NO07G04440.1, NO07G04440.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO07G04440.1
Unique NameNO07G04440.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length939
Alignment locationchr7:1246293..1247231 -

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Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr7genomechr7:1246293..1247231 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO07G04440.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO07G04440NO07G04440Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO07G04440.1NO07G04440.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO07G04440.1.cds1NO07G04440.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO07G04440.1 ID=NO07G04440.1|Name=NO07G04440.1|organism=Nannochloropsis oceanica|type=mRNA|length=939bp
AAACAAGACCCCAACATCAGTCACAATGGTTCTCTCCACCTCCAAAGCTT
GCCTCTTCCTTATCGTGTTTGCGGTCCTCACGCGCCAAGCCTCGGCTGTG
CGCATGAAGAAAACGCTCTTGAGCCTCTACCAAGACCCTCCCACTTTGGT
CAATGGGACTTACAGCAGCTTCGTCTTCGCCACGTACGAGGCCGTGCTTC
GTTCGTCCAAGGATGGACCCATGGTTGGCACACTCTTTGGCACCACTATC
GTAAACACGGTGCTCGATACTAGCTTACAAACGGATTTGCGCGATCGCCA
CCTGACCTTTGATTTTGGTCCCAAGGGACAGATTACGGCGGCTGGCATCG
TCAGCTACCCGGCCAACACCTCCTTTCTCAATGTTGACGTCCCGACGACA
ATGGCCGTGACTGGCGGGAGCTTCGACTACTTCGGCGCGACGGGCCAAGT
CACGTCGCAGCGCCTGGATGCCACAGGGGCACACACACAGACTTTTCAGA
TATATTGCTTCAGAAAAGGGGGTGGCTTTCGTCTGAAGGCCCCTAAAGGC
GCCAAGTAAATATTCTAAACTGGTAAGCAGTGTCAAGGCATAATCTGTCG
GGAAATTAAGCCGCAGTGACTTATTTTTCTTTGTAACTTTCCTGTAGTGC
ATTGATAGCACTGCGTCCGGTCTCAAAAACTGAAGTACAAAGGGCAAAAA
GTAGGAGAAAATCATTTAATCACATCAACAAGCTATTTATTTAAACAGTT
TAATTCTTCATAGTCCCACGTGCATTTCTTCCTTTCCGTTCTAAACAAAA
CGGGGTCTGGGCACTAGTAAAGAGCAGCTATCTTTGGATAGTCTCGGGCC
TACTTAGGGCTGCATTGGTATTTTCGAACATGTGCAATTGTGTGTGCTGA
GCAAATATCATGCCTGTGACCAAATCAAATGAATCAAGT
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protein sequence of NO07G04440.1

>NO07G04440.1-protein ID=NO07G04440.1-protein|Name=NO07G04440.1|organism=Nannochloropsis oceanica|type=polypeptide|length=178bp
MVLSTSKACLFLIVFAVLTRQASAVRMKKTLLSLYQDPPTLVNGTYSSFV
FATYEAVLRSSKDGPMVGTLFGTTIVNTVLDTSLQTDLRDRHLTFDFGPK
GQITAAGIVSYPANTSFLNVDVPTTMAVTGGSFDYFGATGQVTSQRLDAT
GAHTQTFQIYCFRKGGGFRLKAPKGAK*
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mRNA from alignment at chr7:1246293..1247231-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO07G04440.1 ID=NO07G04440.1|Name=NO07G04440.1|organism=Nannochloropsis oceanica|type=mRNA|length=939bp|location=Sequence derived from alignment at chr7:1246293..1247231- (Nannochloropsis oceanica)
AAACAAGACCCCAACATCAGTCACAATGGTTCTCTCCACCTCCAAAGCTT
GCCTCTTCCTTATCGTGTTTGCGGTCCTCACGCGCCAAGCCTCGGCTGTG
CGCATGAAGAAAACGCTCTTGAGCCTCTACCAAGACCCTCCCACTTTGGT
CAATGGGACTTACAGCAGCTTCGTCTTCGCCACGTACGAGGCCGTGCTTC
GTTCGTCCAAGGATGGACCCATGGTTGGCACACTCTTTGGCACCACTATC
GTAAACACGGTGCTCGATACTAGCTTACAAACGGATTTGCGCGATCGCCA
CCTGACCTTTGATTTTGGTCCCAAGGGACAGATTACGGCGGCTGGCATCG
TCAGCTACCCGGCCAACACCTCCTTTCTCAATGTTGACGTCCCGACGACA
ATGGCCGTGACTGGCGGGAGCTTCGACTACTTCGGCGCGACGGGCCAAGT
CACGTCGCAGCGCCTGGATGCCACAGGGGCACACACACAGACTTTTCAGA
TATATTGCTTCAGAAAAGGGGGTGGCTTTCGTCTGAAGGCCCCTAAAGGC
GCCAAGTAAATATTCTAAACTGGTAAGCAGTGTCAAGGCATAATCTGTCG
GGAAATTAAGCCGCAGTGACTTATTTTTCTTTGTAACTTTCCTGTAGTGC
ATTGATAGCACTGCGTCCGGTCTCAAAAACTGAAGTACAAAGGGCAAAAA
GTAGGAGAAAATCATTTAATCACATCAACAAGCTATTTATTTAAACAGTT
TAATTCTTCATAGTCCCACGTGCATTTCTTCCTTTCCGTTCTAAACAAAA
CGGGGTCTGGGCACTAGTAAAGAGCAGCTATCTTTGGATAGTCTCGGGCC
TACTTAGGGCTGCATTGGTATTTTCGAACATGTGCAATTGTGTGTGCTGA
GCAAATATCATGCCTGTGACCAAATCAAATGAATCAAGT
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Coding sequence (CDS) from alignment at chr7:1246293..1247231-

>NO07G04440.1 ID=NO07G04440.1|Name=NO07G04440.1|organism=Nannochloropsis oceanica|type=CDS|length=534bp|location=Sequence derived from alignment at chr7:1246293..1247231- (Nannochloropsis oceanica)
ATGGTTCTCTCCACCTCCAAAGCTTGCCTCTTCCTTATCGTGTTTGCGGT
CCTCACGCGCCAAGCCTCGGCTGTGCGCATGAAGAAAACGCTCTTGAGCC
TCTACCAAGACCCTCCCACTTTGGTCAATGGGACTTACAGCAGCTTCGTC
TTCGCCACGTACGAGGCCGTGCTTCGTTCGTCCAAGGATGGACCCATGGT
TGGCACACTCTTTGGCACCACTATCGTAAACACGGTGCTCGATACTAGCT
TACAAACGGATTTGCGCGATCGCCACCTGACCTTTGATTTTGGTCCCAAG
GGACAGATTACGGCGGCTGGCATCGTCAGCTACCCGGCCAACACCTCCTT
TCTCAATGTTGACGTCCCGACGACAATGGCCGTGACTGGCGGGAGCTTCG
ACTACTTCGGCGCGACGGGCCAAGTCACGTCGCAGCGCCTGGATGCCACA
GGGGCACACACACAGACTTTTCAGATATATTGCTTCAGAAAAGGGGGTGG
CTTTCGTCTGAAGGCCCCTAAAGGCGCCAAGTAA
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Synonyms
Publications