NO08G00090.1, NO08G00090.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO08G00090.1
Unique NameNO08G00090.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length5344
Alignment locationchr8:34273..39616 +

Link to JBrowse

Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr8genomechr8:34273..39616 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
BLAST of NO08G00090.1 vs.
Match: EWM26479.1 (mitogen-activated protein kinase kinase 2 [Nannochloropsis gaditana])

HSP 1 Score: 752.7 bits (1942), Expect = 2.300e-213
Identity = 621/1470 (42.24%), Postives = 798/1470 (54.29%), Query Frame = 0
Query:   87 STSSSSSTIQSEGATSPVSTPPLKMSSLRSLFSRPLIGSKMQLGISTGIDKQPVTVASVATIGEDDEVCVLSPSAATFLSPSHSETLSPNSP---YPASPTIPMTTTRTTAMPSKAGMTSIIALSMQHQWSLLSRPQSWRISSPLSSPGTLHIADSLHLSPSQPKPHHEQQQQGQLQQRQLPESGGEGSSSPPSSLLSPLEQLQQQLYPQRLFAFTGVPSPLHRASNHA-----SRSNLSGNGAACP-SSPSFSSITPSASACPSSPMPSPLRNVAPASAPVSTARTLAAEAAATK-TTTTTTTAPPTPNHSLSSRPRLALPQA--SRRPISIKIDAGPGPSPPTS-PYHHEDDEDGRGVEGRRPSVPASAHLRPSASTNSLLHQH-YHPHKQQQHHFAEDGSIRLGGFDIGIGGLSPSPSENDISGLLLSSLSCLTAP---SGSHMEGGSAGGRDKSSSSSACSSNSSSSSSMSPSRQHVSQRLSIHANATSRGGGGGKGGGGKGGMGGLGGVVGDGCSNNLVVVGKLGRGNGGTVMKAIYLPTMRPVALKSVHLYNPERRQQMVQELSMLYSNLADINFEEEEGEGDRGMEENDEE--GGTKTMEEIVSKRERVAVKPEEEERRRKGHRRGWSGGGGGDCISIADTCMERGSFSSFRDSSWRADSLDDGSGSSNGGALGSGVRASISSSMEKEKKKEDTAVALPVIATTTCVTSLSPASIFIDCHAPLPPSLSTDAPSGSSSSFARDKRAVSAPALPTFTRGRPVPLSELQPVTPPRRQPMCSIAGDDEAEKVEEVKGESPVVPRPSVIAQQPTVVPQADIHRFEAPSSHLHCSAASIDELSP-ESSTTVAPSTPRATPALAPICPLPSPQAPHSPSMDKSSDSCSRSPSKFTLPSSGAR-----GVGSQLRLTINEAVTDTVSQACPFIVSFYDVFADPARGTVNLLVEYMDGGSLEDLVKAGGCDDEVVLANMAKCILLGLNYLHERQKIHRDIKPGNLLMNTKGVVKIADFGVSRNLTGTSDLSKTFVGTVGYMSPERIQGHKYNAKADIWSFGLSLLACALGVFPYERQVSSLSYFEMVNAVCDEPSPELPPGDERFGSELRDFVRLCLLKDPADRPSAEKLLFHPFLQQYGGAGGVSLQGFGTGASSRP-RITAGGVIAAATIKSLKVKQAELHQIADALALHYERRRLSDRRQSTASLSASVSTSGYVLGGSISGTGESVSGSTLTPHLPAPPIPTSHGCIQMAYISVGQIHKLAENLQLDEKYVSRILHNKLQDLVIFPTKEQEPWVSG--GSERANVTSSYVGGHMQQSLSSSSISASGSVSGQPWPPLVVRRASSLMRQRTGVSQVSPDIEEERSYRIERQQLFQGISGTSSGKISEEMGEPYLPPSPMKKRAMTLMMMATTNHQVTSSGG----GCIYRRDSMDSGSATWGTKPLVLVPAEEKIQWQRQRVASGCCIM 1525
            STS SSS + S     P      K  +LR L  +    S+ +   +   DK  ++V   A     D V  L+ S AT  SPS S ++  +S    +P SP       +      K G+TSIIALSMQHQWSLLSRPQ  +++SPLSSPGTLH+AD L LSP+Q             + R L E+         S  LSP   L+Q     RLFAF  VPSPLHRAS HA     S+S  S    A P SSP   S+  S  +  S+P    +     A +  +++ T  + +A T      ++ +P +P HS +  PR +  Q   SRRP+SI++D     +PP S P+H  +  D   V+G++P+ P+S ++   AS +    QH +HP   +QHHF EDGS+RLGGF+IG+GGLSPSPSE++ SG       C  AP   SG   +   A G DK  +     S         PS+  +S R S   +     GGG + GG +           DGCSNNLVVVG+LGRGNGGTVMKA+YLPTMR VALKSVHL++PE+RQQMVQEL MLYSNLADINF++E      G EE +E+   G          +    ++  EE++++K HRRG S G   D         E G  S F + +             N   +G+        +  K K    T  A P     +    L  +  F D    + P      PS ++ S      A+  P  P+      +P +    +    +Q M +    +            P +  P     QPT           A   +L   +   D L P ES      S+P           LP    P SP + K+  S S     F   S   R      VGSQ+R+ +NE      SQ CP+IVSFYDVFADP RGTVNLLVEYMDGGSLEDLV+AGGCDDE VLANMA+ IL+GLNYLHERQKIHRDIKPGNLLMNTKGVVKIADFGVSRNLTGTSDLSKTFVGTVGYMSPERIQGHKYNAKAD+WSFGLSLLACALG FPYERQVSSLSYFE+VNAVCDEPSPELPPGD RF  E RDF+RLCLLK+P++RPSAE LLFHP+++++ G   +S +G       RP +  +G  +A   IKSLKVK+AELHQIADALA+H+ERRR S R +S  S S S ST+G+V+    +G     SG+    +LP   +        M +++  QI +LAE L L+E YV   LH KL  LV+FP KE +  + G  G+   N+T   + GH  +S SS S+SA  S+SG+   P++VRRASSL+RQ T    V  D +E+RS           +    +G  ++            +KR+  L M+ + +H + S            R S DS +   G  PLV   +E       Q +  GCC++
Sbjct:   13 STSLSSSGLSSGSCDRPGQAAGRKKPNLRLLLPK----SQRERHANLDNDKASLSVVVPAA----DSVGCLTSSPAT--SPSWSSSVKQSSSPSFHPFSPPRYKNDKQPLEQSGKKGLTSIIALSMQHQWSLLSRPQC-KVASPLSSPGTLHVADGLRLSPNQ-------------RFRWLDEN---------SVTLSP-SHLRQHKQSHRLFAFAHVPSPLHRASGHAIGSPQSKSPQSSPACAPPHSSPISQSLFRSLPSFRSAPRAIFISEKQSAGSTTTSSSTNCSGSAITSFAPLPSSMSPSSPFHSPAPSPRQSSSQKQLSRRPMSIRVD-----NPPASGPFHACNTSDKDDVDGQQPT-PSSPNVGSPASPS----QHSFHPD-HRQHHFTEDGSVRLGGFEIGVGGLSPSPSESNFSG-------CHFAPHSSSGLSSQISFARGEDKGKNGGYGGS---------PSQAKMSHRFSGGCSGLRVLGGGNEKGGSRLSTCS----TEDGCSNNLVVVGRLGRGNGGTVMKAVYLPTMRLVALKSVHLHHPEKRQQMVQELGMLYSNLADINFKDE------GEEEAEEDIVAGETIQSAAEGTQSFGTIRKAEEKKKKKSHRRGNSMGLSMDA-------GEFGGVSPFTEGN-----------EGNESPIGASPEDLDDRNDVKRKDSSLTETAAPQPLYVSTGDELCTSKEFTD-RIKVDPQNLRPRPSFNAKS------ALFPP--PSLAINASIPSACTSKMRRHNKQAMSAPVQSNFTRGRLAFSPLQPAIQLPF----QPT-----------ATFGNLAVKSDQQDGLKPRESGEDAGISSPTTFKIEDRQIKLP----PGSP-ISKTLTSPSTDVLHFMASSGHVRDRKLPAVGSQVRMALNENAAQAASQTCPYIVSFYDVFADPVRGTVNLLVEYMDGGSLEDLVRAGGCDDEAVLANMARNILVGLNYLHERQKIHRDIKPGNLLMNTKGVVKIADFGVSRNLTGTSDLSKTFVGTVGYMSPERIQGHKYNAKADVWSFGLSLLACALGAFPYERQVSSLSYFELVNAVCDEPSPELPPGDRRFSPEFRDFLRLCLLKNPSERPSAENLLFHPYVRKHTGGEWLSKEG------ERPVKTDSGSPMATTAIKSLKVKRAELHQIADALAVHFERRRRSSRLESIGSASTSGSTTGHVMSAISNGASRGGSGNLGACNLPFSSLHL------MDHVTPSQIRRLAETLHLEEAYVKETLHIKLCGLVMFPDKELDIALQGDRGTGGGNMTGGEISGHASRSTSSLSVSA-WSLSGRSLHPMLVRRASSLIRQDTCGITVHDD-DEQRSNLSNSSSYSSLLLSRKNGVATKSKASNLY----SEKRSAKLNMLTSNDHILASKASDDNDDIKGLRGSEDSTAVVQGDLPLVTSSSE----GVNQSLTRGCCVV 1342          
The following BLAST results are available for this feature:
BLAST of NO08G00090.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1
Match NameE-valueIdentityDescription
EWM26479.12.300e-21342.24mitogen-activated protein kinase kinase 2 [Nannoch... [more]
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO08G00090NO08G00090Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO08G00090.1NO08G00090.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO08G00090.1.cds1NO08G00090.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO08G00090.1 ID=NO08G00090.1|Name=NO08G00090.1|organism=Nannochloropsis oceanica|type=mRNA|length=5344bp
TTTCCGTTGGTCGAACAGGCACGCCACCTTCGAGCCCCTCGAAGACGGCC
AAAGGATGAGGTCGAGATGTCAGGAATGAGTCATTGGGAGAATAGATTTA
AGTGTTGCATAAATATCTGAGCATGTGATGGCCAACTCATGGCTGTACTT
GCAGCTTACAGCGGCTGTTTCCCATAGCTACGCCATCTCGATTCTTTGCG
CTCCCTGCCCTCATTCGTTCACTCCCAGCAATCACAATCTTCCCTTGCTT
ACAGGTTTACTACTGCTCCAAAATTTACATTTACACACTAGCACACATGT
ACATGCACACGCACCCACCCTTCCACCACAGCTTGCCCATTCTGCATCGT
CGAGACGCAAACAGCAGGCCACGCCCCACAGAAAACCCCTTCTCCATAGG
ATTTCACTCGAGGTCCAGTTTAATATACCCCGGGCCTTGGGGTAAATGCT
CTTGGCACGAATATAGGACCCCACGTAACATAAAAACGATGCAGCGAGTA
CAGTCCACGTTGGGCTTGGGGGTGACGCACTCCACAGCTCCTTCCCATCT
GTCGTCCACCTCGTCGTCATCCTCGACAATTCAGTCGGAAGGGGCAACTT
CCCCTGTTTCGACGCCTCCTCTTAAAATGTCAAGCCTGCGCTCTCTCTTT
TCCAGACCACTTATCGGCTCGAAGATGCAGCTCGGCATCAGTACTGGCAT
TGACAAGCAGCCCGTCACTGTCGCTTCCGTTGCGACCATTGGAGAGGACG
ACGAAGTGTGCGTCCTCTCTCCATCCGCTGCCACATTTCTCTCGCCTTCG
CACTCTGAGACATTGTCTCCTAATTCTCCCTACCCTGCTTCACCAACCAT
CCCCATGACGACCACCCGTACCACGGCAATGCCATCTAAGGCGGGCATGA
CCTCGATCATCGCCCTCTCCATGCAGCATCAATGGTCCCTACTTTCACGG
CCCCAGTCCTGGCGCATCTCCAGCCCCTTATCATCTCCCGGCACCTTGCA
TATTGCGGACAGCCTTCACCTTTCCCCCAGCCAACCAAAACCGCACCATG
AGCAACAGCAGCAGGGACAGCTGCAGCAGCGGCAGCTTCCGGAAAGCGGC
GGAGAAGGCAGTAGCAGCCCTCCTTCATCGTTGTTGAGTCCTTTGGAGCA
ACTACAGCAGCAACTTTACCCTCAGCGTCTGTTTGCCTTTACTGGCGTTC
CATCTCCTCTTCATCGTGCCAGCAACCACGCGAGTCGTTCCAACCTCAGC
GGAAATGGTGCGGCTTGTCCATCATCACCATCATTCTCATCCATAACACC
GTCAGCATCGGCGTGTCCGTCATCGCCCATGCCCTCCCCTCTTCGAAATG
TAGCGCCAGCATCTGCGCCAGTATCGACAGCTAGGACGTTAGCAGCAGAA
GCTGCAGCAACAAAAACAACAACAACTACAACAACAGCCCCTCCGACCCC
TAATCATTCCCTCTCTTCGCGGCCACGCCTCGCCCTACCCCAGGCCTCTC
GCCGCCCCATATCCATCAAAATCGACGCCGGCCCTGGCCCTAGCCCGCCC
ACCTCTCCCTATCACCATGAAGATGATGAAGATGGAAGGGGAGTTGAAGG
ACGTAGGCCCTCCGTTCCTGCCTCCGCGCACCTTCGGCCTTCTGCCTCGA
CCAACTCCCTCCTTCACCAGCACTACCACCCTCACAAGCAACAACAGCAC
CACTTCGCTGAGGACGGAAGCATACGTCTCGGAGGGTTCGACATAGGCAT
TGGTGGGCTCAGCCCCTCCCCTTCCGAAAACGACATTTCGGGCCTTCTCC
TCTCCTCACTCTCCTGCCTCACAGCTCCCTCCGGCAGCCACATGGAGGGA
GGGAGTGCGGGCGGAAGGGATAAGAGCAGTAGCAGCTCCGCGTGCAGCAG
CAACAGCAGCAGCAGCAGCAGCATGAGTCCATCACGACAACACGTGTCCC
AGCGACTGAGCATCCACGCCAATGCCACGAGTAGAGGAGGAGGAGGAGGG
AAGGGAGGTGGAGGAAAAGGAGGAATGGGAGGCTTGGGAGGGGTAGTGGG
GGATGGGTGCTCGAATAATTTGGTGGTGGTGGGGAAGCTTGGAAGAGGAA
ATGGAGGGACAGTGATGAAGGCAATTTACTTACCGACGATGAGGCCGGTG
GCTTTAAAGAGCGTCCACCTCTACAATCCCGAGAGGCGCCAGCAGATGGT
GCAGGAGCTGAGCATGCTTTATTCGAATCTGGCGGATATTAACTTTGAGG
AAGAGGAGGGGGAGGGAGACAGAGGAATGGAAGAGAATGATGAGGAAGGG
GGGACGAAGACGATGGAAGAGATCGTGAGCAAGAGAGAGCGGGTGGCTGT
CAAGCCGGAAGAGGAGGAGAGGAGGAGAAAGGGCCACCGTCGAGGTTGGT
CTGGCGGCGGAGGCGGGGACTGCATCAGTATTGCTGACACTTGTATGGAG
CGCGGGTCTTTTTCGTCCTTCCGCGACTCGTCTTGGAGAGCTGATTCTCT
TGACGACGGAAGCGGGAGCAGTAACGGCGGAGCGCTTGGGAGCGGCGTGC
GGGCGTCAATTTCCTCTTCCATGGAGAAGGAGAAAAAGAAGGAGGACACT
GCTGTTGCATTGCCAGTGATTGCCACCACTACGTGCGTCACATCTTTGTC
TCCCGCCAGTATATTCATCGATTGCCACGCCCCCCTACCCCCTTCCCTCT
CTACCGATGCACCCTCCGGCTCTTCCTCCTCCTTCGCGCGGGACAAGCGG
GCAGTCTCGGCTCCGGCGTTGCCCACATTCACGCGCGGCCGACCTGTTCC
CTTGTCGGAACTTCAGCCAGTCACTCCTCCTCGTCGTCAACCCATGTGCT
CAATTGCAGGCGATGACGAAGCCGAAAAGGTAGAGGAGGTGAAGGGAGAG
AGCCCGGTTGTGCCTCGTCCTTCCGTTATTGCTCAGCAGCCGACAGTGGT
GCCACAAGCCGATATACATCGCTTTGAAGCACCATCCTCCCATTTGCATT
GCTCAGCAGCAAGCATTGACGAATTGAGTCCTGAGAGCAGCACCACAGTT
GCGCCGAGTACCCCGCGCGCGACCCCTGCCCTAGCTCCGATTTGTCCTCT
GCCATCCCCACAAGCTCCTCACTCCCCTTCTATGGACAAATCCAGTGACA
GCTGCAGCAGGAGCCCCAGTAAGTTCACCCTGCCCAGTAGTGGTGCCCGC
GGCGTAGGCTCACAGTTGCGGCTGACCATTAACGAGGCAGTGACCGATAC
CGTGTCGCAAGCCTGTCCCTTCATCGTCTCATTCTACGATGTTTTTGCGG
ATCCAGCTCGCGGTACCGTCAACCTGCTAGTTGAGTACATGGACGGCGGC
TCCCTCGAGGACCTGGTTAAAGCAGGTGGGTGCGATGACGAGGTTGTGCT
GGCGAACATGGCAAAATGCATCTTGCTGGGCCTTAATTACCTGCACGAGC
GACAAAAGATCCACCGGGATATCAAACCGGGTAACCTGCTCATGAACACA
AAAGGTGTTGTCAAAATCGCCGACTTTGGCGTGTCACGGAACCTGACAGG
GACTTCGGACCTATCTAAGACGTTTGTGGGCACGGTAGGGTACATGAGTC
CGGAGCGGATCCAGGGACACAAGTACAATGCCAAGGCCGATATATGGAGC
TTCGGCTTGAGCTTGCTGGCATGTGCTCTGGGTGTATTCCCGTACGAGCG
TCAAGTCTCTTCGCTAAGCTATTTTGAGATGGTGAATGCCGTTTGTGATG
AGCCCAGCCCAGAGCTGCCGCCTGGGGACGAACGCTTCGGATCCGAGTTA
CGTGACTTTGTGCGATTGTGTCTTCTCAAGGACCCCGCGGACCGGCCTTC
AGCGGAAAAACTCCTGTTTCATCCTTTTTTACAACAATATGGTGGTGCAG
GTGGAGTGTCGCTGCAGGGATTTGGGACAGGTGCGTCAAGTCGGCCCCGG
ATTACTGCCGGTGGGGTGATTGCAGCTGCGACAATCAAGTCTCTCAAAGT
CAAACAAGCGGAGCTTCACCAAATAGCGGACGCTCTGGCACTGCACTACG
AACGCCGGCGTCTTTCTGATCGCAGGCAGAGCACAGCTTCACTCTCAGCC
TCGGTGTCGACCAGTGGCTATGTTTTGGGCGGTAGTATCAGTGGGACTGG
TGAAAGCGTGAGTGGAAGTACCTTAACGCCTCACTTACCTGCTCCCCCTA
TCCCCACTTCTCACGGATGCATTCAAATGGCTTACATCAGCGTCGGTCAG
ATCCACAAGCTGGCGGAGAATCTGCAGCTAGATGAGAAGTACGTAAGCCG
GATACTTCACAACAAGCTCCAGGACCTGGTCATATTTCCGACAAAGGAGC
AGGAGCCATGGGTATCGGGAGGCAGCGAAAGGGCGAATGTGACGTCAAGC
TATGTTGGAGGGCATATGCAGCAGTCCTTATCGTCCTCGTCCATCTCCGC
GTCCGGTTCCGTCTCGGGCCAGCCGTGGCCTCCCTTGGTCGTGAGACGCG
CGTCATCATTGATGAGGCAACGCACCGGGGTAAGCCAAGTATCACCAGAT
ATCGAGGAAGAGAGGTCCTATCGGATCGAGCGACAGCAGCTGTTTCAGGG
TATATCGGGGACATCATCTGGCAAGATTTCCGAAGAGATGGGGGAGCCGT
ACTTGCCGCCCTCTCCTATGAAGAAGAGGGCCATGACATTGATGATGATG
GCCACCACCAATCATCAAGTGACCAGCAGCGGTGGCGGCTGTATTTATCG
TAGGGATAGCATGGACAGCGGGTCAGCAACGTGGGGCACCAAACCCCTGG
TGCTGGTGCCTGCCGAAGAAAAGATTCAGTGGCAGCGGCAGCGGGTGGCT
TCGGGCTGTTGCATAATGTGTTAAATTCGTCGTGTAGATAAGAATAGGTT
TGGAGATCCTAGAATGATAAATAGATAGTATGCGTTTGCCGAAGTCAAGA
GGAGTGAAGGAAATACGAGAGGAAGAAGGAATGGCGAGGAGAAGAGGACA
GACCCCTCGACTCTAAATCGACATTAATAGTGATTCACCGTTAAAATATC
TCAGCTGTGGATTGGTTTAAAGATTTTATCGCCTAATCCTAATCCCCCGC
GCAGGGAGGGACAAAGAAAACAAAAGGCAGGAGGTTAGTCCCACTCTTGG
AGATGGGCTCCACTGTTAGCCTTAGTTTTTAGATATTAACCCGAGCAGAG
GGAATTAGAAAGGCATCAGTAGAAGGAAATAGAGGAGATGAATAAGATGT
ACTAGTAAGTGGAGCGTGCAGGCATAGCGGGAATCCCGAAGAAAAAGAAG
CCTCCCCCGCCCCCCTCCCCCTTTTTCAAAAATTTGACGACGAG
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protein sequence of NO08G00090.1

>NO08G00090.1-protein ID=NO08G00090.1-protein|Name=NO08G00090.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1526bp
MYMHTHPPFHHSLPILHRRDANSRPRPTENPFSIGFHSRSSLIYPGPWGK
CSWHEYRTPRNIKTMQRVQSTLGLGVTHSTAPSHLSSTSSSSSTIQSEGA
TSPVSTPPLKMSSLRSLFSRPLIGSKMQLGISTGIDKQPVTVASVATIGE
DDEVCVLSPSAATFLSPSHSETLSPNSPYPASPTIPMTTTRTTAMPSKAG
MTSIIALSMQHQWSLLSRPQSWRISSPLSSPGTLHIADSLHLSPSQPKPH
HEQQQQGQLQQRQLPESGGEGSSSPPSSLLSPLEQLQQQLYPQRLFAFTG
VPSPLHRASNHASRSNLSGNGAACPSSPSFSSITPSASACPSSPMPSPLR
NVAPASAPVSTARTLAAEAAATKTTTTTTTAPPTPNHSLSSRPRLALPQA
SRRPISIKIDAGPGPSPPTSPYHHEDDEDGRGVEGRRPSVPASAHLRPSA
STNSLLHQHYHPHKQQQHHFAEDGSIRLGGFDIGIGGLSPSPSENDISGL
LLSSLSCLTAPSGSHMEGGSAGGRDKSSSSSACSSNSSSSSSMSPSRQHV
SQRLSIHANATSRGGGGGKGGGGKGGMGGLGGVVGDGCSNNLVVVGKLGR
GNGGTVMKAIYLPTMRPVALKSVHLYNPERRQQMVQELSMLYSNLADINF
EEEEGEGDRGMEENDEEGGTKTMEEIVSKRERVAVKPEEEERRRKGHRRG
WSGGGGGDCISIADTCMERGSFSSFRDSSWRADSLDDGSGSSNGGALGSG
VRASISSSMEKEKKKEDTAVALPVIATTTCVTSLSPASIFIDCHAPLPPS
LSTDAPSGSSSSFARDKRAVSAPALPTFTRGRPVPLSELQPVTPPRRQPM
CSIAGDDEAEKVEEVKGESPVVPRPSVIAQQPTVVPQADIHRFEAPSSHL
HCSAASIDELSPESSTTVAPSTPRATPALAPICPLPSPQAPHSPSMDKSS
DSCSRSPSKFTLPSSGARGVGSQLRLTINEAVTDTVSQACPFIVSFYDVF
ADPARGTVNLLVEYMDGGSLEDLVKAGGCDDEVVLANMAKCILLGLNYLH
ERQKIHRDIKPGNLLMNTKGVVKIADFGVSRNLTGTSDLSKTFVGTVGYM
SPERIQGHKYNAKADIWSFGLSLLACALGVFPYERQVSSLSYFEMVNAVC
DEPSPELPPGDERFGSELRDFVRLCLLKDPADRPSAEKLLFHPFLQQYGG
AGGVSLQGFGTGASSRPRITAGGVIAAATIKSLKVKQAELHQIADALALH
YERRRLSDRRQSTASLSASVSTSGYVLGGSISGTGESVSGSTLTPHLPAP
PIPTSHGCIQMAYISVGQIHKLAENLQLDEKYVSRILHNKLQDLVIFPTK
EQEPWVSGGSERANVTSSYVGGHMQQSLSSSSISASGSVSGQPWPPLVVR
RASSLMRQRTGVSQVSPDIEEERSYRIERQQLFQGISGTSSGKISEEMGE
PYLPPSPMKKRAMTLMMMATTNHQVTSSGGGCIYRRDSMDSGSATWGTKP
LVLVPAEEKIQWQRQRVASGCCIMC*
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mRNA from alignment at chr8:34273..39616+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO08G00090.1 ID=NO08G00090.1|Name=NO08G00090.1|organism=Nannochloropsis oceanica|type=mRNA|length=5344bp|location=Sequence derived from alignment at chr8:34273..39616+ (Nannochloropsis oceanica)
TTTCCGTTGGTCGAACAGGCACGCCACCTTCGAGCCCCTCGAAGACGGCC AAAGGATGAGGTCGAGATGTCAGGAATGAGTCATTGGGAGAATAGATTTA AGTGTTGCATAAATATCTGAGCATGTGATGGCCAACTCATGGCTGTACTT GCAGCTTACAGCGGCTGTTTCCCATAGCTACGCCATCTCGATTCTTTGCG CTCCCTGCCCTCATTCGTTCACTCCCAGCAATCACAATCTTCCCTTGCTT ACAGGTTTACTACTGCTCCAAAATTTACATTTACACACTAGCACACATGT ACATGCACACGCACCCACCCTTCCACCACAGCTTGCCCATTCTGCATCGT CGAGACGCAAACAGCAGGCCACGCCCCACAGAAAACCCCTTCTCCATAGG ATTTCACTCGAGGTCCAGTTTAATATACCCCGGGCCTTGGGGTAAATGCT CTTGGCACGAATATAGGACCCCACGTAACATAAAAACGATGCAGCGAGTA CAGTCCACGTTGGGCTTGGGGGTGACGCACTCCACAGCTCCTTCCCATCT GTCGTCCACCTCGTCGTCATCCTCGACAATTCAGTCGGAAGGGGCAACTT CCCCTGTTTCGACGCCTCCTCTTAAAATGTCAAGCCTGCGCTCTCTCTTT TCCAGACCACTTATCGGCTCGAAGATGCAGCTCGGCATCAGTACTGGCAT TGACAAGCAGCCCGTCACTGTCGCTTCCGTTGCGACCATTGGAGAGGACG ACGAAGTGTGCGTCCTCTCTCCATCCGCTGCCACATTTCTCTCGCCTTCG CACTCTGAGACATTGTCTCCTAATTCTCCCTACCCTGCTTCACCAACCAT CCCCATGACGACCACCCGTACCACGGCAATGCCATCTAAGGCGGGCATGA CCTCGATCATCGCCCTCTCCATGCAGCATCAATGGTCCCTACTTTCACGG CCCCAGTCCTGGCGCATCTCCAGCCCCTTATCATCTCCCGGCACCTTGCA TATTGCGGACAGCCTTCACCTTTCCCCCAGCCAACCAAAACCGCACCATG AGCAACAGCAGCAGGGACAGCTGCAGCAGCGGCAGCTTCCGGAAAGCGGC GGAGAAGGCAGTAGCAGCCCTCCTTCATCGTTGTTGAGTCCTTTGGAGCA ACTACAGCAGCAACTTTACCCTCAGCGTCTGTTTGCCTTTACTGGCGTTC CATCTCCTCTTCATCGTGCCAGCAACCACGCGAGTCGTTCCAACCTCAGC GGAAATGGTGCGGCTTGTCCATCATCACCATCATTCTCATCCATAACACC GTCAGCATCGGCGTGTCCGTCATCGCCCATGCCCTCCCCTCTTCGAAATG TAGCGCCAGCATCTGCGCCAGTATCGACAGCTAGGACGTTAGCAGCAGAA GCTGCAGCAACAAAAACAACAACAACTACAACAACAGCCCCTCCGACCCC TAATCATTCCCTCTCTTCGCGGCCACGCCTCGCCCTACCCCAGGCCTCTC GCCGCCCCATATCCATCAAAATCGACGCCGGCCCTGGCCCTAGCCCGCCC ACCTCTCCCTATCACCATGAAGATGATGAAGATGGAAGGGGAGTTGAAGG ACGTAGGCCCTCCGTTCCTGCCTCCGCGCACCTTCGGCCTTCTGCCTCGA CCAACTCCCTCCTTCACCAGCACTACCACCCTCACAAGCAACAACAGCAC CACTTCGCTGAGGACGGAAGCATACGTCTCGGAGGGTTCGACATAGGCAT TGGTGGGCTCAGCCCCTCCCCTTCCGAAAACGACATTTCGGGCCTTCTCC TCTCCTCACTCTCCTGCCTCACAGCTCCCTCCGGCAGCCACATGGAGGGA GGGAGTGCGGGCGGAAGGGATAAGAGCAGTAGCAGCTCCGCGTGCAGCAG CAACAGCAGCAGCAGCAGCAGCATGAGTCCATCACGACAACACGTGTCCC AGCGACTGAGCATCCACGCCAATGCCACGAGTAGAGGAGGAGGAGGAGGG AAGGGAGGTGGAGGAAAAGGAGGAATGGGAGGCTTGGGAGGGGTAGTGGG GGATGGGTGCTCGAATAATTTGGTGGTGGTGGGGAAGCTTGGAAGAGGAA ATGGAGGGACAGTGATGAAGGCAATTTACTTACCGACGATGAGGCCGGTG GCTTTAAAGAGCGTCCACCTCTACAATCCCGAGAGGCGCCAGCAGATGGT GCAGGAGCTGAGCATGCTTTATTCGAATCTGGCGGATATTAACTTTGAGG AAGAGGAGGGGGAGGGAGACAGAGGAATGGAAGAGAATGATGAGGAAGGG GGGACGAAGACGATGGAAGAGATCGTGAGCAAGAGAGAGCGGGTGGCTGT CAAGCCGGAAGAGGAGGAGAGGAGGAGAAAGGGCCACCGTCGAGGTTGGT CTGGCGGCGGAGGCGGGGACTGCATCAGTATTGCTGACACTTGTATGGAG CGCGGGTCTTTTTCGTCCTTCCGCGACTCGTCTTGGAGAGCTGATTCTCT TGACGACGGAAGCGGGAGCAGTAACGGCGGAGCGCTTGGGAGCGGCGTGC GGGCGTCAATTTCCTCTTCCATGGAGAAGGAGAAAAAGAAGGAGGACACT GCTGTTGCATTGCCAGTGATTGCCACCACTACGTGCGTCACATCTTTGTC TCCCGCCAGTATATTCATCGATTGCCACGCCCCCCTACCCCCTTCCCTCT CTACCGATGCACCCTCCGGCTCTTCCTCCTCCTTCGCGCGGGACAAGCGG GCAGTCTCGGCTCCGGCGTTGCCCACATTCACGCGCGGCCGACCTGTTCC CTTGTCGGAACTTCAGCCAGTCACTCCTCCTCGTCGTCAACCCATGTGCT CAATTGCAGGCGATGACGAAGCCGAAAAGGTAGAGGAGGTGAAGGGAGAG AGCCCGGTTGTGCCTCGTCCTTCCGTTATTGCTCAGCAGCCGACAGTGGT GCCACAAGCCGATATACATCGCTTTGAAGCACCATCCTCCCATTTGCATT GCTCAGCAGCAAGCATTGACGAATTGAGTCCTGAGAGCAGCACCACAGTT GCGCCGAGTACCCCGCGCGCGACCCCTGCCCTAGCTCCGATTTGTCCTCT GCCATCCCCACAAGCTCCTCACTCCCCTTCTATGGACAAATCCAGTGACA GCTGCAGCAGGAGCCCCAGTAAGTTCACCCTGCCCAGTAGTGGTGCCCGC GGCGTAGGCTCACAGTTGCGGCTGACCATTAACGAGGCAGTGACCGATAC CGTGTCGCAAGCCTGTCCCTTCATCGTCTCATTCTACGATGTTTTTGCGG ATCCAGCTCGCGGTACCGTCAACCTGCTAGTTGAGTACATGGACGGCGGC TCCCTCGAGGACCTGGTTAAAGCAGGTGGGTGCGATGACGAGGTTGTGCT GGCGAACATGGCAAAATGCATCTTGCTGGGCCTTAATTACCTGCACGAGC GACAAAAGATCCACCGGGATATCAAACCGGGTAACCTGCTCATGAACACA AAAGGTGTTGTCAAAATCGCCGACTTTGGCGTGTCACGGAACCTGACAGG GACTTCGGACCTATCTAAGACGTTTGTGGGCACGGTAGGGTACATGAGTC CGGAGCGGATCCAGGGACACAAGTACAATGCCAAGGCCGATATATGGAGC TTCGGCTTGAGCTTGCTGGCATGTGCTCTGGGTGTATTCCCGTACGAGCG TCAAGTCTCTTCGCTAAGCTATTTTGAGATGGTGAATGCCGTTTGTGATG AGCCCAGCCCAGAGCTGCCGCCTGGGGACGAACGCTTCGGATCCGAGTTA CGTGACTTTGTGCGATTGTGTCTTCTCAAGGACCCCGCGGACCGGCCTTC AGCGGAAAAACTCCTGTTTCATCCTTTTTTACAACAATATGGTGGTGCAG GTGGAGTGTCGCTGCAGGGATTTGGGACAGGTGCGTCAAGTCGGCCCCGG ATTACTGCCGGTGGGGTGATTGCAGCTGCGACAATCAAGTCTCTCAAAGT CAAACAAGCGGAGCTTCACCAAATAGCGGACGCTCTGGCACTGCACTACG AACGCCGGCGTCTTTCTGATCGCAGGCAGAGCACAGCTTCACTCTCAGCC TCGGTGTCGACCAGTGGCTATGTTTTGGGCGGTAGTATCAGTGGGACTGG TGAAAGCGTGAGTGGAAGTACCTTAACGCCTCACTTACCTGCTCCCCCTA TCCCCACTTCTCACGGATGCATTCAAATGGCTTACATCAGCGTCGGTCAG ATCCACAAGCTGGCGGAGAATCTGCAGCTAGATGAGAAGTACGTAAGCCG GATACTTCACAACAAGCTCCAGGACCTGGTCATATTTCCGACAAAGGAGC AGGAGCCATGGGTATCGGGAGGCAGCGAAAGGGCGAATGTGACGTCAAGC TATGTTGGAGGGCATATGCAGCAGTCCTTATCGTCCTCGTCCATCTCCGC GTCCGGTTCCGTCTCGGGCCAGCCGTGGCCTCCCTTGGTCGTGAGACGCG CGTCATCATTGATGAGGCAACGCACCGGGGTAAGCCAAGTATCACCAGAT ATCGAGGAAGAGAGGTCCTATCGGATCGAGCGACAGCAGCTGTTTCAGGG TATATCGGGGACATCATCTGGCAAGATTTCCGAAGAGATGGGGGAGCCGT ACTTGCCGCCCTCTCCTATGAAGAAGAGGGCCATGACATTGATGATGATG GCCACCACCAATCATCAAGTGACCAGCAGCGGTGGCGGCTGTATTTATCG TAGGGATAGCATGGACAGCGGGTCAGCAACGTGGGGCACCAAACCCCTGG TGCTGGTGCCTGCCGAAGAAAAGATTCAGTGGCAGCGGCAGCGGGTGGCT TCGGGCTGTTGCATAATGTGTTAAATTCGTCGTGTAGATAAGAATAGGTT TGGAGATCCTAGAATGATAAATAGATAGTATGCGTTTGCCGAAGTCAAGA GGAGTGAAGGAAATACGAGAGGAAGAAGGAATGGCGAGGAGAAGAGGACA GACCCCTCGACTCTAAATCGACATTAATAGTGATTCACCGTTAAAATATC TCAGCTGTGGATTGGTTTAAAGATTTTATCGCCTAATCCTAATCCCCCGC GCAGGGAGGGACAAAGAAAACAAAAGGCAGGAGGTTAGTCCCACTCTTGG AGATGGGCTCCACTGTTAGCCTTAGTTTTTAGATATTAACCCGAGCAGAG GGAATTAGAAAGGCATCAGTAGAAGGAAATAGAGGAGATGAATAAGATGT ACTAGTAAGTGGAGCGTGCAGGCATAGCGGGAATCCCGAAGAAAAAGAAG CCTCCCCCGCCCCCCTCCCCCTTTTTCAAAAATTTGACGACGAG
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Coding sequence (CDS) from alignment at chr8:34273..39616+

>NO08G00090.1 ID=NO08G00090.1|Name=NO08G00090.1|organism=Nannochloropsis oceanica|type=CDS|length=4578bp|location=Sequence derived from alignment at chr8:34273..39616+ (Nannochloropsis oceanica)
ATGTACATGCACACGCACCCACCCTTCCACCACAGCTTGCCCATTCTGCA
TCGTCGAGACGCAAACAGCAGGCCACGCCCCACAGAAAACCCCTTCTCCA
TAGGATTTCACTCGAGGTCCAGTTTAATATACCCCGGGCCTTGGGGTAAA
TGCTCTTGGCACGAATATAGGACCCCACGTAACATAAAAACGATGCAGCG
AGTACAGTCCACGTTGGGCTTGGGGGTGACGCACTCCACAGCTCCTTCCC
ATCTGTCGTCCACCTCGTCGTCATCCTCGACAATTCAGTCGGAAGGGGCA
ACTTCCCCTGTTTCGACGCCTCCTCTTAAAATGTCAAGCCTGCGCTCTCT
CTTTTCCAGACCACTTATCGGCTCGAAGATGCAGCTCGGCATCAGTACTG
GCATTGACAAGCAGCCCGTCACTGTCGCTTCCGTTGCGACCATTGGAGAG
GACGACGAAGTGTGCGTCCTCTCTCCATCCGCTGCCACATTTCTCTCGCC
TTCGCACTCTGAGACATTGTCTCCTAATTCTCCCTACCCTGCTTCACCAA
CCATCCCCATGACGACCACCCGTACCACGGCAATGCCATCTAAGGCGGGC
ATGACCTCGATCATCGCCCTCTCCATGCAGCATCAATGGTCCCTACTTTC
ACGGCCCCAGTCCTGGCGCATCTCCAGCCCCTTATCATCTCCCGGCACCT
TGCATATTGCGGACAGCCTTCACCTTTCCCCCAGCCAACCAAAACCGCAC
CATGAGCAACAGCAGCAGGGACAGCTGCAGCAGCGGCAGCTTCCGGAAAG
CGGCGGAGAAGGCAGTAGCAGCCCTCCTTCATCGTTGTTGAGTCCTTTGG
AGCAACTACAGCAGCAACTTTACCCTCAGCGTCTGTTTGCCTTTACTGGC
GTTCCATCTCCTCTTCATCGTGCCAGCAACCACGCGAGTCGTTCCAACCT
CAGCGGAAATGGTGCGGCTTGTCCATCATCACCATCATTCTCATCCATAA
CACCGTCAGCATCGGCGTGTCCGTCATCGCCCATGCCCTCCCCTCTTCGA
AATGTAGCGCCAGCATCTGCGCCAGTATCGACAGCTAGGACGTTAGCAGC
AGAAGCTGCAGCAACAAAAACAACAACAACTACAACAACAGCCCCTCCGA
CCCCTAATCATTCCCTCTCTTCGCGGCCACGCCTCGCCCTACCCCAGGCC
TCTCGCCGCCCCATATCCATCAAAATCGACGCCGGCCCTGGCCCTAGCCC
GCCCACCTCTCCCTATCACCATGAAGATGATGAAGATGGAAGGGGAGTTG
AAGGACGTAGGCCCTCCGTTCCTGCCTCCGCGCACCTTCGGCCTTCTGCC
TCGACCAACTCCCTCCTTCACCAGCACTACCACCCTCACAAGCAACAACA
GCACCACTTCGCTGAGGACGGAAGCATACGTCTCGGAGGGTTCGACATAG
GCATTGGTGGGCTCAGCCCCTCCCCTTCCGAAAACGACATTTCGGGCCTT
CTCCTCTCCTCACTCTCCTGCCTCACAGCTCCCTCCGGCAGCCACATGGA
GGGAGGGAGTGCGGGCGGAAGGGATAAGAGCAGTAGCAGCTCCGCGTGCA
GCAGCAACAGCAGCAGCAGCAGCAGCATGAGTCCATCACGACAACACGTG
TCCCAGCGACTGAGCATCCACGCCAATGCCACGAGTAGAGGAGGAGGAGG
AGGGAAGGGAGGTGGAGGAAAAGGAGGAATGGGAGGCTTGGGAGGGGTAG
TGGGGGATGGGTGCTCGAATAATTTGGTGGTGGTGGGGAAGCTTGGAAGA
GGAAATGGAGGGACAGTGATGAAGGCAATTTACTTACCGACGATGAGGCC
GGTGGCTTTAAAGAGCGTCCACCTCTACAATCCCGAGAGGCGCCAGCAGA
TGGTGCAGGAGCTGAGCATGCTTTATTCGAATCTGGCGGATATTAACTTT
GAGGAAGAGGAGGGGGAGGGAGACAGAGGAATGGAAGAGAATGATGAGGA
AGGGGGGACGAAGACGATGGAAGAGATCGTGAGCAAGAGAGAGCGGGTGG
CTGTCAAGCCGGAAGAGGAGGAGAGGAGGAGAAAGGGCCACCGTCGAGGT
TGGTCTGGCGGCGGAGGCGGGGACTGCATCAGTATTGCTGACACTTGTAT
GGAGCGCGGGTCTTTTTCGTCCTTCCGCGACTCGTCTTGGAGAGCTGATT
CTCTTGACGACGGAAGCGGGAGCAGTAACGGCGGAGCGCTTGGGAGCGGC
GTGCGGGCGTCAATTTCCTCTTCCATGGAGAAGGAGAAAAAGAAGGAGGA
CACTGCTGTTGCATTGCCAGTGATTGCCACCACTACGTGCGTCACATCTT
TGTCTCCCGCCAGTATATTCATCGATTGCCACGCCCCCCTACCCCCTTCC
CTCTCTACCGATGCACCCTCCGGCTCTTCCTCCTCCTTCGCGCGGGACAA
GCGGGCAGTCTCGGCTCCGGCGTTGCCCACATTCACGCGCGGCCGACCTG
TTCCCTTGTCGGAACTTCAGCCAGTCACTCCTCCTCGTCGTCAACCCATG
TGCTCAATTGCAGGCGATGACGAAGCCGAAAAGGTAGAGGAGGTGAAGGG
AGAGAGCCCGGTTGTGCCTCGTCCTTCCGTTATTGCTCAGCAGCCGACAG
TGGTGCCACAAGCCGATATACATCGCTTTGAAGCACCATCCTCCCATTTG
CATTGCTCAGCAGCAAGCATTGACGAATTGAGTCCTGAGAGCAGCACCAC
AGTTGCGCCGAGTACCCCGCGCGCGACCCCTGCCCTAGCTCCGATTTGTC
CTCTGCCATCCCCACAAGCTCCTCACTCCCCTTCTATGGACAAATCCAGT
GACAGCTGCAGCAGGAGCCCCAGTAAGTTCACCCTGCCCAGTAGTGGTGC
CCGCGGCGTAGGCTCACAGTTGCGGCTGACCATTAACGAGGCAGTGACCG
ATACCGTGTCGCAAGCCTGTCCCTTCATCGTCTCATTCTACGATGTTTTT
GCGGATCCAGCTCGCGGTACCGTCAACCTGCTAGTTGAGTACATGGACGG
CGGCTCCCTCGAGGACCTGGTTAAAGCAGGTGGGTGCGATGACGAGGTTG
TGCTGGCGAACATGGCAAAATGCATCTTGCTGGGCCTTAATTACCTGCAC
GAGCGACAAAAGATCCACCGGGATATCAAACCGGGTAACCTGCTCATGAA
CACAAAAGGTGTTGTCAAAATCGCCGACTTTGGCGTGTCACGGAACCTGA
CAGGGACTTCGGACCTATCTAAGACGTTTGTGGGCACGGTAGGGTACATG
AGTCCGGAGCGGATCCAGGGACACAAGTACAATGCCAAGGCCGATATATG
GAGCTTCGGCTTGAGCTTGCTGGCATGTGCTCTGGGTGTATTCCCGTACG
AGCGTCAAGTCTCTTCGCTAAGCTATTTTGAGATGGTGAATGCCGTTTGT
GATGAGCCCAGCCCAGAGCTGCCGCCTGGGGACGAACGCTTCGGATCCGA
GTTACGTGACTTTGTGCGATTGTGTCTTCTCAAGGACCCCGCGGACCGGC
CTTCAGCGGAAAAACTCCTGTTTCATCCTTTTTTACAACAATATGGTGGT
GCAGGTGGAGTGTCGCTGCAGGGATTTGGGACAGGTGCGTCAAGTCGGCC
CCGGATTACTGCCGGTGGGGTGATTGCAGCTGCGACAATCAAGTCTCTCA
AAGTCAAACAAGCGGAGCTTCACCAAATAGCGGACGCTCTGGCACTGCAC
TACGAACGCCGGCGTCTTTCTGATCGCAGGCAGAGCACAGCTTCACTCTC
AGCCTCGGTGTCGACCAGTGGCTATGTTTTGGGCGGTAGTATCAGTGGGA
CTGGTGAAAGCGTGAGTGGAAGTACCTTAACGCCTCACTTACCTGCTCCC
CCTATCCCCACTTCTCACGGATGCATTCAAATGGCTTACATCAGCGTCGG
TCAGATCCACAAGCTGGCGGAGAATCTGCAGCTAGATGAGAAGTACGTAA
GCCGGATACTTCACAACAAGCTCCAGGACCTGGTCATATTTCCGACAAAG
GAGCAGGAGCCATGGGTATCGGGAGGCAGCGAAAGGGCGAATGTGACGTC
AAGCTATGTTGGAGGGCATATGCAGCAGTCCTTATCGTCCTCGTCCATCT
CCGCGTCCGGTTCCGTCTCGGGCCAGCCGTGGCCTCCCTTGGTCGTGAGA
CGCGCGTCATCATTGATGAGGCAACGCACCGGGGTAAGCCAAGTATCACC
AGATATCGAGGAAGAGAGGTCCTATCGGATCGAGCGACAGCAGCTGTTTC
AGGGTATATCGGGGACATCATCTGGCAAGATTTCCGAAGAGATGGGGGAG
CCGTACTTGCCGCCCTCTCCTATGAAGAAGAGGGCCATGACATTGATGAT
GATGGCCACCACCAATCATCAAGTGACCAGCAGCGGTGGCGGCTGTATTT
ATCGTAGGGATAGCATGGACAGCGGGTCAGCAACGTGGGGCACCAAACCC
CTGGTGCTGGTGCCTGCCGAAGAAAAGATTCAGTGGCAGCGGCAGCGGGT
GGCTTCGGGCTGTTGCATAATGTGTTAA
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Synonyms
Publications