NO07G01810.1, NO07G01810.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO07G01810.1
Unique NameNO07G01810.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1672
Alignment locationchr7:540792..542463 -

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Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr7genomechr7:540792..542463 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
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BLAST of NO07G01810.1 vs.
Match: EWM27198.1 (ATP-NAD kinase, PpnK-type, alpha/beta [Nannochloropsis gaditana])

HSP 1 Score: 605.9 bits (1561), Expect = 7.400e-170
Identity = 297/320 (92.81%), Postives = 303/320 (94.69%), Query Frame = 0 
Query:    1 MAGGHFRRLLLVVKHTPYEMYLQMKSQGKAPLALRWERLKHRHQVHKECVQDLSDLLRRMDVDFSMVGREELDRQHLKNVDLVVAVGGDGTALSCSHFLDDTIPLLGVNSDPSRDDEKATTKRLDERRSFGALCACTASNMFEVIPDILQGQNQAVRRTRIQTVVRDALKETKLPPALNDILVAHPSPAAVSRFRLGFLNDVGDETSHFNVWSSGLWISTATGSSAAMTAAGGNLMDLNSSELQYMVREHLLEAGGEHLKKEGHGMLKPGKTLQMRWNSQHGCVYVDGEHVRHNLQLGDTVSLSADAPPVWVFEKPGGQS 321
            M  GHFRRLLLVVKHTPYEMYLQMKSQGKAPLALRWERLKHRHQVHKECVQDLSDLLRRMD+DFSMVGREELDRQHLKNVDLVVAVGGDGT LSCSHFLDDTIPLLGVNSDPSRDDEK   K+LDERRSFGALCACTASNMFEVIPDIL GQNQA RRTRIQTVVRDALKETKLPPALNDILVAHP PAAVSRFRLGFLN  GDETSHFNVWSSGLWISTATGSSAAMTAAGG LMDL SSELQYMVREHLLEAGGEHL+KEGHGML+PG TLQMRWNSQHGCVYVDG HVRHNLQLGDTVSLSADAPP+W+FEKP G S
Sbjct:    1 MGVGHFRRLLLVVKHTPYEMYLQMKSQGKAPLALRWERLKHRHQVHKECVQDLSDLLRRMDMDFSMVGREELDRQHLKNVDLVVAVGGDGTVLSCSHFLDDTIPLLGVNSDPSRDDEKKVNKKLDERRSFGALCACTASNMFEVIPDILHGQNQAGRRTRIQTVVRDALKETKLPPALNDILVAHPIPAAVSRFRLGFLNSAGDETSHFNVWSSGLWISTATGSSAAMTAAGGVLMDLKSSELQYMVREHLLEAGGEHLEKEGHGMLQPGNTLQMRWNSQHGCVYVDGSHVRHNLQLGDTVSLSADAPPIWLFEKPEGIS 320
The following BLAST results are available for this feature:
BLAST of NO07G01810.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1
Match NameE-valueIdentityDescription
EWM27198.17.400e-17092.81ATP-NAD kinase, PpnK-type, alpha/beta [Nannochloro... [more]
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO07G01810NO07G01810Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO07G01810.1NO07G01810.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO07G01810.1.cds1NO07G01810.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO07G01810.1 ID=NO07G01810.1|Name=NO07G01810.1|organism=Nannochloropsis oceanica|type=mRNA|length=1672bp
ACAGGCCTTGCGGATTAAAGCTCTACATACCATTCCGTTTTCCCCCAACC
CGAGTCCTACCCTTTCCTACGATTCGTCGGCAGCATGGCGGGCGGGCACT
TTCGCAGGCTGCTGCTCGTGGTCAAGCACACGCCGTATGAGATGTACTTG
CAGATGAAGTCGCAAGGCAAGGCGCCTTTGGCATTGCGGTGGGAGCGGCT
CAAGCATCGGCACCAGGTACACAAGGAATGCGTACAAGACCTGAGCGATT
TACTGCGACGCATGGACGTGGACTTCTCCATGGTGGGCCGGGAAGAATTG
GACCGACAGCACCTCAAGAACGTGGATTTGGTAGTTGCTGTGGGTGGGGA
TGGCACGGCCCTTTCGTGCTCCCACTTTTTAGACGATACCATTCCGTTGC
TGGGTGTGAACAGCGACCCCTCCCGGGATGACGAGAAGGCTACTACCAAG
CGACTGGATGAACGCCGGAGTTTTGGAGCTTTATGTGCATGCACTGCCTC
CAACATGTTTGAGGTGATACCGGATATCTTGCAAGGCCAGAACCAGGCCG
TGCGGCGGACGCGCATCCAAACCGTCGTGCGTGATGCCCTGAAAGAAACC
AAACTCCCTCCCGCCTTAAACGACATCCTAGTCGCACACCCCAGCCCCGC
GGCCGTGTCCCGTTTCCGACTTGGATTCCTCAATGATGTCGGGGATGAGA
CCTCGCATTTTAATGTCTGGTCGAGCGGGCTGTGGATTTCGACGGCCACA
GGCTCGTCTGCAGCAATGACGGCTGCGGGAGGGAATTTGATGGATCTGAA
TTCAAGTGAACTCCAGTATATGGTCCGAGAGCATCTACTCGAGGCTGGCG
GGGAGCACTTGAAGAAGGAGGGGCATGGCATGCTTAAGCCGGGTAAGACC
TTGCAGATGCGTTGGAATTCTCAGCATGGGTGCGTGTATGTGGATGGGGA
ACACGTCAGGCACAACTTACAGTTGGGCGATACTGTTAGTTTATCGGCGG
ATGCACCTCCAGTGTGGGTCTTTGAAAAGCCAGGGGGACAGTCGTCTGTG
GCATCCACTTTATCGTCTCCGTGAAGCACGGAAACAAGAGGGGCGACGGT
CAGATGGAAAAGTGATTTTGATCGATAGAGGCGCAGATTTAGGAAAGGTG
ATGCTTTTTGGTGTGTAGAGGAAGCGGATGTATTTGCGTTAGAGAGTGTG
CGGGTATGCATGTATTTGTGTCGTTTGGTTGTCAAGGTGAGGTTTGTAAG
TGCGTGTCAGACTGGAACAATTTGTGACTGTAGCGTCGAAAGAGCAGAAG
AAAAAGAAGAAGAGGAAGGAGTTTGATGAAGAATTTTTTCTCTGGGAAGG
GAAAATGGGCGATTGGTAGTTTTCAGGGAGGAGAAAGGTTGCCAAAGGAG
AGAATCGAGAAAGGAGTGCCAGGACTTAGCTTGCTATTGTTCCGAACTTA
TTGGTCTGACTTTAATTGAGAGGATTATGCAAAGCACAGCAACAAGTGGG
CATGGCTAGAGGAGAGATAGAGATTGAGTGAGTGGGTGAACGAGCAATAG
AGAATGAACGCGTGTGTGAGAGTGTGTGTGTCAGAGAGAGATAGGAATGC
TCGCTGCTTAAAGAGAGGACAATCTACAAAAAAAATTCGCTGAAATAAAA
ATAACTCTAGAATAAACCAATA
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protein sequence of NO07G01810.1

>NO07G01810.1-protein ID=NO07G01810.1-protein|Name=NO07G01810.1|organism=Nannochloropsis oceanica|type=polypeptide|length=330bp
MAGGHFRRLLLVVKHTPYEMYLQMKSQGKAPLALRWERLKHRHQVHKECV
QDLSDLLRRMDVDFSMVGREELDRQHLKNVDLVVAVGGDGTALSCSHFLD
DTIPLLGVNSDPSRDDEKATTKRLDERRSFGALCACTASNMFEVIPDILQ
GQNQAVRRTRIQTVVRDALKETKLPPALNDILVAHPSPAAVSRFRLGFLN
DVGDETSHFNVWSSGLWISTATGSSAAMTAAGGNLMDLNSSELQYMVREH
LLEAGGEHLKKEGHGMLKPGKTLQMRWNSQHGCVYVDGEHVRHNLQLGDT
VSLSADAPPVWVFEKPGGQSSVASTLSSP*
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mRNA from alignment at chr7:540792..542463-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO07G01810.1 ID=NO07G01810.1|Name=NO07G01810.1|organism=Nannochloropsis oceanica|type=mRNA|length=1672bp|location=Sequence derived from alignment at chr7:540792..542463- (Nannochloropsis oceanica)
ACAGGCCTTGCGGATTAAAGCTCTACATACCATTCCGTTTTCCCCCAACC
CGAGTCCTACCCTTTCCTACGATTCGTCGGCAGCATGGCGGGCGGGCACT
TTCGCAGGCTGCTGCTCGTGGTCAAGCACACGCCGTATGAGATGTACTTG
CAGATGAAGTCGCAAGGCAAGGCGCCTTTGGCATTGCGGTGGGAGCGGCT
CAAGCATCGGCACCAGGTACACAAGGAATGCGTACAAGACCTGAGCGATT
TACTGCGACGCATGGACGTGGACTTCTCCATGGTGGGCCGGGAAGAATTG
GACCGACAGCACCTCAAGAACGTGGATTTGGTAGTTGCTGTGGGTGGGGA
TGGCACGGCCCTTTCGTGCTCCCACTTTTTAGACGATACCATTCCGTTGC
TGGGTGTGAACAGCGACCCCTCCCGGGATGACGAGAAGGCTACTACCAAG
CGACTGGATGAACGCCGGAGTTTTGGAGCTTTATGTGCATGCACTGCCTC
CAACATGTTTGAGGTGATACCGGATATCTTGCAAGGCCAGAACCAGGCCG
TGCGGCGGACGCGCATCCAAACCGTCGTGCGTGATGCCCTGAAAGAAACC
AAACTCCCTCCCGCCTTAAACGACATCCTAGTCGCACACCCCAGCCCCGC
GGCCGTGTCCCGTTTCCGACTTGGATTCCTCAATGATGTCGGGGATGAGA
CCTCGCATTTTAATGTCTGGTCGAGCGGGCTGTGGATTTCGACGGCCACA
GGCTCGTCTGCAGCAATGACGGCTGCGGGAGGGAATTTGATGGATCTGAA
TTCAAGTGAACTCCAGTATATGGTCCGAGAGCATCTACTCGAGGCTGGCG
GGGAGCACTTGAAGAAGGAGGGGCATGGCATGCTTAAGCCGGGTAAGACC
TTGCAGATGCGTTGGAATTCTCAGCATGGGTGCGTGTATGTGGATGGGGA
ACACGTCAGGCACAACTTACAGTTGGGCGATACTGTTAGTTTATCGGCGG
ATGCACCTCCAGTGTGGGTCTTTGAAAAGCCAGGGGGACAGTCGTCTGTG
GCATCCACTTTATCGTCTCCGTGAAGCACGGAAACAAGAGGGGCGACGGT
CAGATGGAAAAGTGATTTTGATCGATAGAGGCGCAGATTTAGGAAAGGTG
ATGCTTTTTGGTGTGTAGAGGAAGCGGATGTATTTGCGTTAGAGAGTGTG
CGGGTATGCATGTATTTGTGTCGTTTGGTTGTCAAGGTGAGGTTTGTAAG
TGCGTGTCAGACTGGAACAATTTGTGACTGTAGCGTCGAAAGAGCAGAAG
AAAAAGAAGAAGAGGAAGGAGTTTGATGAAGAATTTTTTCTCTGGGAAGG
GAAAATGGGCGATTGGTAGTTTTCAGGGAGGAGAAAGGTTGCCAAAGGAG
AGAATCGAGAAAGGAGTGCCAGGACTTAGCTTGCTATTGTTCCGAACTTA
TTGGTCTGACTTTAATTGAGAGGATTATGCAAAGCACAGCAACAAGTGGG
CATGGCTAGAGGAGAGATAGAGATTGAGTGAGTGGGTGAACGAGCAATAG
AGAATGAACGCGTGTGTGAGAGTGTGTGTGTCAGAGAGAGATAGGAATGC
TCGCTGCTTAAAGAGAGGACAATCTACAAAAAAAATTCGCTGAAATAAAA
ATAACTCTAGAATAAACCAATA
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Coding sequence (CDS) from alignment at chr7:540792..542463-

>NO07G01810.1 ID=NO07G01810.1|Name=NO07G01810.1|organism=Nannochloropsis oceanica|type=CDS|length=990bp|location=Sequence derived from alignment at chr7:540792..542463- (Nannochloropsis oceanica)
ATGGCGGGCGGGCACTTTCGCAGGCTGCTGCTCGTGGTCAAGCACACGCC
GTATGAGATGTACTTGCAGATGAAGTCGCAAGGCAAGGCGCCTTTGGCAT
TGCGGTGGGAGCGGCTCAAGCATCGGCACCAGGTACACAAGGAATGCGTA
CAAGACCTGAGCGATTTACTGCGACGCATGGACGTGGACTTCTCCATGGT
GGGCCGGGAAGAATTGGACCGACAGCACCTCAAGAACGTGGATTTGGTAG
TTGCTGTGGGTGGGGATGGCACGGCCCTTTCGTGCTCCCACTTTTTAGAC
GATACCATTCCGTTGCTGGGTGTGAACAGCGACCCCTCCCGGGATGACGA
GAAGGCTACTACCAAGCGACTGGATGAACGCCGGAGTTTTGGAGCTTTAT
GTGCATGCACTGCCTCCAACATGTTTGAGGTGATACCGGATATCTTGCAA
GGCCAGAACCAGGCCGTGCGGCGGACGCGCATCCAAACCGTCGTGCGTGA
TGCCCTGAAAGAAACCAAACTCCCTCCCGCCTTAAACGACATCCTAGTCG
CACACCCCAGCCCCGCGGCCGTGTCCCGTTTCCGACTTGGATTCCTCAAT
GATGTCGGGGATGAGACCTCGCATTTTAATGTCTGGTCGAGCGGGCTGTG
GATTTCGACGGCCACAGGCTCGTCTGCAGCAATGACGGCTGCGGGAGGGA
ATTTGATGGATCTGAATTCAAGTGAACTCCAGTATATGGTCCGAGAGCAT
CTACTCGAGGCTGGCGGGGAGCACTTGAAGAAGGAGGGGCATGGCATGCT
TAAGCCGGGTAAGACCTTGCAGATGCGTTGGAATTCTCAGCATGGGTGCG
TGTATGTGGATGGGGAACACGTCAGGCACAACTTACAGTTGGGCGATACT
GTTAGTTTATCGGCGGATGCACCTCCAGTGTGGGTCTTTGAAAAGCCAGG
GGGACAGTCGTCTGTGGCATCCACTTTATCGTCTCCGTGA
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Synonyms
Publications