NO07G03580.1, NO07G03580.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO07G03580.1
Unique Name	NO07G03580.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	3796
Alignment location	chr7:985022..989832 +

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr7	genome	chr7:985022..989832 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO07G03580.1 vs.
Match: EWM27000.1 (atp-binding cassette sub-family b member mitochondrial [Nannochloropsis gaditana])

HSP 1 Score: 910.2 bits (2351), Expect = 3.800e-261
Identity = 485/607 (79.90%), Postives = 536/607 (88.30%), Query Frame = 0

Query:   69 RPFRVTPTTTRLDEVGTPTIQRPVSLQEMGQLLLQEKKTFGAALTGIGLASACQMCVPYIFGRVVDLLSASVGIGVSTAGASELVSNSVVMEGLRDNAMAMLGVGLVGTMATYASTAQLDIVGQRISMDLRKRLFSNILDQDLAFFDVNKSGELANRLSTDVHEVAEHLVENVSLFLSAAVMATGSAGMLLYISPSLSVVTLSVVPAMVLGAAQYSKIVKKLSLALLNSLAVSTQQAAEKMGAIRIVRHFAAEDREKERYGNIIDMSLGLARKLAVSEGVYVAAIFAVSNFALLGVLFLGAGMVVEGGLTVGGLASYCLYATNLSTAMKEATDGVAGIIRAQGAAGRLYALLETRPKMEKGTTIPPADAIRGRIEFKDVTFAYPTRPHHDVLKGFNLKLDPRENLGVTGPSGCGKSSLALLLTRMYAPQQGRVFLDGFDISTLDPSWLRRTVVVITQEPLLFSGTVRENIAYGMPDASEADITKAAQLSNAHRFITHLPQQYDTQIGERALVLSGGQKQRLAIARAILLKPRVLIVDEGTTALDYSNQQDVLKQLLGECCGSTVILIGHSATALEGSSRLVSLNRDGGIERDEMVGDAELPHVDSDR 676
            R FRVTP  TRLD VG PT QRPVSL+EMG LLLQEKKTF  AL GIG+ASACQ+C+PYIFG VVDLLSA+VG          L SN+ V+ GL++NAMAMLGVGL GT ATYAST+QLDIVGQRISM+LRKRLF NILDQDLAFFDVNKSGELANRLSTDVHEVAEHLVEN+S FL A+VMAT SAGMLLYISPSLSV+TLSVVPA+ LGAAQYSK+VKKLSL+LLNSLA STQ AAEKM  IR+VRHFAAE REKERYG IID SLGLA++LAVSEGVYVAAIFAVSNFALLGVLFLGAG V+EG LTVGGLASYCLYAT+LS AMK+ATDGVAG+IRAQGAAGRLYALLETRP M++G  IPPA+AIRG IEF+DVTFAYPTRP   VL+GFNL L PRENLG+TGPSGCGKSSLALLLTRMYAP QG+V LDG+D+++LDP+WLRRTVVVITQEPLLFSGTVRENIA G P AS A+I +AA L+NAHRFI+ LPQQYDTQIGERALVLSGGQKQRLAIARA+LLKP VL+VDEGTTALD  NQ +VL+QLL EC  STV+LIGHSATALEGS+RLV+LNR G I RDEMV ++ELPHV++ R
Sbjct:   59 RQFRVTPAVTRLD-VGKPTEQRPVSLKEMGHLLLQEKKTFTVALAGIGVASACQLCIPYIFGSVVDLLSATVG-----ENTDALHSNTAVLSGLQENAMAMLGVGLAGTAATYASTSQLDIVGQRISMNLRKRLFGNILDQDLAFFDVNKSGELANRLSTDVHEVAEHLVENISKFLHASVMATASAGMLLYISPSLSVITLSVVPAIALGAAQYSKVVKKLSLSLLNSLAKSTQHAAEKMAGIRVVRHFAAEIREKERYGQIIDESLGLAKRLAVSEGVYVAAIFAVSNFALLGVLFLGAGKVLEGVLTVGGLASYCLYATSLSEAMKDATDGVAGVIRAQGAAGRLYALLETRPLMQRGAIIPPAEAIRGCIEFRDVTFAYPTRPASPVLEGFNLMLKPRENLGITGPSGCGKSSLALLLTRMYAPLQGQVLLDGYDVASLDPAWLRRTVVVITQEPLLFSGTVRENIALGKPSASHAEIVEAATLANAHRFISRLPQQYDTQIGERALVLSGGQKQRLAIARAMLLKPIVLVVDEGTTALDSMNQGEVLRQLLRECKASTVVLIGHSATALEGSTRLVTLNRGGNIVRDEMVRESELPHVNNWR 659

The following BLAST results are available for this feature:

BLAST of NO07G03580.1 vs.

BLAST of NO07G03580.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
EWM27000.1	3.800e-261	79.90	atp-binding cassette sub-family b member mitochond...	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO07G03580	NO07G03580	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO07G03580.1	NO07G03580.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO07G03580.1.cds1	NO07G03580.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO07G03580.1.cds2	NO07G03580.1.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO07G03580.1.cds3	NO07G03580.1.cds3	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO07G03580.1.cds4	NO07G03580.1.cds4	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO07G03580.1.cds5	NO07G03580.1.cds5	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO07G03580.1.cds6	NO07G03580.1.cds6	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO07G03580.1.cds7	NO07G03580.1.cds7	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr7:985022..989832+
coding sequence from alignment at chr7:985022..989832+

mRNA sequence

>NO07G03580.1 ID=NO07G03580.1|Name=NO07G03580.1|organism=Nannochloropsis oceanica|type=mRNA|length=3796bp
CTTCACGTTTCTTTTCTACGGATTCTCGTTCGAATCATCGATTCGCTCCA
CGTTTCTTTTCCTCAGTTTTGCCTTTAAAATTATTTCTTCATTTGAAAGT
TCTTATGCGCCTGCTATTGGCGCGATACCATTCTGTGCTTTAAGTCGCTG
CCCTTCCTAATGCTTCTTTTTCTATGCTTGTTTGGCTTCTGACTTATTTC
GTTCGGTCTCTTTATCCACTTTTTCCTATTTTGTCGTCTCGTCCGCCGTG
TCTTTGCCTTTTGGAGGCTGTATCACAGCTTTGGGGACAATGCAACAATC
CGAGAGATGTGTAATGGAGGGATGAACGGAGGATTTGTTGCAGCGGTTGC
TGTCGGTGTACCACCACCCAAGTTCTGTCAAGTATTCGACTTTTTCTTCG
TTGTTTGTCGCCCATTTCATGTGATATAGATAAAGGGTATCTTTCCGCTT
GCCTGTCACCATTTCTGCCATAAGACCTTTGAGTTGATGGTAGGCCTTGC
CCGTCGGAAGGGCATCAAACGGCCAATTTTTTAATGGACAGACTGTTTCG
CAAATAATGGTCTTCCAAGAAATACGAGATCATCGCCCTGTGAATTCCCC
AACTCAATACCCTGTCAAGCGAAAACAACATCGCCTGCAGCAGAAGAGCG
TGTCGGCCCATTTGCTCGTACGAAGGAAAATCCCGAATTCCCAAAAAAAG
AAGCAAAACTAACACTTGTCGCTCCATCGTCCTGCATCAAAATATCGACC
CCTTTGTCCTCCTCCTTCTTAAAAAAGACATGGGTATCCTTGAACATCAC
CTTGTCCTCATCCTTCTTAAAAAAGACATGGGTATCCTTGAACATCACCA
AGTCCAAGTCTAGATACAACTATTCGTAAACAGAATCGATTGACCAACCA
TCCGGCCGCTGACTTCAGCCACATCATGTCTTTGTCGAGAGATAAATGGA
GAAGAGCTCAGCCATAACTCTGTCAACACGGAGGGTGGCGATCTGGGTGT
ATCCTGTTTGATATTGCACGGCCGGAAAGCGCGTGGCCAGTCCGTCTTCG
TGATGCTGCTGAAAATTGATGCTACTGGTGCAGATTGAGAAGCTGATGCG
GCAGCATTTGCGGCCTTCATCTTCAGTTCCTTAGCTTCTGTCCTGAGATT
CTTGATCTGAAGCGCCGCCGCCATCTCCTTCTTTTCGTCTCCTTCCTCTC
TCGCTTCTCCTTTTCCGGAAGCTTGTGCCAATTATCTCGCTTCCCGACCT
TTTTTTCCGGTCGACAAAGTACATGCCGAAAGTCACTCTCAACGTAAAGA
TGACGACCAAGATCATCAAATCAGAATATTCATCTTGGTAGTCCGCCCCC
TGGCCGAATGGGTGCGTATGTTAGGTGGTGGCTGGGGTGCATGGCTCAAG
TTTTGAATGCAGGGCGTGGAAGGTGAGGATGGGCCTTGCGTTCCTCGCAG
CGATACAGCAACGTCCTGGCGAGTACGTTTGCTCTCACTGCCGCTGCCCC
TTCATGCATGTCCCACGTCTGTGATCTTGTGCCTTGAGAAGGAGAGTATG
CTTGGGATGAGTACTTGGGATATGGAGCAAAGAGAGGCGATGTCATTTAC
GTCGGCAGTCGTTAATTTCTTCGATGATGTGTTGTTCAACAAGTTGTGTT
CCATGCTTAGTTTAATTTGTGCCCATATTTTTCTCGTCCTCACCCACGCT
CACGAAGCCTACGATGACCCAAAACTGAAATGGACAGTAGATAGACTTAA
GCGCAAGAAATGTTGCTTCTGCATCGGGGGTTTTGGATCGGGAGCCTTTC
ATTGGCTGTGGCACGAGGCACTATTATCAGGCCTCGGCATGCGTCGTCTT
TTGCCGTCCCATTACGCATGGCCGTCAAGATCACATTGCCTCCGGGCAAG
CAGCAGCAGCGGCATAAGCAGCAGCCATCACCAGCACCCGAATCACCCCT
TCTGCCTTCCCGACGGCCCTTTCGCGTGACCCCCACTACGACGCGCCTCG
ACGAGGTAGGGACACCCACGATTCAACGCCCTGTCTCCCTCCAAGAGATG
GGGCAGCTTTTGCTGCAGGAAAAAAAAACATTCGGGGCGGCCTTGACGGG
TATTGGGCTGGCTTCTGCCTGCCAAATGTGCGTCCCTTACATCTTCGGAA
GAGTAGTGGATTTGTTGTCGGCGTCGGTGGGTATCGGTGTGAGCACGGCC
GGCGCCAGTGAGCTAGTGAGCAATTCTGTTGTGATGGAGGGACTACGAGA
CAATGCAATGGCCATGCTTGGCGTGGGGTTGGTAGGGACGATGGCCACAT
ACGCGAGCACGGCTCAGTTGGACATAGTGGGACAGCGGATCTCGATGGAC
TTACGGAAGCGTTTGTTTAGCAACATTCTGGATCAAGACCTCGCCTTCTT
CGACGTGAACAAATCGGGCGAGCTGGCCAATCGCCTCTCGACTGACGTTC
ACGAGGTCGCGGAGCACCTGGTAGAAAACGTTTCACTGTTCCTGTCGGCG
GCCGTTATGGCCACAGGAAGTGCCGGCATGCTATTGTATATCTCGCCTTC
CCTGAGTGTTGTCACTCTTTCCGTTGTTCCCGCCATGGTGTTGGGCGCGG
CACAATATTCTAAAATCGTCAAGAAATTGAGCCTTGCCCTGTTGAACAGC
TTAGCAGTGAGCACCCAGCAGGCGGCAGAAAAAATGGGTGCCATCCGAAT
TGTTCGTCACTTTGCTGCCGAGGACCGGGAGAAAGAGAGATACGGGAATA
TCATTGATATGTCTCTGGGGCTGGCGAGGAAACTTGCGGTCTCGGAGGGG
GTGTATGTGGCGGCGATCTTCGCAGTGTCGAATTTTGCGTTGCTGGGGGT
GTTGTTTTTAGGGGCGGGAATGGTAGTGGAGGGGGGGCTGACGGTGGGGG
GCTTGGCGAGTTATTGCTTGTATGCGACTAATTTGAGTACAGCAATGAAG
GAGGCGACAGACGGCGTGGCGGGTATAATCAGGGCTCAAGGCGCTGCTGG
ACGTCTGTATGCGCTCTTGGAGACACGGCCGAAGATGGAGAAAGGGACCA
CCATCCCTCCCGCGGACGCGATTCGAGGGAGGATTGAGTTCAAGGACGTG
ACTTTCGCTTATCCAACCAGGCCGCATCATGATGTACTGAAGGGTTTTAA
CTTGAAGCTCGACCCCCGCGAGAACCTCGGAGTCACGGGTCCCAGTGGCT
GTGGGAAGAGCTCCCTCGCCCTCCTCCTGACCCGGATGTATGCCCCCCAA
CAAGGCCGGGTTTTCCTGGACGGATTCGATATCTCCACGTTGGATCCTTC
GTGGTTGAGGAGGACGGTGGTGGTGATCACCCAGGAGCCCCTCCTCTTCT
CAGGCACGGTCCGGGAGAATATCGCCTACGGCATGCCCGATGCGTCCGAA
GCGGACATTACCAAGGCAGCACAACTTAGCAATGCCCATAGATTCATCAC
GCATTTGCCCCAGCAGTATGATACCCAGATCGGAGAGAGGGCGCTCGTTT
TGTCGGGGGGGCAGAAGCAAAGGTTGGCCATTGCGAGAGCTATATTGTTG
AAGCCTCGGGTGCTTATCGTGGATGAAGGAACGACAGCGTTGGATTATTC
TAACCAACAAGACGTACTCAAACAGCTTCTGGGGGAATGCTGCGGGAGCA
CGGTTATTTTGATCGGCCATTCAGCCACTGCCTTGGAGGGCTCCTCTCGG
CTGGTGAGCCTGAACAGGGACGGGGGGATAGAGAGAGATGAGATGGTGGG
GGATGCTGAGTTGCCGCATGTTGACAGTGACAGATATTAGGGAGAA

protein sequence of NO07G03580.1

>NO07G03580.1-protein ID=NO07G03580.1-protein|Name=NO07G03580.1|organism=Nannochloropsis oceanica|type=polypeptide|length=677bp
MLLLHRGFWIGSLSLAVARGTIIRPRHASSFAVPLRMAVKITLPPGKQQQ
RHKQQPSPAPESPLLPSRRPFRVTPTTTRLDEVGTPTIQRPVSLQEMGQL
LLQEKKTFGAALTGIGLASACQMCVPYIFGRVVDLLSASVGIGVSTAGAS
ELVSNSVVMEGLRDNAMAMLGVGLVGTMATYASTAQLDIVGQRISMDLRK
RLFSNILDQDLAFFDVNKSGELANRLSTDVHEVAEHLVENVSLFLSAAVM
ATGSAGMLLYISPSLSVVTLSVVPAMVLGAAQYSKIVKKLSLALLNSLAV
STQQAAEKMGAIRIVRHFAAEDREKERYGNIIDMSLGLARKLAVSEGVYV
AAIFAVSNFALLGVLFLGAGMVVEGGLTVGGLASYCLYATNLSTAMKEAT
DGVAGIIRAQGAAGRLYALLETRPKMEKGTTIPPADAIRGRIEFKDVTFA
YPTRPHHDVLKGFNLKLDPRENLGVTGPSGCGKSSLALLLTRMYAPQQGR
VFLDGFDISTLDPSWLRRTVVVITQEPLLFSGTVRENIAYGMPDASEADI
TKAAQLSNAHRFITHLPQQYDTQIGERALVLSGGQKQRLAIARAILLKPR
VLIVDEGTTALDYSNQQDVLKQLLGECCGSTVILIGHSATALEGSSRLVS
LNRDGGIERDEMVGDAELPHVDSDRY*

mRNA from alignment at chr7:985022..989832+

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO07G03580.1 ID=NO07G03580.1|Name=NO07G03580.1|organism=Nannochloropsis oceanica|type=mRNA|length=4811bp|location=Sequence derived from alignment at chr7:985022..989832+ (Nannochloropsis oceanica)
CTTCACGTTTCTTTTCTACGGATTCTCGTTCGAATCATCGATTCGCTCCA
CGTTTCTTTTCCTCAGTTTTGCCTTTAAAATTATTTCTTCATTTGAAAGT
TCTTATGCGCCTGCTATTGGCGCGATACCATTCTGTGCTTTAAGTCGCTG
CCCTTCCTAATGCTTCTTTTTCTATGCTTGTTTGGCTTCTGACTTATTTC
GTTCGGTCTCTTTATCCACTTTTTCCTATTTTGTCGTCTCGTCCGCCGTG
TCTTTGCCTTTTGGAGGCTGTATCACAGCTTTGGGGACAATGCAACAATC
CGAGAGATGTGTAATGGAGGGATGAACGGAGGATTTGTTGCAGCGGTTGC
TGTCGGTGTACCACCACCCAAGTTCTGTCAAGTATTCGACTTTTTCTTCG
TTGTTTGTCGCCCATTTCATGTGATATAGATAAAGGGTATCTTTCCGCTT
GCCTGTCACCATTTCTGCCATAAGACCTTTGAGTTGATGGTAGGCCTTGC
CCGTCGGAAGGGCATCAAACGGCCAATTTTTTAATGGACAGACTGTTTCG
CAAATAATGGTCTTCCAAGAAATACGAGATCATCGCCCTGTGAATTCCCC
AACTCAATACCCTGTCAAGCGAAAACAACATCGCCTGCAGCAGAAGAGCG
TGTCGGCCCATTTGCTCGTACGAAGGAAAATCCCGAATTCCCAAAAAAAG
AAGCAAAACTAACACTTGTCGCTCCATCGTCCTGCATCAAAATATCGACC
CCTTTGTCCTCCTCCTTCTTAAAAAAGACATGGGTATCCTTGAACATCAC
CTTGTCCTCATCCTTCTTAAAAAAGACATGGGTATCCTTGAACATCACCA
AGTCCAAGTCTAGATACAACTATTCGTAAACAGAATCGATTGACCAACCA
TCCGGCCGCTGACTTCAGCCACATCATGTCTTTGTCGAGAGATAAATGGA
GAAGAGCTCAGCCATAACTCTGTCAACACGGAGGGTGGCGATCTGGGTGT
ATCCTGTTTGATATTGCACGGCCGGAAAGCGCGTGGCCAGTCCGTCTTCG
TGATGCTGCTGAAAATTGATGCTACTGGTGCAGATTGAGAAGCTGATGCG
GCAGCATTTGCGGCCTTCATCTTCAGTTCCTTAGCTTCTGTCCTGAGATT
CTTGATCTGAAGCGCCGCCGCCATCTCCTTCTTTTCGTCTCCTTCCTCTC
TCGCTTCTCCTTTTCCGGAAGCTTGTGCCAATTATCTCGCTTCCCGACCT
TTTTTTCCGGTCGACAAAGTACATGCCGAAAGTCACTCTCAACGTAAAGA
TGACGACCAAGATCATCAAATCAGAATATTCATCTTGGTAGTCCGCCCCC
TGGCCGAATGGGTGCGTATGTTAGGTGGTGGCTGGGGTGCATGGCTCAAG
TTTTGAATGCAGGGCGTGGAAGGTGAGGATGGGCCTTGCGTTCCTCGCAG
CGATACAGCAACGTCCTGGCGAGTACGTTTGCTCTCACTGCCGCTGCCCC
TTCATGCATGTCCCACGTCTGTGATCTTGTGCCTTGAGAAGGAGAGTATG
CTTGGGATGAGTACTTGGGATATGGAGCAAAGAGAGGCGATGTCATTTAC
GTCGGCAGTCGTTAATTTCTTCGATGATGTGTTGTTCAACAAGTTGTGTT
CCATGCTTAGTTTAATTTGTGCCCATATTTTTCTCGTCCTCACCCACGCT
CACGAAGCCTACGATGACCCAAAACTGAAATGGACAGTAGATAGACTTAA
GCGCAAGAAATGTTGCTTCTGCATCGGGGGTTTTGGATCGGGAGCCTTTC
ATTGGCTGTGGCACGAGGCACTATTATCAGGCCTCGGCATGCGTCGTCTT
TTGCCGTCCCATTACGCATGGCCGTCAAGATCACATTGCCTCCGGGCAAG
CAGCAGCAGCGGCATAAGCAGCAGCCATCACCAGCACCCGAATCACCCCT
TCTGCCTTCCCGACGGCCCTTTCGCGTGACCCCCACTACGACGCGCCTCG
ACGAGGTAGGGACACCCACGATTCAACGCCCTGTCTCCCTCCAAGAGATG
GGGCAGCTTTTGCTGCAGGAAAAAAAAACATTCGGGGCGGCCTTGACGGG
TATTGGGCTGGCTTCTGCCTGCCAAATGTGCGTCCCTTACATCTTCGGAA
GAGTAGTGGATTTGTTGTCGGCGTCGGTGGGTATCGGTGTGAGCACGGCC
GGCGCCAGTGAGCTAGTGAGCAATTCTGTTGTGATGGAGGGACTACGAGA
CAATGCAATGGCCATGCTTGGCGTGGGGTTGGTAGGGACGATGGCCACAT
ACGCGAGCACGGCTCAGTTGGACATAGTGGGACAGCGGATCTCGATGGAC
TTACGGAAGCGTTTGTTTAGCAACATTGTACGTAATAGTGGAGGGAGGGA
GGGGAGGGAAGGGGGGGGAAAGGACGAGGCGGATGGAGCAAGGACAAATC
CGTCTCTTGGCAGAGGTGTATCTGTAATATTCATGTCGATGCGTGGAGTT
TCCATGGAGGGACGGGCTGAGAGCTGAGAAAGAAAGCAAGAAAGTAACAT
AAGAGAAGGTGGATCAACTTCCCTCTTCCTTTTCCAAAAACTCATCCACA
CCTTTCTTCCCTTTCCTCTCTCTCTCCTTTCACTTCCTCCCTTCCTCTAC
TTCTGCAGCTGGATCAAGACCTCGCCTTCTTCGACGTGAACAAATCGGGC
GAGCTGGCCAATCGCCTCTCGACTGACGTTCACGAGGTCGCGGAGCACCT
GGTAGAAAACGTTTCACTGTTCCTGTCGGCGGCCGTTATGGCCACAGGAA
GTGCCGGCATGCTATTGTATATCTCGCCTTCCCTGAGTGTTGTCACTCTT
TCCGTTGTTCCCGCCATGGTGTTGGGCGCGGCACAATATTCTAAAATCGT
CAAGAAATTGAGCCTTGCCCTGTTGAACAGCTTAGCAGTGAGCACCCAGC
AGGCGGCAGAAAAAATGGGTGCCATCCGAATTGTTCGTCACTTTGCTGCC
GAGGACCGGGAGAAAGAGAGATACGGGAATATCATTGATATGTCTCTGGG
GCTGGCGAGGAAACTTGCGGTCTCGGAGGGGGTGTATGTGGCGGCGATCT
TCGCAGTGTCGAATTTTGCGTTGCTGGGGGTGTTGTTTTTAGGGGCGGGA
ATGGTAGTGGAGGGGGGGCTGACGGTGGGGGGCTTGGCGAGTTATTGCTT
GTATGCGACTAATTTGAGTACAGGTGAGTAGGGGAGGGAGGGTTGTGATT
AGAGAGTGTATGGGGGGGTGGGTGAATAAATGAGGCATTCACAGCAGCAC
GGGCGGCCAGTGCATGGGCTTGCTCGACTTAATCATTCGATCTCTCAAGA
CTCTTGATTTAAGCTTTCCAACGCCCACGCATGTACACAGCAATGAAGGA
GGCGACAGACGGCGTGGCGGGTATAATCAGGGCTCAAGGCGCTGCTGGAC
GTCTGTATGCGCTCTTGGAGACACGGCCGAAGATGGAGAAAGGTGAGGAA
AGAAGGGACGGAAGGCGGGAGGAGAAGGAGCGGTGAGATACAGTCATGAC
CCAGAATCTGAATCTTAAACGGAAGGATTCAGGAGTCAATTTCATCTCAT
TCGCATTCCTTCCCCTGTTTATCTGCTCACCCCCTTTCCCCCAACACTAC
CCACAACGCCAAGGGACCACCATCCCTCCCGCGGACGCGATTCGAGGGAG
GATTGAGTTCAAGGACGTGACTTTCGCTTATCCAACCAGGCCGCATCATG
ATGTACTGAAGGGTTTTAACTTGAAGGTATCTTTTTTTGTGAGGTGATGA
GGCCGGGGGGCTTAGGAGGGGAAGAGCCTGTGTGTAGATGCATCTGTCTG
TTTCCGCCTTCCTCCCACTTCAGCATTCGCGAGTACTTCATTCGAACGCA
GCCTTATCTCCCTCTTTCTTTACTTTCTCCATCCTTCCCTTCCTTCCTCC
GTCCCTCCAAGCTCGACCCCCGCGAGAACCTCGGAGTCACGGGTCCCAGT
GGCTGTGGGAAGAGCTCCCTCGCCCTCCTCCTGACCCGGATGTATGCCCC
CCAACAAGGCCGGGTTTTCCTGGACGGATTCGATATCTCCACGTTGGATC
CTTCGTGGTTGAGGAGGACGGTGGTGGTGATCACCCAGGAGGTGAGGGAG
AGAATGCGGCGCACCGCAAGTGAGTCATTTTCATCGAGTTTCACCTTTTC
TCCCTCCCTCCCTCCTTCAGCCCCTCCTCTTCTCAGGCACGGTCCGGGAG
AATATCGCCTACGGCATGCCCGATGCGTCCGAAGCGGACATTACCAAGGC
AGCACAACTTAGCAATGCCCATAGATTCATCACGCATTTGCCCCAGCAGT
ATGATACCCAGATCGGAGAGAGGGCGCTCGTTTTGTCGGGGGGGCAGAAG
CAAAGGTTGGCCATTGCGAGAGCTATATTGTTGAAGCCTCGGGTGCTTAT
CGTGGATGAAGGTATGGCGAGAAAGGTGGTAAAAAAGGGAGAGAGAAGAG
GGGAGGACACCATGCACAACACAATAACATCTGAAGGGGGGAAATCAATA
TTATTAAAGTCCTTCACTCTTTTTTATTTCTATCGCTACTCAGGAACGAC
AGCGTTGGATTATTCTAACCAACAAGACGTACTCAAACAGCTTCTGGGGG
AATGCTGCGGGAGCACGGTTATTTTGATCGGCCATTCAGCCACTGCCTTG
GAGGGCTCCTCTCGGCTGGTGAGCCTGAACAGGGACGGGGGGATAGAGAG
AGATGAGATGGTGGGGGATGCTGAGTTGCCGCATGTTGACAGTGACAGAT
ATTAGGGAGAA

Coding sequence (CDS) from alignment at chr7:985022..989832+

>NO07G03580.1 ID=NO07G03580.1|Name=NO07G03580.1|organism=Nannochloropsis oceanica|type=CDS|length=2031bp|location=Sequence derived from alignment at chr7:985022..989832+ (Nannochloropsis oceanica)
ATGTTGCTTCTGCATCGGGGGTTTTGGATCGGGAGCCTTTCATTGGCTGT
GGCACGAGGCACTATTATCAGGCCTCGGCATGCGTCGTCTTTTGCCGTCC
CATTACGCATGGCCGTCAAGATCACATTGCCTCCGGGCAAGCAGCAGCAG
CGGCATAAGCAGCAGCCATCACCAGCACCCGAATCACCCCTTCTGCCTTC
CCGACGGCCCTTTCGCGTGACCCCCACTACGACGCGCCTCGACGAGGTAG
GGACACCCACGATTCAACGCCCTGTCTCCCTCCAAGAGATGGGGCAGCTT
TTGCTGCAGGAAAAAAAAACATTCGGGGCGGCCTTGACGGGTATTGGGCT
GGCTTCTGCCTGCCAAATGTGCGTCCCTTACATCTTCGGAAGAGTAGTGG
ATTTGTTGTCGGCGTCGGTGGGTATCGGTGTGAGCACGGCCGGCGCCAGT
GAGCTAGTGAGCAATTCTGTTGTGATGGAGGGACTACGAGACAATGCAAT
GGCCATGCTTGGCGTGGGGTTGGTAGGGACGATGGCCACATACGCGAGCA
CGGCTCAGTTGGACATAGTGGGACAGCGGATCTCGATGGACTTACGGAAG
CGTTTGTTTAGCAACATTCTGGATCAAGACCTCGCCTTCTTCGACGTGAA
CAAATCGGGCGAGCTGGCCAATCGCCTCTCGACTGACGTTCACGAGGTCG
CGGAGCACCTGGTAGAAAACGTTTCACTGTTCCTGTCGGCGGCCGTTATG
GCCACAGGAAGTGCCGGCATGCTATTGTATATCTCGCCTTCCCTGAGTGT
TGTCACTCTTTCCGTTGTTCCCGCCATGGTGTTGGGCGCGGCACAATATT
CTAAAATCGTCAAGAAATTGAGCCTTGCCCTGTTGAACAGCTTAGCAGTG
AGCACCCAGCAGGCGGCAGAAAAAATGGGTGCCATCCGAATTGTTCGTCA
CTTTGCTGCCGAGGACCGGGAGAAAGAGAGATACGGGAATATCATTGATA
TGTCTCTGGGGCTGGCGAGGAAACTTGCGGTCTCGGAGGGGGTGTATGTG
GCGGCGATCTTCGCAGTGTCGAATTTTGCGTTGCTGGGGGTGTTGTTTTT
AGGGGCGGGAATGGTAGTGGAGGGGGGGCTGACGGTGGGGGGCTTGGCGA
GTTATTGCTTGTATGCGACTAATTTGAGTACAGCAATGAAGGAGGCGACA
GACGGCGTGGCGGGTATAATCAGGGCTCAAGGCGCTGCTGGACGTCTGTA
TGCGCTCTTGGAGACACGGCCGAAGATGGAGAAAGGGACCACCATCCCTC
CCGCGGACGCGATTCGAGGGAGGATTGAGTTCAAGGACGTGACTTTCGCT
TATCCAACCAGGCCGCATCATGATGTACTGAAGGGTTTTAACTTGAAGCT
CGACCCCCGCGAGAACCTCGGAGTCACGGGTCCCAGTGGCTGTGGGAAGA
GCTCCCTCGCCCTCCTCCTGACCCGGATGTATGCCCCCCAACAAGGCCGG
GTTTTCCTGGACGGATTCGATATCTCCACGTTGGATCCTTCGTGGTTGAG
GAGGACGGTGGTGGTGATCACCCAGGAGCCCCTCCTCTTCTCAGGCACGG
TCCGGGAGAATATCGCCTACGGCATGCCCGATGCGTCCGAAGCGGACATT
ACCAAGGCAGCACAACTTAGCAATGCCCATAGATTCATCACGCATTTGCC
CCAGCAGTATGATACCCAGATCGGAGAGAGGGCGCTCGTTTTGTCGGGGG
GGCAGAAGCAAAGGTTGGCCATTGCGAGAGCTATATTGTTGAAGCCTCGG
GTGCTTATCGTGGATGAAGGAACGACAGCGTTGGATTATTCTAACCAACA
AGACGTACTCAAACAGCTTCTGGGGGAATGCTGCGGGAGCACGGTTATTT
TGATCGGCCATTCAGCCACTGCCTTGGAGGGCTCCTCTCGGCTGGTGAGC
CTGAACAGGGACGGGGGGATAGAGAGAGATGAGATGGTGGGGGATGCTGA
GTTGCCGCATGTTGACAGTGACAGATATTAG

Synonyms

Publications