NO08G00120.1, NO08G00120.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO08G00120.1
Unique Name	NO08G00120.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	2283
Alignment location	chr8:44495..50802 +

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr8	genome	chr8:44495..50802 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO08G00120.1 vs.
Match: XP_009032327.1 (hypothetical protein AURANDRAFT_52007 [Aureococcus anophagefferens]; EGB12671.1 hypothetical protein AURANDRAFT_52007 [Aureococcus anophagefferens])

HSP 1 Score: 953.4 bits (2463), Expect = 4.400e-274
Identity = 478/761 (62.81%), Postives = 594/761 (78.06%), Query Frame = 0

Query:    7 PNPVTIEEGWEKEILPKAILPLEKILNEGLQDRQKRDLFGPREYVHIYTICYNMCTQRNPFNWSEQLYAKHNETISNYLTQTVLPSLRDHHSEFLLVEVKRRWENHKIMNEWMRKFFMYLDRYYVKHNSLPSLHVSGIKFFKEQVYDVVKGDVVRAMLAMINLEREGQVIERALMRSCVEIFETMG-DQKECYKEDLEETLLSDTREYYARKSQEWIETDSTPAYLLKAEAALDEERARVFNYLNGETEDKLLKVVMEELLEKQETTLLEREGSGCAMLLANDKYDDLSRMYRLFSRVPNGLLPMAKIVQAHIEHMGGEVINQREARINEEGEKDSNQDPNFVKALLSLHDKCVGVVNAQFEKNSLFHKALKEAFVEFVNKDVGKYKNADLLSSFCDRVLKKGGEKLSDTEVEDHLEKVVNLFTYLTDKDLFAEIYRNQLAKRLLNARSSSDDWEKLMIGKLKHRCGAQFTGKMEGMLNDLAVGVDHQKEFLEHLK-SKSSSAGAASAGVSPLGPGSKMAPEDFSVKVLTTGYWPSYQQMDVRLPDEMLRCTQAFRAWYDLKNQRRRLAWQHALGSATLRAKFGAKTYDLQTNTLQAVLLLSFQSEGE----SLDFSTLKERLNVPVEQMKPLLHSLSCGKYKVLRKSPASDKIKETDSFAVHTGFSCPQRVIRIPMATIEESHNPNRVEEDRSIAIEAAIVRIMKARKVLTHQQLTSEVLSQLAFFRPSPKVVKQRIHALIDREYLERDEN-PNQYKYLA 761
            P  + +EEGW  EI  KAI  LE++LN G   + +R LF P+EYV  YT CYNMCTQR+P+NWSEQLY +H ETI +YLT+TVLP+LR  H++FLL E+ +RW NHKIMN+WMR FFMYLDRYYVKH+SLP+L V+G+K FK  VY+ VK DVV AM+ +I+ ER+ ++I+R L+++CVE+ E MG    + Y  D E+ LL  T+EYYARKSQEW+ETD TP YL KAE ALD E+ARV +YLN  +E KLL+V   E+LE +ET LLE+EGSGC  LLANDK  DLSRMYRLFSRVPNGL PMA +V+AHIE MG EVIN+REAR+ E GEKDSNQDP FVK LL+LHDK + VV+AQF  N+LF KALKEAFVEF N+DVGK+ NA+L+SSFCDR+LK GGEKLSD +VE +LEK V LF+YLTDKDLFAEIYRNQLAKRLLN RS+SDD E+LMIGKLK RCG+QFTGKMEGMLNDLA+GVDHQ +F + +K  KS S G                  DF+V+VLTTGYWPS+  +D  LP E+++CT+ F+ +YD KN +RRL W  +LG+A+++  FG K+YD Q +TLQA+ LL+F ++G+    SL +  ++ER+N+P E +K +LHSL+CGKYKV+ K+PA + IK TD+F V+  F C  R IR+PMA ++ESHNP RVEEDR++AIEAAIVRIMKARK L+HQQL +EVLSQLAFFRP+PKV+K+RI ALIDREYLERD +  N Y+YLA
Sbjct:    4 PKIIALEEGWNNEIKAKAIDVLEEMLNNGFDQKSQR-LFAPKEYVQTYTTCYNMCTQRSPYNWSEQLYQRHGETICDYLTKTVLPALRHQHNDFLLTELTKRWANHKIMNKWMRLFFMYLDRYYVKHHSLPTLDVAGLKHFKTLVYNEVKKDVVNAMIGLIDAERDEKLIDRGLVKNCVELLEAMGMGSLDAYVTDFEDQLLGSTKEYYARKSQEWVETDDTPTYLAKAEVALDAEKARVAHYLNSASEPKLLRVCEHEILELRETVLLEKEGSGCRALLANDKAADLSRMYRLFSRVPNGLPPMAALVRAHIEAMGNEVINRREARL-EAGEKDSNQDPAFVKELLALHDKYMAVVSAQFAGNALFQKALKEAFVEFTNRDVGKFTNAELMSSFCDRILKSGGEKLSDEDVESYLEKTVQLFSYLTDKDLFAEIYRNQLAKRLLNQRSASDDAERLMIGKLKLRCGSQFTGKMEGMLNDLAIGVDHQSDFDQTVKEDKSKSLGKL----------------DFAVQVLTTGYWPSFAAIDAHLPPEIVQCTRVFKDYYDTKNSKRRLTWMFSLGNASVKGAFGKKSYDFQVSTLQAIALLAFNADGDGAAPSLAYDAVRERINLPDEHLKRVLHSLACGKYKVITKTPAGNTIKNTDAFKVNADFKCQMRKIRVPMANLDESHNPKRVEEDRTVAIEAAIVRIMKARKTLSHQQLLAEVLSQLAFFRPNPKVIKRRIEALIDREYLERDPDVANSYRYLA 746

The following BLAST results are available for this feature:

BLAST of NO08G00120.1 vs.

BLAST of NO08G00120.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
XP_009032327.1	4.400e-274	62.81	hypothetical protein AURANDRAFT_52007 [Aureococcus...	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO08G00120	NO08G00120	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO08G00120.1	NO08G00120.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO08G00120.1.cds1	NO08G00120.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO08G00120.1.cds2	NO08G00120.1.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO08G00120.1.cds3	NO08G00120.1.cds3	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO08G00120.1.cds4	NO08G00120.1.cds4	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO08G00120.1.cds5	NO08G00120.1.cds5	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO08G00120.1.cds6	NO08G00120.1.cds6	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO08G00120.1.cds7	NO08G00120.1.cds7	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO08G00120.1.cds8	NO08G00120.1.cds8	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO08G00120.1.cds9	NO08G00120.1.cds9	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO08G00120.1.cds10	NO08G00120.1.cds10	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO08G00120.1.cds11	NO08G00120.1.cds11	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO08G00120.1.cds12	NO08G00120.1.cds12	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO08G00120.1.cds13	NO08G00120.1.cds13	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO08G00120.1.cds14	NO08G00120.1.cds14	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO08G00120.1.cds15	NO08G00120.1.cds15	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO08G00120.1.cds16	NO08G00120.1.cds16	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO08G00120.1.cds17	NO08G00120.1.cds17	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO08G00120.1.cds18	NO08G00120.1.cds18	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO08G00120.1.cds19	NO08G00120.1.cds19	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO08G00120.1.cds20	NO08G00120.1.cds20	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO08G00120.1.cds21	NO08G00120.1.cds21	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO08G00120.1.cds22	NO08G00120.1.cds22	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO08G00120.1.cds23	NO08G00120.1.cds23	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO08G00120.1.cds24	NO08G00120.1.cds24	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr8:44495..50802+
coding sequence from alignment at chr8:44495..50802+

mRNA sequence

>NO08G00120.1 ID=NO08G00120.1|Name=NO08G00120.1|organism=Nannochloropsis oceanica|type=mRNA|length=2283bp
ATGGCGGGTGCGCCTCCCCCCAACCCGGTGACGATCGAAGAAGGGTGGGA
AAAGGAGATTCTGCCCAAGGCCATCCTGCCCCTTGAAAAAATTTTGAACG
AGGGGTTGCAGGACCGGCAGAAACGCGATCTCTTCGGGCCGAGGGAGTAC
GTGCACATATACACCATCTGCTACAACATGTGCACGCAGCGCAACCCGTT
CAACTGGTCTGAGCAGCTCTATGCGAAGCACAACGAGACCATATCCAACT
ACCTGACGCAGACCGTCCTCCCGTCCCTTAGGGACCACCACAGCGAGTTC
CTCCTCGTCGAGGTCAAGCGTCGATGGGAGAATCACAAAATCATGAACGA
GTGGATGCGGAAGTTCTTTATGTACCTGGACCGGTACTACGTGAAGCACA
ACTCCCTGCCCTCCCTCCATGTGTCTGGCATCAAGTTCTTCAAGGAGCAG
GTGTACGATGTAGTCAAAGGGGACGTGGTGCGGGCCATGCTCGCGATGAT
TAACCTGGAGCGTGAGGGCCAGGTCATCGAGCGTGCCTTGATGAGAAGCT
GCGTTGAAATCTTCGAGACCATGGGCGATCAGAAAGAGTGCTACAAGGAA
GACCTGGAAGAGACGCTCCTCTCCGACACCCGTGAATACTACGCACGCAA
GTCGCAGGAGTGGATCGAAACGGACTCCACCCCCGCCTACCTCCTCAAAG
CGGAAGCCGCCCTAGATGAGGAGCGGGCCCGCGTCTTTAATTATCTCAAT
GGAGAGACGGAGGATAAGCTCCTCAAGGTGGTGATGGAGGAGTTGTTGGA
GAAGCAGGAGACGACGCTGCTGGAGCGGGAGGGGAGCGGGTGTGCCATGC
TCCTCGCTAATGACAAATACGATGACCTCTCGCGGATGTACCGCCTCTTC
TCCCGAGTCCCTAACGGCTTGCTGCCAATGGCCAAGATCGTGCAGGCCCA
TATCGAGCACATGGGTGGCGAGGTCATCAACCAACGCGAGGCCCGCATCA
ATGAGGAGGGTGAGAAGGACTCCAACCAAGACCCGAACTTTGTCAAGGCC
CTCCTGTCCCTGCACGACAAGTGCGTGGGCGTGGTGAACGCCCAATTCGA
AAAGAATTCCCTCTTCCACAAGGCGCTCAAGGAGGCCTTCGTCGAGTTTG
TGAACAAGGACGTGGGCAAGTACAAGAACGCGGACCTGCTGTCCTCCTTC
TGTGACCGGGTGCTTAAGAAGGGCGGGGAGAAGCTCAGCGACACCGAGGT
GGAGGATCACTTGGAAAAGGTGGTGAATCTGTTCACTTACCTGACGGACA
AGGATCTCTTTGCCGAGATCTACCGCAACCAGCTCGCCAAGCGCCTGCTC
AACGCACGGTCCTCATCGGACGATTGGGAGAAGCTGATGATCGGGAAGCT
CAAGCATCGGTGCGGCGCGCAGTTCACGGGCAAGATGGAAGGGATGTTGA
ACGACCTGGCCGTCGGCGTCGACCACCAGAAGGAGTTTCTCGAGCACCTC
AAGAGCAAATCATCCAGCGCCGGGGCGGCCTCGGCGGGCGTCTCTCCCCT
CGGGCCTGGGAGCAAGATGGCACCCGAGGATTTCTCAGTCAAGGTCCTGA
CCACGGGCTACTGGCCATCATATCAGCAGATGGACGTCCGACTCCCCGAT
GAGATGCTGCGCTGCACCCAGGCATTTAGGGCATGGTATGACCTCAAGAA
CCAGCGGCGGCGCCTGGCCTGGCAGCACGCCTTGGGCTCGGCCACCCTTC
GCGCCAAATTTGGCGCGAAGACGTACGACTTGCAGACCAACACGTTGCAG
GCCGTGCTCCTCCTCTCCTTCCAGTCCGAGGGCGAGTCACTGGATTTCTC
CACCCTGAAAGAACGCCTGAACGTGCCCGTGGAACAGATGAAGCCCCTCC
TCCACTCTCTGTCCTGCGGCAAGTACAAGGTGCTGAGGAAGTCCCCCGCC
TCGGACAAGATCAAAGAGACGGACTCCTTCGCGGTCCACACCGGCTTCTC
CTGCCCCCAGCGCGTCATCCGCATCCCCATGGCCACGATCGAAGAGAGCC
ACAACCCCAACAGGGTCGAGGAGGATCGCTCCATCGCCATCGAGGCCGCC
ATCGTCCGCATCATGAAGGCCCGCAAGGTCCTGACCCACCAGCAGCTCAC
CTCCGAGGTGCTTTCCCAGCTAGCCTTCTTCCGACCCAGTCCCAAGGTGG
TGAAGCAACGTATCCACGCCCTCATCGACCGGGAGTACCTGGAGCGAGAC
GAGAACCCAAATCAGTACAAGTACTTGGCGTAG

protein sequence of NO08G00120.1

>NO08G00120.1-protein ID=NO08G00120.1-protein|Name=NO08G00120.1|organism=Nannochloropsis oceanica|type=polypeptide|length=761bp
MAGAPPPNPVTIEEGWEKEILPKAILPLEKILNEGLQDRQKRDLFGPREY
VHIYTICYNMCTQRNPFNWSEQLYAKHNETISNYLTQTVLPSLRDHHSEF
LLVEVKRRWENHKIMNEWMRKFFMYLDRYYVKHNSLPSLHVSGIKFFKEQ
VYDVVKGDVVRAMLAMINLEREGQVIERALMRSCVEIFETMGDQKECYKE
DLEETLLSDTREYYARKSQEWIETDSTPAYLLKAEAALDEERARVFNYLN
GETEDKLLKVVMEELLEKQETTLLEREGSGCAMLLANDKYDDLSRMYRLF
SRVPNGLLPMAKIVQAHIEHMGGEVINQREARINEEGEKDSNQDPNFVKA
LLSLHDKCVGVVNAQFEKNSLFHKALKEAFVEFVNKDVGKYKNADLLSSF
CDRVLKKGGEKLSDTEVEDHLEKVVNLFTYLTDKDLFAEIYRNQLAKRLL
NARSSSDDWEKLMIGKLKHRCGAQFTGKMEGMLNDLAVGVDHQKEFLEHL
KSKSSSAGAASAGVSPLGPGSKMAPEDFSVKVLTTGYWPSYQQMDVRLPD
EMLRCTQAFRAWYDLKNQRRRLAWQHALGSATLRAKFGAKTYDLQTNTLQ
AVLLLSFQSEGESLDFSTLKERLNVPVEQMKPLLHSLSCGKYKVLRKSPA
SDKIKETDSFAVHTGFSCPQRVIRIPMATIEESHNPNRVEEDRSIAIEAA
IVRIMKARKVLTHQQLTSEVLSQLAFFRPSPKVVKQRIHALIDREYLERD
ENPNQYKYLA*

mRNA from alignment at chr8:44495..50802+

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO08G00120.1 ID=NO08G00120.1|Name=NO08G00120.1|organism=Nannochloropsis oceanica|type=mRNA|length=6308bp|location=Sequence derived from alignment at chr8:44495..50802+ (Nannochloropsis oceanica)
ATGGCGGGTGCGCCTCCCCCCAACCCGGTGACGATCGAAGAAGGGTGGGA
AAAGGAGATTCTGCCCAAGGCCATCCTGCCCCTTGAAAAAATTTTGAACG
AGGGGTTGCAGGACCGGCAGAAACGCGATCTCTTCGGGCCGAGGGAGTAC
GTGCACATATACACGTACGTCAGGAGGGAGCGAGAGGGAGAGGACGGAGG
ACGGGGGGGGCACGGAAGTGGGAGGAGGGGAAACGAAACCTGAGGAGCGG
AGCGTGGCGAGGTCTGTCCGACTTTTTATTTTTTTTCTGACCCTCCCTAC
TTCCCTTCCTCCTCCCCTTCCTCCTCGTGCCCTCTCTCCACCACGCCCAT
GACAGCATCTGCTACAACATGTGCACGCAGCGCAACCCGTTCAACTGGTC
TGAGCAGCTCTATGCGAAGCACAACGAGGTATGCGCCGAGGAGGGAGGGA
GGGAGGGAGGGAAGGAGGGAGAGAGGGAAGGAGGGAGGGCGGGAAAGAAG
GAGAGAGGAAAGACGAAGGCAATGAAGGAGTGCAAGATGATTCAGGAAGA
CTAGCTTTGGCTCGTCATCGACGCTCTGCCTAAATCCATCTTGTCCCTAC
ATCCCGCATAATGCAACACAACACAATAATCCACCCACCCCCCTCCCTCC
CCTCCCTCCCTCTTTCCTTAGACCATATCCAACTACCTGACGCAGACCGT
CCTCCCGTCCCTTAGGGACCACCACAGCGAGTTCCTCCTCGTCGAGGTCA
AGCGTCGATGGGAGAATCACAAAATCATGAACGAGTGGATGCGGAAGTTC
TTTATGTACCTGGTCCGTACCTCCCTCCCTCCCTCACTCCCTTCCTCCCT
TCCTCCAGAATAAGGACACACACTCATATGCTTCCCCCCCCGCCCCCTCC
CTCCATCCCTGCCTCCCTTGCGTCCTGCGACAGGACCGGTACTACGTGAA
GCACAACTCCCTGCCCTCCCTCCATGTGTCTGGCATCAAGTTCTTCAAGG
AGCAGGTAGGTAGGTAGGGAGGGAGGGAGGAGCTGGAGGGAAGGGATTGG
CGAGGAAAGAAAGGAGCCCCGTTTGTGTCTCAGAAGCTGCTGCTTCCTCT
TGGCTCCACTAACTTTCTGTCACTGACCCCCTTCCTCCCTCCCTCCCTCC
CTCCCTCCTTCCCTGCTCTTTCTCAGGTGTACGATGTAGTCAAAGGGGAC
GTGGTGCGGGCCATGCTCGCGATGATTAACCTGGAGCGTGAGGTAGGTTG
GGAGGAAGGGAGGAAGGGAGGGAGGAAAGGGGGGAGTCACCAAACACGAA
CATCATCATCTAAACGACCCACCTTTCTCTTCCTCCCTCCCTCCCTCCCT
CCCTCCCTCCCTCCCTCCCTCCCTCCCTCAGGGCCAGGTCATCGAGCGTG
CCTTGATGAGAAGCTGCGTTGAAATCTTCGAGACCATGGGCGATCAGAAA
GAGTGGTAGGTGGCACCTCCCTCCCTCCCTCCCTCCTTCCTTCCTTCCCT
CCTTTTCTGCCTCCCTCCCTCCCTCGTTCCGACACTCTTCGGCCTGCTTT
GTTGCTCCCTTGCTGTCGAAAATCAAAGAGAACACGACTAACCCCATCCC
ACCCCTCTCCTTCCTCCCTCTTCCCCTCCCTCCCTCCCTCCCTCCCTCCC
TCCCTCCCTCCCTTCCCCCCTCCCTCCCTTTCTCCCGCCAGCTACAAGGA
AGACCTGGAAGAGACGCTCCTCTCCGACACCCGTGAATACTACGCACGCA
AGTCGCAGGAGTGGATCGAAACGGACTCCACCCCCGCCTACCTCCTCAAA
GTGCGCCCCCATCCCTCCCCCCTCCCTTCCTCCCTCCCTCCCTCCCTCCT
TCTTGTCGTTCCTGAGACTGTAATCTTTGTTCCCGGTCGCTAAGTCCCCT
CCTTCTCTCCCCCTTGCCTCCCCCCCCTCCCTCCCTGCTCGTCGATGCAG
GCGGAAGCCGCCCTAGATGAGGAGCGGGCCCGCGTCTTTAATTATCTCAA
TGGAGAGACGGAGGATAAGCTCCTCAAGGTAGGGAGGGACATTAGGGAGG
AATAATAGGGAGGGATATTAGGGGGGGACATTAGGGGGGGATATTAGGGA
GGGAAAGAGAACAGAGGGGAGGTTTTCTTCTCTCATGATTCTGCCAAGGG
CGCGACTAAGCATGCAGGAATATCACGCTCATCCCTCCCTCCTTCCCCCC
CTCCCTCCCTCCTTCGTTGCCTGGGCAGGTGGTGATGGAGGAGTTGTTGG
AGAAGCAGGAGACGACGCTGCTGGAGCGGGAGGGGAGCGGGTGTGCCATG
CTCCTCGCTAATGACAAATACGATGGTAGGGAGGGAGGGACGGAGGGTGG
GAAGGAGTGATGGAGGGAAGGAAGGAGGGAGGGAAGGAGGTCCGAATCGC
GCTTCACCCCCCCCAACCCACCCACCCTCCCCTCCCTCCTTTCTCCCTCC
CTCCCTCCCTTCCTCCCTCTAGACCTCTCGCGGATGTACCGCCTCTTCTC
CCGAGTCCCTAACGGCTTGCTGCCAATGGCCAAGATCGTGCAGGCCCATA
TCGAGCACATGGGTGGCGAGGTCATCAACCAACGCGAGGCCCGCATCAAT
GTATGTCCTCCCTCCCTCCCTCCCTCCCTTCCTCCCGCCTTCGCTCTCCT
TGTCCACGCACCTTTTTCTTCCCCCCTTGGACCTGACATTAAAAACCTCC
CCTCGACTCCGACCTCCCAACCCCGATAGGAGGAGGGTGAGAAGGACTCC
AACCAAGACCCGAACTTTGTCAAGGTAAGCCAGCCCTCCCTCCCTCCCTC
CCTCCCTCCCTCCCTCCCTCCCTCCCTGTCCATCCAGCGCCCCCCTCCCC
CCCTTGCGAGGTACCTCCATCTCACTCTGCCCTCCCTCCCTCCCTCCCTC
CCTTCCTTCCCCCAAGGCCCTCCTGTCCCTGCACGACAAGTGCGTGGGCG
TGGTGAACGCCCAATTCGAAAAGAATTCCCTCTTCCACAAGGCGCTCAAG
GAGGCCTTCGTCGAGTTTGTGAACAAGGTACGTCTTCCCTCCCTCTCTCC
CTCCCTCCCTCCCTCCTTTCCTCCCTCCTTCCCCTCCCCTCGTCCTTCCT
CCCCTCCTTATTCTTTTGTCTCGCTTCCTTTGCCCGGCTTCCATTCATTC
TCCCTCCGTCCCTCCGTCCCTCCGTCCCTCCCTTCCGCAGGACGTGGGCA
AGTACAAGAACGCGGACCTGCTGTCCTCCTTCTGTGACCGGGTGCTTAAG
AAGGGCGGGGAGAAGCTCAGCGACACCGAGGTGGAGGATCACTTGGAAAA
GGTAGGGGTGGGAGGAGGGTGGGAGGGTGGCGGTGGCGGACGGCAAATCT
CCTCCCTCATGCGTCTCATGTCCCGAGAACTCTTACTTTATCCGTTATCC
TGCTCACCAACGCCCCCTTCCTCCCTCCCTCACCACCTCCCTTTCCAGGT
GGTGAATCTGTTCACTTACCTGACGGACAAGGATCTCTTTGCCGAGATCT
ACCGCAACCAGCTCGCCAAGCGCCTGCTCAACGCACGGTACGCCCCTCCC
TCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCTTCACCGACGCCAACTTTT
TTTCTCCCGCCCTCCCCCCCCCTCTGCCTCCCTCCCTCGCTGTTCCAGGT
CCTCATCGGACGATTGGGAGAAGCTGATGATCGGGAAGCTCAAGCATCGG
TGCGGCGCGCAGTTCACGGGCAAGGTAGGGAGGGAGGGAGGAAGGGAGGG
AGGGAAGAGCTGCATGAGGCTGTCAATCTTCCAGAGGAATCCCTCGGGTT
TTTTCTTATCTCTTTTTCCTTCCTTGTCTCCCTCCCTCCCTCCCTCCCTC
CCTCCCTCCTTCCCTCCCTAGATGGAAGGGATGTTGAACGACCTGGCCGT
CGGCGTCGACCACCAGAAGGAGTTTCTCGAGCACCTCAAGGTACGATCTT
CCTCCTTCCTTTTCTCCCTTCCTCTCTCCCTCCCTCCCTCCCCCCTCAAA
ACAAGTCAAAGCCATCCGGCTTCTGCAGACCTCACCTTCAACCCCTGGAC
CTAACTCAACATGGACTCACCTCCCTCCCTCCCTCCCTCCCTCCCTCCCT
CCCTTCCCCCCTCAGAGCAAATCATCCAGCGCCGGGGCGGCCTCGGCGGG
CGTCTCTCCCCTCGGGCCTGGGAGCAAGATGGCACCCGAGGATTTCTCAG
TCAAGGTCCTGACCACGGGCTACTGGCCATCATATCAGCAGGTAGGGAGG
GAGGGAGGGAGGGACGAAGGGAGGGAGGGAGGGAAGAGTCTCTGAATGTA
ACTTTCCCCCCCCTACACTTCCCTCCTCCCCACCCCCCGCCCACCCACAC
GCACCTCCTCGCTCTCACCTAGCCCCCAAACTCTTACATCCACCCACTCT
CCGCGCAACACACCCACCCACCCACATATCCGTCCATCCATCCACCCGCC
CACCCACACGCACCCTACACACATGCAGATGGACGTCCGACTCCCCGATG
AGATGCTGCGCTGCACCCAGGTACCTCCCTCCTTCCCTCCCTCCCTCCTT
CCCTCCCCCTTCAATCACCCCTTCCCCCCGTCCCTCCATCCGTCCCTCTT
CCCCTCCGCAGGCATTTAGGGCATGGTATGACCTCAAGAACCAGCGGCGG
CGCCTGGCCTGGCAGCACGCCTTGGGCTCGGCCACCCTTCGCGCCAAATT
TGGCGCGAAGACGTACGACTTGCAGACCAACACGTTGCAGGTAGAGAGGG
AAGGAGGGGAAGGAAGGAGGGGAAGGAAGGAGGGATGGAGAGTCGATCGA
AGTTGAGAAGTAGAATCTAATCAATATGTCCATCCATCCCGCCCTCCCTC
GGTACCTCCTTCCCTCCGTCCCTCCCTTCCAGGCCGTGCTCCTCCTCTCC
TTCCAGTCCGAGGGCGAGTCACTGGATTTCTCCACCCTGAAAGAACGCCT
GAACGTGCCCGTGGAACAGATGAAGCCCCTCCTCCACTCTCTGTCCTGCG
GCAAGTACAAGGTATGACGCTAGATGGGGAGGGAGCGAGGGAAGGCGGGA
GGAATTGACTCGGGCTCGTCTCTCCTGAAATGATAGCTCTTATTGAATTG
CACGGGATTTGGTCACGAAACTTTGGACTCTGGTAGGAATGACGACCCTC
CTGCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCCCCTTCTCCTCAGGTG
CTGAGGAAGTCCCCCGCCTCGGACAAGATCAAAGAGACGGACTCCTTCGC
GGTCCACACCGGCTTCTCCTGCCCCCAGCGCGTCATCCGCATCCCCATGG
CCACGATCGAAGAGAGCCACAACCCCAACAGGGTCGAGGTAGGGAGGGAG
GGAGGGAGGGAGGGAGGGAGGGTACCGTAGGAGTAGCAGTCTGCTTTTTC
CGTGTAGTGCTGGCCACGGAAGACTTCGGGCGCGAGGTAGTAGGCGTTGC
CCGTGCACTGGGTCATGAAGCTGAGGGAGGGAGGGAAGGAAGGAGGGAGG
ACACAGGAGGTGCCTGCAAAGTTTTCCTGGGCTTGGCTTTTGTTACCATC
CCTTGTTCTCTCCTTTCACTCTCTCATTCTCATCCTCATTTCCCCTTGAC
TCTCATGTTTCTTTATCACTCTTGTTGTTATAGGAGGATCGCTCCATCGC
CATCGAGGCCGCCATCGTCCGCATCATGAAGGCCCGCAAGGTACGTCATA
CTCCCTCCCTTCCTCCCTCCCTCCCTCCCTGCCTCCACCCCTTTCGCTTC
CTCTATTCTGCGAGGCTTCCTGTCTGATTTCTCTCTCGCTCAGACACACC
CTTCTCTCGCCATCTTCATGACCCTTTTTCCTTCCTCGGACTTTTCCCCC
AACCACCTTCCAAACTCCCTCCCATCTCCTCTCCTCCCCTCCCTCCCTCT
CGCCCTCCCTCCCCAGGTCCTGACCCACCAGCAGCTCACCTCCGAGGTGC
TTTCCCAGCTAGCCTTCTTCCGACCCAGTCCCAAGGTGGTGAAGCAACGT
ATCCACGCCCTCATCGACCGGTACGTCAAATCAAGTCACTCGGGGAGGGG
GATGCTTTTCGGGATCAAGGGATAAGTGGGGGGAGTCTTCGAATTACTCC
GATTTTCGAAAGTTGGTAAATCAAAGTCTATCCGCCCTCGCTGATGGATT
GAAAGGGAAGGAGGGTTGGAGGGTTGGAGGGAAGGAGGAACGGGAGGCAA
TTTACTCACTTCTTTCCCCCCCGTCCATTTTTCCTCCATTCCTCCCGAAT
AAATAGGGAGTACCTGGAGCGAGACGAGAACCCAAATCAGTACAAGTACT
TGGCGTAG

Coding sequence (CDS) from alignment at chr8:44495..50802+

>NO08G00120.1 ID=NO08G00120.1|Name=NO08G00120.1|organism=Nannochloropsis oceanica|type=CDS|length=2283bp|location=Sequence derived from alignment at chr8:44495..50802+ (Nannochloropsis oceanica)
ATGGCGGGTGCGCCTCCCCCCAACCCGGTGACGATCGAAGAAGGGTGGGA
AAAGGAGATTCTGCCCAAGGCCATCCTGCCCCTTGAAAAAATTTTGAACG
AGGGGTTGCAGGACCGGCAGAAACGCGATCTCTTCGGGCCGAGGGAGTAC
GTGCACATATACACCATCTGCTACAACATGTGCACGCAGCGCAACCCGTT
CAACTGGTCTGAGCAGCTCTATGCGAAGCACAACGAGACCATATCCAACT
ACCTGACGCAGACCGTCCTCCCGTCCCTTAGGGACCACCACAGCGAGTTC
CTCCTCGTCGAGGTCAAGCGTCGATGGGAGAATCACAAAATCATGAACGA
GTGGATGCGGAAGTTCTTTATGTACCTGGACCGGTACTACGTGAAGCACA
ACTCCCTGCCCTCCCTCCATGTGTCTGGCATCAAGTTCTTCAAGGAGCAG
GTGTACGATGTAGTCAAAGGGGACGTGGTGCGGGCCATGCTCGCGATGAT
TAACCTGGAGCGTGAGGGCCAGGTCATCGAGCGTGCCTTGATGAGAAGCT
GCGTTGAAATCTTCGAGACCATGGGCGATCAGAAAGAGTGCTACAAGGAA
GACCTGGAAGAGACGCTCCTCTCCGACACCCGTGAATACTACGCACGCAA
GTCGCAGGAGTGGATCGAAACGGACTCCACCCCCGCCTACCTCCTCAAAG
CGGAAGCCGCCCTAGATGAGGAGCGGGCCCGCGTCTTTAATTATCTCAAT
GGAGAGACGGAGGATAAGCTCCTCAAGGTGGTGATGGAGGAGTTGTTGGA
GAAGCAGGAGACGACGCTGCTGGAGCGGGAGGGGAGCGGGTGTGCCATGC
TCCTCGCTAATGACAAATACGATGACCTCTCGCGGATGTACCGCCTCTTC
TCCCGAGTCCCTAACGGCTTGCTGCCAATGGCCAAGATCGTGCAGGCCCA
TATCGAGCACATGGGTGGCGAGGTCATCAACCAACGCGAGGCCCGCATCA
ATGAGGAGGGTGAGAAGGACTCCAACCAAGACCCGAACTTTGTCAAGGCC
CTCCTGTCCCTGCACGACAAGTGCGTGGGCGTGGTGAACGCCCAATTCGA
AAAGAATTCCCTCTTCCACAAGGCGCTCAAGGAGGCCTTCGTCGAGTTTG
TGAACAAGGACGTGGGCAAGTACAAGAACGCGGACCTGCTGTCCTCCTTC
TGTGACCGGGTGCTTAAGAAGGGCGGGGAGAAGCTCAGCGACACCGAGGT
GGAGGATCACTTGGAAAAGGTGGTGAATCTGTTCACTTACCTGACGGACA
AGGATCTCTTTGCCGAGATCTACCGCAACCAGCTCGCCAAGCGCCTGCTC
AACGCACGGTCCTCATCGGACGATTGGGAGAAGCTGATGATCGGGAAGCT
CAAGCATCGGTGCGGCGCGCAGTTCACGGGCAAGATGGAAGGGATGTTGA
ACGACCTGGCCGTCGGCGTCGACCACCAGAAGGAGTTTCTCGAGCACCTC
AAGAGCAAATCATCCAGCGCCGGGGCGGCCTCGGCGGGCGTCTCTCCCCT
CGGGCCTGGGAGCAAGATGGCACCCGAGGATTTCTCAGTCAAGGTCCTGA
CCACGGGCTACTGGCCATCATATCAGCAGATGGACGTCCGACTCCCCGAT
GAGATGCTGCGCTGCACCCAGGCATTTAGGGCATGGTATGACCTCAAGAA
CCAGCGGCGGCGCCTGGCCTGGCAGCACGCCTTGGGCTCGGCCACCCTTC
GCGCCAAATTTGGCGCGAAGACGTACGACTTGCAGACCAACACGTTGCAG
GCCGTGCTCCTCCTCTCCTTCCAGTCCGAGGGCGAGTCACTGGATTTCTC
CACCCTGAAAGAACGCCTGAACGTGCCCGTGGAACAGATGAAGCCCCTCC
TCCACTCTCTGTCCTGCGGCAAGTACAAGGTGCTGAGGAAGTCCCCCGCC
TCGGACAAGATCAAAGAGACGGACTCCTTCGCGGTCCACACCGGCTTCTC
CTGCCCCCAGCGCGTCATCCGCATCCCCATGGCCACGATCGAAGAGAGCC
ACAACCCCAACAGGGTCGAGGAGGATCGCTCCATCGCCATCGAGGCCGCC
ATCGTCCGCATCATGAAGGCCCGCAAGGTCCTGACCCACCAGCAGCTCAC
CTCCGAGGTGCTTTCCCAGCTAGCCTTCTTCCGACCCAGTCCCAAGGTGG
TGAAGCAACGTATCCACGCCCTCATCGACCGGGAGTACCTGGAGCGAGAC
GAGAACCCAAATCAGTACAAGTACTTGGCGTAG

Synonyms

Publications