NO07G02450.1, NO07G02450.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO07G02450.1
Unique NameNO07G02450.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1683
Alignment locationchr7:709339..711184 -

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Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr7genomechr7:709339..711184 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
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BLAST of NO07G02450.1 vs.
Match: EWM27127.1 (methyltransferase-like protein 1 [Nannochloropsis gaditana])

HSP 1 Score: 630.2 bits (1624), Expect = 6.200e-177
Identity = 339/526 (64.45%), Postives = 392/526 (74.52%), Query Frame = 0 
Query:    6 PLPSPCHAHPSASSYEWRSSSTALMPPPPPHMYVKRRNLFLQAFDEQGQAQEDDSTVLRHGAFEVKNDYSQHFLETRERPQNFIRDKTVEDGFAEYPKLAKLLAAKDELVESRKTPPMHIQADLRTFDLRKLGTKFDLIYIDPPWEEYARRAAPFVVGGKKSPRGSSSSSASPSSSSTTDATSSQLDQLWRYEDLEALPIGEIGSVPSFVFLWCGSGGRVTEDASQGALHVEDGRRLLRKWGYRRCEEVCWVKTNKQGPQIQPDLPTSATSLLVRAKEHCLMGIKGSVRRNRDGHIIHCNVHTDLVVAEQPTNPLSTAKPEEMYKIMEQFCLGRRRLELFGCPRNIRPGWVTVGKDLPPTNYDMTAYINWMSVPGVNPDGTPCAGHLLGSTPLIEDLRPKTPPREQREREAQKGG-GSGVRGGGIEG--GSSPFRPRSGSLPSMRPQSGQALPHHHHHCRHQHFERAQHFHQQQMPQQAYFHQQQYEQFYDHGEQQYRQCQRNDEALQGFYSPTIEQHQQHQRKQQ 529
            P+P P   H +    +  S + +LM P   H++VKRRNLFLQ FDEQG+ QE++ST LRH AFEVKNDYSQHFL+TRERPQNFIRD TVEDGFAEYPKLAKLL+AK  +VE+RKTP M+++ADLRTFDLR LGTKFD+IYIDPPWEEY RRAAPFV+ GK            PS  S T   S QLD++W +EDLE+LPI EIG +PSFVFLWCGSGGR+TE ++QGALHVEDGRRLL+KWGYRRCEE+CWVKTNK     QP+L TSATSL VR KEHCLMGIKGSVRRNRDGHIIHCNVHTDLVV EQP +PLSTAKPEE+Y IMEQFCLGRRRLELFGC RNIRPGWVTVGKD+P T YD   Y   M  PG+NPDGT CAGHL+GST LIEDLRPKTPPREQREREA  G     V  G ++    SSP RPRS ++PS+ PQ  Q+L H + H +H  +E+   + QQQ  Q  ++H   YE  + H E QY+     DE      S     H +H R++Q
Sbjct:    5 PMPPPQKRHSTCGQGKGYSHAKSLMAPSTSHVFVKRRNLFLQTFDEQGELQEEESTSLRHNAFEVKNDYSQHFLQTRERPQNFIRDVTVEDGFAEYPKLAKLLSAKQHIVETRKTPAMYVKADLRTFDLRSLGTKFDIIYIDPPWEEYTRRAAPFVLNGK------------PSVCSETCDASLQLDEVWGHEDLESLPIDEIGELPSFVFLWCGSGGRITEGSAQGALHVEDGRRLLKKWGYRRCEEICWVKTNKHCQHSQPELSTSATSLFVRTKEHCLMGIKGSVRRNRDGHIIHCNVHTDLVVGEQPIDPLSTAKPEEIYTIMEQFCLGRRRLELFGCSRNIRPGWVTVGKDVPGTTYDARTYSRLMEEPGLNPDGTMCAGHLVGSTVLIEDLRPKTPPREQREREAAMGMLRKAVLRGRMDSLCRSSP-RPRSRTVPSVSPQYVQSL-HFNKHQKHPEWEQ---YAQQQAVQGQFWH--IYENGF-HNEGQYQGFGIYDETSINLSS---FDHSEHHREEQ 507
The following BLAST results are available for this feature:
BLAST of NO07G02450.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1
Match NameE-valueIdentityDescription
EWM27127.16.200e-17764.45methyltransferase-like protein 1 [Nannochloropsis ... [more]
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO07G02450NO07G02450Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO07G02450.1NO07G02450.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO07G02450.1.cds1NO07G02450.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO07G02450.1.cds2NO07G02450.1.cds2Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO07G02450.1 ID=NO07G02450.1|Name=NO07G02450.1|organism=Nannochloropsis oceanica|type=mRNA|length=1683bp
ATGGAACTGTCGCCGCCCCTACCATCACCATGCCACGCCCACCCCTCCGC
ATCATCTTACGAGTGGCGCTCGTCCTCAACGGCGCTCATGCCTCCACCGC
CGCCCCACATGTATGTCAAGCGACGCAACTTGTTTCTGCAAGCTTTTGAT
GAGCAAGGCCAAGCCCAAGAGGACGACAGCACTGTTCTCCGCCACGGCGC
CTTTGAGGTAAAGAATGACTATAGTCAACATTTCTTGGAGACTCGCGAGC
GGCCACAAAACTTTATCCGGGATAAGACTGTCGAGGACGGTTTTGCTGAG
TACCCAAAGCTAGCCAAGCTCCTCGCGGCCAAGGACGAGTTGGTGGAGAG
TCGCAAGACGCCGCCCATGCACATCCAGGCCGACCTGAGGACGTTTGATT
TGCGGAAATTGGGCACCAAATTTGATCTGATTTACATTGATCCACCCTGG
GAGGAGTACGCCCGTCGAGCGGCACCCTTTGTGGTGGGAGGCAAGAAGAG
TCCTAGGGGGTCGTCATCGTCGTCAGCCTCTCCCTCGTCTTCTAGCACCA
CGGATGCAACATCATCGCAACTTGATCAATTATGGCGGTATGAGGATTTG
GAGGCCCTTCCAATTGGGGAGATTGGGAGTGTCCCTAGCTTTGTGTTTTT
ATGGTGCGGCTCGGGAGGTCGGGTCACTGAGGACGCGTCGCAGGGGGCTT
TGCACGTCGAAGACGGTCGACGCCTGCTTAGAAAGTGGGGCTACCGACGC
TGTGAAGAAGTCTGCTGGGTCAAAACAAATAAACAAGGTCCTCAGATCCA
GCCTGACTTGCCAACATCTGCCACCAGCTTGTTGGTCCGCGCCAAGGAGC
ATTGCCTGATGGGTATCAAAGGCTCGGTGCGTCGCAACAGGGATGGACAC
ATTATCCATTGCAACGTACACACGGACCTGGTGGTAGCAGAGCAGCCGAC
AAACCCGCTCTCGACAGCCAAGCCCGAAGAAATGTACAAAATCATGGAGC
AATTCTGCTTGGGTCGACGTCGTTTGGAGCTCTTTGGTTGCCCGCGGAAT
ATTCGGCCGGGGTGGGTGACGGTTGGCAAGGACTTGCCGCCCACGAATTA
CGACATGACTGCATATATAAATTGGATGAGCGTGCCAGGCGTAAACCCGG
ACGGTACTCCTTGTGCTGGCCATTTGTTAGGGTCTACACCTTTGATTGAA
GACCTGCGGCCCAAGACGCCTCCTCGAGAGCAAAGGGAAAGGGAGGCGCA
AAAAGGGGGCGGTAGTGGTGTTCGAGGGGGAGGGATAGAAGGGGGCTCTT
CGCCCTTTCGACCTCGCAGTGGAAGTCTCCCTTCCATGCGGCCTCAGTCA
GGGCAGGCTTTGCCGCATCATCACCATCATTGCCGTCATCAACATTTTGA
GCGGGCGCAGCATTTTCACCAGCAGCAGATGCCGCAACAGGCATACTTTC
ACCAGCAGCAGTACGAGCAATTCTACGACCACGGGGAACAGCAATACCGT
CAATGTCAACGCAATGATGAAGCGCTGCAAGGCTTTTATTCTCCTACTAT
CGAGCAGCATCAACAGCACCAGCGCAAGCAGCAACAGTGCCAGCGGCAAC
AGAATCAGCAAGGCATGGACATGGTGGTGCGCGGGGACGCGGCCGAGACC
GTCCGCCGCTCCAGCACCCATCTTATAATGTAG
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protein sequence of NO07G02450.1

>NO07G02450.1-protein ID=NO07G02450.1-protein|Name=NO07G02450.1|organism=Nannochloropsis oceanica|type=polypeptide|length=561bp
MELSPPLPSPCHAHPSASSYEWRSSSTALMPPPPPHMYVKRRNLFLQAFD
EQGQAQEDDSTVLRHGAFEVKNDYSQHFLETRERPQNFIRDKTVEDGFAE
YPKLAKLLAAKDELVESRKTPPMHIQADLRTFDLRKLGTKFDLIYIDPPW
EEYARRAAPFVVGGKKSPRGSSSSSASPSSSSTTDATSSQLDQLWRYEDL
EALPIGEIGSVPSFVFLWCGSGGRVTEDASQGALHVEDGRRLLRKWGYRR
CEEVCWVKTNKQGPQIQPDLPTSATSLLVRAKEHCLMGIKGSVRRNRDGH
IIHCNVHTDLVVAEQPTNPLSTAKPEEMYKIMEQFCLGRRRLELFGCPRN
IRPGWVTVGKDLPPTNYDMTAYINWMSVPGVNPDGTPCAGHLLGSTPLIE
DLRPKTPPREQREREAQKGGGSGVRGGGIEGGSSPFRPRSGSLPSMRPQS
GQALPHHHHHCRHQHFERAQHFHQQQMPQQAYFHQQQYEQFYDHGEQQYR
QCQRNDEALQGFYSPTIEQHQQHQRKQQQCQRQQNQQGMDMVVRGDAAET
VRRSSTHLIM*
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mRNA from alignment at chr7:709339..711184-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO07G02450.1 ID=NO07G02450.1|Name=NO07G02450.1|organism=Nannochloropsis oceanica|type=mRNA|length=1846bp|location=Sequence derived from alignment at chr7:709339..711184- (Nannochloropsis oceanica)
ATGGAACTGTCGCCGCCCCTACCATCACCATGCCACGCCCACCCCTCCGC
ATCATCTTACGAGTGGCGCTCGTCCTCAACGGCGCTCATGCCTCCACCGC
CGCCCCACATGTATGTCAAGCGACGCAACTTGTTTCTGCAAGCTTTTGAT
GAGCAAGGCCAAGCCCAAGAGGACGACAGCACTGTTCTCCGCCACGGCGC
CTTTGAGGTAAAGAATGACTATAGTCAACATTTCTTGGAGACTCGCGAGC
GGCCACAAAACTTTATCCGGGATAAGACTGTCGAGGACGGTTTTGCTGAG
TACCCAAAGCTAGCCAAGCTCCTCGCGGCCAAGGACGAGTTGGTGGAGAG
TCGCAAGACGCCGCCCATGCACATCCAGGCCGACCTGAGGACGTTTGATT
TGCGGAAATTGGGCACCAAATTTGATCTGATTTACATTGATCCACCCTGG
GAGGAGTACGCCCGTCGAGCGGCACCCTTTGTGGTGGGAGGCAAGAAGAG
TCCTAGGGGGTCGTCATCGTCGTCAGCCTCTCCCTCGTCTTCTAGCACCA
CGGATGCAACATCATCGCAACTTGATCAATTATGGCGGTATGAGGATTTG
GAGGCCCTTCCAATTGGGGAGATTGGGAGTGTCCCTAGCTTTGTGTTTTT
ATGGTGCGGCTCGGGAGGTCGGGTCACTGAGGACGCGTCGCAGGGGGCTT
TGCACGTCGAAGACGGTCGACGCCTGCTTAGAAAGTGGGGCTACCGACGC
TGTGAAGAAGTCTGCTGGGTCAAAACAAATAAACAAGGTCCTCAGATCCA
GCCTGACTTGCCAACATCTGCCACCAGCTTGTTGGTCCGCGCCAAGGAGC
ATTGCCTGATGGGTATCAAAGGCTCGGTGCGTCGCAACAGGGATGGACAC
ATTATCCATTGCAACGTACACACGGACCTGGTGGTAGCAGAGCAGCCGAC
AAACCCGCTCTCGACAGCCAAGCCCGAAGAAATGTACAAAATCATGGAGC
AATTCTGCTTGGGTCGACGTCGTTTGGAGCTCTTTGGTTGCCCGCGGAAT
ATTCGGCCGGGGTGGGTGACGGTTGGCAAGGACTTGCCGCCCACGAATTA
CGACATGACTGCATATATAAATTGGATGAGCGTGCCAGGCGTAAACCCGG
ACGGTACTCCTTGTGCTGGCCATTTGTTAGGGTCTACACCTTTGATTGAA
GACCTGCGGCCCAAGACGCCTCCTCGAGAGCAAAGGGAAAGGGAGGCGCA
AAAAGGGGGCGGTAGTGGTGTTCGAGGGGGAGGGATAGAAGGGGGCTCTT
CGCCCTTTCGACCTCGCAGTGGAAGTCTCCCTTCCATGCGGCCTCAGTCA
GGGCAGGCTTTGCCGCATCATCACCATCATTGCCGTCATCAACATTTTGA
GCGGGCGCAGCATTTTCACCAGCAGCAGATGCCGCAACAGGCATACTTTC
ACCAGCAGCAGTACGAGCAATTCTACGACCACGGGGAACAGCAATACCGT
CAATGTCAACGCAATGATGAAGCGCTGCAAGGCTTTTATTCTCCTACTAT
CGAGCAGCATCAACAGCACCAGCGCAAGCAGCAACAGTGCCAGCGGCAAC
AGAATCAGCAAGGCATGGTCCGTTTTCTCTACTCCTCCCGTTCTTCGCCC
CGGGGATCCATTCCGCATTCTTTCTTGCCTGCTCCTCCCCCTTTCCCCGA
CTCCCAAGGATCTCTCTCCCCGCAAGATCTGCACTCGTCGTACAGCGAAT
GGGATTCACATACCTTTCCATCTGAATTAGGACATGGTGGTGCGCGGGGA
CGCGGCCGAGACCGTCCGCCGCTCCAGCACCCATCTTATAATGTAG
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Coding sequence (CDS) from alignment at chr7:709339..711184-

>NO07G02450.1 ID=NO07G02450.1|Name=NO07G02450.1|organism=Nannochloropsis oceanica|type=CDS|length=1683bp|location=Sequence derived from alignment at chr7:709339..711184- (Nannochloropsis oceanica)
ATGGAACTGTCGCCGCCCCTACCATCACCATGCCACGCCCACCCCTCCGC
ATCATCTTACGAGTGGCGCTCGTCCTCAACGGCGCTCATGCCTCCACCGC
CGCCCCACATGTATGTCAAGCGACGCAACTTGTTTCTGCAAGCTTTTGAT
GAGCAAGGCCAAGCCCAAGAGGACGACAGCACTGTTCTCCGCCACGGCGC
CTTTGAGGTAAAGAATGACTATAGTCAACATTTCTTGGAGACTCGCGAGC
GGCCACAAAACTTTATCCGGGATAAGACTGTCGAGGACGGTTTTGCTGAG
TACCCAAAGCTAGCCAAGCTCCTCGCGGCCAAGGACGAGTTGGTGGAGAG
TCGCAAGACGCCGCCCATGCACATCCAGGCCGACCTGAGGACGTTTGATT
TGCGGAAATTGGGCACCAAATTTGATCTGATTTACATTGATCCACCCTGG
GAGGAGTACGCCCGTCGAGCGGCACCCTTTGTGGTGGGAGGCAAGAAGAG
TCCTAGGGGGTCGTCATCGTCGTCAGCCTCTCCCTCGTCTTCTAGCACCA
CGGATGCAACATCATCGCAACTTGATCAATTATGGCGGTATGAGGATTTG
GAGGCCCTTCCAATTGGGGAGATTGGGAGTGTCCCTAGCTTTGTGTTTTT
ATGGTGCGGCTCGGGAGGTCGGGTCACTGAGGACGCGTCGCAGGGGGCTT
TGCACGTCGAAGACGGTCGACGCCTGCTTAGAAAGTGGGGCTACCGACGC
TGTGAAGAAGTCTGCTGGGTCAAAACAAATAAACAAGGTCCTCAGATCCA
GCCTGACTTGCCAACATCTGCCACCAGCTTGTTGGTCCGCGCCAAGGAGC
ATTGCCTGATGGGTATCAAAGGCTCGGTGCGTCGCAACAGGGATGGACAC
ATTATCCATTGCAACGTACACACGGACCTGGTGGTAGCAGAGCAGCCGAC
AAACCCGCTCTCGACAGCCAAGCCCGAAGAAATGTACAAAATCATGGAGC
AATTCTGCTTGGGTCGACGTCGTTTGGAGCTCTTTGGTTGCCCGCGGAAT
ATTCGGCCGGGGTGGGTGACGGTTGGCAAGGACTTGCCGCCCACGAATTA
CGACATGACTGCATATATAAATTGGATGAGCGTGCCAGGCGTAAACCCGG
ACGGTACTCCTTGTGCTGGCCATTTGTTAGGGTCTACACCTTTGATTGAA
GACCTGCGGCCCAAGACGCCTCCTCGAGAGCAAAGGGAAAGGGAGGCGCA
AAAAGGGGGCGGTAGTGGTGTTCGAGGGGGAGGGATAGAAGGGGGCTCTT
CGCCCTTTCGACCTCGCAGTGGAAGTCTCCCTTCCATGCGGCCTCAGTCA
GGGCAGGCTTTGCCGCATCATCACCATCATTGCCGTCATCAACATTTTGA
GCGGGCGCAGCATTTTCACCAGCAGCAGATGCCGCAACAGGCATACTTTC
ACCAGCAGCAGTACGAGCAATTCTACGACCACGGGGAACAGCAATACCGT
CAATGTCAACGCAATGATGAAGCGCTGCAAGGCTTTTATTCTCCTACTAT
CGAGCAGCATCAACAGCACCAGCGCAAGCAGCAACAGTGCCAGCGGCAAC
AGAATCAGCAAGGCATGGACATGGTGGTGCGCGGGGACGCGGCCGAGACC
GTCCGCCGCTCCAGCACCCATCTTATAATGTAG
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Synonyms
Publications