NO07G02120.1, NO07G02120.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO07G02120.1
Unique NameNO07G02120.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1754
Alignment locationchr7:630846..632716 -

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Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr7genomechr7:630846..632716 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
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BLAST of NO07G02120.1 vs.
Match: EWM27220.1 (hypothetical protein Naga_100010g108 [Nannochloropsis gaditana])

HSP 1 Score: 186.0 bits (471), Expect = 2.400e-43
Identity = 167/439 (38.04%), Postives = 247/439 (56.26%), Query Frame = 0 
Query:    1 MPPKRASTIKIAAKEEAAKEQEKRMVERMKALTKGLENALLEKSEDAMDIDEDEEEDRTPRPSTARAGARSRTATSTTSTSSRIRSNRSSCGSGSGSKSGMKPSTLVKRKSTSPVERLTKKQAIEEAAQILRVRSSNYSPSATTNASGTTKFQRTMTTSHPSMTFRGRGIPSRRHALSRPVM--TTDEKAETEEDEEDNDVVMPPARQNTRGLVQVSAPAPIRATHAPLVPLLSVRTSGGPSRRSYDKGEE---VGGKQS-------IGTLGHLGHGLFKLLTYAIIILSSVFALHVGVETYKLYTPLCFSDSFSNGQVMTGRPPNAGACKTTWCCPPLLHCHAGRIAGVVAL--EKVANAFGYTSITSTTSSPVPMEVAGG----RREYSMKEPEKPEEAWEDEGG---DDGYSEEMEDKDHWAEQEAMGDTHEHAEE 419
            MPPK++S +K AAKEEA +EQ+KR+ ER K+L+K L+ A   + EDAMD+DE+  E +      AR   R R+A S  S  S   S RSS    S SKS  K S+ VKRKS SPVERLTKKQAIE+A+  ++ RS+ +S S   ++S     ++   +   +   RGRGIPS+R    +PV     +E+ E EE EE+ +VV+ P R     +++VSA    R      VPL +     G +R    + EE   V  +Q+       +G L  LG+ +F+L+ YA++IL+  F LH+  E Y + TPLCF DS+S+G+V++G+  +   CKT   CPPL  CH G+I G+  +  EKV ++    SI+S + + VP  V  G     +  S  E ++ ++A E+EGG   ++  + +  + D  AE+E   +     EE
Sbjct:   30 MPPKKSS-LKSAAKEEAIREQQKRISERTKSLSKALK-AAPTRDEDAMDVDEEGGERQEKEKGRARG--RPRSAGSVKSMDSETTSTRSS--GTSRSKSKTKTSSAVKRKSVSPVERLTKKQAIEDASNAIKARSNAHS-SLMASSSSAFSHRKVSASVQATAPARGRGIPSKRLGAVKPVQLRAKEEEEEEEEAEEEEEVVIAPWRSARHSVLRVSALTRRRVA----VPLAASPQPPGRARADRLRPEEELDVAKEQATENAVKPMGVLLRLGYAMFRLVGYAVVILTVAFTLHLSFEAYHVMTPLCFYDSYSDGKVLSGQ--SGKTCKTVVPCPPLFLCHGGQIRGLAGMIPEKVNDS---ASISSESQTEVPEHVKEGLSLNAQRNSPDEKDQLQDAGEEEGGMGLEEKGNRDSPEVDWKAEEEEENEREGEEEE 452
The following BLAST results are available for this feature:
BLAST of NO07G02120.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1
Match NameE-valueIdentityDescription
EWM27220.12.400e-4338.04hypothetical protein Naga_100010g108 [Nannochlorop... [more]
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO07G02120NO07G02120Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO07G02120.1NO07G02120.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO07G02120.1.cds1NO07G02120.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO07G02120.1.cds2NO07G02120.1.cds2Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO07G02120.1 ID=NO07G02120.1|Name=NO07G02120.1|organism=Nannochloropsis oceanica|type=mRNA|length=1754bp
ACCGGGTCTATCAGGAGACCCGTTCTGTCGCCATCAGTCACCAAGCAACG
TGCGGTCGTGTCACAAGACTTTTCCACGAGAGCGCATCACATATTGAGGT
CACCTTTAGGCTTGTACGGCCTGTTGAGAGCACCGGTAAAATGAGCATAT
GAAACAACTGCTGGCTGGCTTGCTTACCCATCCAGCTCCCTAGCGCCCAC
GTTCGCATGCATGCCTTCAACAACCCCACATATCGCACAACTACCACCAC
AGCTCGTACATCGCTAACAAATCCTTCCCATCATCAGGGAGGATGCCTCC
AAAGAGGGCCTCCACGATAAAAATCGCGGCCAAGGAAGAGGCAGCGAAGG
AACAGGAAAAACGGATGGTTGAGCGGATGAAGGCATTGACGAAGGGCCTG
GAGAATGCACTTTTAGAAAAGAGTGAAGACGCCATGGACATCGACGAAGA
CGAGGAGGAAGACAGGACGCCCCGCCCCAGCACCGCCCGTGCCGGCGCCC
GCTCCCGCACCGCCACCAGCACGACTAGTACATCAAGCAGGATAAGAAGC
AACAGAAGTAGCTGCGGGAGTGGCAGTGGTAGCAAGAGCGGCATGAAACC
GAGCACCTTAGTCAAGCGGAAGAGTACATCGCCAGTCGAGCGATTGACCA
AGAAGCAGGCCATCGAAGAGGCAGCCCAGATCCTCCGAGTCCGCAGCAGC
AATTACTCTCCCTCCGCTACCACAAATGCCTCCGGTACTACGAAGTTTCA
ACGGACCATGACGACGTCCCATCCTTCCATGACTTTTCGAGGCCGTGGTA
TCCCTTCGCGACGGCATGCCCTATCCCGGCCTGTGATGACGACCGACGAG
AAGGCGGAAACAGAGGAGGACGAAGAAGACAATGATGTGGTCATGCCTCC
TGCTCGCCAAAATACCCGAGGACTCGTTCAAGTATCGGCGCCGGCGCCGA
TAAGAGCAACCCATGCTCCTCTTGTGCCCCTGCTGTCCGTCCGCACGAGC
GGAGGCCCGTCACGTCGTTCGTACGATAAGGGCGAGGAAGTGGGGGGAAA
ACAGTCCATTGGTACACTGGGTCATTTGGGCCACGGCCTGTTCAAGCTCC
TAACGTACGCCATCATCATTTTGAGCTCTGTATTTGCCCTCCATGTGGGG
GTCGAAACATATAAACTCTACACGCCGTTGTGCTTCTCCGACTCCTTTAG
CAACGGACAGGTCATGACGGGACGTCCTCCGAATGCGGGGGCATGTAAAA
CCACGTGGTGTTGCCCCCCATTACTCCATTGCCATGCTGGTCGCATCGCG
GGCGTCGTGGCTCTGGAGAAAGTCGCCAACGCCTTTGGCTACACCAGCAT
CACAAGCACCACCAGCAGCCCTGTGCCTATGGAAGTTGCCGGGGGGAGGA
GGGAGTATTCGATGAAGGAACCGGAAAAGCCCGAAGAGGCATGGGAAGAT
GAGGGGGGGGACGATGGATATTCGGAGGAGATGGAGGACAAGGATCATTG
GGCAGAGCAGGAGGCGATGGGAGATACCCACGAGCATGCGGAGGAGCACA
ACGATCTTGAGTACTCGCAAGAGACGGAGCACGGGCAGTGAAGAGGAGTA
TACACCCACCCAGTAAGGATACATGTCAGACTATCAAAGCATAGTAGTAT
ATTATTTATTTTATCTTATTTCAAAATGGCATCGGCCAACTCCACGGGAA
CAATAGATACATACAATGAGCACTAAGAAGAGTGGCAAATGCATTTTGAG
GAGA
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protein sequence of NO07G02120.1

>NO07G02120.1-protein ID=NO07G02120.1-protein|Name=NO07G02120.1|organism=Nannochloropsis oceanica|type=polypeptide|length=433bp
MPPKRASTIKIAAKEEAAKEQEKRMVERMKALTKGLENALLEKSEDAMDI
DEDEEEDRTPRPSTARAGARSRTATSTTSTSSRIRSNRSSCGSGSGSKSG
MKPSTLVKRKSTSPVERLTKKQAIEEAAQILRVRSSNYSPSATTNASGTT
KFQRTMTTSHPSMTFRGRGIPSRRHALSRPVMTTDEKAETEEDEEDNDVV
MPPARQNTRGLVQVSAPAPIRATHAPLVPLLSVRTSGGPSRRSYDKGEEV
GGKQSIGTLGHLGHGLFKLLTYAIIILSSVFALHVGVETYKLYTPLCFSD
SFSNGQVMTGRPPNAGACKTTWCCPPLLHCHAGRIAGVVALEKVANAFGY
TSITSTTSSPVPMEVAGGRREYSMKEPEKPEEAWEDEGGDDGYSEEMEDK
DHWAEQEAMGDTHEHAEEHNDLEYSQETEHGQ*
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mRNA from alignment at chr7:630846..632716-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO07G02120.1 ID=NO07G02120.1|Name=NO07G02120.1|organism=Nannochloropsis oceanica|type=mRNA|length=1871bp|location=Sequence derived from alignment at chr7:630846..632716- (Nannochloropsis oceanica)
ACCGGGTCTATCAGGAGACCCGTTCTGTCGCCATCAGTCACCAAGCAACG
TGCGGTCGTGTCACAAGACTTTTCCACGAGAGCGCATCACATATTGAGGT
CACCTTTAGGCTTGTACGGCCTGTTGAGAGCACCGGTAAAATGAGCATAT
GAAACAACTGCTGGCTGGCTTGCTTACCCATCCAGCTCCCTAGCGCCCAC
GTTCGCATGCATGCCTTCAACAACCCCACATATCGCACAACTACCACCAC
AGCTCGTACATCGCTAACAAATCCTTCCCATCATCAGGGAGGATGCCTCC
AAAGGTACGTGAGCTGAGTACATGGATATACGTGTGGCCAATCTTTTTGC
AAGGAGTAAAACCTTGGCACCTTAAGTGATGATGATTACCTAATTGCTCG
TTCCTGATCCCTACACGTTAGAGGGCCTCCACGATAAAAATCGCGGCCAA
GGAAGAGGCAGCGAAGGAACAGGAAAAACGGATGGTTGAGCGGATGAAGG
CATTGACGAAGGGCCTGGAGAATGCACTTTTAGAAAAGAGTGAAGACGCC
ATGGACATCGACGAAGACGAGGAGGAAGACAGGACGCCCCGCCCCAGCAC
CGCCCGTGCCGGCGCCCGCTCCCGCACCGCCACCAGCACGACTAGTACAT
CAAGCAGGATAAGAAGCAACAGAAGTAGCTGCGGGAGTGGCAGTGGTAGC
AAGAGCGGCATGAAACCGAGCACCTTAGTCAAGCGGAAGAGTACATCGCC
AGTCGAGCGATTGACCAAGAAGCAGGCCATCGAAGAGGCAGCCCAGATCC
TCCGAGTCCGCAGCAGCAATTACTCTCCCTCCGCTACCACAAATGCCTCC
GGTACTACGAAGTTTCAACGGACCATGACGACGTCCCATCCTTCCATGAC
TTTTCGAGGCCGTGGTATCCCTTCGCGACGGCATGCCCTATCCCGGCCTG
TGATGACGACCGACGAGAAGGCGGAAACAGAGGAGGACGAAGAAGACAAT
GATGTGGTCATGCCTCCTGCTCGCCAAAATACCCGAGGACTCGTTCAAGT
ATCGGCGCCGGCGCCGATAAGAGCAACCCATGCTCCTCTTGTGCCCCTGC
TGTCCGTCCGCACGAGCGGAGGCCCGTCACGTCGTTCGTACGATAAGGGC
GAGGAAGTGGGGGGAAAACAGTCCATTGGTACACTGGGTCATTTGGGCCA
CGGCCTGTTCAAGCTCCTAACGTACGCCATCATCATTTTGAGCTCTGTAT
TTGCCCTCCATGTGGGGGTCGAAACATATAAACTCTACACGCCGTTGTGC
TTCTCCGACTCCTTTAGCAACGGACAGGTCATGACGGGACGTCCTCCGAA
TGCGGGGGCATGTAAAACCACGTGGTGTTGCCCCCCATTACTCCATTGCC
ATGCTGGTCGCATCGCGGGCGTCGTGGCTCTGGAGAAAGTCGCCAACGCC
TTTGGCTACACCAGCATCACAAGCACCACCAGCAGCCCTGTGCCTATGGA
AGTTGCCGGGGGGAGGAGGGAGTATTCGATGAAGGAACCGGAAAAGCCCG
AAGAGGCATGGGAAGATGAGGGGGGGGACGATGGATATTCGGAGGAGATG
GAGGACAAGGATCATTGGGCAGAGCAGGAGGCGATGGGAGATACCCACGA
GCATGCGGAGGAGCACAACGATCTTGAGTACTCGCAAGAGACGGAGCACG
GGCAGTGAAGAGGAGTATACACCCACCCAGTAAGGATACATGTCAGACTA
TCAAAGCATAGTAGTATATTATTTATTTTATCTTATTTCAAAATGGCATC
GGCCAACTCCACGGGAACAATAGATACATACAATGAGCACTAAGAAGAGT
GGCAAATGCATTTTGAGGAGA
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Coding sequence (CDS) from alignment at chr7:630846..632716-

>NO07G02120.1 ID=NO07G02120.1|Name=NO07G02120.1|organism=Nannochloropsis oceanica|type=CDS|length=1299bp|location=Sequence derived from alignment at chr7:630846..632716- (Nannochloropsis oceanica)
ATGCCTCCAAAGAGGGCCTCCACGATAAAAATCGCGGCCAAGGAAGAGGC
AGCGAAGGAACAGGAAAAACGGATGGTTGAGCGGATGAAGGCATTGACGA
AGGGCCTGGAGAATGCACTTTTAGAAAAGAGTGAAGACGCCATGGACATC
GACGAAGACGAGGAGGAAGACAGGACGCCCCGCCCCAGCACCGCCCGTGC
CGGCGCCCGCTCCCGCACCGCCACCAGCACGACTAGTACATCAAGCAGGA
TAAGAAGCAACAGAAGTAGCTGCGGGAGTGGCAGTGGTAGCAAGAGCGGC
ATGAAACCGAGCACCTTAGTCAAGCGGAAGAGTACATCGCCAGTCGAGCG
ATTGACCAAGAAGCAGGCCATCGAAGAGGCAGCCCAGATCCTCCGAGTCC
GCAGCAGCAATTACTCTCCCTCCGCTACCACAAATGCCTCCGGTACTACG
AAGTTTCAACGGACCATGACGACGTCCCATCCTTCCATGACTTTTCGAGG
CCGTGGTATCCCTTCGCGACGGCATGCCCTATCCCGGCCTGTGATGACGA
CCGACGAGAAGGCGGAAACAGAGGAGGACGAAGAAGACAATGATGTGGTC
ATGCCTCCTGCTCGCCAAAATACCCGAGGACTCGTTCAAGTATCGGCGCC
GGCGCCGATAAGAGCAACCCATGCTCCTCTTGTGCCCCTGCTGTCCGTCC
GCACGAGCGGAGGCCCGTCACGTCGTTCGTACGATAAGGGCGAGGAAGTG
GGGGGAAAACAGTCCATTGGTACACTGGGTCATTTGGGCCACGGCCTGTT
CAAGCTCCTAACGTACGCCATCATCATTTTGAGCTCTGTATTTGCCCTCC
ATGTGGGGGTCGAAACATATAAACTCTACACGCCGTTGTGCTTCTCCGAC
TCCTTTAGCAACGGACAGGTCATGACGGGACGTCCTCCGAATGCGGGGGC
ATGTAAAACCACGTGGTGTTGCCCCCCATTACTCCATTGCCATGCTGGTC
GCATCGCGGGCGTCGTGGCTCTGGAGAAAGTCGCCAACGCCTTTGGCTAC
ACCAGCATCACAAGCACCACCAGCAGCCCTGTGCCTATGGAAGTTGCCGG
GGGGAGGAGGGAGTATTCGATGAAGGAACCGGAAAAGCCCGAAGAGGCAT
GGGAAGATGAGGGGGGGGACGATGGATATTCGGAGGAGATGGAGGACAAG
GATCATTGGGCAGAGCAGGAGGCGATGGGAGATACCCACGAGCATGCGGA
GGAGCACAACGATCTTGAGTACTCGCAAGAGACGGAGCACGGGCAGTGA
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Synonyms
Publications