NO08G00360.1, NO08G00360.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO08G00360.1
Unique Name	NO08G00360.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	4542
Alignment location	chr8:141883..149095 -

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr8	genome	chr8:141883..149095 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO08G00360.1 vs.
Match: EWM26474.1 (manganese transport protein [Nannochloropsis gaditana])

HSP 1 Score: 778.5 bits (2009), Expect = 1.500e-221
Identity = 421/550 (76.55%), Postives = 464/550 (84.36%), Query Frame = 0

Query:   57 SSQRQACGTGSVWRSFGTKVKQFLFVQPPHPSSSASSSYSASSTAEERLPLRSHQGGN--NVRSLHVTPLPSSSSSSFCSSSSTHHPATRLLPSSQLPPSLLPSLPEAYHSVPVPRTRPGEATWLSRCRTLLAYVGPGYMVAVGYMDPGNWATDIAGGALYNYGLLSVVLCSSLLAIFLQVLTVKLGIATKRDLAQLCADVYSPRFSTFLWITAEIAIAACDLAEVIGSAMALQLLFGVPMVWGCGLTALDVLIVLSFFDKPGRRFRVLEMGVMGLIAIIFVCFALEIALSQPSFLGVMKGFLLPDLYPLVTEAPRLYIAMGILGATVMPHNLYLHSSLVQTRDYGESDDDKAEAIFYSSLDTIIALSLALFVNAAILIVSAAAFFDPSAVTQFAPSVSEAYDLLAPVLGNKAASILFGVALLASGQNSTLTGTLAGQIVMEGFVQVRLKPWLRRLLTRLTVVVPAVLTVALTGETGADFLLVLSQVILSLQLSFAVFPLIIFTGDISIMGPAFVNSPFTSACAWISAVLIAILNIWLLVMTAAQGGVPS 605
            S+   +  T +++ +F  K+  FL++ PP          +ASSTAEERLPLRS       N R+L VTP  SSS SS   + +T+ P TR       P  LLPSLPEAYHSVPVPR RPGE +WLSRCRTLLAYVGPGYMVAVGYMDPGNWATDIAGGA+Y+Y LLSVVL SSLLA+FLQVLTVKLG+ATKRDLAQ+CA+ YSPRF+ FLWITAEIAIAACDLAEVIGSA+ALQLLFG+P+VWGC LTALDVLIVLSFFDKPGRRFR LE+ VMGLIA+IFVCFA EI LS+PSF GVMKGF +PDLY L T+APRLYIAMGILGATVMPHNLYLHSSLVQTRDYGES +DK EAIFYSSLDTIIALSLALFVNAAILIV+AAAFFDPS  TQ APSVSEAYDLLAPVLGNKAASILFGVALLASGQNSTLTGTLAGQIVMEGFVQVRLKPWLRRL+TRL V+VPAV TV L G+ G DFLLVLSQVILS QLSFAVFPL++FT D+S+MG  FVNSP TS  AW+SA+LIA LNIWLLVMT  QG +P+
Sbjct:   42 SNSDSSSSTETIYHTFRGKIASFLYMAPP---------LAASSTAEERLPLRSTTSSQDRNKRTLQVTPQSSSSESSPILTYTTNAPPTRP------PTRLLPSLPEAYHSVPVPRARPGEVSWLSRCRTLLAYVGPGYMVAVGYMDPGNWATDIAGGAIYDYALLSVVLLSSLLAVFLQVLTVKLGVATKRDLAQMCAEAYSPRFAVFLWITAEIAIAACDLAEVIGSAIALQLLFGLPLVWGCCLTALDVLIVLSFFDKPGRRFRGLELAVMGLIAVIFVCFAAEIVLSRPSFSGVMKGFFVPDLYALATQAPRLYIAMGILGATVMPHNLYLHSSLVQTRDYGESVEDKTEAIFYSSLDTIIALSLALFVNAAILIVAAAAFFDPSGSTQDAPSVSEAYDLLAPVLGNKAASILFGVALLASGQNSTLTGTLAGQIVMEGFVQVRLKPWLRRLITRLVVIVPAVFTVVLAGDKGVDFLLVLSQVILSFQLSFAVFPLVMFTSDVSVMGTEFVNSPSTSFLAWVSAILIAALNIWLLVMTVGQGSIPA 576

The following BLAST results are available for this feature:

BLAST of NO08G00360.1 vs.

BLAST of NO08G00360.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
EWM26474.1	1.500e-221	76.55	manganese transport protein [Nannochloropsis gadit...	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO08G00360	NO08G00360	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO08G00360.1	NO08G00360.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO08G00360.1.cds1	NO08G00360.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO08G00360.1.cds2	NO08G00360.1.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO08G00360.1.cds3	NO08G00360.1.cds3	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO08G00360.1.cds4	NO08G00360.1.cds4	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO08G00360.1.cds5	NO08G00360.1.cds5	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO08G00360.1.cds6	NO08G00360.1.cds6	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO08G00360.1.cds7	NO08G00360.1.cds7	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO08G00360.1.cds8	NO08G00360.1.cds8	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO08G00360.1.cds9	NO08G00360.1.cds9	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO08G00360.1.cds10	NO08G00360.1.cds10	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO08G00360.1.cds11	NO08G00360.1.cds11	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr8:141883..149095-
coding sequence from alignment at chr8:141883..149095-

mRNA sequence

>NO08G00360.1 ID=NO08G00360.1|Name=NO08G00360.1|organism=Nannochloropsis oceanica|type=mRNA|length=4542bp
CACGCAAGCCGCAAGCCCATGTCCCCTCCTCACTTTGCTCCCTAGCAAAT
GCACCAATCCTTCCTGCGAGTCGTTCGATGGCAAGCAACATATTGGTCAA
GCCATGACTAATGCTGCCTTCGTTGGTCTACGAATAGCATTGCTGCCTTC
ATAACCGACTCCCAGGCTCGTACGACATGTCAACCCTCAATCTCCATCAT
GGCGAGCCCATCTTATTTTTACGTTGCAGTTCCTCGCCACCATCCCTTCA
CAGGCCTTCGCATCCCAAGTACTATTCCCCCACCGCCGACACATGCCCTC
TGCTTGCATTCCGGAAAACGGTAGCATGCTCTCTGACTCCCACACCAAGA
AAGACATGAAGACCAACGGTAGCAGCAGCAGCAGCAGCCATGGACACGGG
CCACTATCGACGACCTATCTCACCCTCAATGGGGGCCTACATCCACCACC
ACAACACCCAAGCTCTCAGAGACAAGCATGCGGGACAGGAAGTGTCTGGC
GCTCCTTTGGTACAAAGGTCAAGCAGTTCCTGTTCGTGCAACCCCCCCAC
CCCTCCTCCTCTGCTTCCTCCTCATACTCCGCATCCTCGACCGCCGAGGA
ACGCCTCCCCCTCCGCAGCCACCAAGGCGGGAACAATGTACGGAGTCTGC
ACGTTACGCCTCTACCATCATCATCCTCTTCCTCCTTCTGCTCTTCTTCC
TCCACCCATCACCCAGCCACCCGCCTGCTACCCTCGTCACAATTGCCTCC
CTCCCTCCTGCCCTCCCTCCCAGAGGCCTACCACTCCGTCCCTGTCCCTC
GCACGCGTCCTGGAGAGGCCACCTGGCTCTCTCGTTGCCGCACTCTCCTA
GCGTACGTGGGTCCTGGTTACATGGTCGCGGTGGGGTACATGGATCCCGG
GAATTGGGCTACAGACATTGCGGGTGGCGCCCTCTACAACTACGGTCTCC
TTTCCGTCGTCCTCTGCTCCTCTCTCCTCGCTATCTTCCTTCAAGTCCTG
ACCGTTAAACTCGGCATCGCCACCAAGCGGGACCTTGCGCAGCTCTGTGC
CGATGTCTACTCCCCGCGTTTCTCCACCTTCTTGTGGATCACTGCCGAAA
TCGCGATTGCGGCGTGTGATTTGGCAGAGGTTATAGGCTCGGCCATGGCT
CTGCAGCTCTTGTTTGGTGTACCGATGGTGTGGGGATGTGGCCTCACAGC
CCTAGATGTCCTGATCGTCCTCTCCTTCTTCGACAAGCCCGGACGTCGCT
TCCGGGTATTGGAAATGGGGGTGATGGGGCTTATTGCCATCATCTTCGTG
TGTTTCGCGCTTGAAATCGCCCTATCCCAGCCTTCCTTTCTAGGTGTGAT
GAAGGGTTTCCTTCTCCCGGACCTCTACCCGCTGGTCACAGAGGCCCCGC
GCTTGTACATCGCTATGGGCATTTTGGGTGCCACAGTCATGCCGCACAAT
CTGTACCTGCACTCCTCCCTCGTCCAAACCCGGGACTACGGCGAGAGCGA
CGACGACAAGGCCGAGGCCATCTTCTACTCCTCCCTGGACACCATCATCG
CCCTCTCTCTCGCCCTCTTCGTGAATGCCGCCATCCTCATTGTCTCAGCC
GCAGCCTTTTTCGATCCTTCTGCAGTCACTCAGTTCGCTCCGTCCGTTTC
CGAGGCATACGACTTGCTGGCGCCAGTCCTCGGCAACAAAGCGGCCTCAA
TCCTCTTTGGCGTGGCCCTCTTAGCCTCGGGTCAGAACAGCACCCTCACA
GGCACTCTTGCCGGTCAAATCGTCATGGAGGGCTTCGTGCAGGTCCGCCT
CAAGCCCTGGCTGCGTCGTCTCTTGACGCGATTGACGGTGGTGGTGCCGG
CCGTGCTAACAGTCGCACTCACAGGAGAGACGGGGGCGGATTTCCTGCTC
GTTTTGTCACAGGTCATCCTCTCCCTTCAGCTCTCGTTCGCCGTCTTTCC
CCTCATCATTTTCACGGGCGACATCTCCATTATGGGGCCTGCATTTGTCA
ATTCCCCTTTTACCTCCGCGTGTGCCTGGATCTCTGCCGTGCTCATCGCT
ATTTTGAACATTTGGTTGCTTGTAATGACAGCTGCCCAAGGCGGCGTCCC
ATCATAATCGCCCTTCCTCCCTCCCTCCCTTCCTCCCTCCCTCTCTGGTC
GACTCGACGTCAGTTACATTATTGCCTTGAGTATACCGCTGCTGCTCGGA
GCGGCGGCCATCGCACTCCCTCCTCCCCTCCCTCCTCTCTGCCTACTTTC
CTCCCTGCCTCTGCCTTTGGCTTTTTCGTAGCCCGCCTGCCCTCTCTTCC
TGCCTCCTACCCTTTCCCTTTCCCTCTCAAACGAGAATTCCGGAAGCTGA
CTCTAGACTGTAAGGCAGTGCATCCTTCTTTTATCAAAAGAAGGAGAGCA
TGGAGACATTCGAAGAATGAAAAAATAGGATTTATTTTATCGGAGAGGTA
GGAGTGTGAATCAAAATGGGAGGAAAAAAGAAGAATGATAAAAAAGGCAT
GAAAAAAAGAGAAAGAAGAAGAGAAAATGGCGCAAAAGAAAAGGGCGCGA
AACGAAAATAAAATTGTATTTAATGTACCATAGAATTCAGCGACGGGAAT
AGAAGGGGAAAGATCAAGTTACATTCTCCCATCACCAGCAACAACAAAAT
CAATACTTACTGTTGCATCAAAATTAGAGAGAAACATTGAAATGATACTC
AAGCAGTAGGATATAACGACAAGGGAAGGGAGGAAGAGAAATGAGAGAAC
GAAGAAGGCATCCAAGATGTGGGTAGGTGCGCGGGTCCTTGATTGATTGC
TTTCGTAATGGACAAGAGGCCGATGCATTTTTCCCGGCTTTAGAGAAAGC
GTAAACCCTGTGGTTGGGCATGATCCTCTCACCTGGCTGACATCACGTCT
GACTCAAATCAGGGGGGGGGGGCATGGATTGACTTTAACCGAGTGGCAGG
ATGCCGTAAGGAGAAGGCGAAACAGAAGGAGATGGAGTAAAAAAGAGAAG
GAAGTAGAAGGAGAGGTAGTGATAGACGAAGAGAGATAGCGGATTTAGAC
ATAAACAGGACACAATAAAGATAAGCACATGGTGTATGCGTTGATTAGGA
AAGAAGGAAAAGAGACCAGCGAAACTCTTCCTACTGACGACAGTCAAGCA
CATTCTGTCGATTCGGCTGTTTCGGGATCTTGGCTTCTGTGAGTGTGTGC
ATGAGTAGGGAAGGCCCTTATCCCTCCTTATCCTCTCTTTCCCGTATGCC
GCCTCCCTCTCGCTTTCTCTCTCTTTCTTCGTAAACCTACATGTATGTGT
GCACTCTTCTCTCTTGCTCCCTTGTCTGTACAGCGTGCTTTCCTCCCTTC
CTCTCTTCTTCTCCCTCTCTCTCATAGTAGCCCTAAATTGAGCATTTTCT
CGCCTTTTCTTTCAATTTAACTTAATCAACAATGAAAAAACACACTCTTT
TCCCCTTTCTCCCTCCCTTTTCTTTCTTCCTTCATTCTCCCCTTCCCCTC
CCACCCTTGAGGCTGGTGGCCTGGCCAACATATGCGACCAGTACACGCAC
CACCCATCACCCACCCATCACTCTACGTACCCTGTCAGAGCACTGGGCTG
CACACACGGGCCAAGAAAACAAGCCAACTTCCCTTTCGAACAGCAGCCCG
CATGTACCACAAAGCCCCCGAGAAGGGTGCCATGTACTTACGACATACTA
GGGTACGGGTGAAAAGATAAAAGGAAGAAGGTTGGTATCCTGAGCAAAGC
TACGTTCAGCTCGTTCCTCCGTTGTCGTCCATGATCTTTGATCCGTGGAA
GACTTGAGGAGTGGCCGTGGGGGCGGGAGTGGTAGCCAAGGGCTCAGGAA
CAATTGCCAACATCGGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGAGGC
GGAGACAGGACCTGCGGGGCGGTAATTTCTTCATTGTCATACATGCGCTG
AGAGTCGCCAACGTCCACCACATCGGTCGGAGGAGGGAGGGCAGCTAGCG
TCACAGGAGGTTTAATGGGCAGGGCCGTGGACTGCGGAGGCACAGGTTTA
GATGCAATCACCTCACCGGTATCAAACATCCATTCCTGCTCTTGGTGCTG
CGGGAGCAAGGGCAGGGGTTCAGGTGCCGCAGGCTCCCCATTATCAAGTA
TCTTGCCGGCGTGGCGCGTCGCTGCAAGGGGGTCGATCTTTTCAGAGACA
GCGGACTTGCGGCCTTCAACCAAACGTTCCTCCTCTTCTTCGGGGTCCCC
ATTGTCGAGCATCTTGGCACCATGTCGTTGTTCTTCGAGAGTGCTTATAG
GCTGGGGTTGGGGAGCGGCCGGATTGCCTGGGTCGTACATCATGCCACGC
AAGAAGGACGACGACGAAGGGGCGCCATCTGAGGCGGAGCGGAGGTACCC
ATGCGGGTGAGTCGTTTTAGTGTCTTGAAAAGGGGATGACTGGGTTGGCG
AAGGCAAAATGCACAAGGCACCAACCAGAAAAGATAGTGACAATGTCCTC
TTTTGCATGGTGATGCGTGATGTCTCGCCTTCCCTGTTCTGT

protein sequence of NO08G00360.1

>NO08G00360.1-protein ID=NO08G00360.1-protein|Name=NO08G00360.1|organism=Nannochloropsis oceanica|type=polypeptide|length=605bp
MPSACIPENGSMLSDSHTKKDMKTNGSSSSSSHGHGPLSTTYLTLNGGLH
PPPQHPSSQRQACGTGSVWRSFGTKVKQFLFVQPPHPSSSASSSYSASST
AEERLPLRSHQGGNNVRSLHVTPLPSSSSSSFCSSSSTHHPATRLLPSSQ
LPPSLLPSLPEAYHSVPVPRTRPGEATWLSRCRTLLAYVGPGYMVAVGYM
DPGNWATDIAGGALYNYGLLSVVLCSSLLAIFLQVLTVKLGIATKRDLAQ
LCADVYSPRFSTFLWITAEIAIAACDLAEVIGSAMALQLLFGVPMVWGCG
LTALDVLIVLSFFDKPGRRFRVLEMGVMGLIAIIFVCFALEIALSQPSFL
GVMKGFLLPDLYPLVTEAPRLYIAMGILGATVMPHNLYLHSSLVQTRDYG
ESDDDKAEAIFYSSLDTIIALSLALFVNAAILIVSAAAFFDPSAVTQFAP
SVSEAYDLLAPVLGNKAASILFGVALLASGQNSTLTGTLAGQIVMEGFVQ
VRLKPWLRRLLTRLTVVVPAVLTVALTGETGADFLLVLSQVILSLQLSFA
VFPLIIFTGDISIMGPAFVNSPFTSACAWISAVLIAILNIWLLVMTAAQG
GVPS*

mRNA from alignment at chr8:141883..149095-

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO08G00360.1 ID=NO08G00360.1|Name=NO08G00360.1|organism=Nannochloropsis oceanica|type=mRNA|length=7213bp|location=Sequence derived from alignment at chr8:141883..149095- (Nannochloropsis oceanica)
CACGCAAGCCGCAAGCCCATGTCCCCTCCTCACTTTGCTCCCTAGCAAAT
GCACCAATCCTTCCTGCGAGTCGTTCGATGGCAAGCAACATATTGGTCAA
GCCATGACTAATGCTGCCTTCGTTGGTCTACGAATAGCATTGCTGCCTTC
ATAACCGACTCCCAGGCTCGTACGACATGTCAACCCTCAATCTCCATCAT
GGCGAGCCCATCTTATTTTTACGTTGCAGTTCCTCGCCACCATCCCTTCA
CAGGCCTTCGCATCCCAAGTACTATTCCCCCACCGCCGACACATGCCCTC
TGCTTGCATTCCGGAAAACGGTAGCATGCTCTCTGACTCCCACACCAAGA
AAGACATGAAGACCAACGGTAGCAGCAGCAGCAGCAGCCATGGACACGGG
CCACTATCGACGACCTATCTCACCCTCAATGGGGGCCTACATCCACCACC
ACAACACCCAAGCTCTCAGAGACAAGCATGCGGGACAGGAAGTGTCTGGC
GCTCCTTTGGTACAAAGGTCAAGCAGTTCCTGTTCGTGCAACCCCCCCAC
CCCTCCTCCTCTGCTTCCTCCTCATACTCCGCATCCTCGACCGCCGAGGA
ACGCCTCCCCCTCCGCAGCCACCAAGGCGGGAACAATGTACGGAGTCTGC
ACGTTACGCCTCTACCATCATCATCCTCTTCCTCCTTCTGCTCTTCTTCC
TCCACCCATCACCCAGCCACCCGCCTGCTACCCTCGTCACAATTGCCTCC
CTCCCTCCTGCCCTCCCTCCCAGAGGCCTACCACTCCGTCCCTGTCCCTC
GCACGCGTCCTGGAGAGGCCACCTGGCTCTCTCGTTGCCGGTAAGAAGAT
GGAGCAGGAAAGCCATGGTGAAACAAGAAGGGAGTCTAAAGAGGAAGAAA
TAAAGCGTGGGAAAGCACATCATAGAATTGATAGGACGACCCCCTTGCCC
TCCTTCCCACTCTCCCTCCCTCACTCCTCCCCTCCTTTCTTCTTCATCAA
CAGCACTCTCCTAGCGTACGTGGGTCCTGGTTACATGGTCGCGGTGGGGT
ACATGGATCCCGGGAATTGGGCTACAGACATTGCGGTAAGGAGGGAGGGA
GGGAGGGAGGGAGGGAGGGAGAGAGGGAGAGAGGGAGGGAGGGAGGGAGG
GAGGGAGGGAGGGAGGGAAGGAAGGAAGATGGATAAGTCAACCGCGAGTC
CTCCACATCCGTTCGCACTTATACTGGACACACTTTCTTCCTCCTTCCCT
TCTTCTACTGTTCCTCTCGTCGATATCAATGCCCTCCTTTTTACCATCCT
CTGCTCCTCCACACCCTGACCGCCAATCCCCCCCCCCCCTCCTCCCTCCT
TCCCTCCCTCCTTCCTGCCTTCCTCAGGGTGGCGCCCTCTACAACTACGG
TCTCCTTTCCGTCGTCCTCTGCTCCTCTCTCCTCGCTATCTTCCTTCAAG
TCCTGACCGTTAAACTCGGCATCGCCACCAAGCGGGACCTTGCGCAGCTC
TGTGCCGATGTCTACTCCCCGCGTTTCTCCACCTTCTTGTGGATCACTGC
CGAAATCGCGATTGCGGCGTGTGATTTGGCAGAGGTTATAGGTAGGTCTT
CCTCATTCCCTGCCTCACTTCCTTTTTCCCTCCTTTCCTCCCTGGCCACA
GCTGTCGTCGCACCACTTCCCTTCCCTTCCCTCCCTCCCTCCCTCCCTCC
CTCCCTCCCTCCCTCCCTCCCTCTCTTCTTTCCCCTCAGGCTCGGCCATG
GCTCTGCAGCTCTTGTTTGGTGTACCGATGGTGTGGGGATGTGGCCTCAC
AGCCCTAGGTAGGCTGAGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGG
AGGGAGGGAGGACATGGGTTTCGGACATTCTTCTTCTCCCTCGGATCCTT
TACTCAGGGCCCATGGCAACTATGGAGAGAGATCCATTGATCACTTTCTC
CCTCCCTCCCTCCCTCCCTTTCTCTCTTCCTGCAGATGTCCTGATCGTCC
TCTCCTTCTTCGACAAGCCCGGACGTCGCTTCCGGGTATTGGAAATGGGG
GTGATGGGGCTTATTGCCATCATCTTCGTGTGTTTCGCGCTTGAAATCGC
CCTATCCCAGCCTTCCTTTCTAGGTATATCCCCCCCCCTTCGCTCCCTCT
CTCCCTCATTCGATCGCTGCCTCTCTCCCTATACTTCCCATGACATACAT
TCATTACCTAACCCTCCCTCCCTCCCTCCCTCCCTCCTTCCCTCCCTCCT
TCCCTCCCTCCTTCCCGCTCTCCTTCCCGCTCTCCTTCCCTCCCTCCCGC
CTTAAGGTGTGATGAAGGGTTTCCTTCTCCCGGACCTCTACCCGCTGGTC
ACAGAGGCCCCGCGCTTGTACATCGCTATGGGTAGGGAGGGAGGGAGGGA
GGGAGGGAGGGAGGGAATGGGAGGAGAAAGTGGGAGGAGAATCCCTACAG
CGGGTGTGAAGGAGGGAATGAAAGAGGAATTGAGGGAGGGAGGGTAACCC
TAACAGAGCCTTGGTCGCTGTCTTGACCCCCTCAGTAGCTGGTCTCCTTT
CTGAAACCCGAAGCCTAATCAACACCTAACCTAAACCGGAGGCCTAATCA
ACACCTAACTAACCTAAACCGGAGGCCTAATCAACACCTAACTAACCTAA
ACCGGAGGCCTAATCAACACCTAACTAACCTAAACCGGAGGCCTAATCAA
CACCTAACTAACCTAAACCGGAGGCCTAATCAACACCTAACTAACCTAAA
CCGGAGGCCTAATCAACACCTAACTAACCTAAACCGGAGGCCTAATCAAC
ACCTAACTAACCTAAACCGGAGGCCTAATCAACACCTAACTAACCTAAAC
CGGAGGCCTAATCAACACCTAACTAACCTAAACCGGAGGCCTAATCAACA
CCTAACTAACCTAAACCGGAGGCCTAATCAACACCTAACTAACCTAAACC
GGAGGCCTAATCAACACCTAACTAACCTAAACCGGAGGCCTAATCAACAC
CTAACTAACCTAAACCGGAGGCCTAATCAACACCTAACTAACCTAAACCG
GAGGCCTAATCAACACCTCACCTCAACTTTAACCCTACTTACTACCTAAC
CTCGACCCTACACCCAAGCCAAACCAAACCCAAAGCCTAATTAACACCTC
ATCTAAATCCTAAGCTGTATCAATACCTAATAGCCCTAAGCCTAATCAAC
ACCTTATGTCTAACCTATAACCCTAACCTTACAGGCATTTTGGGTGCCAC
AGTCATGCCGCACAATCTGTACCTGCACTCCTCCCTCGTCCAAACCCGGG
ACTACGGCGAGAGCGACGACGACAAGGCGTAAGTAGGGAGGGAAGGACGG
GAGGAGGGAGGGAAGGAGGGAGGGCATTGCTCACCAGCTGGGCATATGGG
ATTGCTGCTTGTTCTGACCCTCCTTTCCTCCCTCCCTCCCTCCTCGTGTT
AATGCCTCCACTTTCATCATTCTCGCCACTGCCTTTTCTCACCCTCCCTC
CCTCCCTCCCTCCTCGTGTCAATGCCTCCACTTTCATCATTCTCGCCACT
GCCTTTTCTCACCCTCCCTCTCTTTAGCGAGGCCATCTTCTACTCCTCCC
TGGACACCATCATCGCCCTCTCTCTCGCCCTCTTCGTGAATGCCGCCATC
CTCATTGTCTCAGCCGCAGCCTTTTTCGATCCTTCTGCAGTCACTCAGTT
CGCTCCGTCCGTTTCCGAGGCATACGACTTGCTGGCGCCAGTCCTCGGTA
AGGAAAGAGGGAGGAAGGGAGGGGGGAAGGAAGGAAATAGATTGAAGGTC
TGCTTCATGTCGCGGTTTTCTTCTTCCAAGCACTCTCCACCGTCGTCATC
TCCCTCCCTCCCTCCCTCCCTCCCTCTCACCCTCTCACCCTCTCTTCCTC
CCCCCTTTCAGGCAACAAAGCGGCCTCAATCCTCTTTGGCGTGGCCCTCT
TAGCCTCGGGTCAGAACAGCACCCTCACAGGCACTCTTGCCGGTCAAATC
GTCATGGAGGGCTTCGTGCAGGTACACACCCCTCCCTCTCTCCCTCCCTC
TCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCTCTCCACTCA
CCACTCTCTAGTTCCTGATATGCGATAGTCTTCCAGCTCGATCTGCCTTC
CCAAGAGCTTGATTGTCCTCCCTCTCTCCCCCACTCCCTCCCTTCCTCTC
TCCCTCCCTCAGGTCCGCCTCAAGCCCTGGCTGCGTCGTCTCTTGACGCG
ATTGACGGTGGTGGTGCCGGCCGTGCTAACAGTCGCACTCACAGGAGAGA
CGGGGGCGGATTTCCTGCTCGTTTTGTCACAGGTAGGGAGGGAGAGAGGG
AAGGAGGGAAAGAGGGAGGGTGTGTGGTTGTTTCGGTCCTCATGGTAGTA
GTAATGGCAGCGGAAGAGGGAGCAGGTCTCCTGCTGCTTCTCACACTCTT
AGGGAGGGAGGAGGGAAAGAGGAAGGAAGAATGGAAAGAGGGAAAACGGA
GAACGAAAGCCAGGATTTACAAAGGTCAAATTAACTCTCTCCTGCCCTCC
CGCCCTCCCTCCTTCCCTCCTTCCCTCCCTCAGGTCATCCTCTCCCTTCA
GCTCTCGTTCGCCGTCTTTCCCCTCATCATTTTCACGGGCGACATCTCCA
TTATGGGGCCTGCATTTGTCAATTCCCCTTTTACCTCCGCGTGTGCCTGG
ATCTCTGCCGTGCTCATCGCTATTTTGAACATTTGGTTGCTTGTAATGAC
AGCTGCCCAAGGCGGCGTCCCATCATAATCGCCCTTCCTCCCTCCCTCCC
TTCCTCCCTCCCTCTCTGGTCGACTCGACGTCAGTTACATTATTGCCTTG
AGTATACCGCTGCTGCTCGGAGCGGCGGCCATCGCACTCCCTCCTCCCCT
CCCTCCTCTCTGCCTACTTTCCTCCCTGCCTCTGCCTTTGGCTTTTTCGT
AGCCCGCCTGCCCTCTCTTCCTGCCTCCTACCCTTTCCCTTTCCCTCTCA
AACGAGAATTCCGGAAGCTGACTCTAGACTGTAAGGCAGTGCATCCTTCT
TTTATCAAAAGAAGGAGAGCATGGAGACATTCGAAGAATGAAAAAATAGG
ATTTATTTTATCGGAGAGGTAGGAGTGTGAATCAAAATGGGAGGAAAAAA
GAAGAATGATAAAAAAGGCATGAAAAAAAGAGAAAGAAGAAGAGAAAATG
GCGCAAAAGAAAAGGGCGCGAAACGAAAATAAAATTGTATTTAATGTACC
ATAGAATTCAGCGACGGGAATAGAAGGGGAAAGATCAAGTTACATTCTCC
CATCACCAGCAACAACAAAATCAATACTTACTGTTGCATCAAAATTAGAG
AGAAACATTGAAATGATACTCAAGCAGTAGGATATAACGACAAGGGAAGG
GAGGAAGAGAAATGAGAGAACGAAGAAGGCATCCAAGATGTGGGTAGGTG
CGCGGGTCCTTGATTGATTGCTTTCGTAATGGACAAGAGGCCGATGCATT
TTTCCCGGCTTTAGAGAAAGCGTAAACCCTGTGGTTGGGCATGATCCTCT
CACCTGGCTGACATCACGTCTGACTCAAATCAGGGGGGGGGGGCATGGAT
TGACTTTAACCGAGTGGCAGGATGCCGTAAGGAGAAGGCGAAACAGAAGG
AGATGGAGTAAAAAAGAGAAGGAAGTAGAAGGAGAGGTAGTGATAGACGA
AGAGAGATAGCGGATTTAGACATAAACAGGACACAATAAAGATAAGCACA
TGGTGTATGCGTTGATTAGGAAAGAAGGAAAAGAGACCAGCGAAACTCTT
CCTACTGACGACAGTCAAGCACATTCTGTCGATTCGGCTGTTTCGGGATC
TTGGCTTCTGTGAGTGTGTGCATGAGTAGGGAAGGCCCTTATCCCTCCTT
ATCCTCTCTTTCCCGTATGCCGCCTCCCTCTCGCTTTCTCTCTCTTTCTT
CGTAAACCTACATGTATGTGTGCACTCTTCTCTCTTGCTCCCTTGTCTGT
ACAGCGTGCTTTCCTCCCTTCCTCTCTTCTTCTCCCTCTCTCTCATAGTA
GCCCTAAATTGAGCATTTTCTCGCCTTTTCTTTCAATTTAACTTAATCAA
CAATGAAAAAACACACTCTTTTCCCCTTTCTCCCTCCCTTTTCTTTCTTC
CTTCATTCTCCCCTTCCCCTCCCACCCTTGAGGCTGGTGGCCTGGCCAAC
ATATGCGACCAGTACACGCACCACCCATCACCCACCCATCACTCTACGTA
CCCTGTCAGAGCACTGGGCTGCACACACGGGCCAAGAAAACAAGCCAACT
TCCCTTTCGAACAGCAGCCCGCATGTACCACAAAGCCCCCGAGAAGGGTG
CCATGTACTTACGACATACTAGGGTACGGGTGAAAAGATAAAAGGAAGAA
GGTTGGTATCCTGAGCAAAGCTACGTTCAGCTCGTTCCTCCGTTGTCGTC
CATGATCTTTGATCCGTGGAAGACTTGAGGAGTGGCCGTGGGGGCGGGAG
TGGTAGCCAAGGGCTCAGGAACAATTGCCAACATCGGCTGCTGCTGCTGC
TGCTGCTGCTGCTGCTGAGGCGGAGACAGGACCTGCGGGGCGGTAATTTC
TTCATTGTCATACATGCGCTGAGAGTCGCCAACGTCCACCACATCGGTCG
GAGGAGGGAGGGCAGCTAGCGTCACAGGAGGTTTAATGGGCAGGGCCGTG
GACTGCGGAGGCACAGGTTTAGATGCAATCACCTCACCGGTATCAAACAT
CCATTCCTGCTCTTGGTGCTGCGGGAGCAAGGGCAGGGGTTCAGGTGCCG
CAGGCTCCCCATTATCAAGTATCTTGCCGGCGTGGCGCGTCGCTGCAAGG
GGGTCGATCTTTTCAGAGACAGCGGACTTGCGGCCTTCAACCAAACGTTC
CTCCTCTTCTTCGGGGTCCCCATTGTCGAGCATCTTGGCACCATGTCGTT
GTTCTTCGAGAGTGCTTATAGGCTGGGGTTGGGGAGCGGCCGGATTGCCT
GGGTCGTACATCATGCCACGCAAGAAGGACGACGACGAAGGGGCGCCATC
TGAGGCGGAGCGGAGGTACCCATGCGGGTGAGTCGTTTTAGTGTCTTGAA
AAGGGGATGACTGGGTTGGCGAAGGCAAAATGCACAAGGCACCAACCAGA
AAAGATAGTGACAATGTCCTCTTTTGCATGGTGATGCGTGATGTCTCGCC
TTCCCTGTTCTGT

Coding sequence (CDS) from alignment at chr8:141883..149095-

>NO08G00360.1 ID=NO08G00360.1|Name=NO08G00360.1|organism=Nannochloropsis oceanica|type=CDS|length=1815bp|location=Sequence derived from alignment at chr8:141883..149095- (Nannochloropsis oceanica)
ATGCCCTCTGCTTGCATTCCGGAAAACGGTAGCATGCTCTCTGACTCCCA
CACCAAGAAAGACATGAAGACCAACGGTAGCAGCAGCAGCAGCAGCCATG
GACACGGGCCACTATCGACGACCTATCTCACCCTCAATGGGGGCCTACAT
CCACCACCACAACACCCAAGCTCTCAGAGACAAGCATGCGGGACAGGAAG
TGTCTGGCGCTCCTTTGGTACAAAGGTCAAGCAGTTCCTGTTCGTGCAAC
CCCCCCACCCCTCCTCCTCTGCTTCCTCCTCATACTCCGCATCCTCGACC
GCCGAGGAACGCCTCCCCCTCCGCAGCCACCAAGGCGGGAACAATGTACG
GAGTCTGCACGTTACGCCTCTACCATCATCATCCTCTTCCTCCTTCTGCT
CTTCTTCCTCCACCCATCACCCAGCCACCCGCCTGCTACCCTCGTCACAA
TTGCCTCCCTCCCTCCTGCCCTCCCTCCCAGAGGCCTACCACTCCGTCCC
TGTCCCTCGCACGCGTCCTGGAGAGGCCACCTGGCTCTCTCGTTGCCGCA
CTCTCCTAGCGTACGTGGGTCCTGGTTACATGGTCGCGGTGGGGTACATG
GATCCCGGGAATTGGGCTACAGACATTGCGGGTGGCGCCCTCTACAACTA
CGGTCTCCTTTCCGTCGTCCTCTGCTCCTCTCTCCTCGCTATCTTCCTTC
AAGTCCTGACCGTTAAACTCGGCATCGCCACCAAGCGGGACCTTGCGCAG
CTCTGTGCCGATGTCTACTCCCCGCGTTTCTCCACCTTCTTGTGGATCAC
TGCCGAAATCGCGATTGCGGCGTGTGATTTGGCAGAGGTTATAGGCTCGG
CCATGGCTCTGCAGCTCTTGTTTGGTGTACCGATGGTGTGGGGATGTGGC
CTCACAGCCCTAGATGTCCTGATCGTCCTCTCCTTCTTCGACAAGCCCGG
ACGTCGCTTCCGGGTATTGGAAATGGGGGTGATGGGGCTTATTGCCATCA
TCTTCGTGTGTTTCGCGCTTGAAATCGCCCTATCCCAGCCTTCCTTTCTA
GGTGTGATGAAGGGTTTCCTTCTCCCGGACCTCTACCCGCTGGTCACAGA
GGCCCCGCGCTTGTACATCGCTATGGGCATTTTGGGTGCCACAGTCATGC
CGCACAATCTGTACCTGCACTCCTCCCTCGTCCAAACCCGGGACTACGGC
GAGAGCGACGACGACAAGGCCGAGGCCATCTTCTACTCCTCCCTGGACAC
CATCATCGCCCTCTCTCTCGCCCTCTTCGTGAATGCCGCCATCCTCATTG
TCTCAGCCGCAGCCTTTTTCGATCCTTCTGCAGTCACTCAGTTCGCTCCG
TCCGTTTCCGAGGCATACGACTTGCTGGCGCCAGTCCTCGGCAACAAAGC
GGCCTCAATCCTCTTTGGCGTGGCCCTCTTAGCCTCGGGTCAGAACAGCA
CCCTCACAGGCACTCTTGCCGGTCAAATCGTCATGGAGGGCTTCGTGCAG
GTCCGCCTCAAGCCCTGGCTGCGTCGTCTCTTGACGCGATTGACGGTGGT
GGTGCCGGCCGTGCTAACAGTCGCACTCACAGGAGAGACGGGGGCGGATT
TCCTGCTCGTTTTGTCACAGGTCATCCTCTCCCTTCAGCTCTCGTTCGCC
GTCTTTCCCCTCATCATTTTCACGGGCGACATCTCCATTATGGGGCCTGC
ATTTGTCAATTCCCCTTTTACCTCCGCGTGTGCCTGGATCTCTGCCGTGC
TCATCGCTATTTTGAACATTTGGTTGCTTGTAATGACAGCTGCCCAAGGC
GGCGTCCCATCATAA

Synonyms

Publications