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Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
chr7 | genome | chr7:1106941..1110284 - |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
BLAST of NO07G03980.1 vs.
Match: EWM26963.1 (hypothetical protein Naga_101509g1, partial [Nannochloropsis gaditana]) HSP 1 Score: 468.8 bits (1205), Expect = 2.300e-128 Identity = 230/268 (85.82%), Postives = 247/268 (92.16%), Query Frame = 0
Query: 1 MPFRLNRWGGVHNEEVDRKAIMGLKILLLVAIPTVMASTVFAGMYAWIQGRQYGYTVEDWQRCLVAPNKGGFGVGDQTLFTGSAATFAMKAIVFLILSFNGVNAGLMDHDMLPYALFVSFSGLLGMTIYRESSPIQPEPRAMSVTLVTLTKFIHPHMYADFPVYQAQPDPSLCVHAYHFNLAFLVSQYIMLLLAVGLFSIAVYTLVYSPRDYLDTRLDGSRNAMLLVPVIMTGYVLTLLAKEIVAVDTMQVLQDSQLGYMFMFKKADM 269
MP +LNRWGGVHNEEVDRKAI LKILLLVAIPTVMAST+ A +YAWIQGRQYGYTVEDWQRCLV+PNKGGFGVGDQTLFTGSAATFAMKA+VFLILSFNGVNAGL+DHDMLPYALFVSFSGLLGMT+YRESSPIQPEPR MS TLVTLTKFIHP MYAD P YQ QP+PSLC HA+HFN AFLV QY+MLLL VGLFSIAVYT+ +SPRDYLD RL G+R + LVPVIMTGY+LTLLAKEIVAV+TMQVLQ+SQLGYMFMFKKADM
Sbjct: 1 MPIQLNRWGGVHNEEVDRKAIFALKILLLVAIPTVMASTILATVYAWIQGRQYGYTVEDWQRCLVSPNKGGFGVGDQTLFTGSAATFAMKAVVFLILSFNGVNAGLIDHDMLPYALFVSFSGLLGMTVYRESSPIQPEPRVMSATLVTLTKFIHPRMYADLPAYQGQPEPSLCTHAFHFNQAFLVVQYMMLLLGVGLFSIAVYTIAFSPRDYLDVRLAGTRATLTLVPVIMTGYLLTLLAKEIVAVETMQVLQESQLGYMFMFKKADM 268
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO07G03980.1 ID=NO07G03980.1|Name=NO07G03980.1|organism=Nannochloropsis oceanica|type=mRNA|length=2173bp ACGACTTCAATGGGCCAGGCATTAATCAATCAAGGTAAACCCCGCTCGTA CGGTACGACACAAGAAGTCCAGAACCTAAATCAATTCGAAAAACTATATA AGTACTGGTCTGTAGACGCAAATACAGTCCAGTTGTGCAGGGTTGGTGCA CATGTTTAGGAAAAGGGCAAAAGACTGGGGAAGTCGAGAGTAGGAGAAAG AAAAAAATGAAAATTGAATTTCCCCTGTAGGATGCTATAGAATCTATGAT GATCGGGCTCCTAGGCCCAGACCCACTCATCAACAGGGATAACGAGGAGA ATGGCAATTTCAAGGAGCAGGAGAAGGGCAATGTCAAGGAGGTGGTGGTA CACGGTGGCCTCCCCTCTCTCCTGACACCCTCCTGCTATGACAGTGTGAC AATCCGCCGCCGCCGCTGCCATCCGCCCTACTTCCCCAAAACATGCATAC ATACGCAAACGCATAAACACAGGCGCCTCCCACCAGGCGCGGCATTTAGA GAGAGAGAGAGCCATGCCGTTCCGGCTCAATCGCTGGGGCGGGGTTCACA ATGAAGAGGTGGATAGGAAAGCCATCATGGGGTTGAAAATCTTGCTGCTG GTCGCAATTCCAACCGTCATGGCCTCGACGGTTTTTGCCGGCATGTACGC CTGGATCCAAGGGCGGCAGTACGGATACACAGTCGAAGATTGGCAACGGT GCCTGGTCGCCCCCAACAAAGGAGGCTTTGGCGTTGGGGACCAGACTCTC TTCACGGGATCAGCGGCGACGTTCGCCATGAAGGCCATCGTCTTTCTCAT CCTCTCCTTCAACGGCGTCAATGCCGGGCTGATGGACCACGACATGCTGC CCTACGCTCTCTTTGTCTCCTTTTCAGGCCTCCTGGGAATGACGATCTAT CGCGAATCGTCCCCTATTCAACCTGAGCCTCGTGCCATGAGCGTCACTCT CGTCACGCTCACAAAATTCATCCATCCCCACATGTATGCCGATTTCCCCG TGTATCAAGCTCAGCCTGACCCGAGTCTGTGTGTGCATGCCTATCACTTT AATCTGGCCTTCTTGGTGTCACAATACATCATGCTTCTGTTGGCCGTCGG GCTTTTTTCGATTGCCGTTTACACGCTCGTGTATTCCCCGAGGGATTATC TCGACACGCGGCTGGATGGTTCTAGGAATGCCATGTTGCTGGTACCTGTG ATTATGACGGGTTATGTGCTTACCTTGCTGGCCAAGGAGATCGTGGCGGT GGACACGATGCAGGTCCTCCAAGATTCCCAGCTAGGCTACATGTTCATGT TCAAGAAAGCCGATATGGATGTGATATCGATGACTATGATGGTCACATGC GGTGCTGTCTTGGTCGGCTCCTTCCACGAGTGCAAGAACAAGTTCAGATT AGCCTCTTTCATGGCGTTTTTGCACGTCCTCATCTCCCTCCCCGTCATGG CGGGGACCTTCGCAGCTTACGACTCATTGACTTACCCCTACAAGGGCAGC ACGTACCGGCTCTGGGAGACAGTATCCTGCAAGACGTACATCAACACCAA GAATCTGGGCATCTTCGGTGATTATCCAGGCGAGCTAAACGAGATCTGTC GGGAGGTTCAACTCTCGCTCGTCGGACAGACTATCATCTTCCTGGCCATG TTCTTCCAGATGATCTGCTGCCTCCGCGTCGTCCTCACCAACGAAGGTCC CGTCCGTCCTCCTCACGAGACACGGTGCATGTCCTGCGCATACCGGCAAG AAAGCGAGGGTCTGTTATCCTTTGTGCGGCAGCCCACCATTATGGGGTCT CTGTCCATGTACGCACGGCCCTCCTCCTTCTCACCCTCGCATAAAGCGTC ACCGTATCGATTGAGGCCGGGGGAGGGTGAGGGGGGGGGAGCGATGGACC GACCGTTATTGTCGGAGTGGGGGAACAGCAGTGAAGAGAGCGAGGAGGAC ACGCGAGAGGAGAGGGGAAGGAGGAGGGTTGGAAAGAGGAGGGGGGGGGG GGCGAATGGATGGAGGGAGGACGGAGCAGTGTTGACGGATGATCTGGCCA GGGAAGTGGGCTATGCTGAGGAGGAAGAGAGGGCGTGAGGAGGGGGGGAG GGAGGGGAGGAGGGAAGGGGGAGTACGTAAAGTGTACATAGCTGGCAACT TGGAACCAAAGTAATTAACCCAA back to topprotein sequence of NO07G03980.1 >NO07G03980.1-protein ID=NO07G03980.1-protein|Name=NO07G03980.1|organism=Nannochloropsis oceanica|type=polypeptide|length=525bp MPFRLNRWGGVHNEEVDRKAIMGLKILLLVAIPTVMASTVFAGMYAWIQG RQYGYTVEDWQRCLVAPNKGGFGVGDQTLFTGSAATFAMKAIVFLILSFN GVNAGLMDHDMLPYALFVSFSGLLGMTIYRESSPIQPEPRAMSVTLVTLT KFIHPHMYADFPVYQAQPDPSLCVHAYHFNLAFLVSQYIMLLLAVGLFSI AVYTLVYSPRDYLDTRLDGSRNAMLLVPVIMTGYVLTLLAKEIVAVDTMQ VLQDSQLGYMFMFKKADMDVISMTMMVTCGAVLVGSFHECKNKFRLASFM AFLHVLISLPVMAGTFAAYDSLTYPYKGSTYRLWETVSCKTYINTKNLGI FGDYPGELNEICREVQLSLVGQTIIFLAMFFQMICCLRVVLTNEGPVRPP HETRCMSCAYRQESEGLLSFVRQPTIMGSLSMYARPSSFSPSHKASPYRL RPGEGEGGGAMDRPLLSEWGNSSEESEEDTREERGRRRVGKRRGGGANGW REDGAVLTDDLAREVGYAEEEERA* back to topmRNA from alignment at chr7:1106941..1110284- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO07G03980.1 ID=NO07G03980.1|Name=NO07G03980.1|organism=Nannochloropsis oceanica|type=mRNA|length=3344bp|location=Sequence derived from alignment at chr7:1106941..1110284- (Nannochloropsis oceanica) ACGACTTCAATGGGCCAGGCATTAATCAATCAAGGTAAACCCCGCTCGTA
CGGTACGACACAAGAAGTCCAGAACCTAAATCAATTCGAAAAACTATATA
AGTACTGGTCTGTAGACGCAAATACAGTCCAGTTGTGCAGGGTTGGTGCA
CATGTTTAGGAAAAGGGCAAAAGACTGGGGAAGTCGAGAGTAGGAGAAAG
AAAAAAATGAAAATTGAATTTCCCCTGTAGGATGCTATAGAATCTATGAT
GATCGGGCTCCTAGGCCCAGACCCACTCATCAACAGGGATAACGAGGAGA
ATGGCAATTTCAAGGAGCAGGAGAAGGGCAATGTCAAGGAGGTGGTGGTA
CACGGTGGCCTCCCCTCTCTCCTGACACCCTCCTGCTATGACAGTGTGAC
AATCCGCCGCCGCCGCTGCCATCCGCCCTACTTCCCCAAAACATGCATAC
ATACGCAAACGCATAAACACAGGCGCCTCCCACCAGGCGCGGCATTTAGA
GAGAGAGAGAGCCATGCCGTTCCGGCTCAATCGCTGGGGCGGGGTTCACA
ATGAAGAGGTGGATAGGAAAGCCATCATGGGGTTGAAAATCTTGCTGCTG
GTCGCAATTCCAACCGTCATGGCCTCGACGGTTTTTGCCGGCATGTACGC
CTGGATCCAAGGGCGGCAGTACGGATACACAGTCGAAGATTGGCAACGGT
GCCTGGTCGCCCCCAACAAAGGAGGCTTTGGCGTTGGGGACCAGACTCTC
TTCACGGGATCAGCGGTGCGCGAGGGAGAGGAAGGGTGGAGGGAGAGGGA
GGAGGGAGAGGAAGCATCTCATGATGTAATCGTTTCGTGTCGTCCAATGA
TGCTATGTCGTCACAGGAATTAAACCTCGCTGTTTCCCTCTTGTCCATAC
GAGATTTTCTCAAAGCTTGTCCCCCCCACCCCACTCACCACTCCCCGCTC
CGTTACTTCCTCCCCTCCCCCCCTCCCTCGACACCTACAGGCGACGTTCG
CCATGAAGGCCATCGTCTTTCTCATCCTCTCCTTCAACGGCGTCAATGCC
GGGCTGATGGACCACGACATGCTGCCCTACGCTCTCTTTGTCTCCTTTTC
AGGCCTCCTGGGAATGACGATCTATCGCGAATCGTCCCCTATTCAACCTG
AGCCTCGTGCCATGAGCGTCACTCTCGTCACGCTCACAAAATTCATCCAT
CCCCACATGTATGCCGATTTCCCCGTGTATCAAGCTCAGCCTGACCCGAG
TCTGTGTGTGCATGCCTATCACTTTAATCTGGCCTTCTTGGTGTCACAAT
ACATCATGCTTCTGTTGGCCGTCGGGCTTTTTTCGATTGCCGTTTACACG
CTCGTGTATTCCCCGAGGGATTATCTCGACACGCGGCTGGATGGTTCTAG
GAATGCCATGTTGCTGGTACCTGTGATTATGACGGGTTATGTGCTTACCT
TGCTGGCCAAGGAGATCGTGGCGGTGGACACGATGCAGGTAGGTAGGGAA
GGAGGGAGGGAGGGAGGGCTATGCCATGTGACATGGGAAGCTTTGTTTTC
ACTCCCTCCCTCCCTCCCTCCCTTCCTCTTTCTCCCCCTCAACAGGTCCT
CCAAGATTCCCAGCTAGGCTACATGTTCATGTTCAAGAAAGCCGATATGG
GTACGTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCT
CCCTCCCTTCCTCCCTCCCTCCCTTCCTCCTTCCTTCCTTCCTCAACTCC
CTCTCCCCCCTTTTCTCATTCTTTCATCAACCTTCTCTCCCTCGCCACTT
CCTTTCACGTCAATCCCCACTCCCCTTTCCCCTCCCTCCTTCCCTCCTTC
CCCTCAGATGTGATATCGATGACTATGATGGTCACATGCGGTGCTGTCTT
GGTCGGCTCCTTCCACGAGTGCAAGAACAAGTTCAGATTAGCCTCTTTCA
TGGCGTTTTTGCACGTACGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGC
GGGAGGGAGGGAGGGAGGGAGGGCGAGAAGGCGGGAGAGAAATCTGGCAA
GAGGAACGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAAGGAGTGCAGGAA
GGGAAGAGAGGAAAGGCCAAGCAATTATTCATTTGTGCCATCTATCACTC
CCTCTGAATTCGCACCCCCCCTCCCTCCCTCCCTCCCTCCTTCCCTCCTC
GCTTCCCGTAGGTCCTCATCTCCCTCCCCGTCATGGCGGGGACCTTCGCA
GCTTACGACTCATTGACTTACCCCTACAAGGGCAGCACGTACCGGCTCTG
GGAGACAGTATCCTGCAAGACGTACATCAACACCAAGAATCTGGTGAGCA
CGGGAGGGAGGGAGGGAGGGAGGGAGGGAAATAAAATGAGCGACGGGGAT
TTGATTTGGTGCATGTACTCAATCCCCCTCCCCTCCCTCCTGTCCATCAT
TCTCCCTCTCTCCCTCTCTCCCTCTCTCCCTCTTTACTTCCCTCCCTCCC
TCCCTCTCTGTGCTCCCTCTGCCACTCTCTCACCTCTTCTCCTTCCCTCC
CCCCCCCGCTCTCTCCAGGGCATCTTCGGTGATTATCCAGGCGAGCTAAA
CGAGATCTGTCGGGAGGTTCAACTCTCGCTCGTCGGACAGACTATCATGT
AAGAAGAGAGGGAGGGAGGGAGGGAGGGAGGGAGAGGAGCGAAAAAGAGG
GCAAAATCGAAGGGGGTTAACACCTGGCTTGATCTCATACCGTACTCCCC
CTTCCCTCCCCCCCTCCCTCCCTCCCTCCCTCTATCCCTCCCTCTCTCCC
CCTCCCAGCTTCCTGGCCATGTTCTTCCAGATGATCTGCTGCCTCCGCGT
CGTCCTCACCAACGAAGGTCCCGTCCGTCCTCCTCACGAGACACGGTGCA
TGTCCTGCGCATACCGGCAAGAAAGCGAGGGTCTGTTATCCTTTGTGCGG
CAGCCCACCATTATGGGGTCTCTGTCCATGTACGCACGGCCCTCCTCCTT
CTCACCCTCGCATAAAGCGTCACCGTATCGATTGAGGCCGGGGGAGGGTG
AGGGGGGGGGAGCGATGGACCGACCGTTATTGTCGGAGTGGGGGAACAGC
AGTGAAGAGAGCGAGGAGGACACGCGAGAGGAGAGGGGAAGGAGGAGGGT
TGGAAAGAGGAGGGGGGGGGGGGCGAATGGATGGAGGGAGGACGGAGCAG
TGTTGACGGATGATCTGGCCAGGGAAGTGGGCTATGCTGAGGAGGAAGAG
AGGGCGTGAGGAGGGGGGGAGGGAGGGGAGGAGGGAAGGGGGAGTACGTA
AAGTGTACATAGCTGGCAACTTGGAACCAAAGTAATTAACCCAA back to topCoding sequence (CDS) from alignment at chr7:1106941..1110284- >NO07G03980.1 ID=NO07G03980.1|Name=NO07G03980.1|organism=Nannochloropsis oceanica|type=CDS|length=1575bp|location=Sequence derived from alignment at chr7:1106941..1110284- (Nannochloropsis oceanica) ATGCCGTTCCGGCTCAATCGCTGGGGCGGGGTTCACAATGAAGAGGTGGA TAGGAAAGCCATCATGGGGTTGAAAATCTTGCTGCTGGTCGCAATTCCAA CCGTCATGGCCTCGACGGTTTTTGCCGGCATGTACGCCTGGATCCAAGGG CGGCAGTACGGATACACAGTCGAAGATTGGCAACGGTGCCTGGTCGCCCC CAACAAAGGAGGCTTTGGCGTTGGGGACCAGACTCTCTTCACGGGATCAG CGGCGACGTTCGCCATGAAGGCCATCGTCTTTCTCATCCTCTCCTTCAAC GGCGTCAATGCCGGGCTGATGGACCACGACATGCTGCCCTACGCTCTCTT TGTCTCCTTTTCAGGCCTCCTGGGAATGACGATCTATCGCGAATCGTCCC CTATTCAACCTGAGCCTCGTGCCATGAGCGTCACTCTCGTCACGCTCACA AAATTCATCCATCCCCACATGTATGCCGATTTCCCCGTGTATCAAGCTCA GCCTGACCCGAGTCTGTGTGTGCATGCCTATCACTTTAATCTGGCCTTCT TGGTGTCACAATACATCATGCTTCTGTTGGCCGTCGGGCTTTTTTCGATT GCCGTTTACACGCTCGTGTATTCCCCGAGGGATTATCTCGACACGCGGCT GGATGGTTCTAGGAATGCCATGTTGCTGGTACCTGTGATTATGACGGGTT ATGTGCTTACCTTGCTGGCCAAGGAGATCGTGGCGGTGGACACGATGCAG GTCCTCCAAGATTCCCAGCTAGGCTACATGTTCATGTTCAAGAAAGCCGA TATGGATGTGATATCGATGACTATGATGGTCACATGCGGTGCTGTCTTGG TCGGCTCCTTCCACGAGTGCAAGAACAAGTTCAGATTAGCCTCTTTCATG GCGTTTTTGCACGTCCTCATCTCCCTCCCCGTCATGGCGGGGACCTTCGC AGCTTACGACTCATTGACTTACCCCTACAAGGGCAGCACGTACCGGCTCT GGGAGACAGTATCCTGCAAGACGTACATCAACACCAAGAATCTGGGCATC TTCGGTGATTATCCAGGCGAGCTAAACGAGATCTGTCGGGAGGTTCAACT CTCGCTCGTCGGACAGACTATCATCTTCCTGGCCATGTTCTTCCAGATGA TCTGCTGCCTCCGCGTCGTCCTCACCAACGAAGGTCCCGTCCGTCCTCCT CACGAGACACGGTGCATGTCCTGCGCATACCGGCAAGAAAGCGAGGGTCT GTTATCCTTTGTGCGGCAGCCCACCATTATGGGGTCTCTGTCCATGTACG CACGGCCCTCCTCCTTCTCACCCTCGCATAAAGCGTCACCGTATCGATTG AGGCCGGGGGAGGGTGAGGGGGGGGGAGCGATGGACCGACCGTTATTGTC GGAGTGGGGGAACAGCAGTGAAGAGAGCGAGGAGGACACGCGAGAGGAGA GGGGAAGGAGGAGGGTTGGAAAGAGGAGGGGGGGGGGGGCGAATGGATGG AGGGAGGACGGAGCAGTGTTGACGGATGATCTGGCCAGGGAAGTGGGCTA TGCTGAGGAGGAAGAGAGGGCGTGA back to top
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