NO07G04100.1, NO07G04100.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO07G04100.1
Unique NameNO07G04100.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length4140
Alignment locationchr7:1146601..1151193 -

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Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr7genomechr7:1146601..1151193 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO07G04100.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO07G04100NO07G04100Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO07G04100.1NO07G04100.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO07G04100.1.cds1NO07G04100.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO07G04100.1.cds2NO07G04100.1.cds2Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO07G04100.1.cds3NO07G04100.1.cds3Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO07G04100.1.cds4NO07G04100.1.cds4Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO07G04100.1 ID=NO07G04100.1|Name=NO07G04100.1|organism=Nannochloropsis oceanica|type=mRNA|length=4140bp
GCATGACTTTATTTTCTGCTGATTCGACCTCGTCATCGACTGCTTCATAC
GTCCGTCAATCTATTTTGCATTTACTTATTCTTTGTTCCTTCAGCTCATT
AACGACAAGGCTTTACCACCTCATCACCACCCACCTCCCGACTGACCCGC
CAGCTCTCTCCCGCCCACCATAACTCATACCAATGCCGGTCGGCTGCACT
CTGAAACGACACCTGGACCACGGGGTGTGGAAACACCCGGACACTCCCCA
CCACTGGTGGCGACGCCCCATGTAGTACCGTGTGATCCGTCACAAGCCAC
GCCTCCTCGCTCGTCCCATCCGCCCTCGATTCCTCAATTATGTGCCCCTT
TCCCTCCGCACTGACATATATCACTTTTTGACAGCCCAAAATCTGCAACT
CATCTCCCCTCCGAACATGAATCCCCGACCGGACCGAGTGGTCAACCAAT
GTGTACTTGAACGACACCCTTTTATCTCCCCCCCTCCCTTCCTTCTCTTG
TGAATAGGACTCATCGAACGAAAACATTATTCGGTATAAGCGTTGGTCAT
GTCCCACATAGCAAACCTCTCTGGCACTCACCGCCACAGGGTCGCCGCCC
AATCTTGGCAGTTCTGGACCGTCGAACGCGACATCCTCTACTTTTAAGGT
GTTTTTCTCGCGCACGATGTCAAAGGACAACATTAACAGCCTGTCCATCT
CCGCGTCTCGCACCCAGGCCCGAGCAAGTGAGTCAGGACTTGCCTTTGAG
GTCGGCGCCCGCCACACAGTGGGGGAACCCCGAATAATGAGTGGGTGATT
AACGACACGTCGGCTCTGAATGTCCGCCTCGACCAAGTGCCCGTCCCACC
CTCCATACACCAGCCACCCCTCTTCTTCCGGACCCAGCGCGCACACCCTT
CCTCCCTCAGCCGCGCGGGGAAACCCCATACATTTCGTCAAATCACGCGT
CAACCAGCCTTCCTCCCCTCCTTCCCCCTTCCCCTCACCCTCCCCATGCT
CCGATCCCCATAAAAGCGAAGGAGGTAGTACATTGCGTCGTCCCACCAGC
ATGACATGCTGCGATGTTTCTTCGATAAAGTAATACACCGTAGGAGCCAG
TGTTGCCCCCTCTCCTACCCTCGGGAGCTGCAACGGCAACACACCCGAAG
GCTTGGAGCACCCTGTTTCATTCACGGCCACTAGGCGATAAAAGAAATCT
GACGGCGGGGAGCGCATTAAGCTCTTGTCCAACACCTGCCCTTGCTCCGG
AACCCAAGAATCTATCACCCCTCTTTCCACCACCATCCAGTCCCCCCCTC
CCCGTCTTTCCCCCCTTCCTCCTCCGTTCTCTATATCGCGACAGCGATGT
AACTCGTAGCTACGGGCGCTGGTGGATCCCCGGAAGGTGAGAAGGCCTTG
GGCTGTCACAGACAAAAGACGTGGTGGGGCAGGCACGGGAAGAGGAAGTG
AGAAAGGGATGGAAGGCAAAGAGACACAGGGTTTGCTGTTGCTATTTTGC
CCTATGCCGCTGTCATGGGAGAAGCAGAGATGGCCGTAGGTGTGCAGCAG
TGACATCATCCCTCTTTCGTCGTAGCGGTCGCCGGAAGGAAAGCCGGGCC
AGTGGTAGGCCCAAAAGACATTGAAACCCCAGGGCTCTTCGTGAAAGTAG
AAGCCACCGCGAAAAGATCGGAAGCGAAGGCTCCAGAGGCAGGCACCAAT
GACGCCTTGTCCAGCTTGGGCTTGAGCAACGAGGGTGGAGAGGAAAGAGG
CCGTGGACGAGAGAGAGGCGAATCCAAACTCACCCACGAAGAAAGGCTTC
TTGCCCTGGCACGCGTGGAGATCAGAGAAGAGGGCATCTACGAAGGATGA
GGGAGGGAGGGTGCATGTGGTGATGGAAGAGAGGATGGGGGAGTCAGCAG
TGCTCCCATCACCCGAAGGATAATAATGACGGGAGACAATGTCAATCGAT
TCCTCGCCCAGCACGCCCGGGTCTACGCCGTGGTGGCCATCAATCACCAA
ATGTCTGCATTCATCCGCCTCCTTGATGATCCTCGCCATGCGAATCGTCC
ATGCAGAGGGACAGTCCAATTCATTTCCCGTTTCCCACGCGAGGATGGTG
GGGTCCTCCCGGTACAATGCACCATTTATTGTATTCCTCCTCCCCACCAC
CGCCCTGATCACCTCGCCCCAATCTTGCAAGCACACATCTTCCTCCCAAA
AAGCCCTTGCGCAGTCCTTGCCTACAAACCCACGCCATCTCGCCATACTT
TCCACTCCACCCACCCATGTCCACTGGTCGATAAGCGGAAGGATTAATCG
AATACCCATTTCTCTTGCCACGTCCAAGGCCTGGTCCAAGACTTGCATGT
ACTGCTCGTTGAGACAGAATTTCTGAGACTTCGGATCCCATTCTACGTGA
CATCGTCGAGCAGGGTCAGGATGGACGATCTTGTCTTCAATGGACAAGGT
ATAGGGCCGCGCCACCCGCCCCCCTTGGTGGAGAACTGAGCGCAAAGCGT
CTGTCTGCTCCCACCGGGTGGGGAGCCGCCAGGGGTCTTGGATAAAGGTT
AGCTCGGGAATATTGAAGGATACAAAGTAGAACGGATAGATCATCGGTGG
TATGGTACAGGTGGGTGCGAGGGCTCGATCCGTGCTTGTGCTGGGAGGGC
TGTCGTCGCTTCCCGGAAGCAGCGAGCGGGAAGAATTCGTGGAGGCTGAT
GCTGTGCTTGTCGTGGCGACGGCATTATCATCTTCATAGAGTACCAGCCC
GCGGCGTTTGATGAACGGGAGGGGTGGAGGCGCAGCCATGGTCGATGGGG
ACCGAAAGCAAAGCGACGAGGAGATAGGCGAGGGGGGAGGTCGAAGCCAA
GGCTACCTTGTGCGGTTTCGCGAGGATGCCTTGAGATTGCGTATAGCTTG
GAGCGTTAATAAAGAACGACAGAAATATGCGATTATGCATAGGCGCTGTT
GTGACGGCATGGCGTTGCGGCTGCCCGATGTTTTTGCGCTCGTCAAGAGG
AGTTCATTACTCACCCTCATATCGGTCGTTTTTGAGTTCGCTCGCGTTGC
TTCAAACTCCAGCGACGCACGGCAAACGCCGCTAAGGTGCCTGTCTTTCT
TAACATATTTCCGAACAAGCCACCCCACCCATTCGCAGACGACAGGCACA
GCAAACTAGAAATTATGCCGCTGTTAAACTTCCTGTGCGCACTGAGTCCC
ATTAAAGCGGCCTCCTACCTAAACCAGACTCCCGCCACCACAGCTCCCCT
TGACACTACAGCAGGACCCTCACCCACCAGCAACGGCGGTGAGAAAAAGC
AAGAGGGAGGAAAGTCCACCTGGGAAAATGCATGGGAGATGAAGCGCATG
CTCAAGGTCACGGAGGAGCTGATGGAGAAAGACGAGATTGCTCGAGGCGA
GAATGTACACAAGCAGCGGGAGGCAATGAAGAAGGAACAAACCCAGCGCA
AGAAACAGGACAAAGCGGAGGCCCTTCGAACTCAGCAAGAAGCCTTTCGT
AATGTCAAGAAACAGCGAGATATAGAGCAAGAAGCCGCCCGGGCCGACAT
CCGCGAAGAATACCGTCGAGCCATGACCACCAAGAAGGAAGCTGAAGCCG
AGCAAAGGGCCACCCGACAACGGGAACGCGAAGAGAAACGACGTGCGCTT
CTCGAGGAACACCGCCGGAAGCAAGAGGAAGAGGACGGGATGAAGGCCAC
GAAGCGGGCAGAAGATCAGGCACGGCTCGCAAAACGACAGGCCGAGGTGG
CGGCGGCGGAGAAGGAGAGGATAAAGAAGGTGCATATGCTGCGGGTATCC
TTAGAGGCCCAGAAAGAGAAGAGGCGGGCTTCCCTGTACACTCCACCAGC
GGGGATGGCCAAGGGGAAGGGAGGCGGACGGCAGGAAGGATGAGAAGGGA
GGGAAGGAAGGAGGGGAGAAGGGTGGGCCATACATGTGTTTTGAATATAT
ATTTTCCACTGTATTTTTCATTTACAAAAGGGATCATAAGCAGTGGCTTG
ACTCGGTGGAAGTAGGAAAGATGATGGAGAGGCACTACGGGGAAGGAAGT
CACTACCTCGTCACTGGCAGACCCAGGCAGGTCAAGAGCCCAAAAGAAGA
AGGAAACGATTAATTGAACGAAAGGAAAAATAGAGCCGAT
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protein sequence of NO07G04100.1

>NO07G04100.1-protein ID=NO07G04100.1-protein|Name=NO07G04100.1|organism=Nannochloropsis oceanica|type=polypeptide|length=243bp
MPLLNFLCALSPIKAASYLNQTPATTAPLDTTAGPSPTSNGGEKKQEGGK
STWENAWEMKRMLKVTEELMEKDEIARGENVHKQREAMKKEQTQRKKQDK
AEALRTQQEAFRNVKKQRDIEQEAARADIREEYRRAMTTKKEAEAEQRAT
RQREREEKRRALLEEHRRKQEEEDGMKATKRAEDQARLAKRQAEVAAAEK
ERIKKVHMLRVSLEAQKEKRRASLYTPPAGMAKGKGGGRQEG*
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mRNA from alignment at chr7:1146601..1151193-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO07G04100.1 ID=NO07G04100.1|Name=NO07G04100.1|organism=Nannochloropsis oceanica|type=mRNA|length=4593bp|location=Sequence derived from alignment at chr7:1146601..1151193- (Nannochloropsis oceanica)
GCATGACTTTATTTTCTGCTGATTCGACCTCGTCATCGACTGCTTCATAC GTCCGTCAATCTATTTTGCATTTACTTATTCTTTGTTCCTTCAGCTCATT AACGACAAGGCTTTACCACCTCATCACCACCCACCTCCCGACTGACCCGC CAGCTCTCTCCCGCCCACCATAACTCATACCAATGCCGGTCGGCTGCACT CTGAAACGACACCTGGACCACGGGGTGTGGAAACACCCGGACACTCCCCA CCACTGGTGGCGACGCCCCATGTAGTACCGTGTGATCCGTCACAAGCCAC GCCTCCTCGCTCGTCCCATCCGCCCTCGATTCCTCAATTATGTGCCCCTT TCCCTCCGCACTGACATATATCACTTTTTGACAGCCCAAAATCTGCAACT CATCTCCCCTCCGAACATGAATCCCCGACCGGACCGAGTGGTCAACCAAT GTGTACTTGAACGACACCCTTTTATCTCCCCCCCTCCCTTCCTTCTCTTG TGAATAGGACTCATCGAACGAAAACATTATTCGGTATAAGCGTTGGTCAT GTCCCACATAGCAAACCTCTCTGGCACTCACCGCCACAGGGTCGCCGCCC AATCTTGGCAGTTCTGGACCGTCGAACGCGACATCCTCTACTTTTAAGGT GTTTTTCTCGCGCACGATGTCAAAGGACAACATTAACAGCCTGTCCATCT CCGCGTCTCGCACCCAGGCCCGAGCAAGTGAGTCAGGACTTGCCTTTGAG GTCGGCGCCCGCCACACAGTGGGGGAACCCCGAATAATGAGTGGGTGATT AACGACACGTCGGCTCTGAATGTCCGCCTCGACCAAGTGCCCGTCCCACC CTCCATACACCAGCCACCCCTCTTCTTCCGGACCCAGCGCGCACACCCTT CCTCCCTCAGCCGCGCGGGGAAACCCCATACATTTCGTCAAATCACGCGT CAACCAGCCTTCCTCCCCTCCTTCCCCCTTCCCCTCACCCTCCCCATGCT CCGATCCCCATAAAAGCGAAGGAGGTAGTACATTGCGTCGTCCCACCAGC ATGACATGCTGCGATGTTTCTTCGATAAAGTAATACACCGTAGGAGCCAG TGTTGCCCCCTCTCCTACCCTCGGGAGCTGCAACGGCAACACACCCGAAG GCTTGGAGCACCCTGTTTCATTCACGGCCACTAGGCGATAAAAGAAATCT GACGGCGGGGAGCGCATTAAGCTCTTGTCCAACACCTGCCCTTGCTCCGG AACCCAAGAATCTATCACCCCTCTTTCCACCACCATCCAGTCCCCCCCTC CCCGTCTTTCCCCCCTTCCTCCTCCGTTCTCTATATCGCGACAGCGATGT AACTCGTAGCTACGGGCGCTGGTGGATCCCCGGAAGGTGAGAAGGCCTTG GGCTGTCACAGACAAAAGACGTGGTGGGGCAGGCACGGGAAGAGGAAGTG AGAAAGGGATGGAAGGCAAAGAGACACAGGGTTTGCTGTTGCTATTTTGC CCTATGCCGCTGTCATGGGAGAAGCAGAGATGGCCGTAGGTGTGCAGCAG TGACATCATCCCTCTTTCGTCGTAGCGGTCGCCGGAAGGAAAGCCGGGCC AGTGGTAGGCCCAAAAGACATTGAAACCCCAGGGCTCTTCGTGAAAGTAG AAGCCACCGCGAAAAGATCGGAAGCGAAGGCTCCAGAGGCAGGCACCAAT GACGCCTTGTCCAGCTTGGGCTTGAGCAACGAGGGTGGAGAGGAAAGAGG CCGTGGACGAGAGAGAGGCGAATCCAAACTCACCCACGAAGAAAGGCTTC TTGCCCTGGCACGCGTGGAGATCAGAGAAGAGGGCATCTACGAAGGATGA GGGAGGGAGGGTGCATGTGGTGATGGAAGAGAGGATGGGGGAGTCAGCAG TGCTCCCATCACCCGAAGGATAATAATGACGGGAGACAATGTCAATCGAT TCCTCGCCCAGCACGCCCGGGTCTACGCCGTGGTGGCCATCAATCACCAA ATGTCTGCATTCATCCGCCTCCTTGATGATCCTCGCCATGCGAATCGTCC ATGCAGAGGGACAGTCCAATTCATTTCCCGTTTCCCACGCGAGGATGGTG GGGTCCTCCCGGTACAATGCACCATTTATTGTATTCCTCCTCCCCACCAC CGCCCTGATCACCTCGCCCCAATCTTGCAAGCACACATCTTCCTCCCAAA AAGCCCTTGCGCAGTCCTTGCCTACAAACCCACGCCATCTCGCCATACTT TCCACTCCACCCACCCATGTCCACTGGTCGATAAGCGGAAGGATTAATCG AATACCCATTTCTCTTGCCACGTCCAAGGCCTGGTCCAAGACTTGCATGT ACTGCTCGTTGAGACAGAATTTCTGAGACTTCGGATCCCATTCTACGTGA CATCGTCGAGCAGGGTCAGGATGGACGATCTTGTCTTCAATGGACAAGGT ATAGGGCCGCGCCACCCGCCCCCCTTGGTGGAGAACTGAGCGCAAAGCGT CTGTCTGCTCCCACCGGGTGGGGAGCCGCCAGGGGTCTTGGATAAAGGTT AGCTCGGGAATATTGAAGGATACAAAGTAGAACGGATAGATCATCGGTGG TATGGTACAGGTGGGTGCGAGGGCTCGATCCGTGCTTGTGCTGGGAGGGC TGTCGTCGCTTCCCGGAAGCAGCGAGCGGGAAGAATTCGTGGAGGCTGAT GCTGTGCTTGTCGTGGCGACGGCATTATCATCTTCATAGAGTACCAGCCC GCGGCGTTTGATGAACGGGAGGGGTGGAGGCGCAGCCATGGTCGATGGGG ACCGAAAGCAAAGCGACGAGGAGATAGGCGAGGGGGGAGGTCGAAGCCAA GGCTACCTTGTGCGGTTTCGCGAGGATGCCTTGAGATTGCGTATAGCTTG GAGCGTTAATAAAGAACGACAGAAATATGCGATTATGCATAGGCGCTGTT GTGACGGCATGGCGTTGCGGCTGCCCGATGTTTTTGCGCTCGTCAAGAGG AGTTCATTACTCACCCTCATATCGGTCGTTTTTGAGTTCGCTCGCGTTGC TTCAAACTCCAGCGACGCACGGCAAACGCCGCTAAGGTGCCTGTCTTTCT TAACATATTTCCGAACAAGCCACCCCACCCATTCGCAGACGACAGGCACA GCAAACTAGAAATTATGCCGCTGTTAAACTTCCTGTGCGCACTGAGTCCC ATTAAAGCGGCCTCCTACCTAAACCAGACTCCCGCCACCACAGCTCCCCT TGACACTACAGCAGGTAAGCGAGGCGTATTCTTCTTGCCACCCTTTATTC ACAAGGCCACCAACAAATTCTGCAAACCCTTTACTGCAACAACCACAAAG GACCCTCACCCACCAGCAACGGCGGTGAGAAAAAGCAAGAGGGAGGAAAG TCCACCTGGGAAAATGCATGGGAGATGAAGCGCATGCTCAAGGTCACGGT GAGTTGTGTATGGTTTGCTGTGTTGAGTCAGTATGCCAGCTTGTCCTATG TAGGGATGGCTTTCCACGTGATAACAGCAAAGCTTGTCCCTGGCACCAGA GAGGCGTAGGCATAGGGTGCCATAGCTGAGGTCTTAGGGAGTGAATGGCC CATCCTACCAGGCATATTCACGCCTTGTATCCTCCCCTCTGAAACCTCAC AACGCAGGAGGAGCTGATGGAGAAAGACGAGATTGCTCGAGGCGAGAATG TACACAAGCAGCGGGAGGCAATGAAGAAGGAACAAACCCAGCGCAAGAAA CAGGACAAAGCGGAGGCCCTTCGAACTCAGCAAGAAGCCTTTCGTAATGT CAAGAAACAGCGAGATATAGAGGTGAGTGATTGGGGAACAATGAAAATAT ACTCAAAGTCTGGTCGTTCGATTGTCCGTTGAGCGTCCCTTTGGCCGCTT TTGCACTGCTCACCTGGTCTCTCCCATCTCCCTCCCACACTTTTTCGCTC TCCCACACCCTTTCCCCCAACCACACAAAGCAAGAAGCCGCCCGGGCCGA CATCCGCGAAGAATACCGTCGAGCCATGACCACCAAGAAGGAAGCTGAAG CCGAGCAAAGGGCCACCCGACAACGGGAACGCGAAGAGAAACGACGTGCG CTTCTCGAGGAACACCGCCGGAAGCAAGAGGAAGAGGACGGGATGAAGGC CACGAAGCGGGCAGAAGATCAGGCACGGCTCGCAAAACGACAGGCCGAGG TGGCGGCGGCGGAGAAGGAGAGGATAAAGAAGGTGCATATGCTGCGGGTA TCCTTAGAGGCCCAGAAAGAGAAGAGGCGGGCTTCCCTGTACACTCCACC AGCGGGGATGGCCAAGGGGAAGGGAGGCGGACGGCAGGAAGGATGAGAAG GGAGGGAAGGAAGGAGGGGAGAAGGGTGGGCCATACATGTGTTTTGAATA TATATTTTCCACTGTATTTTTCATTTACAAAAGGGATCATAAGCAGTGGC TTGACTCGGTGGAAGTAGGAAAGATGATGGAGAGGCACTACGGGGAAGGA AGTCACTACCTCGTCACTGGCAGACCCAGGCAGGTCAAGAGCCCAAAAGA AGAAGGAAACGATTAATTGAACGAAAGGAAAAATAGAGCCGAT
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Coding sequence (CDS) from alignment at chr7:1146601..1151193-

>NO07G04100.1 ID=NO07G04100.1|Name=NO07G04100.1|organism=Nannochloropsis oceanica|type=CDS|length=729bp|location=Sequence derived from alignment at chr7:1146601..1151193- (Nannochloropsis oceanica)
ATGCCGCTGTTAAACTTCCTGTGCGCACTGAGTCCCATTAAAGCGGCCTC
CTACCTAAACCAGACTCCCGCCACCACAGCTCCCCTTGACACTACAGCAG
GACCCTCACCCACCAGCAACGGCGGTGAGAAAAAGCAAGAGGGAGGAAAG
TCCACCTGGGAAAATGCATGGGAGATGAAGCGCATGCTCAAGGTCACGGA
GGAGCTGATGGAGAAAGACGAGATTGCTCGAGGCGAGAATGTACACAAGC
AGCGGGAGGCAATGAAGAAGGAACAAACCCAGCGCAAGAAACAGGACAAA
GCGGAGGCCCTTCGAACTCAGCAAGAAGCCTTTCGTAATGTCAAGAAACA
GCGAGATATAGAGCAAGAAGCCGCCCGGGCCGACATCCGCGAAGAATACC
GTCGAGCCATGACCACCAAGAAGGAAGCTGAAGCCGAGCAAAGGGCCACC
CGACAACGGGAACGCGAAGAGAAACGACGTGCGCTTCTCGAGGAACACCG
CCGGAAGCAAGAGGAAGAGGACGGGATGAAGGCCACGAAGCGGGCAGAAG
ATCAGGCACGGCTCGCAAAACGACAGGCCGAGGTGGCGGCGGCGGAGAAG
GAGAGGATAAAGAAGGTGCATATGCTGCGGGTATCCTTAGAGGCCCAGAA
AGAGAAGAGGCGGGCTTCCCTGTACACTCCACCAGCGGGGATGGCCAAGG
GGAAGGGAGGCGGACGGCAGGAAGGATGA
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Synonyms
Publications