|
|
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| chr7 | genome | chr7:732583..740130 + |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
BLAST of NO07G02530.2 vs.
Match: EWM27124.1 (JmjC domain protein [Nannochloropsis gaditana]) HSP 1 Score: 1197.6 bits (3097), Expect = 0.000e+0 Identity = 577/812 (71.06%), Postives = 676/812 (83.25%), Query Frame = 0
Query: 110 MMVGVGYKDKSSKSSIAAAWGYTRRTGITNSVRAHWASRRGKKVLVGLFIVLLCTTMFIAHLIRLSAGIFRSSSSNAPPAVRSFVSEDGAEDVAPQQLLFPEQDLGEVPELGGIDWASKNIDDAWEQPVARYLHLNPSDLKDAELAMPVLFPVAVQLQGDHDLDLTLCQFDVTPYHRNPEQYPMSKDLIMNFCSERRRSNKLASILAEDATAGKQLQPTGFIFHESRVGSTLVANMLASVPTNLVYSEPSLPTGVIHACDKAGCSEETTVRLLRMAILAMGRSHVHELFFIKFSSSLVMNMDLILKAFPETPWVFIYRDPVEIMVSNFMRGKGNGPCVRAKSKAPEAVQAILGKDRRAASKVSDEEYCAAHLTMLCQAALEQVQAHGSKGQAVAYESLVEDMMDVIVPGHFGVSMNGEEIARMREQSEKYSKARTGETAFEGDVEEKHEKATSAMKKAAEKYLSRPTEELRQASQQGRRQLEGNALLRAQESRVYERTGSRFFQLPHCPDEPEYPPEVPIMDLVTNWNPDNISVPARHYSTLCRFDYQKDLAKALRYRDAEIPFVVYNIPELEETVERWNSPGYLSDELGDQAFHTEISKDNHFMYYRLGKRNKAPKNYVPPTKPVKWTYDHWLHEARKAKEISTEEEHYYFRVSDSDHSVVRQDVTIFNGKKSTLFMKEPKKSRGVHCRFGMRGVISEAHFDASRNMVALVAGTRRWILAHPKECKNSYLLPTGHPSGRHSEVDWSAPNLEKYPKFAKMMGHEVLLTAGEVLNVPAWWIHFIENLDINTQCNARSGDSDVGLEDLAKCGFY 922
M+ G GYKDK+ +S IAAAWGYTRRTGI+NSVRAHWASRRGKKVLVG+F+VLLC ++F+ ++IR S G+ R S N +RS E+ V +L E + PEL GIDWA+KNI+D WEQPV R LHLNPSDLKD +L MP+++ + V+LQGDHDLD+ LCQFD++PYHRNPEQ+PMS+DL+ FCS+ R +KLAS+ A D AGKQLQPTGFIFHESRVGSTLVANMLASVPTNLVYSEPS+P VIH C AGCSEETTVRLLRMAILAMGRSH H+ FFIKFSSS V++MDLILKAFPETPW +IYRDPVEI+VSNF RG+G GPC+RAK AP+AVQ IL DRR AS+VSDEEYCAAHLTMLCQAALEQ++ GSKG AVAYE+LVED++ V+VPGHFGVSMN EE ARM QSE YSKARTGET F+GD E+K E+AT AM+ AAEKYL PTE LR AS GR QLE +A LRAQE+RVYERTGSRFFQLPHCPDEPE PP VPIMD++ NWN D+ ++P RHY+TLCRFDYQ + KALRYRDAE+PFVVYNIPE +ETVE+WNS GYL++ L + T++SKDNHFMYYRL K K P Y+PPT+ +W+YDHWLHEARK+K +ST+ EHYYFRVSD D +VRQD+TIF ++STLFMKEP+ SRG+HCRFGMR VI+EAHFDASRNMV+LV+GTRRWILAHP+ECK++YLLPTGHPS RH+EVDWSAP+L+KYP F ++ +EVLLT GEVLNVPAWWIH IENLDIN QCN+RSGDS VGL+DL +CGF+
Sbjct: 1 MITGEGYKDKTPRSRIAAAWGYTRRTGISNSVRAHWASRRGKKVLVGIFVVLLCASLFVVNIIRFSIGLIRGQSLNRI-LIRSLAIEEENTPV----VLLAENESKAAPELAGIDWAAKNIEDKWEQPVVRRLHLNPSDLKDEDLVMPIMYAMGVELQGDHDLDMALCQFDISPYHRNPEQFPMSRDLVGAFCSKNRLKHKLASVHAVDERAGKQLQPTGFIFHESRVGSTLVANMLASVPTNLVYSEPSVPAHVIHLCKNAGCSEETTVRLLRMAILAMGRSHHHDHFFIKFSSSTVVDMDLILKAFPETPWAYIYRDPVEIIVSNFQRGRG-GPCIRAKKNAPKAVQDILETDRRGASRVSDEEYCAAHLTMLCQAALEQMELPGSKGHAVAYETLVEDVLRVLVPGHFGVSMNSEETARMTAQSELYSKARTGETVFQGDTEQKQERATQAMQVAAEKYLKEPTERLRLASTLGRSQLEIDATLRAQEARVYERTGSRFFQLPHCPDEPESPPGVPIMDILGNWNMDDTAIPPRHYNTLCRFDYQTEYDKALRYRDAEMPFVVYNIPEFDETVEKWNSEGYLAEALEGGEYTTQVSKDNHFMYYRLSKSLK-PAGYIPPTRTERWSYDHWLHEARKSKNLSTDSEHYYFRVSDRDSPIVRQDLTIFTSRESTLFMKEPEMSRGIHCRFGMRSVIAEAHFDASRNMVSLVSGTRRWILAHPRECKHAYLLPTGHPSARHTEVDWSAPDLQKYPDFVNLVANEVLLTPGEVLNVPAWWIHTIENLDINIQCNSRSGDSTVGLKDLKRCGFF 805
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO07G02530.2 ID=NO07G02530.2|Name=NO07G02530.2|organism=Nannochloropsis oceanica|type=mRNA|length=7156bp
CACAGCGCTTAGTACTTCTGATCTCTTCATTTTTGCTTACAATTGCTTCC
CCTTTTGACTTCTTTTTTAGAACCACTGACATACGATACTCAGCTACCAC
ACCCCTTCTTTCACTCCACTTGTCCACGCAATTCCAGCGTTATGTCCCGG
CTACTCCCACCATTTTTAATCCCCTGCCCCTCCCCGTGTAAAGCATGCAC
ATTTGCCCGCAAGGTAACTGCGAACTCACCACGATGCACCGGCACAAACC
GCAAAGGAAGCTTGACAAAAGCCTTCGGTCTCAGCTTTATGACCCGATGG
GCCAAGACGAAGGGAAGGGAGGCAGATTCCAACACAACCAGCTGCGGCGC
GGAAAGAGGGTTACACAGCCGCACCCTCTGGATGTTCACGCTGCCCAGTG
GTTGCTTCCCAAAGTTGATAAAGGTTTGAGCAAAACCTACCCCAGGGGTC
CCGGAAGAAGAAGATAAAAAGGCGGAATTGGAGGACGATGGTTGTGTTGG
TGTCGAGTGTGTTGGAGACATGGGGGACTCATCCGAGATTCTTAATGACT
TCGCGCCCACTGCTACTGCCGCATCCTTTCCCTTCCTGCTGGGGTAGAGC
CTCCTCAAATATCTGTTTTTGGCGCTTCGATCACTAAAATTCACCTCCAG
CTGCAAGGGTGTCTTAACCACTCCTCCAATCCCTCCCGCTGTCCCCACTT
CTCCGTCAGTCGCCGTTCCCACCAGGTCAACGTCGTACATCCCTTCTTCC
CTTCCCCCTCCTCTTTTTCCTTCTCCCGCTCCTCTACCCTCCTCAACAGG
CACACCCACACGCAAATGCAACGTGGCACGATGCAAGCCTGAGTGCACAG
GAAGAAAGGTAATCAACAAACGTAGAATGCCGTCAGCACCCACTACCTCC
CCGTCCTTCTCCCGGACCTTGCCGCAGCTGCTCACGTGAAAACAACCCTC
CTTCTCCCTCTTGGCCTCCCCCCCTTCTTCGTCCTCGTCCTCCTGATGAT
GGAAGGTAAAGGCAACGTGAACAATGCAAGGGCCAGGCCGACAGTTTCGG
AGTTGAAGTTCACGGGAAGCGGCACAGCCCACTAAGACTTCGCGCCAAGT
GATTGGCAAGGAAACGTCGGGCATGACTGGAGGGGAAGGACGAGCAGCAG
TAGTAGCGGCGATTGTTGTAATACAAGTCGGCTTGTTGGGGTACGAAGGT
GAAGGTGCAGAAGGCGATAAAGTTGAGGAAGAGGAGATGGACGACGGGGA
AAAGGAGGAGGAATTAGAGGACGGTGCAGAATTGCGGCGAGACACCTCCA
CATCGCTTTCCTGAAGTAATCCTTCAAATGTTCGATGAGTTGTTAGTCCT
TTCTTTCTACCTTCCTCGCTTTGCGGCAAAGAAGCAGCAGGCTGCAGAGG
CGAATATAAATGGGGCAACCGTGCGGTTGGTGGAGGAGGGCGGCTTGGTG
ACAGGCCCCGCTCTGCTGCCTCTGCAACTTCTTGCTCTTGCTCCTGTTCT
TCATCGCTGCTCATGCTAAAATGGAAAGGTATCTGCCCACGGGAAGAAGC
GGGACGGAAGGAGGAGATAGAGGAAGAGCAGGACGCAAGGGAGGCAGCGA
AGGAGGTAGGGGAGGAGGAAGCCATAGCTAGCACTTCCAGCACCGACTTG
GGACTCGTTGGAAATGCGGTGGTGACCATCGCTCTACTGCTGAGGCTGGC
ACTACTGCTAGCGCTGTTGCTGCAGTTGCCCTTCCTGCCTTCCCTCATGC
CCGTACCATTCATGCTACTGCTGCTGCTGCCGCTCTCACTGTCCCTCCTG
ATATCGTCACCTGTAGAGGAAAGAGCCAGCATCCGCCGTCGGACCTGCGT
TCGGCCTTCGTCCTCCTTCTCGTTCCCCTGCCCGTGACCACTGCGTAGTT
CGGGTCGATGCCGCGAACAGGCACTGTCTGCCCCCCACCCACGGCGAGCC
CCGGTCAAAAGAGGAAGAGAGATCGAAAAGAGGGAGTCTCCCTCTGGCTC
CTTTTTCCTTTCTGCAGCAGAAAGGGAGGGGGCAGACACACAGGAGGAAG
ACGAGGAAAATGAGGAGGAGAGAGAGGAGGACGGGACCGCAGCGGCAGCA
GAAGCAGAAAAGGGTCTTTCTCTGCTTGAAGACGCCGAACTGGATACAGC
TATTGCTGCTGCTGTTGCTACTGCTGCCGCCCTAGCCGCTGCGCGTGCTG
CTGCTGCTGCTGCTTGGGAGGAGACCGCTTTGGTTAAGTCACCGGAGGAA
CTGACGGTCGAAGAAGGCGGAGATTGAACAGACCGAGGAATGGTAGGAAA
GCCATCCCAACGCTCCGCTGGCTTTGGGTGGTGGTGGTGCTGCTGCTGGT
GCTGCTGCAGTTGGCGCGGAGGAGACACGGGGGGCTCCATCGTGTAGATA
GACCAGCGTGGCTGCTGCAATAGCTGCTGTGCGCTCTCCATTACCGGTAC
GTCCATCTTATTGGTGCCGATTTGCCGAGAAGACGAGGCGAAGAAGGAGG
AGATTGAAGACGTCTGCGAATGAAAGCGCACTTCCCCACCACGCCCGGCC
TTCCCTTTTCCCTTCACTTCCGCCAACGATAACGACGCCGACTTGTCGGA
CAAGTCAGCAATAGAAAGGAATTCACCACCATTATCTCCCTCCTTATGTA
TCGTAGACAGATATCCTTCTTCTCTTCCCTCCCCTCGACGAGAAATTTTG
TCGTGTTGCTGCTGCTGCCGCTGCTGCGCGCCAGGCCGTCCGGAGAGATC
CTGACACTGTGTGTCCTGCCACACAAACTTCTTGACTGCAGAAAGCATGC
GATCGCTAAACCAACTCTTAATCCTCTCTTTCTCAACGACGTCAGGTGTA
TGGATTGCGTGAGCCCGGGATATCAGGGCATCTACTGACGGGGTGCTTGG
CGCTGGTGCTTGGAGTCCGGGTGGGGGAGGAGAGATGGGAGAGATAGGAG
AAGGTGCGGGGACACGGGGAAATGTAGGCATGGGGGAGGCGAAGGTCCGG
AGTGGCTGACAAGAGGGCTGAATAGGACGGGCGAGGGTAGGAGAGCCGGA
GGAGGAGAATTGTCGTGTCGTTGACAACGTGGGGGACATGCCTTTGACAC
TTGTGGTAGAGGAAGTGAGTAGAGGGGAAGAGGCAGTAGACGCGTTGGTG
GGTGTGATATTCTCATATTCTACTCCTTCTTGTTGTTGCTCGTCGCTTGC
ATGGTTCCGTCGACTTCCTTTTTCACCTGCTGCTACTCCGTTTTCTTCTA
CCTCCGCTATTTTTTCGTCCAAATACAGGGCCGCTTCCGCTCCCTCTTCA
TCGTCATCATTATCGCTCGAATCAGAGCTCAAATAAAATATGGGACTATC
CATGTCCCTACCAGACTTCTGGCTGAGGCTACTGGAGGTACTGCCGGTTT
CATTTTCGTGCTTGGGGGTCAATGATGACGGACTCTTCTCCACATCTATC
AACCGACGACGACCGCTGCTGCTTGTCGCACTCCTGGCATCGCTGCTGCT
ACCACCGTGTTTTTTTTCGGGTTTTGTCGTGGTCAAAGGGGAACGAAAGA
TAGGGCTGACACCCATCTTGCCGATGGGTGTCATGTTGTCGTTGTCGCCC
GCGCTGCTGGTACTGATGAAGCTGCTGTTGGCCACCCTTTCCTTTTTGTC
CGAGGCAAGAGACTGCGCTCGGTCGTGATGGTTGCTCAAGTCGTCAAGGC
TTTGAAAGGGTGCCCGCTGCGGGTCCCGGTCACGGTCAAACAGCAGTCGA
CGGTTCGGGGAGGGCGTCGGCGCACCAAGTATAGAGGCGAGGCTTGGACT
CTTCAGTTGCTGATGGTGCTCTCGTCGTTTCTTGTGGCTCGACGCAGCCA
CCGGCGTGCGGTTCTCCGAGTCCTCCTCCTGCCGCAGATACTGCGCCAGG
TCATTGGCCTCGGCATCGACATTGGTTGTTGCCATGCCCGTCGCCCACAG
TAAACTTTGAAGTCCTGCTTGTGCAGCTGCTGGTCGTTGCCGCGAGAACG
ACTTGCGGCGAGCGAAGAAAAAAGCGAGCGGGGGTGATGTGTCTAGGTGC
CCTTGCCTGCCTGTCGGATTGAGCTGGAAGTTGAGGTTCGTATTTGTTTT
GCGTGGTGAGCATGGTAGACTAAAGTAAAAAGCAAAGGCCTTAGGCCTGT
TATTTAATAGGGTGCGCAATTGATCATAAGCACTGAAAAGCCGTTACGAC
AACAAAAGCTTGCCCGTCGTCTTTCTCTTTCGGAAACCCCAGTCTCGACT
AGCACAGTTCAAGGCCCGGGACAAAAGTGCTGATCTTGGGCCTCACCCTA
TTTACGGATGCGGCGCCTGTGTGGTTATCCTAATCACTTCCTCTTGCCCA
TTTCACACGAGACCCATGGCCCATCTGCTTCTTTGATCGGGACAGCACGC
ACTCATCTCGGGCAAGTTACTCGTGGCGAGACATATCACCCAACCCTACT
ACCATGTGGTGCTGGGAACATGCCGACTCCGTCTCATTCATATTCATCGG
CCGCCGCATTTTCCTATTATGCATCCTATCCAACGCAAAGCACAGGCCCC
AAGGACAAACGCGGACGCCGTTCGGGCATTAGGACACCCACTATCCCCTC
GCCCGCAATTGCCGGTCACCGCGAGCCTGCATCCATGATGGTGGGAGTGG
GCTACAAGGATAAATCATCCAAATCAAGTATTGCGGCAGCATGGGGCTAC
ACCCGGAGGACCGGCATCACAAACTCCGTGCGGGCGCATTGGGCGTCCCG
GCGGGGCAAGAAAGTGCTCGTTGGGCTTTTCATCGTCCTATTGTGCACAA
CTATGTTCATTGCCCATCTCATCCGTCTTTCTGCCGGCATTTTCCGCAGC
AGCAGCAGCAACGCCCCCCCTGCTGTGCGGAGTTTCGTGAGCGAGGACGG
GGCGGAGGATGTTGCGCCGCAGCAGCTTCTATTCCCTGAGCAAGACTTAG
GAGAGGTACCAGAGCTTGGGGGCATTGATTGGGCCAGTAAAAATATTGAC
GACGCATGGGAGCAGCCTGTGGCGCGGTATTTGCATTTGAATCCTTCTGA
TTTGAAGGACGCGGAGCTGGCGATGCCTGTTTTGTTTCCAGTGGCCGTGC
AGCTACAGGGTGATCATGACTTAGATTTGACCTTATGCCAGTTCGATGTC
ACCCCTTACCATCGCAATCCCGAACAGTATCCTATGTCCAAAGACCTGAT
CATGAACTTCTGTTCCGAGCGACGGCGCAGCAACAAACTCGCATCCATCC
TCGCAGAGGACGCGACAGCTGGCAAGCAACTTCAGCCCACCGGATTCATC
TTCCACGAGAGCCGGGTCGGCTCCACTCTAGTGGCTAACATGCTCGCATC
TGTTCCGACCAATTTGGTCTATTCAGAGCCCTCCCTTCCTACCGGTGTCA
TCCACGCTTGCGACAAGGCCGGCTGTTCCGAAGAAACTACCGTCCGCCTC
CTCCGCATGGCCATCCTGGCCATGGGCCGCTCCCACGTCCACGAGCTTTT
TTTCATCAAATTCTCGTCTAGCCTCGTCATGAACATGGATTTAATCCTCA
AGGCTTTTCCTGAGACTCCCTGGGTGTTTATCTACAGAGACCCGGTGGAA
ATAATGGTGTCCAATTTCATGCGTGGGAAGGGGAATGGTCCTTGCGTCCG
GGCAAAGAGCAAGGCGCCTGAAGCCGTGCAGGCGATTCTGGGGAAGGATA
GGAGGGCTGCAAGTAAGGTATCGGACGAAGAGTACTGTGCGGCGCACTTA
ACAATGCTCTGTCAGGCTGCATTGGAGCAGGTGCAAGCCCATGGGTCGAA
GGGGCAGGCGGTTGCGTATGAGTCATTGGTGGAAGATATGATGGATGTGA
TCGTCCCGGGGCATTTTGGCGTGTCTATGAATGGGGAGGAAATTGCGAGA
ATGAGGGAGCAGTCCGAGAAGTATAGTAAGGCCAGAACGGGCGAGACTGC
GTTTGAGGGAGATGTGGAGGAGAAACACGAGAAGGCTACCTCGGCGATGA
AAAAAGCAGCAGAGAAATATTTGAGTAGGCCAACCGAGGAGTTACGACAG
GCTAGTCAGCAAGGAAGAAGACAATTGGAGGGGAATGCATTGTTGAGGGC
ACAGGAGTCGAGGGTGTATGAGAGGACGGGGTCGAGATTTTTCCAGTTGC
CGCATTGTCCGGATGAGCCGGAGTATCCTCCAGAGGTACCTATCATGGAC
CTAGTCACGAATTGGAATCCTGACAATATATCGGTCCCTGCCCGGCATTA
CTCCACCTTGTGTCGATTCGACTACCAAAAAGACCTAGCCAAGGCCTTGC
GGTATCGGGACGCTGAGATCCCGTTCGTGGTGTACAACATCCCTGAACTT
GAAGAGACGGTTGAGAGGTGGAATTCTCCTGGCTACCTGTCCGACGAGCT
GGGCGACCAGGCTTTCCACACGGAGATCAGCAAAGATAACCATTTTATGT
ATTATCGCCTGGGGAAGAGGAATAAAGCGCCTAAAAATTATGTGCCTCCC
ACTAAGCCTGTAAAGTGGACCTATGACCATTGGCTGCACGAGGCGAGGAA
GGCGAAGGAAATCTCGACGGAGGAGGAGCATTATTATTTCCGGGTTTCCG
ATTCGGACCACTCGGTGGTAAGGCAGGATGTGACGATTTTTAATGGGAAA
AAGTCAACACTGTTCATGAAGGAGCCCAAAAAGTCTCGAGGAGTGCATTG
TCGGTTTGGCATGCGCGGGGTAATTTCCGAAGCGCATTTTGACGCGAGTC
GGAACATGGTGGCTTTGGTGGCAGGGACCCGCCGATGGATTCTGGCGCAC
CCTAAGGAGTGTAAGAATTCTTATTTATTACCGACGGGTCATCCGTCTGG
GAGGCATTCGGAGGTGGATTGGAGTGCGCCAAATTTGGAGAAGTATCCTA
AATTCGCAAAGATGATGGGCCATGAGGTGTTGTTGACGGCGGGGGAGGTT
TTGAATGTGCCAGCGTGGTGGATCCACTTTATCGAGAATTTAGATATCAA
CACACAGTGTAATGCGAGGAGTGGGGACTCAGATGTGGGCTTGGAGGACC
TGGCCAAGTGTGGGTTTTATATGGGGTAAGTAGGGAGAGGAAAGAACGAT
GTAATCAATTCGAGGCATGGACCGTGAAAATAAAAATACTACGACAGATT
GTGTGC back to topprotein sequence of NO07G02530.2 >NO07G02530.2-protein ID=NO07G02530.2-protein|Name=NO07G02530.2|organism=Nannochloropsis oceanica|type=polypeptide|length=924bp
MRRLCGYPNHFLLPISHETHGPSASLIGTARTHLGQVTRGETYHPTLLPC
GAGNMPTPSHSYSSAAAFSYYASYPTQSTGPKDKRGRRSGIRTPTIPSPA
IAGHREPASMMVGVGYKDKSSKSSIAAAWGYTRRTGITNSVRAHWASRRG
KKVLVGLFIVLLCTTMFIAHLIRLSAGIFRSSSSNAPPAVRSFVSEDGAE
DVAPQQLLFPEQDLGEVPELGGIDWASKNIDDAWEQPVARYLHLNPSDLK
DAELAMPVLFPVAVQLQGDHDLDLTLCQFDVTPYHRNPEQYPMSKDLIMN
FCSERRRSNKLASILAEDATAGKQLQPTGFIFHESRVGSTLVANMLASVP
TNLVYSEPSLPTGVIHACDKAGCSEETTVRLLRMAILAMGRSHVHELFFI
KFSSSLVMNMDLILKAFPETPWVFIYRDPVEIMVSNFMRGKGNGPCVRAK
SKAPEAVQAILGKDRRAASKVSDEEYCAAHLTMLCQAALEQVQAHGSKGQ
AVAYESLVEDMMDVIVPGHFGVSMNGEEIARMREQSEKYSKARTGETAFE
GDVEEKHEKATSAMKKAAEKYLSRPTEELRQASQQGRRQLEGNALLRAQE
SRVYERTGSRFFQLPHCPDEPEYPPEVPIMDLVTNWNPDNISVPARHYST
LCRFDYQKDLAKALRYRDAEIPFVVYNIPELEETVERWNSPGYLSDELGD
QAFHTEISKDNHFMYYRLGKRNKAPKNYVPPTKPVKWTYDHWLHEARKAK
EISTEEEHYYFRVSDSDHSVVRQDVTIFNGKKSTLFMKEPKKSRGVHCRF
GMRGVISEAHFDASRNMVALVAGTRRWILAHPKECKNSYLLPTGHPSGRH
SEVDWSAPNLEKYPKFAKMMGHEVLLTAGEVLNVPAWWIHFIENLDINTQ
CNARSGDSDVGLEDLAKCGFYMG* back to topmRNA from alignment at chr7:732583..740130+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO07G02530.2 ID=NO07G02530.2|Name=NO07G02530.2|organism=Nannochloropsis oceanica|type=mRNA|length=7548bp|location=Sequence derived from alignment at chr7:732583..740130+ (Nannochloropsis oceanica)
CACAGCGCTTAGTACTTCTGATCTCTTCATTTTTGCTTACAATTGCTTCC
CCTTTTGACTTCTTTTTTAGAACCACTGACATACGATACTCAGCTACCAC
ACCCCTTCTTTCACTCCACTTGTCCACGCAATTCCAGCGTTATGTCCCGG
CTACTCCCACCATTTTTAATCCCCTGCCCCTCCCCGTGTAAAGCATGCAC
ATTTGCCCGCAAGGTAACTGCGAACTCACCACGATGCACCGGCACAAACC
GCAAAGGAAGCTTGACAAAAGCCTTCGGTCTCAGCTTTATGACCCGATGG
GCCAAGACGAAGGGAAGGGAGGCAGATTCCAACACAACCAGCTGCGGCGC
GGAAAGAGGGTTACACAGCCGCACCCTCTGGATGTTCACGCTGCCCAGTG
GTTGCTTCCCAAAGTTGATAAAGGTTTGAGCAAAACCTACCCCAGGGGTC
CCGGAAGAAGAAGATAAAAAGGCGGAATTGGAGGACGATGGTTGTGTTGG
TGTCGAGTGTGTTGGAGACATGGGGGACTCATCCGAGATTCTTAATGACT
TCGCGCCCACTGCTACTGCCGCATCCTTTCCCTTCCTGCTGGGGTAGAGC
CTCCTCAAATATCTGTTTTTGGCGCTTCGATCACTAAAATTCACCTCCAG
CTGCAAGGGTGTCTTAACCACTCCTCCAATCCCTCCCGCTGTCCCCACTT
CTCCGTCAGTCGCCGTTCCCACCAGGTCAACGTCGTACATCCCTTCTTCC
CTTCCCCCTCCTCTTTTTCCTTCTCCCGCTCCTCTACCCTCCTCAACAGG
CACACCCACACGCAAATGCAACGTGGCACGATGCAAGCCTGAGTGCACAG
GAAGAAAGGTAATCAACAAACGTAGAATGCCGTCAGCACCCACTACCTCC
CCGTCCTTCTCCCGGACCTTGCCGCAGCTGCTCACGTGAAAACAACCCTC
CTTCTCCCTCTTGGCCTCCCCCCCTTCTTCGTCCTCGTCCTCCTGATGAT
GGAAGGTAAAGGCAACGTGAACAATGCAAGGGCCAGGCCGACAGTTTCGG
AGTTGAAGTTCACGGGAAGCGGCACAGCCCACTAAGACTTCGCGCCAAGT
GATTGGCAAGGAAACGTCGGGCATGACTGGAGGGGAAGGACGAGCAGCAG
TAGTAGCGGCGATTGTTGTAATACAAGTCGGCTTGTTGGGGTACGAAGGT
GAAGGTGCAGAAGGCGATAAAGTTGAGGAAGAGGAGATGGACGACGGGGA
AAAGGAGGAGGAATTAGAGGACGGTGCAGAATTGCGGCGAGACACCTCCA
CATCGCTTTCCTGAAGTAATCCTTCAAATGTTCGATGAGTTGTTAGTCCT
TTCTTTCTACCTTCCTCGCTTTGCGGCAAAGAAGCAGCAGGCTGCAGAGG
CGAATATAAATGGGGCAACCGTGCGGTTGGTGGAGGAGGGCGGCTTGGTG
ACAGGCCCCGCTCTGCTGCCTCTGCAACTTCTTGCTCTTGCTCCTGTTCT
TCATCGCTGCTCATGCTAAAATGGAAAGGTATCTGCCCACGGGAAGAAGC
GGGACGGAAGGAGGAGATAGAGGAAGAGCAGGACGCAAGGGAGGCAGCGA
AGGAGGTAGGGGAGGAGGAAGCCATAGCTAGCACTTCCAGCACCGACTTG
GGACTCGTTGGAAATGCGGTGGTGACCATCGCTCTACTGCTGAGGCTGGC
ACTACTGCTAGCGCTGTTGCTGCAGTTGCCCTTCCTGCCTTCCCTCATGC
CCGTACCATTCATGCTACTGCTGCTGCTGCCGCTCTCACTGTCCCTCCTG
ATATCGTCACCTGTAGAGGAAAGAGCCAGCATCCGCCGTCGGACCTGCGT
TCGGCCTTCGTCCTCCTTCTCGTTCCCCTGCCCGTGACCACTGCGTAGTT
CGGGTCGATGCCGCGAACAGGCACTGTCTGCCCCCCACCCACGGCGAGCC
CCGGTCAAAAGAGGAAGAGAGATCGAAAAGAGGGAGTCTCCCTCTGGCTC
CTTTTTCCTTTCTGCAGCAGAAAGGGAGGGGGCAGACACACAGGAGGAAG
ACGAGGAAAATGAGGAGGAGAGAGAGGAGGACGGGACCGCAGCGGCAGCA
GAAGCAGAAAAGGGTCTTTCTCTGCTTGAAGACGCCGAACTGGATACAGC
TATTGCTGCTGCTGTTGCTACTGCTGCCGCCCTAGCCGCTGCGCGTGCTG
CTGCTGCTGCTGCTTGGGAGGAGACCGCTTTGGTTAAGTCACCGGAGGAA
CTGACGGTCGAAGAAGGCGGAGATTGAACAGACCGAGGAATGGTAGGAAA
GCCATCCCAACGCTCCGCTGGCTTTGGGTGGTGGTGGTGCTGCTGCTGGT
GCTGCTGCAGTTGGCGCGGAGGAGACACGGGGGGCTCCATCGTGTAGATA
GACCAGCGTGGCTGCTGCAATAGCTGCTGTGCGCTCTCCATTACCGGTAC
GTCCATCTTATTGGTGCCGATTTGCCGAGAAGACGAGGCGAAGAAGGAGG
AGATTGAAGACGTCTGCGAATGAAAGCGCACTTCCCCACCACGCCCGGCC
TTCCCTTTTCCCTTCACTTCCGCCAACGATAACGACGCCGACTTGTCGGA
CAAGTCAGCAATAGAAAGGAATTCACCACCATTATCTCCCTCCTTATGTA
TCGTAGACAGATATCCTTCTTCTCTTCCCTCCCCTCGACGAGAAATTTTG
TCGTGTTGCTGCTGCTGCCGCTGCTGCGCGCCAGGCCGTCCGGAGAGATC
CTGACACTGTGTGTCCTGCCACACAAACTTCTTGACTGCAGAAAGCATGC
GATCGCTAAACCAACTCTTAATCCTCTCTTTCTCAACGACGTCAGGTGTA
TGGATTGCGTGAGCCCGGGATATCAGGGCATCTACTGACGGGGTGCTTGG
CGCTGGTGCTTGGAGTCCGGGTGGGGGAGGAGAGATGGGAGAGATAGGAG
AAGGTGCGGGGACACGGGGAAATGTAGGCATGGGGGAGGCGAAGGTCCGG
AGTGGCTGACAAGAGGGCTGAATAGGACGGGCGAGGGTAGGAGAGCCGGA
GGAGGAGAATTGTCGTGTCGTTGACAACGTGGGGGACATGCCTTTGACAC
TTGTGGTAGAGGAAGTGAGTAGAGGGGAAGAGGCAGTAGACGCGTTGGTG
GGTGTGATATTCTCATATTCTACTCCTTCTTGTTGTTGCTCGTCGCTTGC
ATGGTTCCGTCGACTTCCTTTTTCACCTGCTGCTACTCCGTTTTCTTCTA
CCTCCGCTATTTTTTCGTCCAAATACAGGGCCGCTTCCGCTCCCTCTTCA
TCGTCATCATTATCGCTCGAATCAGAGCTCAAATAAAATATGGGACTATC
CATGTCCCTACCAGACTTCTGGCTGAGGCTACTGGAGGTACTGCCGGTTT
CATTTTCGTGCTTGGGGGTCAATGATGACGGACTCTTCTCCACATCTATC
AACCGACGACGACCGCTGCTGCTTGTCGCACTCCTGGCATCGCTGCTGCT
ACCACCGTGTTTTTTTTCGGGTTTTGTCGTGGTCAAAGGGGAACGAAAGA
TAGGGCTGACACCCATCTTGCCGATGGGTGTCATGTTGTCGTTGTCGCCC
GCGCTGCTGGTACTGATGAAGCTGCTGTTGGCCACCCTTTCCTTTTTGTC
CGAGGCAAGAGACTGCGCTCGGTCGTGATGGTTGCTCAAGTCGTCAAGGC
TTTGAAAGGGTGCCCGCTGCGGGTCCCGGTCACGGTCAAACAGCAGTCGA
CGGTTCGGGGAGGGCGTCGGCGCACCAAGTATAGAGGCGAGGCTTGGACT
CTTCAGTTGCTGATGGTGCTCTCGTCGTTTCTTGTGGCTCGACGCAGCCA
CCGGCGTGCGGTTCTCCGAGTCCTCCTCCTGCCGCAGATACTGCGCCAGG
TCATTGGCCTCGGCATCGACATTGGTTGTTGCCATGCCCGTCGCCCACAG
TAAACTTTGAAGTCCTGCTTGTGCAGCTGCTGGTCGTTGCCGCGAGAACG
ACTTGCGGCGAGCGAAGAAAAAAGCGAGCGGGGGTGATGTGTCTAGGTGC
CCTTGCCTGCCTGTCGGATTGAGCTGGAAGTTGAGGTTCGTATTTGTTTT
GCGTGGTGAGCATGGTAGACTAAAGTAAAAAGCAAAGGCCTTAGGCCTGT
TATTTAATAGGGTGCGCAATTGATCATAAGCACTGAAAAGCCGTTACGAC
AACAAAAGCTTGCCCGTCGTCTTTCTCTTTCGGAAACCCCAGTCTCGACT
AGCACAGTTCAAGGCCCGGGACAAAAGTGCTGATCTTGGGCCTCACCCTA
TTTACGGATGCGGCGCCTGTGTGGTTATCCTAATCACTTCCTCTTGCCCA
TTTCACACGAGACCCATGGCCCATCTGCTTCTTTGATCGGGACAGCACGC
ACTCATCTCGGGCAAGTTACTCGTGGCGAGACATATCACCCAACCCTACT
ACCATGTGGTGCTGGGAACATGCCGACTCCGTCTCATTCATATTCATCGG
CCGCCGCATTTTCCTATTATGCATCCTATCCAACGCAAAGCACAGGCCCC
AAGGACAAACGCGGACGCCGTTCGGGCATTAGGACACCCACTATCCCCTC
GCCCGCAATTGCCGGTCACCGCGAGCCTGCATCCATGATGGTGGGAGTGG
GCTACAAGGATAAATCATCCAAATCAAGTATTGCGGCAGCATGGGGCTAC
ACCCGGAGGACCGGCATCACAAACTCCGTGCGGGCGCATTGGGCGTCCCG
GCGGGGCAAGAAAGTGCTCGTTGGGCTTTTCATGTGAGTGCGTGCAAGGT
GTAGTGTCAAGAGCATATTTAATTATCGGTTTCCATACTCAGTGGTTACA
GCACCTATCTCTCGATATGCTCGGCCTGCCTTTCGTTTTGCCCCACATCC
TGGAAAGCTCCTAGGAAGCCGCCCCAAAAAAACTCTCCCACATCCCACAT
GCATCATCCACCCCACAGCGTCCTATTGTGCACAACTATGTTCATTGCCC
ATCTCATCCGTCTTTCTGCCGGCATTTTCCGCAGCAGCAGCAGCAACGCC
CCCCCTGCTGTGCGGAGTTTCGTGAGCGAGGACGGGGCGGAGGATGTTGC
GCCGCAGCAGCTTCTATTCCCTGAGCAAGACTTAGGAGAGGTACCAGAGC
TTGGGGGCATTGATTGGGCCAGTAAAAATATTGACGACGCATGGGAGCAG
CCTGTGGCGCGGTATTTGCATTTGAATCCTTCTGATTTGAAGGACGCGGA
GCTGGCGATGCCTGTTTTGTTTCCAGTGGCCGTGCAGCTACAGGGTGATC
ATGACTTAGATTTGACCTTATGCCAGTTCGATGTCACCCCTTACCATCGC
AATCCCGAACAGTATCCTATGTCCAAAGACCTGATCATGAACTTCTGTTC
CGAGCGACGGCGCAGCAACAAACTCGCATCCATCCTCGCAGAGGACGCGA
CAGCTGGCAAGCAACTTCAGCCCACCGGATTCATCTTCCACGAGAGCCGG
GTCGGCTCCACTCTAGTGGCTAACATGCTCGCATCTGTTCCGACCAATTT
GGTCTATTCAGAGCCCTCCCTTCCTACCGGTGTCATCCACGCTTGCGACA
AGGCCGGCTGTTCCGAAGAAACTACCGTCCGCCTCCTCCGCATGGCCATC
CTGGCCATGGGCCGCTCCCACGTCCACGAGCTTTTTTTCATCAAATTCTC
GTCTAGCCTCGTCATGAACATGGATTTAATCCTCAAGGCTTTTCCTGAGA
CTCCCTGGGTGTTTATCTACAGAGACCCGGTGGAAATAATGGTGTCCAAT
TTCATGCGTGGGAAGGGGAATGGTCCTTGCGTCCGGGCAAAGAGCAAGGC
GCCTGAAGCCGTGCAGGCGATTCTGGGGAAGGATAGGAGGGCTGCAAGTA
AGGTATCGGACGAAGAGTACTGTGCGGCGCACTTAACAATGCTCTGTCAG
GCTGCATTGGAGCAGGTGCAAGCCCATGGGTCGAAGGGGCAGGCGGTTGC
GTATGAGTCATTGGTGGAAGATATGATGGATGTGATCGTCCCGGGGCATT
TTGGCGTGTCTATGAATGGGGAGGAAATTGCGAGAATGAGGGAGCAGTCC
GAGAAGTATAGTAAGGCCAGAACGGGCGAGACTGCGTTTGAGGGAGATGT
GGAGGAGAAACACGAGAAGGCTACCTCGGCGATGAAAAAAGCAGCAGAGA
AATATTTGAGTAGGCCAACCGAGGAGTTACGACAGGCTAGTCAGCAAGGA
AGAAGACAATTGGAGGGGAATGCATTGTTGAGGGCACAGGAGTCGAGGGT
GTATGAGAGGACGGGGTCGAGATTTTTCCAGTTGCCGCATTGTCCGGATG
AGCCGGAGTATCCTCCAGAGGTGAGTGTCAGTGTTTCTTTTCTCATCGTC
GCTCCCTCACCTGTTGAGGCCTGTACCGTTTTGGTCAAACGTGCGCATAC
ACACATTCAATACACGTCCATTTTATTGGTTATTTATCGATTTATTCGCC
CTATACTTATTTATGTCTAAATTGATTTATTGATTCATCTAATCTGCTGC
TTTCCCAATTTTTAACTACATTCACAGGTACCTATCATGGACCTAGTCAC
GAATTGGAATCCTGACAATATATCGGTCCCTGCCCGGCATTACTCCACCT
TGTGTCGATTCGACTACCAAAAAGACCTAGCCAAGGCCTTGCGGTATCGG
GACGCTGAGATCCCGTTCGTGGTGTACAACATCCCTGAACTTGAAGAGAC
GGTTGAGAGGTGGAATTCTCCTGGCTACCTGTCCGACGAGCTGGGCGACC
AGGCTTTCCACACGGAGATCAGCAAAGATAACCATTTTATGTATTATCGC
CTGGGGAAGAGGAATAAAGCGCCTAAAAATTATGTGCCTCCCACTAAGCC
TGTAAAGTGGACCTATGACCATTGGCTGCACGAGGCGAGGAAGGCGAAGG
AAATCTCGACGGAGGAGGAGCATTATTATTTCCGGGTTTCCGATTCGGAC
CACTCGGTGGTAAGGCAGGATGTGACGATTTTTAATGGGAAAAAGTCAAC
ACTGTTCATGAAGGAGCCCAAAAAGTCTCGAGGAGTGCATTGTCGGTTTG
GCATGCGCGGGGTAATTTCCGAAGCGCATTTTGACGCGAGTCGGAACATG
GTGGCTTTGGTGGCAGGGACCCGCCGATGGATTCTGGCGCACCCTAAGGA
GTGTAAGAATTCTTATTTATTACCGACGGGTCATCCGTCTGGGAGGCATT
CGGAGGTGGATTGGAGTGCGCCAAATTTGGAGAAGTATCCTAAATTCGCA
AAGATGATGGGCCATGAGGTGTTGTTGACGGCGGGGGAGGTTTTGAATGT
GCCAGCGTGGTGGATCCACTTTATCGAGAATTTAGATATCAACACACAGT
GTAATGCGAGGAGTGGGGACTCAGATGTGGGCTTGGAGGACCTGGCCAAG
TGTGGGTTTTATATGGGGTAAGTAGGGAGAGGAAAGAACGATGTAATCAA
TTCGAGGCATGGACCGTGAAAATAAAAATACTACGACAGATTGTGTGC back to topCoding sequence (CDS) from alignment at chr7:732583..740130+ >NO07G02530.2 ID=NO07G02530.2|Name=NO07G02530.2|organism=Nannochloropsis oceanica|type=CDS|length=2772bp|location=Sequence derived from alignment at chr7:732583..740130+ (Nannochloropsis oceanica)
ATGCGGCGCCTGTGTGGTTATCCTAATCACTTCCTCTTGCCCATTTCACA
CGAGACCCATGGCCCATCTGCTTCTTTGATCGGGACAGCACGCACTCATC
TCGGGCAAGTTACTCGTGGCGAGACATATCACCCAACCCTACTACCATGT
GGTGCTGGGAACATGCCGACTCCGTCTCATTCATATTCATCGGCCGCCGC
ATTTTCCTATTATGCATCCTATCCAACGCAAAGCACAGGCCCCAAGGACA
AACGCGGACGCCGTTCGGGCATTAGGACACCCACTATCCCCTCGCCCGCA
ATTGCCGGTCACCGCGAGCCTGCATCCATGATGGTGGGAGTGGGCTACAA
GGATAAATCATCCAAATCAAGTATTGCGGCAGCATGGGGCTACACCCGGA
GGACCGGCATCACAAACTCCGTGCGGGCGCATTGGGCGTCCCGGCGGGGC
AAGAAAGTGCTCGTTGGGCTTTTCATCGTCCTATTGTGCACAACTATGTT
CATTGCCCATCTCATCCGTCTTTCTGCCGGCATTTTCCGCAGCAGCAGCA
GCAACGCCCCCCCTGCTGTGCGGAGTTTCGTGAGCGAGGACGGGGCGGAG
GATGTTGCGCCGCAGCAGCTTCTATTCCCTGAGCAAGACTTAGGAGAGGT
ACCAGAGCTTGGGGGCATTGATTGGGCCAGTAAAAATATTGACGACGCAT
GGGAGCAGCCTGTGGCGCGGTATTTGCATTTGAATCCTTCTGATTTGAAG
GACGCGGAGCTGGCGATGCCTGTTTTGTTTCCAGTGGCCGTGCAGCTACA
GGGTGATCATGACTTAGATTTGACCTTATGCCAGTTCGATGTCACCCCTT
ACCATCGCAATCCCGAACAGTATCCTATGTCCAAAGACCTGATCATGAAC
TTCTGTTCCGAGCGACGGCGCAGCAACAAACTCGCATCCATCCTCGCAGA
GGACGCGACAGCTGGCAAGCAACTTCAGCCCACCGGATTCATCTTCCACG
AGAGCCGGGTCGGCTCCACTCTAGTGGCTAACATGCTCGCATCTGTTCCG
ACCAATTTGGTCTATTCAGAGCCCTCCCTTCCTACCGGTGTCATCCACGC
TTGCGACAAGGCCGGCTGTTCCGAAGAAACTACCGTCCGCCTCCTCCGCA
TGGCCATCCTGGCCATGGGCCGCTCCCACGTCCACGAGCTTTTTTTCATC
AAATTCTCGTCTAGCCTCGTCATGAACATGGATTTAATCCTCAAGGCTTT
TCCTGAGACTCCCTGGGTGTTTATCTACAGAGACCCGGTGGAAATAATGG
TGTCCAATTTCATGCGTGGGAAGGGGAATGGTCCTTGCGTCCGGGCAAAG
AGCAAGGCGCCTGAAGCCGTGCAGGCGATTCTGGGGAAGGATAGGAGGGC
TGCAAGTAAGGTATCGGACGAAGAGTACTGTGCGGCGCACTTAACAATGC
TCTGTCAGGCTGCATTGGAGCAGGTGCAAGCCCATGGGTCGAAGGGGCAG
GCGGTTGCGTATGAGTCATTGGTGGAAGATATGATGGATGTGATCGTCCC
GGGGCATTTTGGCGTGTCTATGAATGGGGAGGAAATTGCGAGAATGAGGG
AGCAGTCCGAGAAGTATAGTAAGGCCAGAACGGGCGAGACTGCGTTTGAG
GGAGATGTGGAGGAGAAACACGAGAAGGCTACCTCGGCGATGAAAAAAGC
AGCAGAGAAATATTTGAGTAGGCCAACCGAGGAGTTACGACAGGCTAGTC
AGCAAGGAAGAAGACAATTGGAGGGGAATGCATTGTTGAGGGCACAGGAG
TCGAGGGTGTATGAGAGGACGGGGTCGAGATTTTTCCAGTTGCCGCATTG
TCCGGATGAGCCGGAGTATCCTCCAGAGGTACCTATCATGGACCTAGTCA
CGAATTGGAATCCTGACAATATATCGGTCCCTGCCCGGCATTACTCCACC
TTGTGTCGATTCGACTACCAAAAAGACCTAGCCAAGGCCTTGCGGTATCG
GGACGCTGAGATCCCGTTCGTGGTGTACAACATCCCTGAACTTGAAGAGA
CGGTTGAGAGGTGGAATTCTCCTGGCTACCTGTCCGACGAGCTGGGCGAC
CAGGCTTTCCACACGGAGATCAGCAAAGATAACCATTTTATGTATTATCG
CCTGGGGAAGAGGAATAAAGCGCCTAAAAATTATGTGCCTCCCACTAAGC
CTGTAAAGTGGACCTATGACCATTGGCTGCACGAGGCGAGGAAGGCGAAG
GAAATCTCGACGGAGGAGGAGCATTATTATTTCCGGGTTTCCGATTCGGA
CCACTCGGTGGTAAGGCAGGATGTGACGATTTTTAATGGGAAAAAGTCAA
CACTGTTCATGAAGGAGCCCAAAAAGTCTCGAGGAGTGCATTGTCGGTTT
GGCATGCGCGGGGTAATTTCCGAAGCGCATTTTGACGCGAGTCGGAACAT
GGTGGCTTTGGTGGCAGGGACCCGCCGATGGATTCTGGCGCACCCTAAGG
AGTGTAAGAATTCTTATTTATTACCGACGGGTCATCCGTCTGGGAGGCAT
TCGGAGGTGGATTGGAGTGCGCCAAATTTGGAGAAGTATCCTAAATTCGC
AAAGATGATGGGCCATGAGGTGTTGTTGACGGCGGGGGAGGTTTTGAATG
TGCCAGCGTGGTGGATCCACTTTATCGAGAATTTAGATATCAACACACAG
TGTAATGCGAGGAGTGGGGACTCAGATGTGGGCTTGGAGGACCTGGCCAA
GTGTGGGTTTTATATGGGGTAA back to top
|