NO07G01760.1, NO07G01760.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO07G01760.1
Unique NameNO07G01760.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1083
Alignment locationchr7:530009..531351 +

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Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr7genomechr7:530009..531351 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
BLAST of NO07G01760.1 vs.
Match: AQT19705.1 (type two diacylglycerol acyltransferase [Nannochloropsis oceanica])

HSP 1 Score: 735.7 bits (1898), Expect = 6.800e-209
Identity = 360/360 (100.00%), Postives = 360/360 (100.00%), Query Frame = 0
Query:    1 MAKANFPPSARYVNMTQVYATGAHNMPDEDRLKVMNGLSKPLTEAKPGDLGFGDVESMTFCEEFVAIMFLLIIVGSMLWIPIAVLGFALYVRSAMAWVVMLIVFFTLSLHPVPRIHDMVHSPLNHFIFKYFSLKMASDAPLDSAGRYIFVAPPHGVLPMGNLMTVHAMKACGGLEFRGLTTDVALRLPLFRHYLGAIGTIAATRHVAKQYLDKGWSIGISSGGVAEIFEVNNKDEVVLMKERKGFVKLALRTGTPLVACYIFGNTKLLSAWYDDGGVLEGLSRYLKCGVLPLWGRFGLPLMHRHPVLGAMAKPIVVPKVEGEPTQEMIDEYHSLFCQTLVDLFDRYKTLYGWPDKKLLIK 361
            MAKANFPPSARYVNMTQVYATGAHNMPDEDRLKVMNGLSKPLTEAKPGDLGFGDVESMTFCEEFVAIMFLLIIVGSMLWIPIAVLGFALYVRSAMAWVVMLIVFFTLSLHPVPRIHDMVHSPLNHFIFKYFSLKMASDAPLDSAGRYIFVAPPHGVLPMGNLMTVHAMKACGGLEFRGLTTDVALRLPLFRHYLGAIGTIAATRHVAKQYLDKGWSIGISSGGVAEIFEVNNKDEVVLMKERKGFVKLALRTGTPLVACYIFGNTKLLSAWYDDGGVLEGLSRYLKCGVLPLWGRFGLPLMHRHPVLGAMAKPIVVPKVEGEPTQEMIDEYHSLFCQTLVDLFDRYKTLYGWPDKKLLIK
Sbjct:   34 MAKANFPPSARYVNMTQVYATGAHNMPDEDRLKVMNGLSKPLTEAKPGDLGFGDVESMTFCEEFVAIMFLLIIVGSMLWIPIAVLGFALYVRSAMAWVVMLIVFFTLSLHPVPRIHDMVHSPLNHFIFKYFSLKMASDAPLDSAGRYIFVAPPHGVLPMGNLMTVHAMKACGGLEFRGLTTDVALRLPLFRHYLGAIGTIAATRHVAKQYLDKGWSIGISSGGVAEIFEVNNKDEVVLMKERKGFVKLALRTGTPLVACYIFGNTKLLSAWYDDGGVLEGLSRYLKCGVLPLWGRFGLPLMHRHPVLGAMAKPIVVPKVEGEPTQEMIDEYHSLFCQTLVDLFDRYKTLYGWPDKKLLIK 393          
The following BLAST results are available for this feature:
BLAST of NO07G01760.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1
Match NameE-valueIdentityDescription
AQT19705.16.800e-209100.00type two diacylglycerol acyltransferase [Nannochlo... [more]
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO07G01760NO07G01760Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO07G01760.1NO07G01760.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO07G01760.1.cds1NO07G01760.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO07G01760.1.cds2NO07G01760.1.cds2Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO07G01760.1.cds3NO07G01760.1.cds3Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO07G01760.1 ID=NO07G01760.1|Name=NO07G01760.1|organism=Nannochloropsis oceanica|type=mRNA|length=1083bp
ATGGCCAAGGCCAACTTCCCACCCTCGGCACGCTATGTTAATATGACGCA
GGTCTATGCGACAGGTGCTCACAATATGCCGGACGAGGACCGTCTCAAGG
TGATGAATGGACTTTCCAAGCCCTTGACGGAGGCCAAGCCCGGTGATTTG
GGGTTTGGGGATGTGGAGTCCATGACGTTCTGTGAAGAGTTTGTAGCGAT
TATGTTCTTATTGATCATTGTCGGGAGCATGCTTTGGATACCGATTGCAG
TGTTGGGTTTCGCCCTGTATGTCCGCAGCGCAATGGCGTGGGTGGTGATG
CTCATCGTGTTCTTCACCCTGAGCCTGCACCCAGTCCCGCGCATCCATGA
TATGGTTCATTCCCCATTGAATCACTTCATATTCAAGTACTTCAGTCTAA
AAATGGCGAGTGATGCACCACTGGATAGTGCTGGGCGCTATATTTTTGTC
GCTCCGCCACATGGCGTGCTGCCTATGGGGAATCTTATGACGGTGCACGC
GATGAAGGCGTGTGGTGGATTGGAGTTCCGTGGGCTGACGACTGATGTCG
CGCTTAGGCTGCCTTTGTTTCGACACTATTTAGGCGCTATTGGTACTATT
GCCGCGACGAGGCACGTGGCGAAGCAGTACCTCGACAAAGGATGGTCAAT
AGGTATATCTTCGGGCGGAGTCGCGGAGATTTTCGAAGTTAACAATAAGG
ATGAGGTGGTGTTGATGAAGGAGCGAAAGGGCTTTGTGAAGCTTGCCCTT
CGCACGGGGACTCCGTTGGTAGCTTGTTATATTTTTGGGAATACCAAGCT
GTTGTCGGCGTGGTATGATGATGGGGGGGTGTTGGAGGGCCTGTCGCGTT
ATTTGAAATGTGGTGTATTGCCACTTTGGGGTCGCTTTGGTTTGCCGCTT
ATGCACCGTCATCCTGTATTGGGCGCGATGGCAAAGCCGATCGTAGTTCC
CAAGGTGGAGGGAGAGCCCACGCAGGAGATGATTGATGAGTACCATAGTC
TCTTCTGTCAGACGCTGGTCGATCTATTTGATAGATACAAGACCTTGTAT
GGCTGGCCGGACAAGAAGCTGCTTATTAAGTGA
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protein sequence of NO07G01760.1

>NO07G01760.1-protein ID=NO07G01760.1-protein|Name=NO07G01760.1|organism=Nannochloropsis oceanica|type=polypeptide|length=361bp
MAKANFPPSARYVNMTQVYATGAHNMPDEDRLKVMNGLSKPLTEAKPGDL
GFGDVESMTFCEEFVAIMFLLIIVGSMLWIPIAVLGFALYVRSAMAWVVM
LIVFFTLSLHPVPRIHDMVHSPLNHFIFKYFSLKMASDAPLDSAGRYIFV
APPHGVLPMGNLMTVHAMKACGGLEFRGLTTDVALRLPLFRHYLGAIGTI
AATRHVAKQYLDKGWSIGISSGGVAEIFEVNNKDEVVLMKERKGFVKLAL
RTGTPLVACYIFGNTKLLSAWYDDGGVLEGLSRYLKCGVLPLWGRFGLPL
MHRHPVLGAMAKPIVVPKVEGEPTQEMIDEYHSLFCQTLVDLFDRYKTLY
GWPDKKLLIK*
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mRNA from alignment at chr7:530009..531351+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO07G01760.1 ID=NO07G01760.1|Name=NO07G01760.1|organism=Nannochloropsis oceanica|type=mRNA|length=1343bp|location=Sequence derived from alignment at chr7:530009..531351+ (Nannochloropsis oceanica)
ATGGCCAAGGCCAACTTCCCACCCTCGGCACGCTATGTTAATATGACGCA GGTCTATGCGACAGGTGCTCACAATATGCCGGACGAGGACCGTCTCAAGG TGATGAATGGACTTTCCAAGCCCTTGACGGAGGCCAAGCCCGGTGATTTG GGGTTTGGGGATGTGGAGTCCATGACGTTCTGTGAAGAGTTTGTAGCGAT TATGTTCTTATTGATCATTGTCGGGAGCATGCTTTGGATACCGATTGCAG TGTTGGGTTTCGCCCTGTATGTCCGCAGCGCAATGGCGTGGGTGGTGATG CTCATCGTGTTCTTCACCCTGAGCCTGCACCCAGTCCCGCGCATCCATGA TATGGTTCATTCCCCATTGAATCACTTCATATTCAAGTACTTCAGTCTAA AAATGGCGAGTGATGCACCACTGGATAGTGCTGGGCGCTATATTTTTGTC GCTCCGCCACATGGCGTGCTGCCTATGGGGAATCTTATGACGGTGCACGC GATGAAGGCGTGTGGTGGATTGTAAGTTTCTAGGGGTGGGACATACATTT GTCTTTTAATTAAAAAGCACTTTAGAAACTGAGACGTCTTATTTTTCCGA CCATTCTCATTTACAGGGAGTTCCGTGGGCTGACGACTGATGTCGCGCTT AGGCTGCCTTTGTTTCGACACTGTACGTGTGTGGGGGATGGAAGAGGGAT CGTTGTGCGTGAGGAATTCGGGGGGAGGAGAAAAGGCTGCCTTTCCCGTG ACTATTTTTAACAACGTATTTTTATGAGGATACATGTATTTTATAACATG CACTTATCATGCGTGTGTATACAATCTCTTTGCACAGATTTAGGCGCTAT TGGTACTATTGCCGCGACGAGGCACGTGGCGAAGCAGTACCTCGACAAAG GATGGTCAATAGGTATATCTTCGGGCGGAGTCGCGGAGATTTTCGAAGTT AACAATAAGGATGAGGTGGTGTTGATGAAGGAGCGAAAGGGCTTTGTGAA GCTTGCCCTTCGCACGGGGACTCCGTTGGTAGCTTGTTATATTTTTGGGA ATACCAAGCTGTTGTCGGCGTGGTATGATGATGGGGGGGTGTTGGAGGGC CTGTCGCGTTATTTGAAATGTGGTGTATTGCCACTTTGGGGTCGCTTTGG TTTGCCGCTTATGCACCGTCATCCTGTATTGGGCGCGATGGCAAAGCCGA TCGTAGTTCCCAAGGTGGAGGGAGAGCCCACGCAGGAGATGATTGATGAG TACCATAGTCTCTTCTGTCAGACGCTGGTCGATCTATTTGATAGATACAA GACCTTGTATGGCTGGCCGGACAAGAAGCTGCTTATTAAGTGA
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Coding sequence (CDS) from alignment at chr7:530009..531351+

>NO07G01760.1 ID=NO07G01760.1|Name=NO07G01760.1|organism=Nannochloropsis oceanica|type=CDS|length=1083bp|location=Sequence derived from alignment at chr7:530009..531351+ (Nannochloropsis oceanica)
ATGGCCAAGGCCAACTTCCCACCCTCGGCACGCTATGTTAATATGACGCA
GGTCTATGCGACAGGTGCTCACAATATGCCGGACGAGGACCGTCTCAAGG
TGATGAATGGACTTTCCAAGCCCTTGACGGAGGCCAAGCCCGGTGATTTG
GGGTTTGGGGATGTGGAGTCCATGACGTTCTGTGAAGAGTTTGTAGCGAT
TATGTTCTTATTGATCATTGTCGGGAGCATGCTTTGGATACCGATTGCAG
TGTTGGGTTTCGCCCTGTATGTCCGCAGCGCAATGGCGTGGGTGGTGATG
CTCATCGTGTTCTTCACCCTGAGCCTGCACCCAGTCCCGCGCATCCATGA
TATGGTTCATTCCCCATTGAATCACTTCATATTCAAGTACTTCAGTCTAA
AAATGGCGAGTGATGCACCACTGGATAGTGCTGGGCGCTATATTTTTGTC
GCTCCGCCACATGGCGTGCTGCCTATGGGGAATCTTATGACGGTGCACGC
GATGAAGGCGTGTGGTGGATTGGAGTTCCGTGGGCTGACGACTGATGTCG
CGCTTAGGCTGCCTTTGTTTCGACACTATTTAGGCGCTATTGGTACTATT
GCCGCGACGAGGCACGTGGCGAAGCAGTACCTCGACAAAGGATGGTCAAT
AGGTATATCTTCGGGCGGAGTCGCGGAGATTTTCGAAGTTAACAATAAGG
ATGAGGTGGTGTTGATGAAGGAGCGAAAGGGCTTTGTGAAGCTTGCCCTT
CGCACGGGGACTCCGTTGGTAGCTTGTTATATTTTTGGGAATACCAAGCT
GTTGTCGGCGTGGTATGATGATGGGGGGGTGTTGGAGGGCCTGTCGCGTT
ATTTGAAATGTGGTGTATTGCCACTTTGGGGTCGCTTTGGTTTGCCGCTT
ATGCACCGTCATCCTGTATTGGGCGCGATGGCAAAGCCGATCGTAGTTCC
CAAGGTGGAGGGAGAGCCCACGCAGGAGATGATTGATGAGTACCATAGTC
TCTTCTGTCAGACGCTGGTCGATCTATTTGATAGATACAAGACCTTGTAT
GGCTGGCCGGACAAGAAGCTGCTTATTAAGTGA
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Synonyms
Publications