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Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| chr7 | genome | chr7:1233205..1235504 - |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
BLAST of NO07G04410.1 vs.
Match: EWM28936.1 (hypothetical protein Naga_100511g5 [Nannochloropsis gaditana]) HSP 1 Score: 364.8 bits (935), Expect = 4.300e-97 Identity = 174/189 (92.06%), Postives = 182/189 (96.30%), Query Frame = 0
Query: 299 KARKWLHEPGARISACFTSLGDRREKGADLYVRIAELYRSTYPQDNVTFYGIGNVIPAVDMVVFDPMPQQQLDAFYRDEVDIIFNLERTQYRNGWPLGVEGLLMGLVLFTTDAYNLNDRNGFNFGSEVTIVTEGREDLTVEAIHRYTLNRHLLLEHSMRGQDRAWEMFGHDRQMGVIISEVGRRIKATS 488
KARK LHEPGARISACFTSLG+ REKGADLY RIAELYRSTYPQDNVTFYGIGNVI A DMVVFDPMPQQQLDAFYRDEVDIIFNLERTQYRNGWPLG EGLLMGLVLFTTDAYNLN+RNGFNFG+EVTIVTEGRE+LTVEAIHRYT+NRHLLLEHSMRGQDRAWE+FGHDRQMGVI+SEVGRR+ ATS
Sbjct: 10 KARKRLHEPGARISACFTSLGNTREKGADLYARIAELYRSTYPQDNVTFYGIGNVISAGDMVVFDPMPQQQLDAFYRDEVDIIFNLERTQYRNGWPLGTEGLLMGLVLFTTDAYNLNERNGFNFGTEVTIVTEGRENLTVEAIHRYTVNRHLLLEHSMRGQDRAWEIFGHDRQMGVILSEVGRRMNATS 198
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO07G04410.1 ID=NO07G04410.1|Name=NO07G04410.1|organism=Nannochloropsis oceanica|type=mRNA|length=2300bp
GGAGGGTGGAGGTTGATGTTGATGATGACGCATTGAAAATATGGGCATTG
GCCTTAGCATCCAAAATATGGGCCATGGCCTTCACAACACACAACACACG
CCTTGCAACGTGCTACTCCTCTCCTCCTCCTCCCATACTATCCCTACCAT
ACCATACAAGTCTTCTTCCCCTTCCATTTGTTGAAGCTTTCCTATGTTGT
TGCATTCTTTGCCAAGTGGGATGCGTCTCGATGCAGCATCATCATCATCA
TCAAAAAAGAAACAAAAAATAACCTCCGAAACGGGCTCTTTTTCACCTGG
TCTTCCCCTGCTTCTTCACACACCACGCACCATTACATAAGTCACTCCCC
CAGGTGTGCACCTGGCGTACATGCCCCCCCTTTACTTTATCCTTTATATG
ACTCCATCCCTCTCTTTTCCTATGACTCACACAACAAATACACACCCCTG
CTTGCCCATAGGGCGGGTGTTTAGATTAAAATTCATCACAAGCCCACTGC
ACAAAGATGAAGGACGCCCTACCTCAGCAGTCAATCACTTTCCAACTTCT
CAAAATTACAACACATGGTATTAAACGAATGAGAGCCACGGCCTCCCAAG
GCATCGCGGCGTCGTGGAGATGGAGGGCCCTCACTGCGGTAGCCGTAGTG
TCTGGAGCCCTCGCCCTGGCCGCAATGGCGCAGCTGCAGCAAGGGACGAC
GATCCTCGAAAGGGGTTGGACGGCTCCTGGAGACAGTCCGAGGGAATCTT
CTCAGCCGTCGCCTCCGCCCCGGAGCCACTGTGAGGTGATCGCCGACCCG
ACGGTCCGGCGCCCGAGGGTCCTGGTAACTGACATACTGTTCCCGACACC
CTTGTCGGCCTGGCGCTTAAATGAGCTTACTGCGTGGATGGGCGAGGTCG
ACCTGGACATCCTGGTCACTCGTCGTGCCGACGGGTTCTCCGCGGACTGG
GAGCCGATCCAAGAGAGCCACTGCCTTGCGGACTACAACGTTTTCGTGTT
CACGGAGGCCCACAGAGGATCCGTGGAGGGCATCAACTCCTTGGCCAACG
GGACCTTCGACACGTCTCCGTTCCTGGGTCACTGGCCTGCGGAGTACCTC
CTGCGTCCGCGGAAGTTCGGGACCTCATCCCCGTCGTTGAAGGACTACGA
TTGGGTCCATCACATCTTCCTCAACGCCTACGAGTTCTTCAACAAAGCGC
TTCCTGGCTACCCTCAGCGACAACAGAGCATCCACCTGTACCCCGGCGGA
CGATTCTTCATTGATCAAGAGTACACACTACCCCCCGAGGTCACCCTCTT
CACGACGCAGTCGTTCGTTCGGGATCATGCCGACAAGTGCTTTCCGAAGA
ACCCAAAGGTGGACGTCTTCGGAGGCCCCATGCTGGCCAAGGACGCGGTC
AAAGCTCGGAAGTGGCTCCACGAGCCAGGCGCCCGCATCAGCGCGTGCTT
TACATCACTGGGGGACAGGCGTGAGAAGGGTGCGGACCTTTACGTCAGGA
TCGCGGAGCTGTACCGTTCCACCTACCCTCAAGACAATGTTACCTTCTAC
GGGATCGGGAATGTGATTCCAGCCGTTGACATGGTTGTCTTCGATCCCAT
GCCTCAGCAGCAGCTGGATGCCTTCTACCGAGACGAGGTCGACATCATCT
TCAACCTCGAGCGCACGCAGTATCGCAACGGCTGGCCCCTCGGGGTGGAA
GGCTTGTTGATGGGGCTGGTCCTGTTCACGACGGACGCCTACAACCTGAA
CGACCGGAACGGGTTCAACTTCGGGTCCGAAGTCACCATTGTGACGGAGG
GGCGAGAGGATCTCACTGTGGAGGCCATCCATCGGTACACGTTGAACCGT
CACCTGCTCCTCGAGCATAGCATGCGGGGTCAGGACCGGGCGTGGGAGAT
GTTTGGGCACGACCGACAGATGGGTGTGATCATATCAGAGGTTGGGCGCC
GGATAAAGGCCACCTCAGAGCTTAGGGCAGAATAAACAATTGTCATCACA
CACACATAGATATACAAACACACCGCCAACGGTAGTTTCACCTTTTTCAA
GGACGTTGACGCCGATTAACAATTTGCGTTGCGTGATGAACGACGAGGAA
TGGATGTCAATGTAATTGTAGCTAGAAGAAGTGAAGAGCCTCGACATCAC
AGAATGAAGGGCGTCGACAAAAGGACGGTCACAGATCATAGTCATGTAGG
TATGTTGGCTCTGGTCGTTCGCAGACAAAGCGAGTATGTACCTTCTTACA
ACTTGTGTATCCATAGAAAATAAAATTTATAACTCCATTAGGGGTACCCC back to topprotein sequence of NO07G04410.1 >NO07G04410.1-protein ID=NO07G04410.1-protein|Name=NO07G04410.1|organism=Nannochloropsis oceanica|type=polypeptide|length=493bp
MKDALPQQSITFQLLKITTHGIKRMRATASQGIAASWRWRALTAVAVVSG
ALALAAMAQLQQGTTILERGWTAPGDSPRESSQPSPPPRSHCEVIADPTV
RRPRVLVTDILFPTPLSAWRLNELTAWMGEVDLDILVTRRADGFSADWEP
IQESHCLADYNVFVFTEAHRGSVEGINSLANGTFDTSPFLGHWPAEYLLR
PRKFGTSSPSLKDYDWVHHIFLNAYEFFNKALPGYPQRQQSIHLYPGGRF
FIDQEYTLPPEVTLFTTQSFVRDHADKCFPKNPKVDVFGGPMLAKDAVKA
RKWLHEPGARISACFTSLGDRREKGADLYVRIAELYRSTYPQDNVTFYGI
GNVIPAVDMVVFDPMPQQQLDAFYRDEVDIIFNLERTQYRNGWPLGVEGL
LMGLVLFTTDAYNLNDRNGFNFGSEVTIVTEGREDLTVEAIHRYTLNRHL
LLEHSMRGQDRAWEMFGHDRQMGVIISEVGRRIKATSELRAE* back to topmRNA from alignment at chr7:1233205..1235504- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO07G04410.1 ID=NO07G04410.1|Name=NO07G04410.1|organism=Nannochloropsis oceanica|type=mRNA|length=2300bp|location=Sequence derived from alignment at chr7:1233205..1235504- (Nannochloropsis oceanica)
GGAGGGTGGAGGTTGATGTTGATGATGACGCATTGAAAATATGGGCATTG
GCCTTAGCATCCAAAATATGGGCCATGGCCTTCACAACACACAACACACG
CCTTGCAACGTGCTACTCCTCTCCTCCTCCTCCCATACTATCCCTACCAT
ACCATACAAGTCTTCTTCCCCTTCCATTTGTTGAAGCTTTCCTATGTTGT
TGCATTCTTTGCCAAGTGGGATGCGTCTCGATGCAGCATCATCATCATCA
TCAAAAAAGAAACAAAAAATAACCTCCGAAACGGGCTCTTTTTCACCTGG
TCTTCCCCTGCTTCTTCACACACCACGCACCATTACATAAGTCACTCCCC
CAGGTGTGCACCTGGCGTACATGCCCCCCCTTTACTTTATCCTTTATATG
ACTCCATCCCTCTCTTTTCCTATGACTCACACAACAAATACACACCCCTG
CTTGCCCATAGGGCGGGTGTTTAGATTAAAATTCATCACAAGCCCACTGC
ACAAAGATGAAGGACGCCCTACCTCAGCAGTCAATCACTTTCCAACTTCT
CAAAATTACAACACATGGTATTAAACGAATGAGAGCCACGGCCTCCCAAG
GCATCGCGGCGTCGTGGAGATGGAGGGCCCTCACTGCGGTAGCCGTAGTG
TCTGGAGCCCTCGCCCTGGCCGCAATGGCGCAGCTGCAGCAAGGGACGAC
GATCCTCGAAAGGGGTTGGACGGCTCCTGGAGACAGTCCGAGGGAATCTT
CTCAGCCGTCGCCTCCGCCCCGGAGCCACTGTGAGGTGATCGCCGACCCG
ACGGTCCGGCGCCCGAGGGTCCTGGTAACTGACATACTGTTCCCGACACC
CTTGTCGGCCTGGCGCTTAAATGAGCTTACTGCGTGGATGGGCGAGGTCG
ACCTGGACATCCTGGTCACTCGTCGTGCCGACGGGTTCTCCGCGGACTGG
GAGCCGATCCAAGAGAGCCACTGCCTTGCGGACTACAACGTTTTCGTGTT
CACGGAGGCCCACAGAGGATCCGTGGAGGGCATCAACTCCTTGGCCAACG
GGACCTTCGACACGTCTCCGTTCCTGGGTCACTGGCCTGCGGAGTACCTC
CTGCGTCCGCGGAAGTTCGGGACCTCATCCCCGTCGTTGAAGGACTACGA
TTGGGTCCATCACATCTTCCTCAACGCCTACGAGTTCTTCAACAAAGCGC
TTCCTGGCTACCCTCAGCGACAACAGAGCATCCACCTGTACCCCGGCGGA
CGATTCTTCATTGATCAAGAGTACACACTACCCCCCGAGGTCACCCTCTT
CACGACGCAGTCGTTCGTTCGGGATCATGCCGACAAGTGCTTTCCGAAGA
ACCCAAAGGTGGACGTCTTCGGAGGCCCCATGCTGGCCAAGGACGCGGTC
AAAGCTCGGAAGTGGCTCCACGAGCCAGGCGCCCGCATCAGCGCGTGCTT
TACATCACTGGGGGACAGGCGTGAGAAGGGTGCGGACCTTTACGTCAGGA
TCGCGGAGCTGTACCGTTCCACCTACCCTCAAGACAATGTTACCTTCTAC
GGGATCGGGAATGTGATTCCAGCCGTTGACATGGTTGTCTTCGATCCCAT
GCCTCAGCAGCAGCTGGATGCCTTCTACCGAGACGAGGTCGACATCATCT
TCAACCTCGAGCGCACGCAGTATCGCAACGGCTGGCCCCTCGGGGTGGAA
GGCTTGTTGATGGGGCTGGTCCTGTTCACGACGGACGCCTACAACCTGAA
CGACCGGAACGGGTTCAACTTCGGGTCCGAAGTCACCATTGTGACGGAGG
GGCGAGAGGATCTCACTGTGGAGGCCATCCATCGGTACACGTTGAACCGT
CACCTGCTCCTCGAGCATAGCATGCGGGGTCAGGACCGGGCGTGGGAGAT
GTTTGGGCACGACCGACAGATGGGTGTGATCATATCAGAGGTTGGGCGCC
GGATAAAGGCCACCTCAGAGCTTAGGGCAGAATAAACAATTGTCATCACA
CACACATAGATATACAAACACACCGCCAACGGTAGTTTCACCTTTTTCAA
GGACGTTGACGCCGATTAACAATTTGCGTTGCGTGATGAACGACGAGGAA
TGGATGTCAATGTAATTGTAGCTAGAAGAAGTGAAGAGCCTCGACATCAC
AGAATGAAGGGCGTCGACAAAAGGACGGTCACAGATCATAGTCATGTAGG
TATGTTGGCTCTGGTCGTTCGCAGACAAAGCGAGTATGTACCTTCTTACA
ACTTGTGTATCCATAGAAAATAAAATTTATAACTCCATTAGGGGTACCCC
back to topCoding sequence (CDS) from alignment at chr7:1233205..1235504- >NO07G04410.1 ID=NO07G04410.1|Name=NO07G04410.1|organism=Nannochloropsis oceanica|type=CDS|length=1479bp|location=Sequence derived from alignment at chr7:1233205..1235504- (Nannochloropsis oceanica)
ATGAAGGACGCCCTACCTCAGCAGTCAATCACTTTCCAACTTCTCAAAAT
TACAACACATGGTATTAAACGAATGAGAGCCACGGCCTCCCAAGGCATCG
CGGCGTCGTGGAGATGGAGGGCCCTCACTGCGGTAGCCGTAGTGTCTGGA
GCCCTCGCCCTGGCCGCAATGGCGCAGCTGCAGCAAGGGACGACGATCCT
CGAAAGGGGTTGGACGGCTCCTGGAGACAGTCCGAGGGAATCTTCTCAGC
CGTCGCCTCCGCCCCGGAGCCACTGTGAGGTGATCGCCGACCCGACGGTC
CGGCGCCCGAGGGTCCTGGTAACTGACATACTGTTCCCGACACCCTTGTC
GGCCTGGCGCTTAAATGAGCTTACTGCGTGGATGGGCGAGGTCGACCTGG
ACATCCTGGTCACTCGTCGTGCCGACGGGTTCTCCGCGGACTGGGAGCCG
ATCCAAGAGAGCCACTGCCTTGCGGACTACAACGTTTTCGTGTTCACGGA
GGCCCACAGAGGATCCGTGGAGGGCATCAACTCCTTGGCCAACGGGACCT
TCGACACGTCTCCGTTCCTGGGTCACTGGCCTGCGGAGTACCTCCTGCGT
CCGCGGAAGTTCGGGACCTCATCCCCGTCGTTGAAGGACTACGATTGGGT
CCATCACATCTTCCTCAACGCCTACGAGTTCTTCAACAAAGCGCTTCCTG
GCTACCCTCAGCGACAACAGAGCATCCACCTGTACCCCGGCGGACGATTC
TTCATTGATCAAGAGTACACACTACCCCCCGAGGTCACCCTCTTCACGAC
GCAGTCGTTCGTTCGGGATCATGCCGACAAGTGCTTTCCGAAGAACCCAA
AGGTGGACGTCTTCGGAGGCCCCATGCTGGCCAAGGACGCGGTCAAAGCT
CGGAAGTGGCTCCACGAGCCAGGCGCCCGCATCAGCGCGTGCTTTACATC
ACTGGGGGACAGGCGTGAGAAGGGTGCGGACCTTTACGTCAGGATCGCGG
AGCTGTACCGTTCCACCTACCCTCAAGACAATGTTACCTTCTACGGGATC
GGGAATGTGATTCCAGCCGTTGACATGGTTGTCTTCGATCCCATGCCTCA
GCAGCAGCTGGATGCCTTCTACCGAGACGAGGTCGACATCATCTTCAACC
TCGAGCGCACGCAGTATCGCAACGGCTGGCCCCTCGGGGTGGAAGGCTTG
TTGATGGGGCTGGTCCTGTTCACGACGGACGCCTACAACCTGAACGACCG
GAACGGGTTCAACTTCGGGTCCGAAGTCACCATTGTGACGGAGGGGCGAG
AGGATCTCACTGTGGAGGCCATCCATCGGTACACGTTGAACCGTCACCTG
CTCCTCGAGCATAGCATGCGGGGTCAGGACCGGGCGTGGGAGATGTTTGG
GCACGACCGACAGATGGGTGTGATCATATCAGAGGTTGGGCGCCGGATAA
AGGCCACCTCAGAGCTTAGGGCAGAATAA back to top
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