCCTGC
CCTGTCTTCTTCCAGATTATATCGTTTCCTTCGGCTCAGCAGCTTGGAAA
ATGGAGCAACTTTTGGTGTCCATCGGCTTTCACGTTGAGGCAACTCTTTT
TCATTCTTCATTCAAAGGGGACGTGGACAGCCCAAGGTCTGAGGAAAATA
TCGTTATTTTCTCCTTTGATCGCGGGCGTGGGAGCGCGGGGCATCGTAAT
CTATCTTTTATTGAGGCCAAGGAGGAGCTGTAAAAAGTAGGGGGGAGGGG
AGGGAGCAATACTAGGAATAGAATATCAATGCAAGGTAAAAATAGCAGCG
AC
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protein sequence of NO08G01130.1

>NO08G01130.1-protein ID=NO08G01130.1-protein|Name=NO08G01130.1|organism=Nannochloropsis oceanica|type=polypeptide|length=761bp
MNAWTVRTYFNPDEYWQGPEVAHVLVFGAGYLTWEWQIAHIRSFLHPLLF
TVFYALLKASGFATRGAVAYGPSVVVQALLTATTDMYVYWLGKRVATPCR
GGGGRRGGGARVGIRGEGGGGGGGGGGGGGGGGGGGGGGGGGGRGGGGGE
QGGRGEAVGKWALFFQCSNWFMWYAGVRTFSSSFEMALLVPAVYHWLSLV
EWISRIKEQGNKEAEEGKGAVYLPAGRVSWEEPLALVLGALSIIVRPTAL
FAWLPLGLWRMFHTRFVDMPRYLVMVVLPWTGLVLAGAVLLDSHCYSLLS
QSLGAATSSSASVSSPSSSLSNWLVFTPLNFLRVNLVADVASQYGTHPFH
WYFTLGGLSVLTTHLPFLLLGLRRAFFSSSPSFFLPSSSSTPSSSSFSST
SSLSSSSSSSSPSSSSSSSSSSSSSSSSSSSSSTSLWLLALVVLIYPLGL
SLSPHKEFRFLLPILPLAFVLAGAAFVIDTLPPPPFPPLTSSCSLSTLPN
VKSRRRKTERWSFFSLVLFLVLTHAPVAFYFSRVHQRGPIDVMSFLSDRL
QADMRLEQQQQQQQQQQRGKGGNDVRIDFLMPCHATPWTTHLHVPAFFSS
SLSAHPPSLPPRHLFLHHLDCLPNLYGHASYRTTTAEFLLDPLGYVAQRY
GEKSNSNSSSSSSKSGSSNTSSGRLEGTPFSPLPCLLPDYIVSFGSAAWK
MEQLLVSIGFHVEATLFHSSFKGDVDSPRSEENIVIFSFDRGRGSAGHRN
LSFIEAKEEL*
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mRNA from alignment at chr8:355463..357995+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO08G01130.1 ID=NO08G01130.1|Name=NO08G01130.1|organism=Nannochloropsis oceanica|type=mRNA|length=2533bp|location=Sequence derived from alignment at chr8:355463..357995+ (Nannochloropsis oceanica)
ATGAACGCCTGGACTGTCCGGACTTATTTTAACCCTGACGAGTACTGGCA AGGCCCAGAGGTGGCTCACGTGCTTGTATTTGGCGCGGGTTACCTGTAAG TCTACGTATATTGTGCAATGACGCCTCTATGTAGCGTCTTCGAGATGTGG GCAACTCTCTCACTCACCCTCGCTTGTTCCTGACAGAGTCCCGGTGCATT TGACCACCCGCGAGCCCTCCCCCATTGACCTCTCACTTCATTTCCTCTTG ACGCATATTCATAAATATACAAACAGGACATGGGAATGGCAAATAGCACA CATTCGTTCCTTTCTACATCCGTTGCTCTTCACGGTCTTCTATGCTCTGC TAAAAGCATCCGGGTTCGCCACCCGCGGTGCTGTCGCTTATGGGCCCTCG GTGGTCGTCCAAGCCCTGCTTACTGCAACGACTGACATGTATGTCTACTG GTTGGGAAAACGCGTGGCGACACCATGCAGAGGAGGAGGAGGAAGAAGAG GAGGAGGAGCTAGAGTAGGAATTAGAGGAGAAGGAGGAGGAGGAGGCGGC GGCGGCGGCGGCGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGG AGGAGGAGGAAGAGGAGGAGGAGGAGGAGAGCAGGGAGGGAGGGGAGAGG CTGTAGGGAAGTGGGCCTTGTTCTTCCAGTGCAGTAATTGGTTCATGTGG TATGCAGGGGTGAGAACTTTCTCGTCTTCCTTTGAAATGGCCTTGCTTGT CCCTGCCGTGTACCACTGGTTGAGCCTCGTCGAGTGGATATCAAGGATCA AGGAACAGGGAAATAAAGAAGCAGAAGAGGGGAAGGGAGCAGTGTACCTT CCAGCTGGTCGTGTGTCGTGGGAAGAGCCCTTGGCGTTGGTGCTCGGTGC ACTCTCTATCATTGTCCGACCCACCGCCCTGTTCGCATGGCTACCCCTGG GGCTATGGCGGATGTTTCACACACGCTTCGTTGACATGCCGCGGTATCTC GTTATGGTGGTGCTGCCATGGACGGGCTTGGTCTTGGCAGGGGCCGTGCT GTTAGACTCTCACTGCTACAGCCTCCTTTCTCAGTCCCTCGGCGCTGCCA CCTCCTCCTCCGCCTCTGTTTCCTCCCCTTCCTCCTCTCTTAGTAACTGG TTGGTATTTACTCCATTGAATTTTCTTCGTGTCAACCTTGTTGCTGACGT GGCTTCCCAGTATGGAACGCACCCCTTCCACTGGTATTTCACTCTAGGGG GACTCTCTGTTCTGACCACACACCTACCCTTCCTCCTCCTCGGCCTGCGT CGCGCTTTCTTCTCTTCCTCCCCTTCCTTTTTCTTGCCGTCATCCTCTTC AACACCGTCCTCCTCCTCTTTCTCTTCTACTTCTTCTTTATCTTCTTCCT CCTCCTCCTCCTCTCCCTCCTCCTCGTCGTCGTCGTCGTCGTCCTCCTCC TCCTCCTCCTCCTCCTCCTCCTCCTCCTCAACCTCTCTATGGCTGTTGGC GTTGGTGGTGCTAATCTATCCCTTAGGCCTCTCACTCTCCCCCCACAAGG AGTTCCGCTTCCTCCTTCCTATCCTTCCCCTAGCCTTCGTGCTGGCCGGG GCAGCATTCGTAATAGACACGCTACCCCCTCCACCCTTCCCACCCCTTAC CTCCTCTTGTTCACTCTCCACTTTACCCAACGTGAAAAGTCGAAGAAGAA AGACGGAACGGTGGTCTTTCTTTTCTCTCGTCCTCTTTCTCGTCCTCACG CATGCTCCCGTTGCCTTTTATTTTTCCCGAGTCCACCAACGGGGTCCAAT TGATGTGATGAGCTTCTTGTCTGACCGACTCCAGGCAGATATGCGATTGG AGCAGCAACAGCAACAGCAGCAGCAGCAGCAGAGAGGGAAGGGGGGTAAT GACGTGCGGATTGACTTTCTAATGCCTTGTCATGCCACGCCCTGGACGAC GCACTTGCACGTGCCTGCCTTCTTCTCTTCCTCCCTTTCCGCTCATCCTC CCTCACTTCCTCCCCGGCACCTTTTCCTCCACCACCTCGATTGCTTGCCC AACCTTTACGGCCACGCGTCGTACCGAACGACAACCGCTGAGTTTCTCCT CGACCCGCTAGGGTATGTCGCGCAACGTTATGGAGAGAAAAGCAACAGCA ACAGCAGCAGCAGCAGCAGCAAGAGCGGTAGCAGCAACACCAGCAGCGGA AGGTTGGAAGGCACACCTTTCTCCCCCCTGCCCTGTCTTCTTCCAGATTA TATCGTTTCCTTCGGCTCAGCAGCTTGGAAAATGGAGCAACTTTTGGTGT CCATCGGCTTTCACGTTGAGGCAACTCTTTTTCATTCTTCATTCAAAGGG GACGTGGACAGCCCAAGGTCTGAGGAAAATATCGTTATTTTCTCCTTTGA TCGCGGGCGTGGGAGCGCGGGGCATCGTAATCTATCTTTTATTGAGGCCA AGGAGGAGCTGTAAAAAGTAGGGGGGAGGGGAGGGAGCAATACTAGGAAT AGAATATCAATGCAAGGTAAAAATAGCAGCGAC
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Coding sequence (CDS) from alignment at chr8:355463..357995+

>NO08G01130.1 ID=NO08G01130.1|Name=NO08G01130.1|organism=Nannochloropsis oceanica|type=CDS|length=2283bp|location=Sequence derived from alignment at chr8:355463..357995+ (Nannochloropsis oceanica)
ATGAACGCCTGGACTGTCCGGACTTATTTTAACCCTGACGAGTACTGGCA
AGGCCCAGAGGTGGCTCACGTGCTTGTATTTGGCGCGGGTTACCTGACAT
GGGAATGGCAAATAGCACACATTCGTTCCTTTCTACATCCGTTGCTCTTC
ACGGTCTTCTATGCTCTGCTAAAAGCATCCGGGTTCGCCACCCGCGGTGC
TGTCGCTTATGGGCCCTCGGTGGTCGTCCAAGCCCTGCTTACTGCAACGA
CTGACATGTATGTCTACTGGTTGGGAAAACGCGTGGCGACACCATGCAGA
GGAGGAGGAGGAAGAAGAGGAGGAGGAGCTAGAGTAGGAATTAGAGGAGA
AGGAGGAGGAGGAGGCGGCGGCGGCGGCGGCGGAGGAGGAGGAGGAGGAG
GAGGAGGAGGAGGAGGAGGAGGAGGAGGAAGAGGAGGAGGAGGAGGAGAG
CAGGGAGGGAGGGGAGAGGCTGTAGGGAAGTGGGCCTTGTTCTTCCAGTG
CAGTAATTGGTTCATGTGGTATGCAGGGGTGAGAACTTTCTCGTCTTCCT
TTGAAATGGCCTTGCTTGTCCCTGCCGTGTACCACTGGTTGAGCCTCGTC
GAGTGGATATCAAGGATCAAGGAACAGGGAAATAAAGAAGCAGAAGAGGG
GAAGGGAGCAGTGTACCTTCCAGCTGGTCGTGTGTCGTGGGAAGAGCCCT
TGGCGTTGGTGCTCGGTGCACTCTCTATCATTGTCCGACCCACCGCCCTG
TTCGCATGGCTACCCCTGGGGCTATGGCGGATGTTTCACACACGCTTCGT
TGACATGCCGCGGTATCTCGTTATGGTGGTGCTGCCATGGACGGGCTTGG
TCTTGGCAGGGGCCGTGCTGTTAGACTCTCACTGCTACAGCCTCCTTTCT
CAGTCCCTCGGCGCTGCCACCTCCTCCTCCGCCTCTGTTTCCTCCCCTTC
CTCCTCTCTTAGTAACTGGTTGGTATTTACTCCATTGAATTTTCTTCGTG
TCAACCTTGTTGCTGACGTGGCTTCCCAGTATGGAACGCACCCCTTCCAC
TGGTATTTCACTCTAGGGGGACTCTCTGTTCTGACCACACACCTACCCTT
CCTCCTCCTCGGCCTGCGTCGCGCTTTCTTCTCTTCCTCCCCTTCCTTTT
TCTTGCCGTCATCCTCTTCAACACCGTCCTCCTCCTCTTTCTCTTCTACT
TCTTCTTTATCTTCTTCCTCCTCCTCCTCCTCTCCCTCCTCCTCGTCGTC
GTCGTCGTCGTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCAA
CCTCTCTATGGCTGTTGGCGTTGGTGGTGCTAATCTATCCCTTAGGCCTC
TCACTCTCCCCCCACAAGGAGTTCCGCTTCCTCCTTCCTATCCTTCCCCT
AGCCTTCGTGCTGGCCGGGGCAGCATTCGTAATAGACACGCTACCCCCTC
CACCCTTCCCACCCCTTACCTCCTCTTGTTCACTCTCCACTTTACCCAAC
GTGAAAAGTCGAAGAAGAAAGACGGAACGGTGGTCTTTCTTTTCTCTCGT
CCTCTTTCTCGTCCTCACGCATGCTCCCGTTGCCTTTTATTTTTCCCGAG
TCCACCAACGGGGTCCAATTGATGTGATGAGCTTCTTGTCTGACCGACTC
CAGGCAGATATGCGATTGGAGCAGCAACAGCAACAGCAGCAGCAGCAGCA
GAGAGGGAAGGGGGGTAATGACGTGCGGATTGACTTTCTAATGCCTTGTC
ATGCCACGCCCTGGACGACGCACTTGCACGTGCCTGCCTTCTTCTCTTCC
TCCCTTTCCGCTCATCCTCCCTCACTTCCTCCCCGGCACCTTTTCCTCCA
CCACCTCGATTGCTTGCCCAACCTTTACGGCCACGCGTCGTACCGAACGA
CAACCGCTGAGTTTCTCCTCGACCCGCTAGGGTATGTCGCGCAACGTTAT
GGAGAGAAAAGCAACAGCAACAGCAGCAGCAGCAGCAGCAAGAGCGGTAG
CAGCAACACCAGCAGCGGAAGGTTGGAAGGCACACCTTTCTCCCCCCTGC
CCTGTCTTCTTCCAGATTATATCGTTTCCTTCGGCTCAGCAGCTTGGAAA
ATGGAGCAACTTTTGGTGTCCATCGGCTTTCACGTTGAGGCAACTCTTTT
TCATTCTTCATTCAAAGGGGACGTGGACAGCCCAAGGTCTGAGGAAAATA
TCGTTATTTTCTCCTTTGATCGCGGGCGTGGGAGCGCGGGGCATCGTAAT
CTATCTTTTATTGAGGCCAAGGAGGAGCTGTAA
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Synonyms
Publications