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Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
chr8 | genome | chr8:355463..357995 + |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
BLAST of NO08G01130.1 vs.
Match: EWM26712.1 (phosphatidylinositol class b [Nannochloropsis gaditana]) HSP 1 Score: 247.3 bits (630), Expect = 1.500e-61 Identity = 140/242 (57.85%), Postives = 172/242 (71.07%), Query Frame = 0
Query: 146 GGGGEQGGRGEAVGKWALFFQCSNWFMWYAGVRTFSSSFEMALLVPAVYHWLSLVEWISRIKEQGNKEAEEGKGAVYLPAGRVSWEEPLALVLGALSIIVRPTALFAWLPLGLWRMFHTRFVDMPRYLVMVVLPWTGLVLAGAVLLDSHCYSLLSQSLGAATSSSASVSSPSSSLSNW-LVFTPLNFLRVNLVADVASQYGTHPFHWYFTLGGLSVLTTHLPFLLLGLRRA-----FFSSSP 382
G G + R E + + ALF QCSNWFMWYAGVRTFSSS EMALLVPAVYHW++LVE I E GN+++ YLP RV EPL++VLG +SI+VRPTALFAW+PLG WR+ TR D+P+YL+ VVL WT LV+ + LLDS+CY+ +S L A ++ +S++ W VFTP+NFLR+NLVA VA QYG+HPFHWYFTLG L+VLTT LPF+L GLRRA FF SP
Sbjct: 509 GDGDDAIARAETIARCALFCQCSNWFMWYAGVRTFSSSLEMALLVPAVYHWVALVERAESI-EGGNRKSPR-----YLPPSRVGMTEPLSIVLGTVSIMVRPTALFAWVPLGFWRLSCTRLYDIPQYLLRVVLFWTVLVMLVSTLLDSYCYNRVS-VLDQARNAGPGAHPTASTVPQWEWVFTPINFLRINLVAGVAVQYGSHPFHWYFTLGALTVLTTQLPFVLFGLRRALCRNRFFVWSP 743
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO08G01130.1 ID=NO08G01130.1|Name=NO08G01130.1|organism=Nannochloropsis oceanica|type=mRNA|length=2352bp ATGAACGCCTGGACTGTCCGGACTTATTTTAACCCTGACGAGTACTGGCA AGGCCCAGAGGTGGCTCACGTGCTTGTATTTGGCGCGGGTTACCTGACAT GGGAATGGCAAATAGCACACATTCGTTCCTTTCTACATCCGTTGCTCTTC ACGGTCTTCTATGCTCTGCTAAAAGCATCCGGGTTCGCCACCCGCGGTGC TGTCGCTTATGGGCCCTCGGTGGTCGTCCAAGCCCTGCTTACTGCAACGA CTGACATGTATGTCTACTGGTTGGGAAAACGCGTGGCGACACCATGCAGA GGAGGAGGAGGAAGAAGAGGAGGAGGAGCTAGAGTAGGAATTAGAGGAGA AGGAGGAGGAGGAGGCGGCGGCGGCGGCGGCGGAGGAGGAGGAGGAGGAG GAGGAGGAGGAGGAGGAGGAGGAGGAGGAAGAGGAGGAGGAGGAGGAGAG CAGGGAGGGAGGGGAGAGGCTGTAGGGAAGTGGGCCTTGTTCTTCCAGTG CAGTAATTGGTTCATGTGGTATGCAGGGGTGAGAACTTTCTCGTCTTCCT TTGAAATGGCCTTGCTTGTCCCTGCCGTGTACCACTGGTTGAGCCTCGTC GAGTGGATATCAAGGATCAAGGAACAGGGAAATAAAGAAGCAGAAGAGGG GAAGGGAGCAGTGTACCTTCCAGCTGGTCGTGTGTCGTGGGAAGAGCCCT TGGCGTTGGTGCTCGGTGCACTCTCTATCATTGTCCGACCCACCGCCCTG TTCGCATGGCTACCCCTGGGGCTATGGCGGATGTTTCACACACGCTTCGT TGACATGCCGCGGTATCTCGTTATGGTGGTGCTGCCATGGACGGGCTTGG TCTTGGCAGGGGCCGTGCTGTTAGACTCTCACTGCTACAGCCTCCTTTCT CAGTCCCTCGGCGCTGCCACCTCCTCCTCCGCCTCTGTTTCCTCCCCTTC CTCCTCTCTTAGTAACTGGTTGGTATTTACTCCATTGAATTTTCTTCGTG TCAACCTTGTTGCTGACGTGGCTTCCCAGTATGGAACGCACCCCTTCCAC TGGTATTTCACTCTAGGGGGACTCTCTGTTCTGACCACACACCTACCCTT CCTCCTCCTCGGCCTGCGTCGCGCTTTCTTCTCTTCCTCCCCTTCCTTTT TCTTGCCGTCATCCTCTTCAACACCGTCCTCCTCCTCTTTCTCTTCTACT TCTTCTTTATCTTCTTCCTCCTCCTCCTCCTCTCCCTCCTCCTCGTCGTC GTCGTCGTCGTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCAA CCTCTCTATGGCTGTTGGCGTTGGTGGTGCTAATCTATCCCTTAGGCCTC TCACTCTCCCCCCACAAGGAGTTCCGCTTCCTCCTTCCTATCCTTCCCCT AGCCTTCGTGCTGGCCGGGGCAGCATTCGTAATAGACACGCTACCCCCTC CACCCTTCCCACCCCTTACCTCCTCTTGTTCACTCTCCACTTTACCCAAC GTGAAAAGTCGAAGAAGAAAGACGGAACGGTGGTCTTTCTTTTCTCTCGT CCTCTTTCTCGTCCTCACGCATGCTCCCGTTGCCTTTTATTTTTCCCGAG TCCACCAACGGGGTCCAATTGATGTGATGAGCTTCTTGTCTGACCGACTC CAGGCAGATATGCGATTGGAGCAGCAACAGCAACAGCAGCAGCAGCAGCA GAGAGGGAAGGGGGGTAATGACGTGCGGATTGACTTTCTAATGCCTTGTC ATGCCACGCCCTGGACGACGCACTTGCACGTGCCTGCCTTCTTCTCTTCC TCCCTTTCCGCTCATCCTCCCTCACTTCCTCCCCGGCACCTTTTCCTCCA CCACCTCGATTGCTTGCCCAACCTTTACGGCCACGCGTCGTACCGAACGA CAACCGCTGAGTTTCTCCTCGACCCGCTAGGGTATGTCGCGCAACGTTAT GGAGAGAAAAGCAACAGCAACAGCAGCAGCAGCAGCAGCAAGAGCGGTAG CAGCAACACCAGCAGCGGAAGGTTGGAAGGCACACCTTTCTCCCCCCTGC CCTGTCTTCTTCCAGATTATATCGTTTCCTTCGGCTCAGCAGCTTGGAAA ATGGAGCAACTTTTGGTGTCCATCGGCTTTCACGTTGAGGCAACTCTTTT TCATTCTTCATTCAAAGGGGACGTGGACAGCCCAAGGTCTGAGGAAAATA TCGTTATTTTCTCCTTTGATCGCGGGCGTGGGAGCGCGGGGCATCGTAAT CTATCTTTTATTGAGGCCAAGGAGGAGCTGTAAAAAGTAGGGGGGAGGGG AGGGAGCAATACTAGGAATAGAATATCAATGCAAGGTAAAAATAGCAGCG AC back to topprotein sequence of NO08G01130.1 >NO08G01130.1-protein ID=NO08G01130.1-protein|Name=NO08G01130.1|organism=Nannochloropsis oceanica|type=polypeptide|length=761bp MNAWTVRTYFNPDEYWQGPEVAHVLVFGAGYLTWEWQIAHIRSFLHPLLF TVFYALLKASGFATRGAVAYGPSVVVQALLTATTDMYVYWLGKRVATPCR GGGGRRGGGARVGIRGEGGGGGGGGGGGGGGGGGGGGGGGGGGRGGGGGE QGGRGEAVGKWALFFQCSNWFMWYAGVRTFSSSFEMALLVPAVYHWLSLV EWISRIKEQGNKEAEEGKGAVYLPAGRVSWEEPLALVLGALSIIVRPTAL FAWLPLGLWRMFHTRFVDMPRYLVMVVLPWTGLVLAGAVLLDSHCYSLLS QSLGAATSSSASVSSPSSSLSNWLVFTPLNFLRVNLVADVASQYGTHPFH WYFTLGGLSVLTTHLPFLLLGLRRAFFSSSPSFFLPSSSSTPSSSSFSST SSLSSSSSSSSPSSSSSSSSSSSSSSSSSSSSSTSLWLLALVVLIYPLGL SLSPHKEFRFLLPILPLAFVLAGAAFVIDTLPPPPFPPLTSSCSLSTLPN VKSRRRKTERWSFFSLVLFLVLTHAPVAFYFSRVHQRGPIDVMSFLSDRL QADMRLEQQQQQQQQQQRGKGGNDVRIDFLMPCHATPWTTHLHVPAFFSS SLSAHPPSLPPRHLFLHHLDCLPNLYGHASYRTTTAEFLLDPLGYVAQRY GEKSNSNSSSSSSKSGSSNTSSGRLEGTPFSPLPCLLPDYIVSFGSAAWK MEQLLVSIGFHVEATLFHSSFKGDVDSPRSEENIVIFSFDRGRGSAGHRN LSFIEAKEEL* back to topmRNA from alignment at chr8:355463..357995+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO08G01130.1 ID=NO08G01130.1|Name=NO08G01130.1|organism=Nannochloropsis oceanica|type=mRNA|length=2533bp|location=Sequence derived from alignment at chr8:355463..357995+ (Nannochloropsis oceanica) ATGAACGCCTGGACTGTCCGGACTTATTTTAACCCTGACGAGTACTGGCA
AGGCCCAGAGGTGGCTCACGTGCTTGTATTTGGCGCGGGTTACCTGTAAG
TCTACGTATATTGTGCAATGACGCCTCTATGTAGCGTCTTCGAGATGTGG
GCAACTCTCTCACTCACCCTCGCTTGTTCCTGACAGAGTCCCGGTGCATT
TGACCACCCGCGAGCCCTCCCCCATTGACCTCTCACTTCATTTCCTCTTG
ACGCATATTCATAAATATACAAACAGGACATGGGAATGGCAAATAGCACA
CATTCGTTCCTTTCTACATCCGTTGCTCTTCACGGTCTTCTATGCTCTGC
TAAAAGCATCCGGGTTCGCCACCCGCGGTGCTGTCGCTTATGGGCCCTCG
GTGGTCGTCCAAGCCCTGCTTACTGCAACGACTGACATGTATGTCTACTG
GTTGGGAAAACGCGTGGCGACACCATGCAGAGGAGGAGGAGGAAGAAGAG
GAGGAGGAGCTAGAGTAGGAATTAGAGGAGAAGGAGGAGGAGGAGGCGGC
GGCGGCGGCGGCGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGG
AGGAGGAGGAAGAGGAGGAGGAGGAGGAGAGCAGGGAGGGAGGGGAGAGG
CTGTAGGGAAGTGGGCCTTGTTCTTCCAGTGCAGTAATTGGTTCATGTGG
TATGCAGGGGTGAGAACTTTCTCGTCTTCCTTTGAAATGGCCTTGCTTGT
CCCTGCCGTGTACCACTGGTTGAGCCTCGTCGAGTGGATATCAAGGATCA
AGGAACAGGGAAATAAAGAAGCAGAAGAGGGGAAGGGAGCAGTGTACCTT
CCAGCTGGTCGTGTGTCGTGGGAAGAGCCCTTGGCGTTGGTGCTCGGTGC
ACTCTCTATCATTGTCCGACCCACCGCCCTGTTCGCATGGCTACCCCTGG
GGCTATGGCGGATGTTTCACACACGCTTCGTTGACATGCCGCGGTATCTC
GTTATGGTGGTGCTGCCATGGACGGGCTTGGTCTTGGCAGGGGCCGTGCT
GTTAGACTCTCACTGCTACAGCCTCCTTTCTCAGTCCCTCGGCGCTGCCA
CCTCCTCCTCCGCCTCTGTTTCCTCCCCTTCCTCCTCTCTTAGTAACTGG
TTGGTATTTACTCCATTGAATTTTCTTCGTGTCAACCTTGTTGCTGACGT
GGCTTCCCAGTATGGAACGCACCCCTTCCACTGGTATTTCACTCTAGGGG
GACTCTCTGTTCTGACCACACACCTACCCTTCCTCCTCCTCGGCCTGCGT
CGCGCTTTCTTCTCTTCCTCCCCTTCCTTTTTCTTGCCGTCATCCTCTTC
AACACCGTCCTCCTCCTCTTTCTCTTCTACTTCTTCTTTATCTTCTTCCT
CCTCCTCCTCCTCTCCCTCCTCCTCGTCGTCGTCGTCGTCGTCCTCCTCC
TCCTCCTCCTCCTCCTCCTCCTCCTCCTCAACCTCTCTATGGCTGTTGGC
GTTGGTGGTGCTAATCTATCCCTTAGGCCTCTCACTCTCCCCCCACAAGG
AGTTCCGCTTCCTCCTTCCTATCCTTCCCCTAGCCTTCGTGCTGGCCGGG
GCAGCATTCGTAATAGACACGCTACCCCCTCCACCCTTCCCACCCCTTAC
CTCCTCTTGTTCACTCTCCACTTTACCCAACGTGAAAAGTCGAAGAAGAA
AGACGGAACGGTGGTCTTTCTTTTCTCTCGTCCTCTTTCTCGTCCTCACG
CATGCTCCCGTTGCCTTTTATTTTTCCCGAGTCCACCAACGGGGTCCAAT
TGATGTGATGAGCTTCTTGTCTGACCGACTCCAGGCAGATATGCGATTGG
AGCAGCAACAGCAACAGCAGCAGCAGCAGCAGAGAGGGAAGGGGGGTAAT
GACGTGCGGATTGACTTTCTAATGCCTTGTCATGCCACGCCCTGGACGAC
GCACTTGCACGTGCCTGCCTTCTTCTCTTCCTCCCTTTCCGCTCATCCTC
CCTCACTTCCTCCCCGGCACCTTTTCCTCCACCACCTCGATTGCTTGCCC
AACCTTTACGGCCACGCGTCGTACCGAACGACAACCGCTGAGTTTCTCCT
CGACCCGCTAGGGTATGTCGCGCAACGTTATGGAGAGAAAAGCAACAGCA
ACAGCAGCAGCAGCAGCAGCAAGAGCGGTAGCAGCAACACCAGCAGCGGA
AGGTTGGAAGGCACACCTTTCTCCCCCCTGCCCTGTCTTCTTCCAGATTA
TATCGTTTCCTTCGGCTCAGCAGCTTGGAAAATGGAGCAACTTTTGGTGT
CCATCGGCTTTCACGTTGAGGCAACTCTTTTTCATTCTTCATTCAAAGGG
GACGTGGACAGCCCAAGGTCTGAGGAAAATATCGTTATTTTCTCCTTTGA
TCGCGGGCGTGGGAGCGCGGGGCATCGTAATCTATCTTTTATTGAGGCCA
AGGAGGAGCTGTAAAAAGTAGGGGGGAGGGGAGGGAGCAATACTAGGAAT
AGAATATCAATGCAAGGTAAAAATAGCAGCGAC back to topCoding sequence (CDS) from alignment at chr8:355463..357995+ >NO08G01130.1 ID=NO08G01130.1|Name=NO08G01130.1|organism=Nannochloropsis oceanica|type=CDS|length=2283bp|location=Sequence derived from alignment at chr8:355463..357995+ (Nannochloropsis oceanica) ATGAACGCCTGGACTGTCCGGACTTATTTTAACCCTGACGAGTACTGGCA AGGCCCAGAGGTGGCTCACGTGCTTGTATTTGGCGCGGGTTACCTGACAT GGGAATGGCAAATAGCACACATTCGTTCCTTTCTACATCCGTTGCTCTTC ACGGTCTTCTATGCTCTGCTAAAAGCATCCGGGTTCGCCACCCGCGGTGC TGTCGCTTATGGGCCCTCGGTGGTCGTCCAAGCCCTGCTTACTGCAACGA CTGACATGTATGTCTACTGGTTGGGAAAACGCGTGGCGACACCATGCAGA GGAGGAGGAGGAAGAAGAGGAGGAGGAGCTAGAGTAGGAATTAGAGGAGA AGGAGGAGGAGGAGGCGGCGGCGGCGGCGGCGGAGGAGGAGGAGGAGGAG GAGGAGGAGGAGGAGGAGGAGGAGGAGGAAGAGGAGGAGGAGGAGGAGAG CAGGGAGGGAGGGGAGAGGCTGTAGGGAAGTGGGCCTTGTTCTTCCAGTG CAGTAATTGGTTCATGTGGTATGCAGGGGTGAGAACTTTCTCGTCTTCCT TTGAAATGGCCTTGCTTGTCCCTGCCGTGTACCACTGGTTGAGCCTCGTC GAGTGGATATCAAGGATCAAGGAACAGGGAAATAAAGAAGCAGAAGAGGG GAAGGGAGCAGTGTACCTTCCAGCTGGTCGTGTGTCGTGGGAAGAGCCCT TGGCGTTGGTGCTCGGTGCACTCTCTATCATTGTCCGACCCACCGCCCTG TTCGCATGGCTACCCCTGGGGCTATGGCGGATGTTTCACACACGCTTCGT TGACATGCCGCGGTATCTCGTTATGGTGGTGCTGCCATGGACGGGCTTGG TCTTGGCAGGGGCCGTGCTGTTAGACTCTCACTGCTACAGCCTCCTTTCT CAGTCCCTCGGCGCTGCCACCTCCTCCTCCGCCTCTGTTTCCTCCCCTTC CTCCTCTCTTAGTAACTGGTTGGTATTTACTCCATTGAATTTTCTTCGTG TCAACCTTGTTGCTGACGTGGCTTCCCAGTATGGAACGCACCCCTTCCAC TGGTATTTCACTCTAGGGGGACTCTCTGTTCTGACCACACACCTACCCTT CCTCCTCCTCGGCCTGCGTCGCGCTTTCTTCTCTTCCTCCCCTTCCTTTT TCTTGCCGTCATCCTCTTCAACACCGTCCTCCTCCTCTTTCTCTTCTACT TCTTCTTTATCTTCTTCCTCCTCCTCCTCCTCTCCCTCCTCCTCGTCGTC GTCGTCGTCGTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCAA CCTCTCTATGGCTGTTGGCGTTGGTGGTGCTAATCTATCCCTTAGGCCTC TCACTCTCCCCCCACAAGGAGTTCCGCTTCCTCCTTCCTATCCTTCCCCT AGCCTTCGTGCTGGCCGGGGCAGCATTCGTAATAGACACGCTACCCCCTC CACCCTTCCCACCCCTTACCTCCTCTTGTTCACTCTCCACTTTACCCAAC GTGAAAAGTCGAAGAAGAAAGACGGAACGGTGGTCTTTCTTTTCTCTCGT CCTCTTTCTCGTCCTCACGCATGCTCCCGTTGCCTTTTATTTTTCCCGAG TCCACCAACGGGGTCCAATTGATGTGATGAGCTTCTTGTCTGACCGACTC CAGGCAGATATGCGATTGGAGCAGCAACAGCAACAGCAGCAGCAGCAGCA GAGAGGGAAGGGGGGTAATGACGTGCGGATTGACTTTCTAATGCCTTGTC ATGCCACGCCCTGGACGACGCACTTGCACGTGCCTGCCTTCTTCTCTTCC TCCCTTTCCGCTCATCCTCCCTCACTTCCTCCCCGGCACCTTTTCCTCCA CCACCTCGATTGCTTGCCCAACCTTTACGGCCACGCGTCGTACCGAACGA CAACCGCTGAGTTTCTCCTCGACCCGCTAGGGTATGTCGCGCAACGTTAT GGAGAGAAAAGCAACAGCAACAGCAGCAGCAGCAGCAGCAAGAGCGGTAG CAGCAACACCAGCAGCGGAAGGTTGGAAGGCACACCTTTCTCCCCCCTGC CCTGTCTTCTTCCAGATTATATCGTTTCCTTCGGCTCAGCAGCTTGGAAA ATGGAGCAACTTTTGGTGTCCATCGGCTTTCACGTTGAGGCAACTCTTTT TCATTCTTCATTCAAAGGGGACGTGGACAGCCCAAGGTCTGAGGAAAATA TCGTTATTTTCTCCTTTGATCGCGGGCGTGGGAGCGCGGGGCATCGTAAT CTATCTTTTATTGAGGCCAAGGAGGAGCTGTAA back to top
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