NO07G01910.1, NO07G01910.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO07G01910.1
Unique NameNO07G01910.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1434
Alignment locationchr7:561474..563096 -

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Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr7genomechr7:561474..563096 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
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BLAST of NO07G01910.1 vs.
Match: EWM27204.1 (aspartate aminotransferase [Nannochloropsis gaditana])

HSP 1 Score: 751.5 bits (1939), Expect = 1.600e-213
Identity = 369/439 (84.05%), Postives = 400/439 (91.12%), Query Frame = 0 
Query:   39 MVSTATLLLIRRAGTRHALASGRMSFLSPMAAGARAASTFANVPLGPPDPIFGLTDAFNKDAFPKKVSLGVGAYRDDKGKPHVLESVRLAEKKVLEAKMNHEYAGIQGVGEYVRLALEFAYGADSAALKEKRIAGVQTISGTGACRLAGDFYARFLGKGSPLYLPDPTWGNHIPIYKDAGLEVKQYRYFDPKTNGLDFKGVLDDVNSAPTGSIFLLHACAHNPTGVDPSEEQWKELSALFKKRGHAILFDAAYLGFASGNADKDAFALRQFAADGHSFLMAQSFAKNFGLYGERVGTLSAVCASAEEAKRVDSQLKILIRPLYSNPPIYGARLVATILQDHELRPLFYKECKAMADRIIEMRALLRATLEKLGSKLPWQHVTDQIGMFCFTGLRPAEVAELKEKYHIYITNDGRISIAGLNSANVQYVAESFHAVTSKR 478
            M    +LLL ++    H   + R   L   AA  RA STFAN+PLGPPDPIFGLTDAFNKD  PKKVSLGVGAYR DKGKPHVLESVR AEKKVLEAKMNHEYAGIQGVGEYV+LALEFAYGADS ALKEKR+AG QTISGTGACRLAG+FYARF+GKGSPLYLP PTWGNH+PI++DAGLEVK+YRYFDP+TNGLDFKGVL+DVN AP GSIFLLHACAHNPTGVDPSEEQW+ELSALFK++GHAILFDAAYLGFASGN +KDAFALR FA +GH+FLMAQSFAKNFGLYGERVGTLSAVCASAEEAKRV+SQLKILIRP+YSNPPIYGARLVATIL D EL+PLFYK+CKAMADRIIEMR+LLR ++EKLGSKL W+HVTDQIGMFCFTGLRPAEVAELKEKYHIYIT+DGRISIAGLN+ANVQYVA SFHAVTSKR
Sbjct:    1 MAHANSLLLFQKVAFCHTNLALR-KILPSFAASNRAGSTFANIPLGPPDPIFGLTDAFNKDTSPKKVSLGVGAYRGDKGKPHVLESVRRAEKKVLEAKMNHEYAGIQGVGEYVQLALEFAYGADSTALKEKRVAGSQTISGTGACRLAGEFYARFMGKGSPLYLPSPTWGNHVPIFRDAGLEVKRYRYFDPETNGLDFKGVLEDVNQAPEGSIFLLHACAHNPTGVDPSEEQWRELSALFKRKGHAILFDAAYLGFASGNVEKDAFALRHFAMEGHNFLMAQSFAKNFGLYGERVGTLSAVCASAEEAKRVESQLKILIRPMYSNPPIYGARLVATILTDPELKPLFYKDCKAMADRIIEMRSLLRYSMEKLGSKLSWRHVTDQIGMFCFTGLRPAEVAELKEKYHIYITDDGRISIAGLNTANVQYVAASFHAVTSKR 438
The following BLAST results are available for this feature:
BLAST of NO07G01910.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1
Match NameE-valueIdentityDescription
EWM27204.11.600e-21384.05aspartate aminotransferase [Nannochloropsis gadita... [more]
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO07G01910NO07G01910Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO07G01910.1NO07G01910.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO07G01910.1.cds1NO07G01910.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO07G01910.1.cds2NO07G01910.1.cds2Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO07G01910.1 ID=NO07G01910.1|Name=NO07G01910.1|organism=Nannochloropsis oceanica|type=mRNA|length=1434bp
ATGCTGGCGAGATCCTCGTGGGACTGGCTTGGCTTAGCCGGTCAAGCTGT
ACATGGTCCACCCACTAAGTATCTCACACTGTTGCCCTCCACTCCACTTG
ATCATAGGCCCCAAATGGTGTCTACCGCAACGCTGCTCTTGATCCGAAGG
GCAGGCACCCGTCACGCGCTGGCTAGCGGCCGCATGTCGTTCTTATCGCC
CATGGCGGCCGGCGCCCGTGCCGCGTCGACGTTTGCAAACGTGCCACTGG
GACCTCCCGACCCCATCTTTGGGTTGACGGACGCCTTCAACAAGGACGCT
TTCCCCAAGAAGGTCAGCCTCGGGGTGGGCGCTTACCGTGACGACAAGGG
CAAACCGCACGTGTTGGAATCGGTGCGACTGGCGGAGAAGAAGGTACTGG
AGGCCAAGATGAACCACGAGTACGCCGGCATCCAAGGAGTTGGTGAATAC
GTGCGGCTGGCGCTTGAATTTGCCTATGGCGCCGATTCGGCCGCGCTCAA
GGAGAAACGCATTGCGGGGGTGCAGACCATCTCGGGCACGGGCGCCTGCC
GGTTGGCGGGGGATTTCTATGCCCGCTTTTTGGGCAAGGGGAGCCCGTTG
TATCTGCCTGACCCGACGTGGGGCAACCACATCCCTATCTACAAGGATGC
AGGGTTGGAGGTGAAGCAATACCGGTATTTCGACCCCAAGACCAATGGGC
TGGATTTTAAGGGTGTGTTGGATGACGTGAATTCGGCGCCGACCGGCTCT
ATCTTTTTATTGCACGCCTGCGCACATAACCCCACGGGGGTGGACCCTTC
GGAGGAGCAGTGGAAGGAACTCTCCGCTCTGTTCAAGAAGAGGGGACATG
CCATCCTCTTTGACGCAGCCTACCTGGGTTTTGCCTCCGGAAATGCGGAC
AAGGATGCTTTTGCCTTGCGGCAATTTGCGGCTGATGGGCATTCGTTCTT
GATGGCGCAGTCGTTTGCGAAGAACTTCGGGTTGTACGGGGAGCGTGTGG
GGACCCTGTCCGCGGTCTGCGCCAGCGCTGAGGAGGCCAAGCGTGTTGAT
TCTCAATTGAAGATCTTGATTCGGCCTCTGTATTCCAACCCGCCTATCTA
TGGTGCTCGTCTTGTGGCCACTATCTTGCAGGACCATGAGCTGAGACCAT
TGTTCTACAAGGAATGCAAGGCCATGGCCGACCGTATCATAGAGATGCGC
GCCCTGCTCCGAGCCACACTGGAGAAGTTGGGCTCGAAACTACCGTGGCA
GCATGTGACGGATCAGATTGGTATGTTTTGCTTTACGGGCCTCCGTCCTG
CGGAGGTGGCGGAGCTGAAGGAAAAGTATCACATTTACATCACCAACGAC
GGTCGTATCTCCATTGCGGGACTCAACTCCGCTAACGTGCAGTACGTTGC
TGAGAGCTTCCACGCTGTCACTTCCAAGCGTTGA
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protein sequence of NO07G01910.1

>NO07G01910.1-protein ID=NO07G01910.1-protein|Name=NO07G01910.1|organism=Nannochloropsis oceanica|type=polypeptide|length=478bp
MLARSSWDWLGLAGQAVHGPPTKYLTLLPSTPLDHRPQMVSTATLLLIRR
AGTRHALASGRMSFLSPMAAGARAASTFANVPLGPPDPIFGLTDAFNKDA
FPKKVSLGVGAYRDDKGKPHVLESVRLAEKKVLEAKMNHEYAGIQGVGEY
VRLALEFAYGADSAALKEKRIAGVQTISGTGACRLAGDFYARFLGKGSPL
YLPDPTWGNHIPIYKDAGLEVKQYRYFDPKTNGLDFKGVLDDVNSAPTGS
IFLLHACAHNPTGVDPSEEQWKELSALFKKRGHAILFDAAYLGFASGNAD
KDAFALRQFAADGHSFLMAQSFAKNFGLYGERVGTLSAVCASAEEAKRVD
SQLKILIRPLYSNPPIYGARLVATILQDHELRPLFYKECKAMADRIIEMR
ALLRATLEKLGSKLPWQHVTDQIGMFCFTGLRPAEVAELKEKYHIYITND
GRISIAGLNSANVQYVAESFHAVTSKR*
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mRNA from alignment at chr7:561474..563096-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO07G01910.1 ID=NO07G01910.1|Name=NO07G01910.1|organism=Nannochloropsis oceanica|type=mRNA|length=1623bp|location=Sequence derived from alignment at chr7:561474..563096- (Nannochloropsis oceanica)
ATGCTGGCGAGATCCTCGTGGGACTGGCTTGGCTTAGCCGGTCAAGCTGT
ACATGGTCCACCCACTAAGTATCTCACACTGTTGCCCTCCACTCCACTTG
ATCATAGGCCCCAAATGGTGTCTACCGCAACGCTGCTCTTGATCCGAAGG
GCAGGCACCCGTCACGCGCTGGCTAGCGGCCGCATGTCGTTCTTATCGCC
CATGGCGGCCGGCGCCCGTGCCGCGTCGACGTTTGCAAACGTGCCACTGG
GACCTCCCGACCCCATCTTTGGGTTGACGGACGCCTTCAACAAGGACGCT
TTCCCCAAGAAGGTCAGCCTCGGGGTGGGCGCTTACCGTGACGACAAGGG
CAAACCGCACGTGTTGGAATCGGTGCGACTGGCGGAGAAGAAGGTACTGG
AGGCCAAGATGAACCACGAGTACGCCGGCATCCAAGGAGTTGGTGAATAC
GTGCGGCTGGCGCTTGAATTTGCCTATGGCGCCGATTCGGCCGCGCTCAA
GGAGAAACGCATTGCGGGGGTGCAGACCATCTCGGGCACGGGCGCCTGCC
GGTTGGCGGGGGATTTCTATGCCCGCTTTTTGGGCAAGGGGAGCCCGTTG
TATCTGCCTGACCCGACGTGGGGCAACCACATCCCTATCTACAAGGATGC
AGGGTTGGAGGTGAAGCAATACCGGTATTTCGACCCCAAGACCAATGGGC
TGGATTTTAAGGGTGTGTTGGATGACGTGAATTCGGCGCCGACCGGCTCT
ATCTTTTTATTGCACGCCTGCGCACATAACCCCACGGGGGTGGACCCTTC
GGAGGAGCAGTGGAAGGAACTCTCCGCTCTGTTCAAGAAGAGGGGACATG
CCATCCTCTTTGACGCAGCCTACCTGGGTTTTGCCTCCGGAAATGCGGAC
AAGGATGCTTTTGCCTTGCGGCAATTTGCGGCTGATGGGCATTCGTTCTT
GATGGCGCAGTCGTTTGCGAAGAACTTCGGGTTGTACGGGGAGCGTGTGG
GGACCCTGTCCGCGGTCTGCGCCAGCGCTGAGGAGGCCAAGCGTGTTGAT
TCTCAATTGAAGATCTTGATTCGGCCTCTGTATTCCAACCCGCCTATCTA
TGGTGCTCGTCTTGTGGCCACTATCTTGCAGGGTAAGTAGCGTCAGTTAT
TTCAGGGGGAAGGCGAATGTGTCTAAACGCTATGATTTTGTTTGCATATC
TGTCAGGTGGTTGTAGCTGTGAGTGTGTGGGTACATATGGGAAAGCGAAG
CGAAGCTCGTTCGTAATTCTTTCTCTCACGGCAATCTTCTCACCATACAC
CTTCTTCCTCTCCTTATCTAGACCATGAGCTGAGACCATTGTTCTACAAG
GAATGCAAGGCCATGGCCGACCGTATCATAGAGATGCGCGCCCTGCTCCG
AGCCACACTGGAGAAGTTGGGCTCGAAACTACCGTGGCAGCATGTGACGG
ATCAGATTGGTATGTTTTGCTTTACGGGCCTCCGTCCTGCGGAGGTGGCG
GAGCTGAAGGAAAAGTATCACATTTACATCACCAACGACGGTCGTATCTC
CATTGCGGGACTCAACTCCGCTAACGTGCAGTACGTTGCTGAGAGCTTCC
ACGCTGTCACTTCCAAGCGTTGA
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Coding sequence (CDS) from alignment at chr7:561474..563096-

>NO07G01910.1 ID=NO07G01910.1|Name=NO07G01910.1|organism=Nannochloropsis oceanica|type=CDS|length=1434bp|location=Sequence derived from alignment at chr7:561474..563096- (Nannochloropsis oceanica)
ATGCTGGCGAGATCCTCGTGGGACTGGCTTGGCTTAGCCGGTCAAGCTGT
ACATGGTCCACCCACTAAGTATCTCACACTGTTGCCCTCCACTCCACTTG
ATCATAGGCCCCAAATGGTGTCTACCGCAACGCTGCTCTTGATCCGAAGG
GCAGGCACCCGTCACGCGCTGGCTAGCGGCCGCATGTCGTTCTTATCGCC
CATGGCGGCCGGCGCCCGTGCCGCGTCGACGTTTGCAAACGTGCCACTGG
GACCTCCCGACCCCATCTTTGGGTTGACGGACGCCTTCAACAAGGACGCT
TTCCCCAAGAAGGTCAGCCTCGGGGTGGGCGCTTACCGTGACGACAAGGG
CAAACCGCACGTGTTGGAATCGGTGCGACTGGCGGAGAAGAAGGTACTGG
AGGCCAAGATGAACCACGAGTACGCCGGCATCCAAGGAGTTGGTGAATAC
GTGCGGCTGGCGCTTGAATTTGCCTATGGCGCCGATTCGGCCGCGCTCAA
GGAGAAACGCATTGCGGGGGTGCAGACCATCTCGGGCACGGGCGCCTGCC
GGTTGGCGGGGGATTTCTATGCCCGCTTTTTGGGCAAGGGGAGCCCGTTG
TATCTGCCTGACCCGACGTGGGGCAACCACATCCCTATCTACAAGGATGC
AGGGTTGGAGGTGAAGCAATACCGGTATTTCGACCCCAAGACCAATGGGC
TGGATTTTAAGGGTGTGTTGGATGACGTGAATTCGGCGCCGACCGGCTCT
ATCTTTTTATTGCACGCCTGCGCACATAACCCCACGGGGGTGGACCCTTC
GGAGGAGCAGTGGAAGGAACTCTCCGCTCTGTTCAAGAAGAGGGGACATG
CCATCCTCTTTGACGCAGCCTACCTGGGTTTTGCCTCCGGAAATGCGGAC
AAGGATGCTTTTGCCTTGCGGCAATTTGCGGCTGATGGGCATTCGTTCTT
GATGGCGCAGTCGTTTGCGAAGAACTTCGGGTTGTACGGGGAGCGTGTGG
GGACCCTGTCCGCGGTCTGCGCCAGCGCTGAGGAGGCCAAGCGTGTTGAT
TCTCAATTGAAGATCTTGATTCGGCCTCTGTATTCCAACCCGCCTATCTA
TGGTGCTCGTCTTGTGGCCACTATCTTGCAGGACCATGAGCTGAGACCAT
TGTTCTACAAGGAATGCAAGGCCATGGCCGACCGTATCATAGAGATGCGC
GCCCTGCTCCGAGCCACACTGGAGAAGTTGGGCTCGAAACTACCGTGGCA
GCATGTGACGGATCAGATTGGTATGTTTTGCTTTACGGGCCTCCGTCCTG
CGGAGGTGGCGGAGCTGAAGGAAAAGTATCACATTTACATCACCAACGAC
GGTCGTATCTCCATTGCGGGACTCAACTCCGCTAACGTGCAGTACGTTGC
TGAGAGCTTCCACGCTGTCACTTCCAAGCGTTGA
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Synonyms
Publications