NO08G00650.1, NO08G00650.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO08G00650.1
Unique NameNO08G00650.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1458
Alignment locationchr8:226625..228747 -

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Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr8genomechr8:226625..228747 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
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BLAST of NO08G00650.1 vs.
Match: EWM26558.1 (sulfate transporter family protein [Nannochloropsis gaditana])

HSP 1 Score: 378.3 bits (970), Expect = 3.700e-101
Identity = 221/321 (68.85%), Postives = 241/321 (75.08%), Query Frame = 0 
Query:  107 STSALYFKTGGGYRPCLFLIAALMAAFLLLGQEAITYFPRPLAGCLLLHLGAVLLYESLVLTWQKAVDMSEYVTIWTITLSMTIIGFMEGVGIGLLLACGIFVVQCSRNNPIGSAFPGDGLSSKEMRSPAQRKLLAYRLQGSIYIIRLRGNLFFGNIEQLFLHLREVFHRMPHLLFLVLDMGELAGIDFSARDRLVRMCKTMTGQ-----GKEGGRRVHMVWAALHKPLKEKLKAGGCFGEE--------------------RGGGGGRGK--------------CFEEEEEKA-----AAVAAAAAAAEEEEEEEEEEEE 384
            STSALY+KTGGG R   FLI  LMA+FLL+G +AI YFPRPLAG LLLHLGAVLLYES+V TWQK+VD SEYVTIWTITLSMT+IGFMEGVGIGLLLACGIFVVQCS NNPIGSAF GDGLSSKEMRSPAQRKLL YRLQGSIYIIRLRGNLFFGNIEQLFLHLREV H MPHLLFLVLD GELAGIDFSARDRL +MC++MTG+     GK GGR+VH+VWA LHK +KEKL+AG CFGEE                    RGGG GRG+               F  +  KA       + AA  A +EEEEE EEE +
Sbjct:   65 STSALYYKTGGGGRFSSFLITVLMASFLLMGPKAINYFPRPLAGSLLLHLGAVLLYESVVSTWQKSVDWSEYVTIWTITLSMTLIGFMEGVGIGLLLACGIFVVQCSGNNPIGSAFSGDGLSSKEMRSPAQRKLLEYRLQGSIYIIRLRGNLFFGNIEQLFLHLREVLHCMPHLLFLVLDTGELAGIDFSARDRLAKMCRSMTGEGGREGGKRGGRKVHLVWAGLHKSVKEKLRAGKCFGEEDGTGKGGKIQAALAVKGPGRRGGGSGRGEGWGWASLARGKQMHHFARDLNKAFTFCEDTILAAVGALDEEEEESEEERK 385
The following BLAST results are available for this feature:
BLAST of NO08G00650.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1
Match NameE-valueIdentityDescription
EWM26558.13.700e-10168.85sulfate transporter family protein [Nannochloropsi... [more]
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO08G00650NO08G00650Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO08G00650.1NO08G00650.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO08G00650.1.cds1NO08G00650.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO08G00650.1.cds2NO08G00650.1.cds2Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO08G00650.1.cds3NO08G00650.1.cds3Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO08G00650.1.cds4NO08G00650.1.cds4Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO08G00650.1.cds5NO08G00650.1.cds5Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO08G00650.1 ID=NO08G00650.1|Name=NO08G00650.1|organism=Nannochloropsis oceanica|type=mRNA|length=1458bp
ATGGGAGGAGGGGCCGAAGCGACGGCGGGCGTGGGGAGGATGTCCATGTC
GTCGTTGGGAGTAATTGATGAATGCCGGAGCTTCCCGGGGGTACTGGCGT
GCTTGGACGTGCGGTTAATCGCCTGGGATGTTGTGCCATCGCAGCTGTTC
ACGTTTTTGGGGCTGGTGTTTTTTAGTCTTATCCACATCCCAGTCAATGT
GCCCGCGCTTGCGGCCACTACAGGCACAGACGTGGATTTGAACAAGGAGC
TCAAGGCCCACGGGGTGTCCAATCTGTTGTGTGGCCTCTTCGGGGGCCTG
CAGACGTACATGGCCTACTCCACCAGCGCTCTGTACTTCAAAACCGGCGG
TGGGTATCGCCCATGCCTCTTCCTCATCGCGGCACTGATGGCCGCCTTCC
TCCTTCTGGGGCAAGAGGCAATCACCTATTTCCCTCGACCTCTCGCGGGA
TGCCTCCTCCTCCACCTCGGAGCGGTGCTGCTGTATGAGAGTCTGGTATT
GACGTGGCAGAAGGCGGTGGACATGAGTGAATACGTCACAATCTGGACCA
TCACGCTGAGTATGACTATCATCGGCTTCATGGAAGGTGTGGGCATTGGC
CTCCTCCTCGCGTGTGGAATCTTCGTCGTACAGTGTTCGCGCAATAATCC
CATCGGGAGTGCCTTCCCAGGAGACGGGCTCTCCAGCAAGGAAATGCGGT
CGCCAGCTCAGAGGAAGCTCCTCGCTTACCGTTTGCAGGGCTCCATTTAC
ATCATTCGACTGCGAGGTAATCTCTTCTTCGGCAACATCGAACAGCTCTT
CCTCCACCTTCGCGAGGTCTTCCACCGCATGCCGCACCTCCTCTTCCTCG
TCCTCGACATGGGCGAGCTAGCCGGCATAGATTTCTCGGCACGGGATCGC
TTAGTGCGGATGTGCAAGACGATGACGGGGCAAGGGAAGGAGGGGGGGAG
GAGGGTTCACATGGTGTGGGCGGCGTTACACAAACCTCTGAAGGAGAAGT
TGAAAGCTGGAGGGTGTTTTGGGGAGGAGAGAGGTGGGGGGGGGGGACGG
GGAAAATGCTTCGAGGAGGAGGAGGAGAAGGCGGCGGCGGTGGCGGCGGC
GGCGGCGGCAGCGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGG
AGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAG
GAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGA
GGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGG
AGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAG
GAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGA
GGAGGAGAAAGAGGAAGAGGAAGAGGAAGAGGAAGTAGGGAGGGGGCTGT
CCGTGTAG
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protein sequence of NO08G00650.1

>NO08G00650.1-protein ID=NO08G00650.1-protein|Name=NO08G00650.1|organism=Nannochloropsis oceanica|type=polypeptide|length=486bp
MGGGAEATAGVGRMSMSSLGVIDECRSFPGVLACLDVRLIAWDVVPSQLF
TFLGLVFFSLIHIPVNVPALAATTGTDVDLNKELKAHGVSNLLCGLFGGL
QTYMAYSTSALYFKTGGGYRPCLFLIAALMAAFLLLGQEAITYFPRPLAG
CLLLHLGAVLLYESLVLTWQKAVDMSEYVTIWTITLSMTIIGFMEGVGIG
LLLACGIFVVQCSRNNPIGSAFPGDGLSSKEMRSPAQRKLLAYRLQGSIY
IIRLRGNLFFGNIEQLFLHLREVFHRMPHLLFLVLDMGELAGIDFSARDR
LVRMCKTMTGQGKEGGRRVHMVWAALHKPLKEKLKAGGCFGEERGGGGGR
GKCFEEEEEKAAAVAAAAAAAEEEEEEEEEEEEEEEEEEEEEEEEEEEEE
EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE
EEEEEEEEEEEEEEEEEEEKEEEEEEEEVGRGLSV*
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mRNA from alignment at chr8:226625..228747-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO08G00650.1 ID=NO08G00650.1|Name=NO08G00650.1|organism=Nannochloropsis oceanica|type=mRNA|length=2123bp|location=Sequence derived from alignment at chr8:226625..228747- (Nannochloropsis oceanica)
ATGGGAGGAGGGGCCGAAGCGACGGCGGGCGTGGGGAGGATGTCCATGTC
GTCGTTGGGAGTAATTGATGAATGCCGGAGCTTCCCGGGGGTACTGGCGT
GCTTGGACGTGCGGTTAATCGCCTGGGATGTTGTGCCATCGCAGCTGTTC
ACGTTTTTGGGGCTGGTGTTTTTTAGGTGGGGAGGGAAGGAGGGAGGGAG
GGAGGGGGAGAGAGAGGGATTAGTCGCTTCAGGTACCCACATCGGTCTCC
TCCCTCCCTTCCTCTCATCCTCCCTCCGTCCCTCCCTGCTCTAGTCTTAT
CCACATCCCAGTCAATGTGCCCGCGCTTGCGGCCACTACAGGCACAGACG
TGGATTTGAACAAGGAGCTCAAGGCCCACGGGGTGTCCAATCTGTTGTGT
GGCCTCTTCGGGGGCCTGCAGACGTACATGGCCTACTCGTGCGTTTATGG
GGGGAGGAGGGAGGGGAGGAGGAACAGAGGGACGGACGGGTGGAGCGAGA
CTCAATATAAGGCAACCTGAGATTCCTGCCTTGTGCGTGTCTTCAGTCCC
ACCGATCATTCCTCCTTCTCTCCCTCCCTCCCTCCCTTCTCTCACCTACA
GCACCAGCGCTCTGTACTTCAAAACCGGCGGTGGGTATCGCCCATGCCTC
TTCCTCATCGCGGCACTGATGGCCGCCTTCCTCCTTCTGGGGCAAGAGGC
AATCACCTATTTCCCTCGACCTCTCGCGGGATGCCTCCTCCTCCACCTCG
GAGCGGTGCTGCTGTATGAGAGTCTGGTATTGACGTGGCAGAAGGCGGTG
GACATGAGTGAATACGTCACAATCTGGACCATCACGCTGAGTATGACTAT
CATCGGCTTCATGGAAGGTAAAATAAGCACGTGATTTCCCTCTTTCTCTC
CCCCCCTCACTCCCTCCCTCACTTCCCCCCCTCTTTTCTTTTCTATATTT
GCGTGTGTGTGTTAAGTCCTTGGCCGTCTTTCCTTCCTCCCTATCTCCTC
TTTTATACAAGCTCCTGTAGATCGCTTCCTCATTTCTCAAGCGAAACCCC
TCCACGCCCCCACCCCCCCACCCCTCCCTCCCTCCCTCCCTCCCTCCCTC
CCTCCCAGGTGTGGGCATTGGCCTCCTCCTCGCGTGTGGAATCTTCGTCG
TACAGTGTTCGCGCAATAATCCCATCGGGAGTGCCTTCCCAGGAGACGGG
CTCTCCAGCAAGGAAATGCGGTCGCCAGCTCAGAGGAAGCTCCTCGCTTA
CCGTTTGCAGGGCTCCATTTACATCATTCGACTGCGAGGTACCGACGGAA
GGAGGGAGGGAAGGAGGGAAGGAGAGCTGCTAGGGGATGATGATCTAGGA
CAAAGCACCGCACAAAAGGCAGCGTCCGACCGTTTCTTCCTTCCCTCCCA
CCCTTCCTCCCTCTCTTCGTTGCCCCCTCAGGTAATCTCTTCTTCGGCAA
CATCGAACAGCTCTTCCTCCACCTTCGCGAGGTCTTCCACCGCATGCCGC
ACCTCCTCTTCCTCGTCCTCGACATGGGCGAGCTAGCCGGCATAGATTTC
TCGGCACGGGATCGCTTAGTGCGGATGTGCAAGACGATGACGGGGCAAGG
GAAGGAGGGGGGGAGGAGGGTTCACATGGTGTGGGCGGCGTTACACAAAC
CTCTGAAGGAGAAGTTGAAAGCTGGAGGGTGTTTTGGGGAGGAGAGAGGT
GGGGGGGGGGGACGGGGAAAATGCTTCGAGGAGGAGGAGGAGAAGGCGGC
GGCGGTGGCGGCGGCGGCGGCGGCAGCGGAGGAGGAGGAGGAGGAGGAGG
AGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAG
GAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGA
GGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGG
AGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAG
GAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGA
GGAGGAGGAGGAGGAGGAGGAGAAAGAGGAAGAGGAAGAGGAAGAGGAAG
TAGGGAGGGGGCTGTCCGTGTAG
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Coding sequence (CDS) from alignment at chr8:226625..228747-

>NO08G00650.1 ID=NO08G00650.1|Name=NO08G00650.1|organism=Nannochloropsis oceanica|type=CDS|length=1458bp|location=Sequence derived from alignment at chr8:226625..228747- (Nannochloropsis oceanica)
ATGGGAGGAGGGGCCGAAGCGACGGCGGGCGTGGGGAGGATGTCCATGTC
GTCGTTGGGAGTAATTGATGAATGCCGGAGCTTCCCGGGGGTACTGGCGT
GCTTGGACGTGCGGTTAATCGCCTGGGATGTTGTGCCATCGCAGCTGTTC
ACGTTTTTGGGGCTGGTGTTTTTTAGTCTTATCCACATCCCAGTCAATGT
GCCCGCGCTTGCGGCCACTACAGGCACAGACGTGGATTTGAACAAGGAGC
TCAAGGCCCACGGGGTGTCCAATCTGTTGTGTGGCCTCTTCGGGGGCCTG
CAGACGTACATGGCCTACTCCACCAGCGCTCTGTACTTCAAAACCGGCGG
TGGGTATCGCCCATGCCTCTTCCTCATCGCGGCACTGATGGCCGCCTTCC
TCCTTCTGGGGCAAGAGGCAATCACCTATTTCCCTCGACCTCTCGCGGGA
TGCCTCCTCCTCCACCTCGGAGCGGTGCTGCTGTATGAGAGTCTGGTATT
GACGTGGCAGAAGGCGGTGGACATGAGTGAATACGTCACAATCTGGACCA
TCACGCTGAGTATGACTATCATCGGCTTCATGGAAGGTGTGGGCATTGGC
CTCCTCCTCGCGTGTGGAATCTTCGTCGTACAGTGTTCGCGCAATAATCC
CATCGGGAGTGCCTTCCCAGGAGACGGGCTCTCCAGCAAGGAAATGCGGT
CGCCAGCTCAGAGGAAGCTCCTCGCTTACCGTTTGCAGGGCTCCATTTAC
ATCATTCGACTGCGAGGTAATCTCTTCTTCGGCAACATCGAACAGCTCTT
CCTCCACCTTCGCGAGGTCTTCCACCGCATGCCGCACCTCCTCTTCCTCG
TCCTCGACATGGGCGAGCTAGCCGGCATAGATTTCTCGGCACGGGATCGC
TTAGTGCGGATGTGCAAGACGATGACGGGGCAAGGGAAGGAGGGGGGGAG
GAGGGTTCACATGGTGTGGGCGGCGTTACACAAACCTCTGAAGGAGAAGT
TGAAAGCTGGAGGGTGTTTTGGGGAGGAGAGAGGTGGGGGGGGGGGACGG
GGAAAATGCTTCGAGGAGGAGGAGGAGAAGGCGGCGGCGGTGGCGGCGGC
GGCGGCGGCAGCGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGG
AGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAG
GAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGA
GGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGG
AGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAG
GAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGA
GGAGGAGAAAGAGGAAGAGGAAGAGGAAGAGGAAGTAGGGAGGGGGCTGT
CCGTGTAG
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Synonyms
Publications