NO07G02540.1, NO07G02540.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO07G02540.1
Unique Name	NO07G02540.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	3825
Alignment location	chr7:732693..736517 -

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr7	genome	chr7:732693..736517 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO07G02540.1 vs.
Match: EWM27093.1 (hypothetical protein Naga_100046g4 [Nannochloropsis gaditana])

HSP 1 Score: 251.9 bits (642), Expect = 1.100e-62
Identity = 268/758 (35.36%), Postives = 366/758 (48.28%), Query Frame = 0

Query:  553 VQSPPSSTVSSSGDLTKAVSSQAAAAAARAAARAAAVATAAAIAVSSSASSSRERPFSASAAAAVPSSSLSSSFSSSSSCVSAPSLSAAERKKEPEGDSLFSISLPLLTGARRGWGADSACSRHRPELRSGHGQGNEKEDEGRTQVRRRMLALSSTGDDIRRDSESGSSSSSMNGTG-MREGRKGNCSNSASSSASLSSRAMVTTAFPTSPKSVLEVLAMASSSPTSFAASLASCSSSISSFRPASSRGQIPFHFSMSSDEEQEQEQEVAEAAERGLSPSRPPPPTARLPHLYSPLQPAASLPQSEEGRKKGLTTHRTFEGLLQESDVEVSRRNSAPSSNSSSFSPSSISSSSTLSPSAPSPSYPNKPTCITTIAATTAARPSPPVMPDVSLPITWREVLVGCAASRELQLRNCRPGPCIVHVAFTFHHQEDEDEEGGEAKREKEGCFHVSSCGKVREKDGEVVGADGILRLLITFLPVHSGLHRATLHLRVGVPVEEGRGAGEGKRGGGREEGMYDVDLVGTATDGE-------VGTAGGIGGVVKT------PLQLEVNFSDRSAKNRYLRRLYPS---RKGKDAAV----AVGAKSLRISDESP--MSPTHSTPTQPSSSNSAFLSSSSGTPGVGFAQTFINFGKQPLGSVNIQRVRLCNPLSAPQLVVLESASLPFVLAHRVIKLRPKAFVKLPLRFVPVHRGEFAVTLRANVHALHGEGQGIK------NGGSSR-------DITLELRGQVE 1275
            +++P   +   S     A ++  AAAAAR AA+ A  ATAAAIA+SSS++SS      A+  + +P +S+++S ++ +   SA  L+  +++ E         S P      RGWGAD++CSRHRPELR G G                             D+E G SS      G M +G    C         +  +A V    P   KSVL+VLA+ASS  ++ ++ +     S SS      R  +   F   S +EQ            G S     PP   LP+LYSPLQ           R++    HR     L E +   SR++   +  + + +P S  S+ +L     + +    PT  +    +T A  +PPV     + I WR + VGCAA R+L LRN RPGPCIVH+AFT H  E              GC+ VSS  K RE+D EVVG+DG+LRLL+TF P   GLHRATLH+RV  P             GG ++ ++DV+LVG A   E           GG      T      P  LE   S    K+  ++         KG+   +    +VG   +   DES   MS +H   T P      FL S      V FAQ  ++FG  P+GSV+++RVRLCNP + PQLVVLE ASLPFVL HRVIKLRP+A+V+LP+RF+PV +GE+  TLRA+VH +  + + I       + G  R        I LELRGQ E
Sbjct:  506 IRTPSDLSAELSPVAAAAAAAAIAAAAARVAAKNAEEATAAAIAMSSSSTSS------ATRLSPLPDASVTASSATCAPPTSA--LTVTQQRHEN--------SAPACILNPRGWGADASCSRHRPELRGGQGT----------------------------DAEGGDSSVVREALGAMSKGETKEC---------VGGQAKVVAPSPNL-KSVLDVLAVASSQTSASSSPVFLLKESPSS--EEERRAPLSCSFLEGSSKEQHA----------GCSAPLAAPPLPELPNLYSPLQC----------RRRATGEHRDVGASLSELERAASRKSCPENGRTCALAPRS-GSTLSLRQMEQADARTGIPTSDSNARDSTTAT-APPVEDSDPVCIAWRGLPVGCAAPRDLYLRNSRPGPCIVHIAFTHHEGEG-------------GCYQVSSSNKEREEDEEVVGSDGVLRLLVTFRPRRPGLHRATLHVRVSRP-----------HRGGHKDAVHDVELVGLAIVPEGLNGRTAYARVGGEASRAYTGHNREQPEGLE-KLSGIGRKSHDVKNFLAESEREKGRGGGMKPPSSVGGGKIGARDESDPCMSLSHPPSTIPH-----FLQSH-----VAFAQGLLSFGNHPVGSVSVERVRLCNPSTVPQLVVLERASLPFVLTHRVIKLRPRAYVQLPIRFIPVQQGEYECTLRASVHPVIEDEEVISVDSKVLSSGDFRLSCRRGKSIALELRGQGE 1150

The following BLAST results are available for this feature:

BLAST of NO07G02540.1 vs.

BLAST of NO07G02540.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
EWM27093.1	1.100e-62	35.36	hypothetical protein Naga_100046g4 [Nannochloropsi...	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO07G02540	NO07G02540	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO07G02540.1	NO07G02540.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO07G02540.1.cds1	NO07G02540.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr7:732693..736517-
coding sequence from alignment at chr7:732693..736517-

mRNA sequence

>NO07G02540.1 ID=NO07G02540.1|Name=NO07G02540.1|organism=Nannochloropsis oceanica|type=mRNA|length=3825bp
ATGGCAACAACCAATGTCGATGCCGAGGCCAATGACCTGGCGCAGTATCT
GCGGCAGGAGGAGGACTCGGAGAACCGCACGCCGGTGGCTGCGTCGAGCC
ACAAGAAACGACGAGAGCACCATCAGCAACTGAAGAGTCCAAGCCTCGCC
TCTATACTTGGTGCGCCGACGCCCTCCCCGAACCGTCGACTGCTGTTTGA
CCGTGACCGGGACCCGCAGCGGGCACCCTTTCAAAGCCTTGACGACTTGA
GCAACCATCACGACCGAGCGCAGTCTCTTGCCTCGGACAAAAAGGAAAGG
GTGGCCAACAGCAGCTTCATCAGTACCAGCAGCGCGGGCGACAACGACAA
CATGACACCCATCGGCAAGATGGGTGTCAGCCCTATCTTTCGTTCCCCTT
TGACCACGACAAAACCCGAAAAAAAACACGGTGGTAGCAGCAGCGATGCC
AGGAGTGCGACAAGCAGCAGCGGTCGTCGTCGGTTGATAGATGTGGAGAA
GAGTCCGTCATCATTGACCCCCAAGCACGAAAATGAAACCGGCAGTACCT
CCAGTAGCCTCAGCCAGAAGTCTGGTAGGGACATGGATAGTCCCATATTT
TATTTGAGCTCTGATTCGAGCGATAATGATGACGATGAAGAGGGAGCGGA
AGCGGCCCTGTATTTGGACGAAAAAATAGCGGAGGTAGAAGAAAACGGAG
TAGCAGCAGGTGAAAAAGGAAGTCGACGGAACCATGCAAGCGACGAGCAA
CAACAAGAAGGAGTAGAATATGAGAATATCACACCCACCAACGCGTCTAC
TGCCTCTTCCCCTCTACTCACTTCCTCTACCACAAGTGTCAAAGGCATGT
CCCCCACGTTGTCAACGACACGACAATTCTCCTCCTCCGGCTCTCCTACC
CTCGCCCGTCCTATTCAGCCCTCTTGTCAGCCACTCCGGACCTTCGCCTC
CCCCATGCCTACATTTCCCCGTGTCCCCGCACCTTCTCCTATCTCTCCCA
TCTCTCCTCCCCCACCCGGACTCCAAGCACCAGCGCCAAGCACCCCGTCA
GTAGATGCCCTGATATCCCGGGCTCACGCAATCCATACACCTGACGTCGT
TGAGAAAGAGAGGATTAAGAGTTGGTTTAGCGATCGCATGCTTTCTGCAG
TCAAGAAGTTTGTGTGGCAGGACACACAGTGTCAGGATCTCTCCGGACGG
CCTGGCGCGCAGCAGCGGCAGCAGCAGCAACACGACAAAATTTCTCGTCG
AGGGGAGGGAAGAGAAGAAGGATATCTGTCTACGATACATAAGGAGGGAG
ATAATGGTGGTGAATTCCTTTCTATTGCTGACTTGTCCGACAAGTCGGCG
TCGTTATCGTTGGCGGAAGTGAAGGGAAAAGGGAAGGCCGGGCGTGGTGG
GGAAGTGCGCTTTCATTCGCAGACGTCTTCAATCTCCTCCTTCTTCGCCT
CGTCTTCTCGGCAAATCGGCACCAATAAGATGGACGTACCGGTAATGGAG
AGCGCACAGCAGCTATTGCAGCAGCCACGCTGGTCTATCTACACGATGGA
GCCCCCCGTGTCTCCTCCGCGCCAACTGCAGCAGCACCAGCAGCAGCACC
ACCACCACCCAAAGCCAGCGGAGCGTTGGGATGGCTTTCCTACCATTCCT
CGGTCTGTTCAATCTCCGCCTTCTTCGACCGTCAGTTCCTCCGGTGACTT
AACCAAAGCGGTCTCCTCCCAAGCAGCAGCAGCAGCAGCACGCGCAGCGG
CTAGGGCGGCAGCAGTAGCAACAGCAGCAGCAATAGCTGTATCCAGTTCG
GCGTCTTCAAGCAGAGAAAGACCCTTTTCTGCTTCTGCTGCCGCTGCGGT
CCCGTCCTCCTCTCTCTCCTCCTCATTTTCCTCGTCTTCCTCCTGTGTGT
CTGCCCCCTCCCTTTCTGCTGCAGAAAGGAAAAAGGAGCCAGAGGGAGAC
TCCCTCTTTTCGATCTCTCTTCCTCTTTTGACCGGGGCTCGCCGTGGGTG
GGGGGCAGACAGTGCCTGTTCGCGGCATCGACCCGAACTACGCAGTGGTC
ACGGGCAGGGGAACGAGAAGGAGGACGAAGGCCGAACGCAGGTCCGACGG
CGGATGCTGGCTCTTTCCTCTACAGGTGACGATATCAGGAGGGACAGTGA
GAGCGGCAGCAGCAGCAGTAGCATGAATGGTACGGGCATGAGGGAAGGCA
GGAAGGGCAACTGCAGCAACAGCGCTAGCAGTAGTGCCAGCCTCAGCAGT
AGAGCGATGGTCACCACCGCATTTCCAACGAGTCCCAAGTCGGTGCTGGA
AGTGCTAGCTATGGCTTCCTCCTCCCCTACCTCCTTCGCTGCCTCCCTTG
CGTCCTGCTCTTCCTCTATCTCCTCCTTCCGTCCCGCTTCTTCCCGTGGG
CAGATACCTTTCCATTTTAGCATGAGCAGCGATGAAGAACAGGAGCAAGA
GCAAGAAGTTGCAGAGGCAGCAGAGCGGGGCCTGTCACCAAGCCGCCCTC
CTCCACCAACCGCACGGTTGCCCCATTTATATTCGCCTCTGCAGCCTGCT
GCTTCTTTGCCGCAAAGCGAGGAAGGTAGAAAGAAAGGACTAACAACTCA
TCGAACATTTGAAGGATTACTTCAGGAAAGCGATGTGGAGGTGTCTCGCC
GCAATTCTGCACCGTCCTCTAATTCCTCCTCCTTTTCCCCGTCGTCCATC
TCCTCTTCCTCAACTTTATCGCCTTCTGCACCTTCACCTTCGTACCCCAA
CAAGCCGACTTGTATTACAACAATCGCCGCTACTACTGCTGCTCGTCCTT
CCCCTCCAGTCATGCCCGACGTTTCCTTGCCAATCACTTGGCGCGAAGTC
TTAGTGGGCTGTGCCGCTTCCCGTGAACTTCAACTCCGAAACTGTCGGCC
TGGCCCTTGCATTGTTCACGTTGCCTTTACCTTCCATCATCAGGAGGACG
AGGACGAAGAAGGGGGGGAGGCCAAGAGGGAGAAGGAGGGTTGTTTTCAC
GTGAGCAGCTGCGGCAAGGTCCGGGAGAAGGACGGGGAGGTAGTGGGTGC
TGACGGCATTCTACGTTTGTTGATTACCTTTCTTCCTGTGCACTCAGGCT
TGCATCGTGCCACGTTGCATTTGCGTGTGGGTGTGCCTGTTGAGGAGGGT
AGAGGAGCGGGAGAAGGAAAAAGAGGAGGGGGAAGGGAAGAAGGGATGTA
CGACGTTGACCTGGTGGGAACGGCGACTGACGGAGAAGTGGGGACAGCGG
GAGGGATTGGAGGAGTGGTTAAGACACCCTTGCAGCTGGAGGTGAATTTT
AGTGATCGAAGCGCCAAAAACAGATATTTGAGGAGGCTCTACCCCAGCAG
GAAGGGAAAGGATGCGGCAGTAGCAGTGGGCGCGAAGTCATTAAGAATCT
CGGATGAGTCCCCCATGTCTCCAACACACTCGACACCAACACAACCATCG
TCCTCCAATTCCGCCTTTTTATCTTCTTCTTCCGGGACCCCTGGGGTAGG
TTTTGCTCAAACCTTTATCAACTTTGGGAAGCAACCACTGGGCAGCGTGA
ACATCCAGAGGGTGCGGCTGTGTAACCCTCTTTCCGCGCCGCAGCTGGTT
GTGTTGGAATCTGCCTCCCTTCCCTTCGTCTTGGCCCATCGGGTCATAAA
GCTGAGACCGAAGGCTTTTGTCAAGCTTCCTTTGCGGTTTGTGCCGGTGC
ATCGTGGTGAGTTCGCAGTTACCTTGCGGGCAAATGTGCATGCTTTACAC
GGGGAGGGGCAGGGGATTAAAAATGGTGGGAGTAGCCGGGACATAACGCT
GGAATTGCGTGGACAAGTGGAGTGA

protein sequence of NO07G02540.1

>NO07G02540.1-protein ID=NO07G02540.1-protein|Name=NO07G02540.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1275bp
MATTNVDAEANDLAQYLRQEEDSENRTPVAASSHKKRREHHQQLKSPSLA
SILGAPTPSPNRRLLFDRDRDPQRAPFQSLDDLSNHHDRAQSLASDKKER
VANSSFISTSSAGDNDNMTPIGKMGVSPIFRSPLTTTKPEKKHGGSSSDA
RSATSSSGRRRLIDVEKSPSSLTPKHENETGSTSSSLSQKSGRDMDSPIF
YLSSDSSDNDDDEEGAEAALYLDEKIAEVEENGVAAGEKGSRRNHASDEQ
QQEGVEYENITPTNASTASSPLLTSSTTSVKGMSPTLSTTRQFSSSGSPT
LARPIQPSCQPLRTFASPMPTFPRVPAPSPISPISPPPPGLQAPAPSTPS
VDALISRAHAIHTPDVVEKERIKSWFSDRMLSAVKKFVWQDTQCQDLSGR
PGAQQRQQQQHDKISRRGEGREEGYLSTIHKEGDNGGEFLSIADLSDKSA
SLSLAEVKGKGKAGRGGEVRFHSQTSSISSFFASSSRQIGTNKMDVPVME
SAQQLLQQPRWSIYTMEPPVSPPRQLQQHQQQHHHHPKPAERWDGFPTIP
RSVQSPPSSTVSSSGDLTKAVSSQAAAAAARAAARAAAVATAAAIAVSSS
ASSSRERPFSASAAAAVPSSSLSSSFSSSSSCVSAPSLSAAERKKEPEGD
SLFSISLPLLTGARRGWGADSACSRHRPELRSGHGQGNEKEDEGRTQVRR
RMLALSSTGDDIRRDSESGSSSSSMNGTGMREGRKGNCSNSASSSASLSS
RAMVTTAFPTSPKSVLEVLAMASSSPTSFAASLASCSSSISSFRPASSRG
QIPFHFSMSSDEEQEQEQEVAEAAERGLSPSRPPPPTARLPHLYSPLQPA
ASLPQSEEGRKKGLTTHRTFEGLLQESDVEVSRRNSAPSSNSSSFSPSSI
SSSSTLSPSAPSPSYPNKPTCITTIAATTAARPSPPVMPDVSLPITWREV
LVGCAASRELQLRNCRPGPCIVHVAFTFHHQEDEDEEGGEAKREKEGCFH
VSSCGKVREKDGEVVGADGILRLLITFLPVHSGLHRATLHLRVGVPVEEG
RGAGEGKRGGGREEGMYDVDLVGTATDGEVGTAGGIGGVVKTPLQLEVNF
SDRSAKNRYLRRLYPSRKGKDAAVAVGAKSLRISDESPMSPTHSTPTQPS
SSNSAFLSSSSGTPGVGFAQTFINFGKQPLGSVNIQRVRLCNPLSAPQLV
VLESASLPFVLAHRVIKLRPKAFVKLPLRFVPVHRGEFAVTLRANVHALH
GEGQGIKNGGSSRDITLELRGQVE*

mRNA from alignment at chr7:732693..736517-

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO07G02540.1 ID=NO07G02540.1|Name=NO07G02540.1|organism=Nannochloropsis oceanica|type=mRNA|length=3825bp|location=Sequence derived from alignment at chr7:732693..736517- (Nannochloropsis oceanica)
ATGGCAACAACCAATGTCGATGCCGAGGCCAATGACCTGGCGCAGTATCT
GCGGCAGGAGGAGGACTCGGAGAACCGCACGCCGGTGGCTGCGTCGAGCC
ACAAGAAACGACGAGAGCACCATCAGCAACTGAAGAGTCCAAGCCTCGCC
TCTATACTTGGTGCGCCGACGCCCTCCCCGAACCGTCGACTGCTGTTTGA
CCGTGACCGGGACCCGCAGCGGGCACCCTTTCAAAGCCTTGACGACTTGA
GCAACCATCACGACCGAGCGCAGTCTCTTGCCTCGGACAAAAAGGAAAGG
GTGGCCAACAGCAGCTTCATCAGTACCAGCAGCGCGGGCGACAACGACAA
CATGACACCCATCGGCAAGATGGGTGTCAGCCCTATCTTTCGTTCCCCTT
TGACCACGACAAAACCCGAAAAAAAACACGGTGGTAGCAGCAGCGATGCC
AGGAGTGCGACAAGCAGCAGCGGTCGTCGTCGGTTGATAGATGTGGAGAA
GAGTCCGTCATCATTGACCCCCAAGCACGAAAATGAAACCGGCAGTACCT
CCAGTAGCCTCAGCCAGAAGTCTGGTAGGGACATGGATAGTCCCATATTT
TATTTGAGCTCTGATTCGAGCGATAATGATGACGATGAAGAGGGAGCGGA
AGCGGCCCTGTATTTGGACGAAAAAATAGCGGAGGTAGAAGAAAACGGAG
TAGCAGCAGGTGAAAAAGGAAGTCGACGGAACCATGCAAGCGACGAGCAA
CAACAAGAAGGAGTAGAATATGAGAATATCACACCCACCAACGCGTCTAC
TGCCTCTTCCCCTCTACTCACTTCCTCTACCACAAGTGTCAAAGGCATGT
CCCCCACGTTGTCAACGACACGACAATTCTCCTCCTCCGGCTCTCCTACC
CTCGCCCGTCCTATTCAGCCCTCTTGTCAGCCACTCCGGACCTTCGCCTC
CCCCATGCCTACATTTCCCCGTGTCCCCGCACCTTCTCCTATCTCTCCCA
TCTCTCCTCCCCCACCCGGACTCCAAGCACCAGCGCCAAGCACCCCGTCA
GTAGATGCCCTGATATCCCGGGCTCACGCAATCCATACACCTGACGTCGT
TGAGAAAGAGAGGATTAAGAGTTGGTTTAGCGATCGCATGCTTTCTGCAG
TCAAGAAGTTTGTGTGGCAGGACACACAGTGTCAGGATCTCTCCGGACGG
CCTGGCGCGCAGCAGCGGCAGCAGCAGCAACACGACAAAATTTCTCGTCG
AGGGGAGGGAAGAGAAGAAGGATATCTGTCTACGATACATAAGGAGGGAG
ATAATGGTGGTGAATTCCTTTCTATTGCTGACTTGTCCGACAAGTCGGCG
TCGTTATCGTTGGCGGAAGTGAAGGGAAAAGGGAAGGCCGGGCGTGGTGG
GGAAGTGCGCTTTCATTCGCAGACGTCTTCAATCTCCTCCTTCTTCGCCT
CGTCTTCTCGGCAAATCGGCACCAATAAGATGGACGTACCGGTAATGGAG
AGCGCACAGCAGCTATTGCAGCAGCCACGCTGGTCTATCTACACGATGGA
GCCCCCCGTGTCTCCTCCGCGCCAACTGCAGCAGCACCAGCAGCAGCACC
ACCACCACCCAAAGCCAGCGGAGCGTTGGGATGGCTTTCCTACCATTCCT
CGGTCTGTTCAATCTCCGCCTTCTTCGACCGTCAGTTCCTCCGGTGACTT
AACCAAAGCGGTCTCCTCCCAAGCAGCAGCAGCAGCAGCACGCGCAGCGG
CTAGGGCGGCAGCAGTAGCAACAGCAGCAGCAATAGCTGTATCCAGTTCG
GCGTCTTCAAGCAGAGAAAGACCCTTTTCTGCTTCTGCTGCCGCTGCGGT
CCCGTCCTCCTCTCTCTCCTCCTCATTTTCCTCGTCTTCCTCCTGTGTGT
CTGCCCCCTCCCTTTCTGCTGCAGAAAGGAAAAAGGAGCCAGAGGGAGAC
TCCCTCTTTTCGATCTCTCTTCCTCTTTTGACCGGGGCTCGCCGTGGGTG
GGGGGCAGACAGTGCCTGTTCGCGGCATCGACCCGAACTACGCAGTGGTC
ACGGGCAGGGGAACGAGAAGGAGGACGAAGGCCGAACGCAGGTCCGACGG
CGGATGCTGGCTCTTTCCTCTACAGGTGACGATATCAGGAGGGACAGTGA
GAGCGGCAGCAGCAGCAGTAGCATGAATGGTACGGGCATGAGGGAAGGCA
GGAAGGGCAACTGCAGCAACAGCGCTAGCAGTAGTGCCAGCCTCAGCAGT
AGAGCGATGGTCACCACCGCATTTCCAACGAGTCCCAAGTCGGTGCTGGA
AGTGCTAGCTATGGCTTCCTCCTCCCCTACCTCCTTCGCTGCCTCCCTTG
CGTCCTGCTCTTCCTCTATCTCCTCCTTCCGTCCCGCTTCTTCCCGTGGG
CAGATACCTTTCCATTTTAGCATGAGCAGCGATGAAGAACAGGAGCAAGA
GCAAGAAGTTGCAGAGGCAGCAGAGCGGGGCCTGTCACCAAGCCGCCCTC
CTCCACCAACCGCACGGTTGCCCCATTTATATTCGCCTCTGCAGCCTGCT
GCTTCTTTGCCGCAAAGCGAGGAAGGTAGAAAGAAAGGACTAACAACTCA
TCGAACATTTGAAGGATTACTTCAGGAAAGCGATGTGGAGGTGTCTCGCC
GCAATTCTGCACCGTCCTCTAATTCCTCCTCCTTTTCCCCGTCGTCCATC
TCCTCTTCCTCAACTTTATCGCCTTCTGCACCTTCACCTTCGTACCCCAA
CAAGCCGACTTGTATTACAACAATCGCCGCTACTACTGCTGCTCGTCCTT
CCCCTCCAGTCATGCCCGACGTTTCCTTGCCAATCACTTGGCGCGAAGTC
TTAGTGGGCTGTGCCGCTTCCCGTGAACTTCAACTCCGAAACTGTCGGCC
TGGCCCTTGCATTGTTCACGTTGCCTTTACCTTCCATCATCAGGAGGACG
AGGACGAAGAAGGGGGGGAGGCCAAGAGGGAGAAGGAGGGTTGTTTTCAC
GTGAGCAGCTGCGGCAAGGTCCGGGAGAAGGACGGGGAGGTAGTGGGTGC
TGACGGCATTCTACGTTTGTTGATTACCTTTCTTCCTGTGCACTCAGGCT
TGCATCGTGCCACGTTGCATTTGCGTGTGGGTGTGCCTGTTGAGGAGGGT
AGAGGAGCGGGAGAAGGAAAAAGAGGAGGGGGAAGGGAAGAAGGGATGTA
CGACGTTGACCTGGTGGGAACGGCGACTGACGGAGAAGTGGGGACAGCGG
GAGGGATTGGAGGAGTGGTTAAGACACCCTTGCAGCTGGAGGTGAATTTT
AGTGATCGAAGCGCCAAAAACAGATATTTGAGGAGGCTCTACCCCAGCAG
GAAGGGAAAGGATGCGGCAGTAGCAGTGGGCGCGAAGTCATTAAGAATCT
CGGATGAGTCCCCCATGTCTCCAACACACTCGACACCAACACAACCATCG
TCCTCCAATTCCGCCTTTTTATCTTCTTCTTCCGGGACCCCTGGGGTAGG
TTTTGCTCAAACCTTTATCAACTTTGGGAAGCAACCACTGGGCAGCGTGA
ACATCCAGAGGGTGCGGCTGTGTAACCCTCTTTCCGCGCCGCAGCTGGTT
GTGTTGGAATCTGCCTCCCTTCCCTTCGTCTTGGCCCATCGGGTCATAAA
GCTGAGACCGAAGGCTTTTGTCAAGCTTCCTTTGCGGTTTGTGCCGGTGC
ATCGTGGTGAGTTCGCAGTTACCTTGCGGGCAAATGTGCATGCTTTACAC
GGGGAGGGGCAGGGGATTAAAAATGGTGGGAGTAGCCGGGACATAACGCT
GGAATTGCGTGGACAAGTGGAGTGA

Coding sequence (CDS) from alignment at chr7:732693..736517-

>NO07G02540.1 ID=NO07G02540.1|Name=NO07G02540.1|organism=Nannochloropsis oceanica|type=CDS|length=3825bp|location=Sequence derived from alignment at chr7:732693..736517- (Nannochloropsis oceanica)
ATGGCAACAACCAATGTCGATGCCGAGGCCAATGACCTGGCGCAGTATCT
GCGGCAGGAGGAGGACTCGGAGAACCGCACGCCGGTGGCTGCGTCGAGCC
ACAAGAAACGACGAGAGCACCATCAGCAACTGAAGAGTCCAAGCCTCGCC
TCTATACTTGGTGCGCCGACGCCCTCCCCGAACCGTCGACTGCTGTTTGA
CCGTGACCGGGACCCGCAGCGGGCACCCTTTCAAAGCCTTGACGACTTGA
GCAACCATCACGACCGAGCGCAGTCTCTTGCCTCGGACAAAAAGGAAAGG
GTGGCCAACAGCAGCTTCATCAGTACCAGCAGCGCGGGCGACAACGACAA
CATGACACCCATCGGCAAGATGGGTGTCAGCCCTATCTTTCGTTCCCCTT
TGACCACGACAAAACCCGAAAAAAAACACGGTGGTAGCAGCAGCGATGCC
AGGAGTGCGACAAGCAGCAGCGGTCGTCGTCGGTTGATAGATGTGGAGAA
GAGTCCGTCATCATTGACCCCCAAGCACGAAAATGAAACCGGCAGTACCT
CCAGTAGCCTCAGCCAGAAGTCTGGTAGGGACATGGATAGTCCCATATTT
TATTTGAGCTCTGATTCGAGCGATAATGATGACGATGAAGAGGGAGCGGA
AGCGGCCCTGTATTTGGACGAAAAAATAGCGGAGGTAGAAGAAAACGGAG
TAGCAGCAGGTGAAAAAGGAAGTCGACGGAACCATGCAAGCGACGAGCAA
CAACAAGAAGGAGTAGAATATGAGAATATCACACCCACCAACGCGTCTAC
TGCCTCTTCCCCTCTACTCACTTCCTCTACCACAAGTGTCAAAGGCATGT
CCCCCACGTTGTCAACGACACGACAATTCTCCTCCTCCGGCTCTCCTACC
CTCGCCCGTCCTATTCAGCCCTCTTGTCAGCCACTCCGGACCTTCGCCTC
CCCCATGCCTACATTTCCCCGTGTCCCCGCACCTTCTCCTATCTCTCCCA
TCTCTCCTCCCCCACCCGGACTCCAAGCACCAGCGCCAAGCACCCCGTCA
GTAGATGCCCTGATATCCCGGGCTCACGCAATCCATACACCTGACGTCGT
TGAGAAAGAGAGGATTAAGAGTTGGTTTAGCGATCGCATGCTTTCTGCAG
TCAAGAAGTTTGTGTGGCAGGACACACAGTGTCAGGATCTCTCCGGACGG
CCTGGCGCGCAGCAGCGGCAGCAGCAGCAACACGACAAAATTTCTCGTCG
AGGGGAGGGAAGAGAAGAAGGATATCTGTCTACGATACATAAGGAGGGAG
ATAATGGTGGTGAATTCCTTTCTATTGCTGACTTGTCCGACAAGTCGGCG
TCGTTATCGTTGGCGGAAGTGAAGGGAAAAGGGAAGGCCGGGCGTGGTGG
GGAAGTGCGCTTTCATTCGCAGACGTCTTCAATCTCCTCCTTCTTCGCCT
CGTCTTCTCGGCAAATCGGCACCAATAAGATGGACGTACCGGTAATGGAG
AGCGCACAGCAGCTATTGCAGCAGCCACGCTGGTCTATCTACACGATGGA
GCCCCCCGTGTCTCCTCCGCGCCAACTGCAGCAGCACCAGCAGCAGCACC
ACCACCACCCAAAGCCAGCGGAGCGTTGGGATGGCTTTCCTACCATTCCT
CGGTCTGTTCAATCTCCGCCTTCTTCGACCGTCAGTTCCTCCGGTGACTT
AACCAAAGCGGTCTCCTCCCAAGCAGCAGCAGCAGCAGCACGCGCAGCGG
CTAGGGCGGCAGCAGTAGCAACAGCAGCAGCAATAGCTGTATCCAGTTCG
GCGTCTTCAAGCAGAGAAAGACCCTTTTCTGCTTCTGCTGCCGCTGCGGT
CCCGTCCTCCTCTCTCTCCTCCTCATTTTCCTCGTCTTCCTCCTGTGTGT
CTGCCCCCTCCCTTTCTGCTGCAGAAAGGAAAAAGGAGCCAGAGGGAGAC
TCCCTCTTTTCGATCTCTCTTCCTCTTTTGACCGGGGCTCGCCGTGGGTG
GGGGGCAGACAGTGCCTGTTCGCGGCATCGACCCGAACTACGCAGTGGTC
ACGGGCAGGGGAACGAGAAGGAGGACGAAGGCCGAACGCAGGTCCGACGG
CGGATGCTGGCTCTTTCCTCTACAGGTGACGATATCAGGAGGGACAGTGA
GAGCGGCAGCAGCAGCAGTAGCATGAATGGTACGGGCATGAGGGAAGGCA
GGAAGGGCAACTGCAGCAACAGCGCTAGCAGTAGTGCCAGCCTCAGCAGT
AGAGCGATGGTCACCACCGCATTTCCAACGAGTCCCAAGTCGGTGCTGGA
AGTGCTAGCTATGGCTTCCTCCTCCCCTACCTCCTTCGCTGCCTCCCTTG
CGTCCTGCTCTTCCTCTATCTCCTCCTTCCGTCCCGCTTCTTCCCGTGGG
CAGATACCTTTCCATTTTAGCATGAGCAGCGATGAAGAACAGGAGCAAGA
GCAAGAAGTTGCAGAGGCAGCAGAGCGGGGCCTGTCACCAAGCCGCCCTC
CTCCACCAACCGCACGGTTGCCCCATTTATATTCGCCTCTGCAGCCTGCT
GCTTCTTTGCCGCAAAGCGAGGAAGGTAGAAAGAAAGGACTAACAACTCA
TCGAACATTTGAAGGATTACTTCAGGAAAGCGATGTGGAGGTGTCTCGCC
GCAATTCTGCACCGTCCTCTAATTCCTCCTCCTTTTCCCCGTCGTCCATC
TCCTCTTCCTCAACTTTATCGCCTTCTGCACCTTCACCTTCGTACCCCAA
CAAGCCGACTTGTATTACAACAATCGCCGCTACTACTGCTGCTCGTCCTT
CCCCTCCAGTCATGCCCGACGTTTCCTTGCCAATCACTTGGCGCGAAGTC
TTAGTGGGCTGTGCCGCTTCCCGTGAACTTCAACTCCGAAACTGTCGGCC
TGGCCCTTGCATTGTTCACGTTGCCTTTACCTTCCATCATCAGGAGGACG
AGGACGAAGAAGGGGGGGAGGCCAAGAGGGAGAAGGAGGGTTGTTTTCAC
GTGAGCAGCTGCGGCAAGGTCCGGGAGAAGGACGGGGAGGTAGTGGGTGC
TGACGGCATTCTACGTTTGTTGATTACCTTTCTTCCTGTGCACTCAGGCT
TGCATCGTGCCACGTTGCATTTGCGTGTGGGTGTGCCTGTTGAGGAGGGT
AGAGGAGCGGGAGAAGGAAAAAGAGGAGGGGGAAGGGAAGAAGGGATGTA
CGACGTTGACCTGGTGGGAACGGCGACTGACGGAGAAGTGGGGACAGCGG
GAGGGATTGGAGGAGTGGTTAAGACACCCTTGCAGCTGGAGGTGAATTTT
AGTGATCGAAGCGCCAAAAACAGATATTTGAGGAGGCTCTACCCCAGCAG
GAAGGGAAAGGATGCGGCAGTAGCAGTGGGCGCGAAGTCATTAAGAATCT
CGGATGAGTCCCCCATGTCTCCAACACACTCGACACCAACACAACCATCG
TCCTCCAATTCCGCCTTTTTATCTTCTTCTTCCGGGACCCCTGGGGTAGG
TTTTGCTCAAACCTTTATCAACTTTGGGAAGCAACCACTGGGCAGCGTGA
ACATCCAGAGGGTGCGGCTGTGTAACCCTCTTTCCGCGCCGCAGCTGGTT
GTGTTGGAATCTGCCTCCCTTCCCTTCGTCTTGGCCCATCGGGTCATAAA
GCTGAGACCGAAGGCTTTTGTCAAGCTTCCTTTGCGGTTTGTGCCGGTGC
ATCGTGGTGAGTTCGCAGTTACCTTGCGGGCAAATGTGCATGCTTTACAC
GGGGAGGGGCAGGGGATTAAAAATGGTGGGAGTAGCCGGGACATAACGCT
GGAATTGCGTGGACAAGTGGAGTGA

Synonyms

Publications