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Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
chr7 | genome | chr7:707139..708867 + |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
BLAST of NO07G02440.1 vs.
Match: EWM27131.1 (ornithine aminotransferase [Nannochloropsis gaditana]) HSP 1 Score: 721.5 bits (1861), Expect = 1.600e-204 Identity = 347/438 (79.22%), Postives = 393/438 (89.73%), Query Frame = 0
Query: 11 QLMRRQAPST--ISNSSRQRLLSSTAANTGATKSEKFMDLEDKHGAHNYHPLPVVLSRGQGVHVWDVEGNRYLDFLSAYSAVNQGHCHPKIVDALVKQASKLTLASRAFYTDALGEYQRFVTGYFGYDRVLPMNTGVEGGETAVKLARRWGYEVKGIPTDQAQIVFARGNFWGRTLGAISSSTDPSSRKGFGPFVPGFDLVDYDDPDALEALFEKEAARIAGFMVEPIQGEAGVVVPQEGYMKKIKAICDKYNVLLIADEVQTGLGRTGKLLASEWDETKPDILVLGKALSGGVMPVSAVLASDEVMLTIKPGEHGSTFGGNPLACKVATAALEVLRDEKLADNAMVMGERFRAGLRRISSRGLVEIVRGRGLLNAMVIEDRKGDGGPAWDICLELKRHGLLAKPTHGNIIRLAPPLSINAGQIDEALGIVEASLKKF 447
Q + QA +T I + R+RL SS AA +K++++M LED HGAHNYHPLPVVLSRGQGVHVWDV+ N+YLDFLSAYSAVNQGHCHPKI+ AL +QASKLTLASRAFYTDALGEYQ+F+T YFGYDRVLPMNTGVEGGETAVKLARRWGY+VK IP DQA +VFARGNFWGRTLGAISSSTDPSSRKGFGPF+PGFDL+DYDDP A EAL E++ RIA FMVEPIQGEAGVVVPQE Y+KKIKAIC+K+N+LLIADEVQTGLGRTGKLLASEWD TKPDILVLGKALSGGV+PVSAVLAS+EVMLTI+PGEHGSTFGGNPLACKVA AAL VL+DEKL +N+M+MGERFR+GL+ I + GL+E VRGRGL+NAMVI DRKGDGGPAWD+CL LK +G+LAKPTHGNIIRLAPPL I+A Q+D+AL IVE+++KKF
Sbjct: 19 QRLNYQANTTEDILSGGRRRLFSSMAAKAVQSKADRYMQLEDLHGAHNYHPLPVVLSRGQGVHVWDVDNNKYLDFLSAYSAVNQGHCHPKIIAALTEQASKLTLASRAFYTDALGEYQQFITNYFGYDRVLPMNTGVEGGETAVKLARRWGYDVKKIPRDQAMVVFARGNFWGRTLGAISSSTDPSSRKGFGPFIPGFDLIDYDDPAAFEALCERKGRRIAAFMVEPIQGEAGVVVPQENYLKKIKAICEKHNILLIADEVQTGLGRTGKLLASEWDSTKPDILVLGKALSGGVLPVSAVLASNEVMLTIQPGEHGSTFGGNPLACKVAAAALAVLQDEKLVENSMIMGERFRSGLKAIPANGLIESVRGRGLMNAMVIADRKGDGGPAWDVCLMLKEYGMLAKPTHGNIIRLAPPLCIDADQVDQALDIVESAIKKF 456
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO07G02440.1 ID=NO07G02440.1|Name=NO07G02440.1|organism=Nannochloropsis oceanica|type=mRNA|length=1347bp ATGGCAAGCAGTACGAGCCGCGTGCTCACGCAGCTGATGCGGCGTCAGGC TCCCAGTACCATCAGCAACAGCAGCAGACAGAGACTCTTGTCGTCGACTG CGGCAAATACTGGCGCGACCAAGTCTGAGAAATTCATGGATCTTGAGGAT AAACACGGAGCACACAACTACCACCCGTTACCTGTGGTGCTCTCCCGGGG CCAAGGCGTGCATGTGTGGGATGTGGAAGGCAACCGGTATCTCGATTTTT TGTCCGCCTACTCCGCCGTGAACCAAGGGCATTGTCACCCCAAGATTGTC GACGCGCTCGTGAAGCAAGCCAGCAAATTGACTTTAGCCTCTCGGGCATT TTATACGGATGCGTTGGGGGAGTACCAGCGGTTTGTGACGGGCTATTTTG GATATGATCGTGTACTGCCCATGAATACCGGCGTTGAGGGCGGCGAGACG GCAGTGAAACTCGCCCGTCGTTGGGGCTACGAAGTGAAAGGCATCCCTAC CGATCAAGCGCAGATCGTCTTCGCTCGCGGTAACTTCTGGGGGAGAACCC TGGGTGCGATCTCTTCCTCTACTGATCCCTCCTCTCGAAAGGGTTTCGGG CCCTTTGTTCCTGGCTTTGACCTGGTGGACTACGATGACCCGGATGCCTT GGAAGCCCTGTTTGAGAAGGAGGCGGCGAGGATCGCGGGTTTTATGGTTG AACCGATTCAGGGGGAGGCGGGAGTGGTGGTTCCGCAGGAGGGATACATG AAGAAGATCAAAGCGATTTGCGATAAGTACAATGTGCTTTTGATTGCCGA TGAGGTCCAGACGGGGTTGGGTAGAACGGGAAAGTTGCTCGCGTCGGAGT GGGATGAGACGAAGCCGGATATTTTGGTGCTGGGGAAGGCGTTGTCTGGC GGGGTGATGCCTGTGTCGGCGGTGTTGGCAAGTGACGAAGTCATGCTCAC CATTAAACCGGGGGAGCACGGGTCGACATTTGGGGGGAACCCGCTCGCGT GTAAAGTTGCAACGGCGGCTTTGGAAGTACTGAGGGATGAGAAGCTGGCG GATAATGCGATGGTGATGGGGGAGAGGTTTAGAGCGGGCTTGAGGCGGAT CTCGAGTCGGGGGTTGGTGGAGATCGTGAGGGGCAGGGGGCTGTTGAATG CCATGGTGATTGAGGACCGAAAGGGGGATGGAGGACCGGCATGGGACATA TGTTTGGAGTTAAAGAGGCATGGGTTGTTGGCAAAACCGACGCATGGGAA TATCATTCGCCTAGCCCCGCCACTAAGTATCAACGCTGGGCAAATCGATG AGGCTCTGGGAATTGTTGAGGCGTCTTTGAAGAAGTTCATGCGTTAG back to topprotein sequence of NO07G02440.1 >NO07G02440.1-protein ID=NO07G02440.1-protein|Name=NO07G02440.1|organism=Nannochloropsis oceanica|type=polypeptide|length=449bp MASSTSRVLTQLMRRQAPSTISNSSRQRLLSSTAANTGATKSEKFMDLED KHGAHNYHPLPVVLSRGQGVHVWDVEGNRYLDFLSAYSAVNQGHCHPKIV DALVKQASKLTLASRAFYTDALGEYQRFVTGYFGYDRVLPMNTGVEGGET AVKLARRWGYEVKGIPTDQAQIVFARGNFWGRTLGAISSSTDPSSRKGFG PFVPGFDLVDYDDPDALEALFEKEAARIAGFMVEPIQGEAGVVVPQEGYM KKIKAICDKYNVLLIADEVQTGLGRTGKLLASEWDETKPDILVLGKALSG GVMPVSAVLASDEVMLTIKPGEHGSTFGGNPLACKVATAALEVLRDEKLA DNAMVMGERFRAGLRRISSRGLVEIVRGRGLLNAMVIEDRKGDGGPAWDI CLELKRHGLLAKPTHGNIIRLAPPLSINAGQIDEALGIVEASLKKFMR* back to topmRNA from alignment at chr7:707139..708867+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO07G02440.1 ID=NO07G02440.1|Name=NO07G02440.1|organism=Nannochloropsis oceanica|type=mRNA|length=1729bp|location=Sequence derived from alignment at chr7:707139..708867+ (Nannochloropsis oceanica) ATGGCAAGCAGTACGAGCCGCGTGCTCACGCAGCTGATGCGGCGTCAGGC
TCCCAGTACCATCAGCAACAGCAGCAGACAGAGACTCTTGTCGTCGACTG
CGGCAAATACTGGCGCGACCAAGTCTGAGAAATTCATGGATCTTGAGGTA
CGCGAGGAAGACGGCAGGAGGGGAGGGAAAGCTGGAGGATAGGTAGTATG
GTGGGCCTTATCATACACAGGCCTAAAAAGCCTCCGTGATTCCTTTTCTT
AGACGTAGGGCCATGTTCATAATATGGGAAATGCGGTCGCGGTAATTAGT
CCGCCTCATGTTTGGATGTATGTAGTTCTAGAAGATGCCCGCCACCTTTT
TCCGTCCCTCGTCTCTCACCATCCTCTTTCCTTCCCCTTACTATTTTACC
ACCACCATCATTCTCAGGATAAACACGGAGCACACAACTACCACCCGTTA
CCTGTGGTGCTCTCCCGGGGCCAAGGCGTGCATGTGTGGGATGTGGAAGG
CAACCGGTATCTCGATTTTTTGTCCGCCTACTCCGCCGTGAACCAAGGGC
ATTGTCACCCCAAGATTGTCGACGCGCTCGTGAAGCAAGCCAGCAAATTG
ACTTTAGCCTCTCGGGCATTTTATACGGATGCGTTGGGGGAGTACCAGCG
GTTTGTGACGGGCTATTTTGGATATGATCGTGTACTGCCCATGAATACCG
GCGTTGAGGGCGGCGAGACGGCAGTGGTGCGTACATCTTGGGTAGTTTGG
GGGCTTTCTACTCTTAATTCAAGTCGTTTTTTTTTTCTGTATTCAATCTG
TGCTTCTTTCATCCCCCATCCCTTTCCCCATTGAACAGAAACTCGCCCGT
CGTTGGGGCTACGAAGTGAAAGGCATCCCTACCGATCAAGCGCAGATCGT
CTTCGCTCGCGGTAACTTCTGGGGGAGAACCCTGGGTGCGATCTCTTCCT
CTACTGATCCCTCCTCTCGAAAGGGTTTCGGGCCCTTTGTTCCTGGCTTT
GACCTGGTGGACTACGATGACCCGGATGCCTTGGAAGCCCTGTTTGAGAA
GGAGGCGGCGAGGATCGCGGGTTTTATGGTTGAACCGATTCAGGGGGAGG
CGGGAGTGGTGGTTCCGCAGGAGGGATACATGAAGAAGATCAAAGCGATT
TGCGATAAGTACAATGTGCTTTTGATTGCCGATGAGGTCCAGACGGGGTT
GGGTAGAACGGGAAAGTTGCTCGCGTCGGAGTGGGATGAGACGAAGCCGG
ATATTTTGGTGCTGGGGAAGGCGTTGTCTGGCGGGGTGATGCCTGTGTCG
GCGGTGTTGGCAAGTGACGAAGTCATGCTCACCATTAAACCGGGGGAGCA
CGGGTCGACATTTGGGGGGAACCCGCTCGCGTGTAAAGTTGCAACGGCGG
CTTTGGAAGTACTGAGGGATGAGAAGCTGGCGGATAATGCGATGGTGATG
GGGGAGAGGTTTAGAGCGGGCTTGAGGCGGATCTCGAGTCGGGGGTTGGT
GGAGATCGTGAGGGGCAGGGGGCTGTTGAATGCCATGGTGATTGAGGACC
GAAAGGGGGATGGAGGACCGGCATGGGACATATGTTTGGAGTTAAAGAGG
CATGGGTTGTTGGCAAAACCGACGCATGGGAATATCATTCGCCTAGCCCC
GCCACTAAGTATCAACGCTGGGCAAATCGATGAGGCTCTGGGAATTGTTG
AGGCGTCTTTGAAGAAGTTCATGCGTTAG back to topCoding sequence (CDS) from alignment at chr7:707139..708867+ >NO07G02440.1 ID=NO07G02440.1|Name=NO07G02440.1|organism=Nannochloropsis oceanica|type=CDS|length=1347bp|location=Sequence derived from alignment at chr7:707139..708867+ (Nannochloropsis oceanica) ATGGCAAGCAGTACGAGCCGCGTGCTCACGCAGCTGATGCGGCGTCAGGC TCCCAGTACCATCAGCAACAGCAGCAGACAGAGACTCTTGTCGTCGACTG CGGCAAATACTGGCGCGACCAAGTCTGAGAAATTCATGGATCTTGAGGAT AAACACGGAGCACACAACTACCACCCGTTACCTGTGGTGCTCTCCCGGGG CCAAGGCGTGCATGTGTGGGATGTGGAAGGCAACCGGTATCTCGATTTTT TGTCCGCCTACTCCGCCGTGAACCAAGGGCATTGTCACCCCAAGATTGTC GACGCGCTCGTGAAGCAAGCCAGCAAATTGACTTTAGCCTCTCGGGCATT TTATACGGATGCGTTGGGGGAGTACCAGCGGTTTGTGACGGGCTATTTTG GATATGATCGTGTACTGCCCATGAATACCGGCGTTGAGGGCGGCGAGACG GCAGTGAAACTCGCCCGTCGTTGGGGCTACGAAGTGAAAGGCATCCCTAC CGATCAAGCGCAGATCGTCTTCGCTCGCGGTAACTTCTGGGGGAGAACCC TGGGTGCGATCTCTTCCTCTACTGATCCCTCCTCTCGAAAGGGTTTCGGG CCCTTTGTTCCTGGCTTTGACCTGGTGGACTACGATGACCCGGATGCCTT GGAAGCCCTGTTTGAGAAGGAGGCGGCGAGGATCGCGGGTTTTATGGTTG AACCGATTCAGGGGGAGGCGGGAGTGGTGGTTCCGCAGGAGGGATACATG AAGAAGATCAAAGCGATTTGCGATAAGTACAATGTGCTTTTGATTGCCGA TGAGGTCCAGACGGGGTTGGGTAGAACGGGAAAGTTGCTCGCGTCGGAGT GGGATGAGACGAAGCCGGATATTTTGGTGCTGGGGAAGGCGTTGTCTGGC GGGGTGATGCCTGTGTCGGCGGTGTTGGCAAGTGACGAAGTCATGCTCAC CATTAAACCGGGGGAGCACGGGTCGACATTTGGGGGGAACCCGCTCGCGT GTAAAGTTGCAACGGCGGCTTTGGAAGTACTGAGGGATGAGAAGCTGGCG GATAATGCGATGGTGATGGGGGAGAGGTTTAGAGCGGGCTTGAGGCGGAT CTCGAGTCGGGGGTTGGTGGAGATCGTGAGGGGCAGGGGGCTGTTGAATG CCATGGTGATTGAGGACCGAAAGGGGGATGGAGGACCGGCATGGGACATA TGTTTGGAGTTAAAGAGGCATGGGTTGTTGGCAAAACCGACGCATGGGAA TATCATTCGCCTAGCCCCGCCACTAAGTATCAACGCTGGGCAAATCGATG AGGCTCTGGGAATTGTTGAGGCGTCTTTGAAGAAGTTCATGCGTTAG back to top
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