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Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
chr7 | genome | chr7:1314980..1316828 - |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
BLAST of NO07G04660.1 vs.
Match: XP_005855423.1 (na+-dependent inorganic phosphate cotransporter [Nannochloropsis gaditana CCMP526]; EKU20930.1 na+-dependent inorganic phosphate cotransporter [Nannochloropsis gaditana CCMP526]; EWM26916.1 sodium-dependent phosphate transport protein [Nannochloropsis gaditana]) HSP 1 Score: 605.9 bits (1561), Expect = 1.300e-169 Identity = 339/527 (64.33%), Postives = 401/527 (76.09%), Query Frame = 0
Query: 21 VTGFTLPFTCLRSSYFVPKNLSPYNSPLLRPSC--------SSLSPPRRLLASSRPPPALSPLHSSPPPWPFLLLSSAAILISYADRANLATCILPMAQELDWPLSAQGLVLSSFFVGYGLTGLLGGYLADRYGGSRVLQAGIFLWSTFTLLMPSFAQAGIITAVLARFFLGLGEGVAFPAIHAMIPLRVPPDSRSLAVSLITAASFLGAVFAFALSPLLIETAGWPSVFYFFGALPLLWFPLWWLYGGGETAKEDADGGLGAADGKGEERTVGRKVKENDTLQKVYLPDALVPYPPATSSTYPSSLPPSSSSGLSWSEAKYLLGRKEVQAILVAQYTQSWGIYGLLSWLPSYYNKTFNVDVSNLAAFTLAPYLLQALVGVSSGYLADSLIAAGWRVKRVRQLLQSAGTLLPALFLLLATSTYTTTAASSSPSLAFSFLYVTVGAGFSAFTLSGVSCSHLDVCPRHAGVVFAAGNTLATIGGLFSVPVASLLLEKTGNFDAVFALFAAHYLVGAVVYTAWIGEEDVL 540
VT F L LR P S + PLL+ S S P L S PPP S S PW FL+LSS AILISYADRANLATCILPMAQ+LDW LS+QG+VLS+FF GY LTGLLGGYLADR+GGSRVLQAGI LWS T L P+FA+AG+ V+ R LG+GEGVAFPAIHAMIP RVP SRSLAVSLIT AS+LGAV AFALSPLLIE AGWPSVFYFFGALP+LWFP+WW + GE E +G A+ + + R N + K D + P+T+++ SS PP GL+W++A++LL RKEV AILVAQYTQ+WGIYGLLSWLPSYY+KTF++DV+ LAAFTLAPYL+Q LVG++SGYLAD+LIAAGW +KRVRQLLQ+AGT+LPALFLLLAT+T+ T++ S+S SL FSF YVT+GAG SAFTL GVSCSHLD+CPR+AG++FAAGNTLAT+GGL SVP+A L+LEK G+FDAVFALFAAHY+VGA +Y AWIG+ED+L
Sbjct: 29 VTSFRLQQPWLR-----PPLSSTVSDPLLKSSIGYEQHHDLSFTRHPMPLYDSRNPPPVQSQT-GSRTPWLFLVLSSTAILISYADRANLATCILPMAQDLDWSLSSQGVVLSAFFAGYALTGLLGGYLADRFGGSRVLQAGIILWSVCTFLTPAFAKAGLGAMVMDRVLLGMGEGVAFPAIHAMIPQRVPAPSRSLAVSLITGASYLGAVLAFALSPLLIEEAGWPSVFYFFGALPVLWFPVWWAW--GEERSEAMEG--KEAESEEKARCGEGYPLSNPSSSKSQRIDLMPSSAPSTAASTTSSAPP---EGLTWAQARFLLARKEVWAILVAQYTQAWGIYGLLSWLPSYYSKTFDIDVTQLAAFTLAPYLVQTLVGIASGYLADNLIAAGWSIKRVRQLLQTAGTVLPALFLLLATTTHNTSSDSAS-SLLFSFFYVTIGAGLSAFTLGGVSCSHLDICPRNAGLIFAAGNTLATVGGLVSVPIAGLVLEKCGSFDAVFALFAAHYVVGAALYAAWIGDEDIL 541
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO07G04660.1 ID=NO07G04660.1|Name=NO07G04660.1|organism=Nannochloropsis oceanica|type=mRNA|length=1674bp ATGTCCCTCGCCCGAGTGAACCTCCTCCAAGTCGTCCTTGTAGTCACCGC CATGACTGCCGTCACCGGCTTCACCTTACCATTCACTTGCCTGCGCTCTT CCTACTTCGTTCCAAAGAACCTTTCCCCGTATAATTCCCCCCTCCTCCGT CCTTCCTGCTCCTCTCTCTCCCCTCCACGTCGCCTGCTCGCCTCGTCGCG CCCACCTCCGGCGCTTTCCCCATTGCACTCTTCCCCTCCGCCCTGGCCCT TCCTGCTCCTTTCCAGCGCGGCCATCCTCATTTCCTACGCCGACCGGGCC AACCTCGCCACCTGCATCCTTCCCATGGCGCAAGAGCTGGACTGGCCTCT CTCAGCCCAGGGCCTGGTGCTCTCTTCTTTCTTTGTGGGCTACGGCCTCA CGGGCCTGCTGGGTGGATACCTTGCCGACCGTTACGGGGGATCAAGGGTC CTGCAAGCGGGCATCTTCCTCTGGTCCACCTTCACCTTGCTCATGCCTTC TTTCGCCCAGGCCGGCATCATCACCGCGGTGCTCGCTCGCTTTTTTCTGG GCCTGGGTGAGGGGGTTGCCTTTCCAGCAATTCATGCGATGATTCCTCTC CGTGTGCCTCCGGACAGTCGCAGCTTGGCCGTGTCCCTCATCACGGCTGC AAGCTTCTTGGGGGCGGTCTTCGCCTTTGCCCTCTCGCCGCTTCTCATCG AGACGGCGGGCTGGCCGTCAGTCTTCTACTTCTTCGGGGCCTTGCCCTTG CTCTGGTTTCCGCTGTGGTGGCTCTACGGAGGAGGGGAGACAGCGAAGGA AGACGCGGACGGAGGTCTTGGCGCCGCTGATGGAAAAGGGGAGGAAAGGA CGGTAGGACGAAAGGTAAAAGAGAATGACACGCTCCAAAAGGTCTACCTG CCCGATGCGCTTGTGCCATATCCACCTGCCACGAGTAGTACTTACCCTTC TTCTCTCCCGCCCTCCTCATCCTCGGGGTTGAGCTGGTCTGAGGCCAAGT ATCTGCTGGGTCGGAAGGAGGTGCAAGCCATCTTGGTGGCGCAGTACACG CAGTCGTGGGGCATCTACGGCCTTCTCAGCTGGCTACCCTCGTATTACAA CAAGACCTTCAACGTCGACGTTTCAAACCTCGCCGCCTTCACACTCGCAC CCTACCTCCTCCAGGCCCTGGTCGGTGTCTCTTCGGGCTACCTGGCCGAC AGCCTTATAGCCGCTGGGTGGCGCGTCAAGCGTGTGCGGCAGCTGCTCCA GTCGGCTGGCACCCTGCTCCCCGCCCTATTCCTCCTCCTTGCTACCTCTA CCTACACCACCACCGCTGCGTCCTCCTCCCCCTCCCTTGCTTTCTCCTTC CTCTATGTCACCGTAGGTGCGGGTTTCTCGGCCTTTACCCTTTCCGGAGT GTCATGCTCCCATCTGGACGTCTGCCCCCGCCATGCCGGCGTCGTCTTCG CTGCGGGCAACACGCTCGCCACGATCGGTGGGCTTTTCTCTGTGCCTGTG GCGAGTCTGCTGCTGGAAAAAACGGGAAATTTCGATGCGGTCTTTGCCTT GTTCGCAGCCCACTATCTGGTGGGGGCAGTCGTGTACACCGCCTGGATTG GGGAGGAGGATGTCTTGCTGGGGTGGGAGGGAGAGAGGGAAAGTGAAGAG GGGAAGAATGAGGGGGAGGAATAG back to topprotein sequence of NO07G04660.1 >NO07G04660.1-protein ID=NO07G04660.1-protein|Name=NO07G04660.1|organism=Nannochloropsis oceanica|type=polypeptide|length=558bp MSLARVNLLQVVLVVTAMTAVTGFTLPFTCLRSSYFVPKNLSPYNSPLLR PSCSSLSPPRRLLASSRPPPALSPLHSSPPPWPFLLLSSAAILISYADRA NLATCILPMAQELDWPLSAQGLVLSSFFVGYGLTGLLGGYLADRYGGSRV LQAGIFLWSTFTLLMPSFAQAGIITAVLARFFLGLGEGVAFPAIHAMIPL RVPPDSRSLAVSLITAASFLGAVFAFALSPLLIETAGWPSVFYFFGALPL LWFPLWWLYGGGETAKEDADGGLGAADGKGEERTVGRKVKENDTLQKVYL PDALVPYPPATSSTYPSSLPPSSSSGLSWSEAKYLLGRKEVQAILVAQYT QSWGIYGLLSWLPSYYNKTFNVDVSNLAAFTLAPYLLQALVGVSSGYLAD SLIAAGWRVKRVRQLLQSAGTLLPALFLLLATSTYTTTAASSSPSLAFSF LYVTVGAGFSAFTLSGVSCSHLDVCPRHAGVVFAAGNTLATIGGLFSVPV ASLLLEKTGNFDAVFALFAAHYLVGAVVYTAWIGEEDVLLGWEGERESEE GKNEGEE* back to topmRNA from alignment at chr7:1314980..1316828- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO07G04660.1 ID=NO07G04660.1|Name=NO07G04660.1|organism=Nannochloropsis oceanica|type=mRNA|length=1849bp|location=Sequence derived from alignment at chr7:1314980..1316828- (Nannochloropsis oceanica) ATGTCCCTCGCCCGAGTGAACCTCCTCCAAGTCGTCCTTGTAGTCACCGC
CATGACTGCCGTCACCGGCTTCACCTTACCATTCACTTGCCTGCGCTCTT
CCTACTTCGTTCCAAAGAACCTTTCCCCGTATAATTCCCCCCTCCTCCGT
CCTTCCTGCTCCTCTCTCTCCCCTCCACGTCGCCTGCTCGCCTCGTCGCG
CCCACCTCCGGCGCTTTCCCCATTGCACTCTTCCCCTCCGCCCTGGCCCT
TCCTGCTCCTTTCCAGCGCGGCCATCCTCATTTCCTACGCCGACCGGGCC
AACCTCGCCACCTGCATCCTTCCCATGGCGCAAGAGCTGGACTGGCCTCT
CTCAGCCCAGGGCCTGGTGCTCTCTTCTTTCTTTGTGGGCTACGGCCTCA
CGGGCCTGCTGGGTGGATACCTTGCCGACCGTTACGGGGGATCAAGGGTC
CTGCAAGCGGGCATCTTCCTCTGGTCCACCTTCACCTTGCTCATGCCTTC
TTTCGCCCAGGCCGGCATCATCACCGCGGTGCTCGCTCGCTTTTTTCTGG
GCCTGGGTGAGGGGGTTGCCTTTCCAGCAATTCATGCGATGATTCCTCTC
CGTGTGCCTCCGGACAGTCGCAGCTTGGCCGTGTCCCTCATCACGGCTGC
AAGCTTCTTGGGGGCGGTCTTCGCCTTTGCCCTCTCGCCGCTTCTCATCG
AGACGGCGGGCTGGCCGTCAGTCTTCTACTTCTTCGGGGCCTTGCCCTTG
CTCTGGTTTCCGCTGTGGTGGCTCTACGGAGGAGGGGAGACAGCGAAGGA
AGACGCGGACGGAGGTCTTGGCGCCGCTGATGGAAAAGGGGAGGAAAGGA
CGGTAGGACGAAAGGTAAAAGAGAATGACACGCTCCAAAAGGTCTACCTG
CCCGATGCGCTTGTGCCATATCCACCTGCCACGAGTAGTACTTACCCTTC
TTCTCTCCCGCCCTCCTCATCCTCGGGGTTGAGCTGGTCTGAGGCCAAGT
ATCTGCTGGGTCGGAAGGAGGTGCAAGCCATCTTGGTGGCGCAGTACACG
CAGTCGTGGGGCATCTACGGCCTTCTCAGCTGGCTACCCTCGTATTACAA
CAAGGTGGGTTGGACGGGGGATAGAGTGGCAGGGCGGGCTTTCGCTCTCC
TTTCCGTTGCTTTCCTTACAAATAAGACGAGTCATGATTACATGATTTGG
TTGATTATCTTAACGTCTAGCCAAACATTCTTGAAATACACCAACTGAGT
CACTCCTTTCCCCCCCTCCCTCCCCGCAGACCTTCAACGTCGACGTTTCA
AACCTCGCCGCCTTCACACTCGCACCCTACCTCCTCCAGGCCCTGGTCGG
TGTCTCTTCGGGCTACCTGGCCGACAGCCTTATAGCCGCTGGGTGGCGCG
TCAAGCGTGTGCGGCAGCTGCTCCAGTCGGCTGGCACCCTGCTCCCCGCC
CTATTCCTCCTCCTTGCTACCTCTACCTACACCACCACCGCTGCGTCCTC
CTCCCCCTCCCTTGCTTTCTCCTTCCTCTATGTCACCGTAGGTGCGGGTT
TCTCGGCCTTTACCCTTTCCGGAGTGTCATGCTCCCATCTGGACGTCTGC
CCCCGCCATGCCGGCGTCGTCTTCGCTGCGGGCAACACGCTCGCCACGAT
CGGTGGGCTTTTCTCTGTGCCTGTGGCGAGTCTGCTGCTGGAAAAAACGG
GAAATTTCGATGCGGTCTTTGCCTTGTTCGCAGCCCACTATCTGGTGGGG
GCAGTCGTGTACACCGCCTGGATTGGGGAGGAGGATGTCTTGCTGGGGTG
GGAGGGAGAGAGGGAAAGTGAAGAGGGGAAGAATGAGGGGGAGGAATAG back to topCoding sequence (CDS) from alignment at chr7:1314980..1316828- >NO07G04660.1 ID=NO07G04660.1|Name=NO07G04660.1|organism=Nannochloropsis oceanica|type=CDS|length=1674bp|location=Sequence derived from alignment at chr7:1314980..1316828- (Nannochloropsis oceanica) ATGTCCCTCGCCCGAGTGAACCTCCTCCAAGTCGTCCTTGTAGTCACCGC CATGACTGCCGTCACCGGCTTCACCTTACCATTCACTTGCCTGCGCTCTT CCTACTTCGTTCCAAAGAACCTTTCCCCGTATAATTCCCCCCTCCTCCGT CCTTCCTGCTCCTCTCTCTCCCCTCCACGTCGCCTGCTCGCCTCGTCGCG CCCACCTCCGGCGCTTTCCCCATTGCACTCTTCCCCTCCGCCCTGGCCCT TCCTGCTCCTTTCCAGCGCGGCCATCCTCATTTCCTACGCCGACCGGGCC AACCTCGCCACCTGCATCCTTCCCATGGCGCAAGAGCTGGACTGGCCTCT CTCAGCCCAGGGCCTGGTGCTCTCTTCTTTCTTTGTGGGCTACGGCCTCA CGGGCCTGCTGGGTGGATACCTTGCCGACCGTTACGGGGGATCAAGGGTC CTGCAAGCGGGCATCTTCCTCTGGTCCACCTTCACCTTGCTCATGCCTTC TTTCGCCCAGGCCGGCATCATCACCGCGGTGCTCGCTCGCTTTTTTCTGG GCCTGGGTGAGGGGGTTGCCTTTCCAGCAATTCATGCGATGATTCCTCTC CGTGTGCCTCCGGACAGTCGCAGCTTGGCCGTGTCCCTCATCACGGCTGC AAGCTTCTTGGGGGCGGTCTTCGCCTTTGCCCTCTCGCCGCTTCTCATCG AGACGGCGGGCTGGCCGTCAGTCTTCTACTTCTTCGGGGCCTTGCCCTTG CTCTGGTTTCCGCTGTGGTGGCTCTACGGAGGAGGGGAGACAGCGAAGGA AGACGCGGACGGAGGTCTTGGCGCCGCTGATGGAAAAGGGGAGGAAAGGA CGGTAGGACGAAAGGTAAAAGAGAATGACACGCTCCAAAAGGTCTACCTG CCCGATGCGCTTGTGCCATATCCACCTGCCACGAGTAGTACTTACCCTTC TTCTCTCCCGCCCTCCTCATCCTCGGGGTTGAGCTGGTCTGAGGCCAAGT ATCTGCTGGGTCGGAAGGAGGTGCAAGCCATCTTGGTGGCGCAGTACACG CAGTCGTGGGGCATCTACGGCCTTCTCAGCTGGCTACCCTCGTATTACAA CAAGACCTTCAACGTCGACGTTTCAAACCTCGCCGCCTTCACACTCGCAC CCTACCTCCTCCAGGCCCTGGTCGGTGTCTCTTCGGGCTACCTGGCCGAC AGCCTTATAGCCGCTGGGTGGCGCGTCAAGCGTGTGCGGCAGCTGCTCCA GTCGGCTGGCACCCTGCTCCCCGCCCTATTCCTCCTCCTTGCTACCTCTA CCTACACCACCACCGCTGCGTCCTCCTCCCCCTCCCTTGCTTTCTCCTTC CTCTATGTCACCGTAGGTGCGGGTTTCTCGGCCTTTACCCTTTCCGGAGT GTCATGCTCCCATCTGGACGTCTGCCCCCGCCATGCCGGCGTCGTCTTCG CTGCGGGCAACACGCTCGCCACGATCGGTGGGCTTTTCTCTGTGCCTGTG GCGAGTCTGCTGCTGGAAAAAACGGGAAATTTCGATGCGGTCTTTGCCTT GTTCGCAGCCCACTATCTGGTGGGGGCAGTCGTGTACACCGCCTGGATTG GGGAGGAGGATGTCTTGCTGGGGTGGGAGGGAGAGAGGGAAAGTGAAGAG GGGAAGAATGAGGGGGAGGAATAG back to top
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