NO08G00630.1, NO08G00630.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO08G00630.1
Unique NameNO08G00630.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1059
Alignment locationchr8:223934..224992 +

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Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr8genomechr8:223934..224992 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
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BLAST of NO08G00630.1 vs.
Match: EWM26560.1 (methionine aminopeptidase [Nannochloropsis gaditana])

HSP 1 Score: 537.0 bits (1382), Expect = 4.500e-149
Identity = 256/310 (82.58%), Postives = 282/310 (90.97%), Query Frame = 0 
Query:   44 RSLFGFG-ESMSKEAAGRRRAAVPHRPPMAPGHVTPRRTLPANSPVIKPNYADTGKLPAPFPSILLHTPESIAKMRAAGRLARRMLDYACSLVRPGITTEEIDVQVHNAILAAGAYPSPLNYWGFPKSICSSINEVVIHGIPDDRPLREGDIAKFDISLFYDGVHGDNCASVPVGEVDEEGLRLMEAAQKALDSGVEACSPGACLSGVGAAVHAVADEYGYETVRAYSGHGVGTDLHMRPFVLHYRNKEKLPLRPGMVFTIEPMLLEKGPEIDTWEDGWTVVSRDGGRGAQYEHTVLITEEGVEVLTVPE 353
            R+ F FG E  + E  GRR A+VP RPPMAPGHV+PRR LPANSPV+KPNYADTGKLP P PSILLHTPESI KMRAAGRLAR+MLDY CSLVRPGITTEEID +VH+AILA+GAYPSPLNYWGFPKSICSSINEVVIHGIPDDRPL+EGDIAKFDISL++ GVHGDNCASV VGEVD EGLRLM AA++AL +G++AC PGACLSG+G+AVHAVAD+Y YETVRAYSGHGVG DLHMRPFVLHYRN E+LPLRPGM+FTIEPMLLE GPEI TW DGWTVVS+DGGRGAQ+EHTVLITE+GVEVLT+PE
Sbjct:   35 RNFFSFGKEERANERGGRRGASVPPRPPMAPGHVSPRRALPANSPVVKPNYADTGKLPPPSPSILLHTPESIEKMRAAGRLARKMLDYTCSLVRPGITTEEIDRRVHDAILASGAYPSPLNYWGFPKSICSSINEVVIHGIPDDRPLQEGDIAKFDISLYFQGVHGDNCASVGVGEVDAEGLRLMTAAKEALQAGIDACGPGACLSGIGSAVHAVADKYEYETVRAYSGHGVGPDLHMRPFVLHYRNGERLPLRPGMIFTIEPMLLEHGPEITTWADGWTVVSKDGGRGAQFEHTVLITEDGVEVLTLPE 344
The following BLAST results are available for this feature:
BLAST of NO08G00630.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1
Match NameE-valueIdentityDescription
EWM26560.14.500e-14982.58methionine aminopeptidase [Nannochloropsis gaditan... [more]
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO08G00630NO08G00630Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO08G00630.1NO08G00630.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO08G00630.1.cds1NO08G00630.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO08G00630.1 ID=NO08G00630.1|Name=NO08G00630.1|organism=Nannochloropsis oceanica|type=mRNA|length=1059bp
ATGGTACGACAGCCAGCCCCACGCCCAATGCACGCCGTGGCCGCCGCCAC
AAGTCGACGCTTACTCAGCCTTAAACCACAACCATCATCAATACCACATG
TCCTTGCGTCTGCCACCCTCATCCAGGCCCGGAGTCTTTTTGGCTTTGGC
GAAAGCATGTCAAAGGAAGCTGCGGGGCGGCGTCGCGCTGCTGTCCCTCA
CCGCCCACCTATGGCACCCGGACACGTCACACCGCGCCGCACCTTGCCGG
CAAACAGTCCTGTTATAAAACCCAATTATGCCGACACGGGCAAGCTCCCT
GCTCCTTTCCCTTCTATACTCTTGCACACCCCAGAAAGCATTGCCAAAAT
GCGAGCTGCCGGCCGCCTGGCCAGGCGGATGCTAGACTACGCATGCTCAC
TCGTAAGGCCCGGGATTACGACGGAAGAAATCGATGTGCAAGTACACAAC
GCAATACTTGCTGCGGGTGCGTATCCCTCCCCATTGAACTACTGGGGCTT
CCCCAAATCAATATGTTCGTCGATTAATGAGGTGGTGATTCACGGCATTC
CGGACGACAGACCATTGAGAGAGGGGGACATAGCAAAGTTTGACATATCC
TTGTTTTATGACGGTGTGCATGGGGATAACTGTGCCTCAGTCCCTGTGGG
GGAGGTTGATGAGGAGGGGTTACGGCTTATGGAGGCAGCGCAGAAAGCAT
TGGATAGTGGGGTGGAGGCTTGTAGCCCCGGGGCGTGTTTAAGTGGGGTG
GGCGCTGCAGTGCATGCGGTGGCGGATGAGTATGGATATGAGACTGTCCG
TGCATACAGTGGGCATGGGGTGGGGACAGATTTGCATATGCGTCCATTCG
TGTTGCACTATCGTAACAAGGAAAAGTTGCCATTGAGGCCTGGGATGGTG
TTTACGATCGAGCCAATGTTGTTGGAGAAAGGCCCGGAGATTGATACATG
GGAGGATGGATGGACGGTGGTGAGTAGAGATGGGGGTAGGGGGGCGCAGT
ACGAGCATACGGTGTTGATTACGGAGGAGGGGGTGGAGGTGCTGACTGTG
CCTGAGTAG
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protein sequence of NO08G00630.1

>NO08G00630.1-protein ID=NO08G00630.1-protein|Name=NO08G00630.1|organism=Nannochloropsis oceanica|type=polypeptide|length=353bp
MVRQPAPRPMHAVAAATSRRLLSLKPQPSSIPHVLASATLIQARSLFGFG
ESMSKEAAGRRRAAVPHRPPMAPGHVTPRRTLPANSPVIKPNYADTGKLP
APFPSILLHTPESIAKMRAAGRLARRMLDYACSLVRPGITTEEIDVQVHN
AILAAGAYPSPLNYWGFPKSICSSINEVVIHGIPDDRPLREGDIAKFDIS
LFYDGVHGDNCASVPVGEVDEEGLRLMEAAQKALDSGVEACSPGACLSGV
GAAVHAVADEYGYETVRAYSGHGVGTDLHMRPFVLHYRNKEKLPLRPGMV
FTIEPMLLEKGPEIDTWEDGWTVVSRDGGRGAQYEHTVLITEEGVEVLTV
PE*
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mRNA from alignment at chr8:223934..224992+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO08G00630.1 ID=NO08G00630.1|Name=NO08G00630.1|organism=Nannochloropsis oceanica|type=mRNA|length=1059bp|location=Sequence derived from alignment at chr8:223934..224992+ (Nannochloropsis oceanica)
ATGGTACGACAGCCAGCCCCACGCCCAATGCACGCCGTGGCCGCCGCCAC
AAGTCGACGCTTACTCAGCCTTAAACCACAACCATCATCAATACCACATG
TCCTTGCGTCTGCCACCCTCATCCAGGCCCGGAGTCTTTTTGGCTTTGGC
GAAAGCATGTCAAAGGAAGCTGCGGGGCGGCGTCGCGCTGCTGTCCCTCA
CCGCCCACCTATGGCACCCGGACACGTCACACCGCGCCGCACCTTGCCGG
CAAACAGTCCTGTTATAAAACCCAATTATGCCGACACGGGCAAGCTCCCT
GCTCCTTTCCCTTCTATACTCTTGCACACCCCAGAAAGCATTGCCAAAAT
GCGAGCTGCCGGCCGCCTGGCCAGGCGGATGCTAGACTACGCATGCTCAC
TCGTAAGGCCCGGGATTACGACGGAAGAAATCGATGTGCAAGTACACAAC
GCAATACTTGCTGCGGGTGCGTATCCCTCCCCATTGAACTACTGGGGCTT
CCCCAAATCAATATGTTCGTCGATTAATGAGGTGGTGATTCACGGCATTC
CGGACGACAGACCATTGAGAGAGGGGGACATAGCAAAGTTTGACATATCC
TTGTTTTATGACGGTGTGCATGGGGATAACTGTGCCTCAGTCCCTGTGGG
GGAGGTTGATGAGGAGGGGTTACGGCTTATGGAGGCAGCGCAGAAAGCAT
TGGATAGTGGGGTGGAGGCTTGTAGCCCCGGGGCGTGTTTAAGTGGGGTG
GGCGCTGCAGTGCATGCGGTGGCGGATGAGTATGGATATGAGACTGTCCG
TGCATACAGTGGGCATGGGGTGGGGACAGATTTGCATATGCGTCCATTCG
TGTTGCACTATCGTAACAAGGAAAAGTTGCCATTGAGGCCTGGGATGGTG
TTTACGATCGAGCCAATGTTGTTGGAGAAAGGCCCGGAGATTGATACATG
GGAGGATGGATGGACGGTGGTGAGTAGAGATGGGGGTAGGGGGGCGCAGT
ACGAGCATACGGTGTTGATTACGGAGGAGGGGGTGGAGGTGCTGACTGTG
CCTGAGTAG
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Coding sequence (CDS) from alignment at chr8:223934..224992+

>NO08G00630.1 ID=NO08G00630.1|Name=NO08G00630.1|organism=Nannochloropsis oceanica|type=CDS|length=1059bp|location=Sequence derived from alignment at chr8:223934..224992+ (Nannochloropsis oceanica)
ATGGTACGACAGCCAGCCCCACGCCCAATGCACGCCGTGGCCGCCGCCAC
AAGTCGACGCTTACTCAGCCTTAAACCACAACCATCATCAATACCACATG
TCCTTGCGTCTGCCACCCTCATCCAGGCCCGGAGTCTTTTTGGCTTTGGC
GAAAGCATGTCAAAGGAAGCTGCGGGGCGGCGTCGCGCTGCTGTCCCTCA
CCGCCCACCTATGGCACCCGGACACGTCACACCGCGCCGCACCTTGCCGG
CAAACAGTCCTGTTATAAAACCCAATTATGCCGACACGGGCAAGCTCCCT
GCTCCTTTCCCTTCTATACTCTTGCACACCCCAGAAAGCATTGCCAAAAT
GCGAGCTGCCGGCCGCCTGGCCAGGCGGATGCTAGACTACGCATGCTCAC
TCGTAAGGCCCGGGATTACGACGGAAGAAATCGATGTGCAAGTACACAAC
GCAATACTTGCTGCGGGTGCGTATCCCTCCCCATTGAACTACTGGGGCTT
CCCCAAATCAATATGTTCGTCGATTAATGAGGTGGTGATTCACGGCATTC
CGGACGACAGACCATTGAGAGAGGGGGACATAGCAAAGTTTGACATATCC
TTGTTTTATGACGGTGTGCATGGGGATAACTGTGCCTCAGTCCCTGTGGG
GGAGGTTGATGAGGAGGGGTTACGGCTTATGGAGGCAGCGCAGAAAGCAT
TGGATAGTGGGGTGGAGGCTTGTAGCCCCGGGGCGTGTTTAAGTGGGGTG
GGCGCTGCAGTGCATGCGGTGGCGGATGAGTATGGATATGAGACTGTCCG
TGCATACAGTGGGCATGGGGTGGGGACAGATTTGCATATGCGTCCATTCG
TGTTGCACTATCGTAACAAGGAAAAGTTGCCATTGAGGCCTGGGATGGTG
TTTACGATCGAGCCAATGTTGTTGGAGAAAGGCCCGGAGATTGATACATG
GGAGGATGGATGGACGGTGGTGAGTAGAGATGGGGGTAGGGGGGCGCAGT
ACGAGCATACGGTGTTGATTACGGAGGAGGGGGTGGAGGTGCTGACTGTG
CCTGAGTAG
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Synonyms
Publications