NO08G00150.1, NO08G00150.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO08G00150.1
Unique NameNO08G00150.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1460
Alignment locationchr8:58482..60469 +

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Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr8genomechr8:58482..60469 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
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BLAST of NO08G00150.1 vs.
Match: EWM26517.1 (Cell division protein borealin [Nannochloropsis gaditana])

HSP 1 Score: 322.0 bits (824), Expect = 2.600e-84
Identity = 205/298 (68.79%), Postives = 229/298 (76.85%), Query Frame = 0 
Query:    1 MGTGRATTGKKRGGGGGSVSEAAALAKSKAGPEGVLTALSSIKPEELQHVMEEIETEMYSRAKRLRLEAEEHALSLQNAFHVELMKLPKSVRAMSLREFSEQYGEDIRSVMRLAVEEEASRALSQSHHKQQQRQQQQRRKKGLTGTVVKAAPPTAGRTSRSGAG-----GRAAGAAGAGAVSRSSEGGGGAGGGRMSTRSSSISSSSNTARNSSNSIRTSVNSGGGLVMTVMQTPMGVGGGRATRSGRGRVRGMGGVHQTPMMKFDPRLPTTPGIRAPRYGESVLSVNGSPLQVPLPV 294
            MG+GRA TGKKRGGGGGSV EAA LA+ K G EGVL +LS+IKPEEL+H+M EIE EM +RAKRLR+EAEEHALSLQNAFHVE+MKLPKSVRAMSLREFS+QYGEDIR+VMRLAVEEEASRALSQSHHKQQQRQQ +R K  + GTVVKAAP   GR+SR  +G     G     AGA +  + +  G     GRM+TR SS+    +  R     +RTSVNS GGLVMT+MQTPM  GG R TRS  GRVRGM        M+FDPRLP TPGIRAPRYGESVLSVNGSPLQVPLPV
Sbjct:    1 MGSGRAVTGKKRGGGGGSVLEAATLAEGKVGAEGVLNSLSNIKPEELEHIMVEIEAEMNTRAKRLRVEAEEHALSLQNAFHVEMMKLPKSVRAMSLREFSDQYGEDIRTVMRLAVEEEASRALSQSHHKQQQRQQLRRNKGPVNGTVVKAAPRNRGRSSRIESGKEVGHGERRSTAGASSSHKPARHGVDGVPGRMTTRGSSL--CGDAGRGEGMGVRTSVNSSGGLVMTLMQTPM-EGGSRNTRS--GRVRGMAAQTPRMTMRFDPRLPMTPGIRAPRYGESVLSVNGSPLQVPLPV 293
The following BLAST results are available for this feature:
BLAST of NO08G00150.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1
Match NameE-valueIdentityDescription
EWM26517.12.600e-8468.79Cell division protein borealin [Nannochloropsis ga... [more]
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO08G00150NO08G00150Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO08G00150.1NO08G00150.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO08G00150.1.cds1NO08G00150.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO08G00150.1.cds2NO08G00150.1.cds2Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO08G00150.1.cds3NO08G00150.1.cds3Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO08G00150.1.cds4NO08G00150.1.cds4Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO08G00150.1.cds5NO08G00150.1.cds5Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO08G00150.1 ID=NO08G00150.1|Name=NO08G00150.1|organism=Nannochloropsis oceanica|type=mRNA|length=1460bp
ACAGACACATTCAAGTCAGCAGTGGTACCAGGACAAGACAAATTTCATGG
GCACTGGACGTGCCACCACGGGCAAAAAGCGTGGGGGCGGGGGTGGCTCT
GTGTCGGAGGCGGCGGCGTTGGCAAAGAGCAAGGCAGGACCGGAGGGAGT
CTTGACGGCCTTGTCCAGCATCAAGCCGGAGGAGCTGCAGCACGTCATGG
AGGAAATCGAGACGGAGATGTACTCCCGCGCCAAGCGCCTCCGTTTGGAA
GCGGAGGAGCACGCACTGTCCCTCCAGAATGCTTTTCATGTAGAGTTGAT
GAAGTTGCCCAAGTCAGTGCGGGCCATGTCACTGCGGGAGTTCTCTGAGC
AGTACGGCGAGGACATTCGCTCCGTGATGCGCCTGGCCGTGGAAGAAGAA
GCCTCTCGCGCCCTCTCCCAAAGCCACCACAAGCAGCAGCAACGGCAACA
ACAACAGCGGAGGAAAAAGGGTTTGACTGGCACAGTCGTAAAGGCTGCCC
CGCCCACAGCGGGGCGGACGAGTCGAAGCGGTGCAGGAGGGCGAGCAGCA
GGAGCAGCAGGAGCAGGAGCAGTATCACGGTCCTCGGAGGGAGGAGGAGG
GGCCGGTGGAGGAAGGATGTCGACGCGGAGCAGCAGCATCAGCAGCAGTA
GCAACACGGCCAGGAATAGCAGCAACAGTATTCGCACGAGCGTCAACAGT
GGGGGGGGCTTGGTGATGACGGTCATGCAAACCCCTATGGGAGTCGGGGG
GGGGAGGGCGACGCGCTCCGGTCGAGGGCGGGTGCGAGGGATGGGAGGGG
TGCACCAGACCCCCATGATGAAATTCGATCCCCGCCTGCCGACAACTCCG
GGTATTCGGGCGCCGAGGTATGGAGAGAGCGTGCTGAGTGTGAATGGCTC
GCCGCTGCAGGTGCCACTGCCGGTGGACGCCGAAGCGATGGAAGATGAAG
ACACGGCCGCCTTCACGCGCGCGGCCCTTGGAGGAGGGCGAGAGGGTGAA
GGAGGAGGGAGTGGGTCACCGTCGTTGATGATTGAGCTGCCCAACGGCGG
AGGAGAGACTGTGGACATCTTCAAGGACCCCTCGGCTTTGGCGCACATGG
ACAGCCAAATGAAGGCGGACGTGGCGAGTAAGATCGAGAGACTGCAGAGT
GGGCTTGCATATGTCTTGCAGCATATCGGGGGGGCGTTGCTTGGTGGAGG
AGGAGGAGGGGAGGGAGGCGGGAAGAGCAATTGAAGATGGGAGTGAAACA
GAACAAGAGGGTCACAGAAGGCAAGCGCAAGGTCACAGACATGAGTGTGA
GAACTATAGGAAAACCACGACAAGGAGAACGAGGAAGAGGAAGATGGAGG
AAAAGGGGTATCAAAATGAAGGGAAACTGAAGAAGTAGTGCGAGTATGTG
CGTGTGTAGAGCGAGGATGAACGATTTGATGAGGAAACTAAAACGAAGGC
CTTGGAGCAA
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protein sequence of NO08G00150.1

>NO08G00150.1-protein ID=NO08G00150.1-protein|Name=NO08G00150.1|organism=Nannochloropsis oceanica|type=polypeptide|length=396bp
MGTGRATTGKKRGGGGGSVSEAAALAKSKAGPEGVLTALSSIKPEELQHV
MEEIETEMYSRAKRLRLEAEEHALSLQNAFHVELMKLPKSVRAMSLREFS
EQYGEDIRSVMRLAVEEEASRALSQSHHKQQQRQQQQRRKKGLTGTVVKA
APPTAGRTSRSGAGGRAAGAAGAGAVSRSSEGGGGAGGGRMSTRSSSISS
SSNTARNSSNSIRTSVNSGGGLVMTVMQTPMGVGGGRATRSGRGRVRGMG
GVHQTPMMKFDPRLPTTPGIRAPRYGESVLSVNGSPLQVPLPVDAEAMED
EDTAAFTRAALGGGREGEGGGSGSPSLMIELPNGGGETVDIFKDPSALAH
MDSQMKADVASKIERLQSGLAYVLQHIGGALLGGGGGGEGGGKSN*
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mRNA from alignment at chr8:58482..60469+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO08G00150.1 ID=NO08G00150.1|Name=NO08G00150.1|organism=Nannochloropsis oceanica|type=mRNA|length=1988bp|location=Sequence derived from alignment at chr8:58482..60469+ (Nannochloropsis oceanica)
ACAGACACATTCAAGTCAGCAGTGGTACCAGGACAAGACAAATTTCATGG
GCACTGGACGTGCCACCACGGGCAAAAAGCGTGGGGGCGGGGGTGGCTCT
GTGTCGGAGGCGGCGGCGTTGGCAAAGAGCAAGGCAGGACCGGAGGGAGT
CTTGACGGCCTTGTCCAGCATCAAGCCGGAGGAGCTGCAGCACGTCATGG
AGGAAATCGAGACGGAGGTGGGTTTTCAGGGAGATGAGAAAAGACTGCGG
GATGGAACTGCGAACACCCATGACATGCTCTTTTTATAGTCATCAGACTC
CTGATTCCTTCCCTCCCCCGACGAACCAGATGTACTCCCGCGCCAAGCGC
CTCCGTTTGGAAGCGGAGGAGCACGCACTGTCCCTCCAGAATGCTTTTCA
TGTAGAGTTGATGAAGTTGCCCAAGTCAGTGCGGGCCATGTCACTGCGGG
AGTTCTCTGAGCAGTACGGCGAGGTGAGGGAAGGGAGGGAGAGAGGGAGG
GAAGGAGGGCAAGAAGAAAGCAGAGTGGGGGGAAGATCATCGACAGCGCG
AATTCTTGCCATGAGGACGTCTCTTCATCCTCCCTTTTCTCCCTCCCTCC
CTCCCTATCTCAGGACATTCGCTCCGTGATGCGCCTGGCCGTGGAAGAAG
AAGCCTCTCGCGCCCTCTCCCAAAGCCACCACAAGCAGCAGCAACGGCAA
CAACAACAGCGGAGGAAAAAGGGTTTGACTGGCACAGTCGTAAAGGCTGC
CCCGCCCACAGCGGGGCGGACGAGTCGAAGCGGTGCAGGAGGGCGAGCAG
CAGGAGCAGCAGGAGCAGGAGCAGTATCACGGTCCTCGGAGGGAGGAGGA
GGGGCCGGTGGAGGAAGGATGTCGACGCGGAGCAGCAGCATCAGCAGCAG
TAGCAACACGGCCAGGAATAGCAGCAACAGTATTCGCACGAGCGTCAACA
GTGGGGGGGGCTTGGTGATGACGGTCATGCAAACCCCTATGGGAGTCGGG
GGGGGGAGGGCGACGCGCTCCGGTCGAGGGCGGGTGCGAGGGATGGGAGG
GGTGCACCAGACCCCCATGATGAAATTCGATCCCCGCCTGCCGACAACTC
CGGGTATTCGGGCGCCGAGGTATGGAGAGAGCGTGCTGAGTGTGAATGGC
TCGCCGCTGCAGGTGCCACTGCCGGTGGACGCCGAAGCGATGGAAGGTAG
GGAGGGAGGGAGGGAGCGCGGGAGGGAGGGAGGACGGGGCAGTGGAAAAA
AGCGAATTTGGAGATTGCCCCTTGACATTTTTTGTTCCTATCATCATCGC
ATACATATACAATCACATATCAACATTTTAAATTCACAACAACATTTAAT
TAAACGCATATATGCGCGACACAGATGAAGACACGGCCGCCTTCACGCGC
GCGGCCCTTGGAGGAGGGCGAGAGGGTGAAGGAGGAGGGAGTGGGTCACC
GTCGTTGATGATTGAGCTGCCCAACGGCGGAGGAGAGAGTAAGTACGAAA
TTAGCTGGAATACGAATACAAAGGAACAACCATTCCACTTCAGCAATCTG
ACACTCCCTCCCTCGCTCCCTCGCTCCCTCCCTCAGCTGTGGACATCTTC
AAGGACCCCTCGGCTTTGGCGCACATGGACAGCCAAATGAAGGCGGACGT
GGCGAGTAAGATCGAGAGACTGCAGAGTGGGCTTGCATATGTCTTGCAGC
ATATCGGGGGGGCGTTGCTTGGTGGAGGAGGAGGAGGGGAGGGAGGCGGG
AAGAGCAATTGAAGATGGGAGTGAAACAGAACAAGAGGGTCACAGAAGGC
AAGCGCAAGGTCACAGACATGAGTGTGAGAACTATAGGAAAACCACGACA
AGGAGAACGAGGAAGAGGAAGATGGAGGAAAAGGGGTATCAAAATGAAGG
GAAACTGAAGAAGTAGTGCGAGTATGTGCGTGTGTAGAGCGAGGATGAAC
GATTTGATGAGGAAACTAAAACGAAGGCCTTGGAGCAA
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Coding sequence (CDS) from alignment at chr8:58482..60469+

>NO08G00150.1 ID=NO08G00150.1|Name=NO08G00150.1|organism=Nannochloropsis oceanica|type=CDS|length=1188bp|location=Sequence derived from alignment at chr8:58482..60469+ (Nannochloropsis oceanica)
ATGGGCACTGGACGTGCCACCACGGGCAAAAAGCGTGGGGGCGGGGGTGG
CTCTGTGTCGGAGGCGGCGGCGTTGGCAAAGAGCAAGGCAGGACCGGAGG
GAGTCTTGACGGCCTTGTCCAGCATCAAGCCGGAGGAGCTGCAGCACGTC
ATGGAGGAAATCGAGACGGAGATGTACTCCCGCGCCAAGCGCCTCCGTTT
GGAAGCGGAGGAGCACGCACTGTCCCTCCAGAATGCTTTTCATGTAGAGT
TGATGAAGTTGCCCAAGTCAGTGCGGGCCATGTCACTGCGGGAGTTCTCT
GAGCAGTACGGCGAGGACATTCGCTCCGTGATGCGCCTGGCCGTGGAAGA
AGAAGCCTCTCGCGCCCTCTCCCAAAGCCACCACAAGCAGCAGCAACGGC
AACAACAACAGCGGAGGAAAAAGGGTTTGACTGGCACAGTCGTAAAGGCT
GCCCCGCCCACAGCGGGGCGGACGAGTCGAAGCGGTGCAGGAGGGCGAGC
AGCAGGAGCAGCAGGAGCAGGAGCAGTATCACGGTCCTCGGAGGGAGGAG
GAGGGGCCGGTGGAGGAAGGATGTCGACGCGGAGCAGCAGCATCAGCAGC
AGTAGCAACACGGCCAGGAATAGCAGCAACAGTATTCGCACGAGCGTCAA
CAGTGGGGGGGGCTTGGTGATGACGGTCATGCAAACCCCTATGGGAGTCG
GGGGGGGGAGGGCGACGCGCTCCGGTCGAGGGCGGGTGCGAGGGATGGGA
GGGGTGCACCAGACCCCCATGATGAAATTCGATCCCCGCCTGCCGACAAC
TCCGGGTATTCGGGCGCCGAGGTATGGAGAGAGCGTGCTGAGTGTGAATG
GCTCGCCGCTGCAGGTGCCACTGCCGGTGGACGCCGAAGCGATGGAAGAT
GAAGACACGGCCGCCTTCACGCGCGCGGCCCTTGGAGGAGGGCGAGAGGG
TGAAGGAGGAGGGAGTGGGTCACCGTCGTTGATGATTGAGCTGCCCAACG
GCGGAGGAGAGACTGTGGACATCTTCAAGGACCCCTCGGCTTTGGCGCAC
ATGGACAGCCAAATGAAGGCGGACGTGGCGAGTAAGATCGAGAGACTGCA
GAGTGGGCTTGCATATGTCTTGCAGCATATCGGGGGGGCGTTGCTTGGTG
GAGGAGGAGGAGGGGAGGGAGGCGGGAAGAGCAATTGA
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Synonyms
Publications