NO07G01550.1, NO07G01550.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO07G01550.1
Unique NameNO07G01550.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1725
Alignment locationchr7:470983..472707 -

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Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr7genomechr7:470983..472707 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
[Close]
BLAST of NO07G01550.1 vs.
Match: EWM27178.1 (ferrochelatase [Nannochloropsis gaditana])

HSP 1 Score: 793.9 bits (2049), Expect = 3.300e-226
Identity = 422/587 (71.89%), Postives = 479/587 (81.60%), Query Frame = 0 
Query:    1 MVTRLHLCHDQSRRSSSDRSSNKGDSGISGSSSSGPTRTTAAGRAGRVVTWGSCLVLTGSLLLATSVEGFLFHQPRGGACSGAVRARTCSPSLSS------SYSSSSSMYLHSFAQCTTRRSSLLTVLQSSATAGSSGGSGSDNTNENLSP------TRLEAAVTMDPPTTGMGLRRRLRPKTQLPAPHAGDKPNVKLGVLLLQLGGPERTEDVEGFLYNLFADPDIIRLPGIISGLQKPLAYVISKRRAPKSKAAYASIGGGSPIVKYTAAQAEGVEKVLREDMGLDAKCYVAMRYWHPFTDEALEQMRQDGVNSVVVVPLYPQFSISTSGSSLRVLQDLFFKDAPRWGQISHTVVPAWYDRPGYVQAMGRLISRELSQFTEEQKAEGSLHVLFSAHGVPQRYIEMGDPYQEQIRKCVELISKEYEAPGVTTHLSYQSRVGPIEWLRPYTDDVIEELGATGIKNLVVVPISFVSEHIETLEEIDIEYRELAHENGIKNWRRVPALNTEPGFIEDLAHMVVEALQTPSISVTEACALNNLDIMPMDGRTNGGQDSDN-NGKLAVLGLAGGVVLDLCSGRGGLAHLLH 575
            MVTR  LC  +S +S   R   K  +G   SS+            G V+TWGSC +LTGSLLLAT+ E F F      +CS        +PSLS+        +++S + L +     +R ++ LTV QS+ ++ +S G+   ++N N +       TRL+AA TMDPPTTG GLRRR+RP+ QLPAPH  DKP+VKLGVLLLQLGGPER EDVEGFLYNLFADPDIIRLPG+ISGLQKPLAYVISKRRAPKSKAAY SIGGGSPIV+YT AQAEGVE+VL+E MGLDAKCYVAMRYWHPFTDEA+EQM +DGVNS+V+VPLYPQFSISTSGSSLRVLQDLFFKD+PRW Q+SHTVVPAWYDRPGYVQAMGRLIS+EL+QFT+EQ+AEG LHVLFSAHGVPQRYIEMGDPYQ+QI++CV+LI++EY AP VTTHLSYQSRVGPIEWLRPYTDD +EELGA G+KNLVVVPISFVSEHIETLEEIDIEYRELAHENGI NWRRVPALNTEPGFIEDLAHMVVEALQ P+ISVTEACALNNLDIMPM G  +GG+D    +G+LAVLGLA GVVLDL SGRGGLAHLLH
Sbjct:    1 MVTRQLLC-TRSTKSGQGRDERKYKAGDRMSST------------GHVLTWGSCFLLTGSLLLATTAEAFFFRS----SCSR-------TPSLSAFSKGGRGRTAASPIVLPTLP--VSRVNAGLTVRQSTGSSSTSSGNTMKSSNPNSNSMEGQKSTRLDAAATMDPPTTGSGLRRRIRPEIQLPAPHVNDKPDVKLGVLLLQLGGPERMEDVEGFLYNLFADPDIIRLPGLISGLQKPLAYVISKRRAPKSKAAYESIGGGSPIVRYTQAQAEGVERVLQE-MGLDAKCYVAMRYWHPFTDEAMEQMIKDGVNSLVIVPLYPQFSISTSGSSLRVLQDLFFKDSPRWNQVSHTVVPAWYDRPGYVQAMGRLISKELAQFTQEQRAEGGLHVLFSAHGVPQRYIEMGDPYQQQIQQCVDLIAQEYAAPDVTTHLSYQSRVGPIEWLRPYTDDTLEELGAAGVKNLVVVPISFVSEHIETLEEIDIEYRELAHENGITNWRRVPALNTEPGFIEDLAHMVVEALQEPAISVTEACALNNLDIMPMGGDKDGGEDGKGLDGRLAVLGLASGVVLDLFSGRGGLAHLLH 560
The following BLAST results are available for this feature:
BLAST of NO07G01550.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1
Match NameE-valueIdentityDescription
EWM27178.13.300e-22671.89ferrochelatase [Nannochloropsis gaditana][more]
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO07G01550NO07G01550Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO07G01550.1NO07G01550.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO07G01550.1.cds1NO07G01550.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO07G01550.1 ID=NO07G01550.1|Name=NO07G01550.1|organism=Nannochloropsis oceanica|type=mRNA|length=1725bp
ATGGTCACTCGACTGCACCTTTGCCACGACCAGAGCCGCCGCAGCAGCAG
CGACCGCAGCAGTAACAAAGGTGATTCCGGCATTAGCGGGAGCAGCAGCA
GTGGGCCTACAAGAACCACGGCAGCAGGACGCGCAGGCCGCGTTGTGACA
TGGGGCTCCTGTCTCGTTCTAACGGGTAGCTTGTTGCTTGCGACATCTGT
GGAGGGTTTCTTATTTCACCAACCTCGCGGCGGCGCTTGCTCGGGCGCTG
TCCGAGCGCGCACCTGCTCGCCGTCTTTATCGTCCTCCTACTCTTCCTCT
TCGTCAATGTATCTACACTCCTTCGCCCAATGCACAACTAGAAGATCATC
TTTGCTAACAGTTCTACAGAGCAGCGCCACGGCCGGGAGCAGCGGCGGCA
GCGGCAGCGACAACACCAACGAGAATCTCAGTCCCACCCGCCTCGAAGCC
GCGGTCACTATGGACCCTCCCACAACCGGTATGGGCCTGCGACGCCGCCT
CCGCCCGAAAACCCAGCTCCCCGCCCCACACGCCGGCGACAAGCCTAATG
TCAAGCTAGGCGTATTACTTCTCCAACTTGGTGGTCCCGAGCGCACCGAG
GACGTGGAAGGGTTCCTGTACAACTTATTTGCCGACCCGGATATTATTCG
TTTGCCTGGTATTATCAGTGGACTACAAAAGCCACTGGCCTACGTCATCT
CTAAACGTCGTGCACCGAAATCTAAGGCGGCCTATGCCTCCATTGGGGGA
GGGTCGCCCATAGTTAAATATACGGCAGCACAGGCGGAGGGAGTGGAGAA
GGTCCTACGGGAAGACATGGGATTGGACGCCAAGTGTTATGTGGCCATGC
GGTACTGGCATCCATTTACGGATGAAGCCTTGGAGCAAATGCGACAGGAC
GGGGTGAACTCTGTGGTTGTTGTGCCGCTGTACCCCCAGTTTTCGATCTC
GACCAGTGGAAGCTCTCTGCGGGTTTTGCAAGATTTGTTTTTCAAAGACG
CGCCGCGATGGGGTCAAATTTCGCACACTGTCGTCCCGGCGTGGTATGAT
AGGCCAGGTTATGTTCAGGCCATGGGTCGGTTGATTTCTAGGGAGCTGTC
ACAATTCACTGAGGAGCAAAAGGCAGAGGGAAGTCTGCATGTACTGTTCT
CTGCGCATGGCGTGCCGCAACGCTACATTGAGATGGGTGATCCGTACCAG
GAGCAGATCCGGAAATGCGTAGAATTGATTTCGAAGGAGTATGAGGCACC
GGGCGTGACGACGCATTTGTCGTATCAGTCACGGGTGGGGCCCATCGAAT
GGCTGAGACCCTACACCGATGACGTTATCGAAGAGCTGGGCGCGACTGGC
ATTAAGAACTTGGTGGTCGTCCCTATCTCCTTTGTCTCGGAGCATATTGA
GACACTGGAGGAGATCGACATCGAATACCGTGAGCTGGCCCATGAGAATG
GCATCAAGAATTGGAGAAGGGTCCCGGCGCTGAACACGGAGCCAGGTTTT
ATAGAGGATTTGGCGCATATGGTGGTGGAGGCTCTCCAGACACCCTCGAT
TTCAGTGACGGAGGCTTGCGCATTGAATAATTTGGATATTATGCCCATGG
ATGGGCGGACCAACGGGGGACAGGATAGCGACAATAATGGGAAGTTGGCG
GTTTTGGGGTTAGCGGGTGGGGTGGTTTTGGACTTGTGTAGCGGTCGTGG
GGGGTTGGCACATCTCTTGCATTAA
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protein sequence of NO07G01550.1

>NO07G01550.1-protein ID=NO07G01550.1-protein|Name=NO07G01550.1|organism=Nannochloropsis oceanica|type=polypeptide|length=575bp
MVTRLHLCHDQSRRSSSDRSSNKGDSGISGSSSSGPTRTTAAGRAGRVVT
WGSCLVLTGSLLLATSVEGFLFHQPRGGACSGAVRARTCSPSLSSSYSSS
SSMYLHSFAQCTTRRSSLLTVLQSSATAGSSGGSGSDNTNENLSPTRLEA
AVTMDPPTTGMGLRRRLRPKTQLPAPHAGDKPNVKLGVLLLQLGGPERTE
DVEGFLYNLFADPDIIRLPGIISGLQKPLAYVISKRRAPKSKAAYASIGG
GSPIVKYTAAQAEGVEKVLREDMGLDAKCYVAMRYWHPFTDEALEQMRQD
GVNSVVVVPLYPQFSISTSGSSLRVLQDLFFKDAPRWGQISHTVVPAWYD
RPGYVQAMGRLISRELSQFTEEQKAEGSLHVLFSAHGVPQRYIEMGDPYQ
EQIRKCVELISKEYEAPGVTTHLSYQSRVGPIEWLRPYTDDVIEELGATG
IKNLVVVPISFVSEHIETLEEIDIEYRELAHENGIKNWRRVPALNTEPGF
IEDLAHMVVEALQTPSISVTEACALNNLDIMPMDGRTNGGQDSDNNGKLA
VLGLAGGVVLDLCSGRGGLAHLLH*
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mRNA from alignment at chr7:470983..472707-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO07G01550.1 ID=NO07G01550.1|Name=NO07G01550.1|organism=Nannochloropsis oceanica|type=mRNA|length=1725bp|location=Sequence derived from alignment at chr7:470983..472707- (Nannochloropsis oceanica)
ATGGTCACTCGACTGCACCTTTGCCACGACCAGAGCCGCCGCAGCAGCAG
CGACCGCAGCAGTAACAAAGGTGATTCCGGCATTAGCGGGAGCAGCAGCA
GTGGGCCTACAAGAACCACGGCAGCAGGACGCGCAGGCCGCGTTGTGACA
TGGGGCTCCTGTCTCGTTCTAACGGGTAGCTTGTTGCTTGCGACATCTGT
GGAGGGTTTCTTATTTCACCAACCTCGCGGCGGCGCTTGCTCGGGCGCTG
TCCGAGCGCGCACCTGCTCGCCGTCTTTATCGTCCTCCTACTCTTCCTCT
TCGTCAATGTATCTACACTCCTTCGCCCAATGCACAACTAGAAGATCATC
TTTGCTAACAGTTCTACAGAGCAGCGCCACGGCCGGGAGCAGCGGCGGCA
GCGGCAGCGACAACACCAACGAGAATCTCAGTCCCACCCGCCTCGAAGCC
GCGGTCACTATGGACCCTCCCACAACCGGTATGGGCCTGCGACGCCGCCT
CCGCCCGAAAACCCAGCTCCCCGCCCCACACGCCGGCGACAAGCCTAATG
TCAAGCTAGGCGTATTACTTCTCCAACTTGGTGGTCCCGAGCGCACCGAG
GACGTGGAAGGGTTCCTGTACAACTTATTTGCCGACCCGGATATTATTCG
TTTGCCTGGTATTATCAGTGGACTACAAAAGCCACTGGCCTACGTCATCT
CTAAACGTCGTGCACCGAAATCTAAGGCGGCCTATGCCTCCATTGGGGGA
GGGTCGCCCATAGTTAAATATACGGCAGCACAGGCGGAGGGAGTGGAGAA
GGTCCTACGGGAAGACATGGGATTGGACGCCAAGTGTTATGTGGCCATGC
GGTACTGGCATCCATTTACGGATGAAGCCTTGGAGCAAATGCGACAGGAC
GGGGTGAACTCTGTGGTTGTTGTGCCGCTGTACCCCCAGTTTTCGATCTC
GACCAGTGGAAGCTCTCTGCGGGTTTTGCAAGATTTGTTTTTCAAAGACG
CGCCGCGATGGGGTCAAATTTCGCACACTGTCGTCCCGGCGTGGTATGAT
AGGCCAGGTTATGTTCAGGCCATGGGTCGGTTGATTTCTAGGGAGCTGTC
ACAATTCACTGAGGAGCAAAAGGCAGAGGGAAGTCTGCATGTACTGTTCT
CTGCGCATGGCGTGCCGCAACGCTACATTGAGATGGGTGATCCGTACCAG
GAGCAGATCCGGAAATGCGTAGAATTGATTTCGAAGGAGTATGAGGCACC
GGGCGTGACGACGCATTTGTCGTATCAGTCACGGGTGGGGCCCATCGAAT
GGCTGAGACCCTACACCGATGACGTTATCGAAGAGCTGGGCGCGACTGGC
ATTAAGAACTTGGTGGTCGTCCCTATCTCCTTTGTCTCGGAGCATATTGA
GACACTGGAGGAGATCGACATCGAATACCGTGAGCTGGCCCATGAGAATG
GCATCAAGAATTGGAGAAGGGTCCCGGCGCTGAACACGGAGCCAGGTTTT
ATAGAGGATTTGGCGCATATGGTGGTGGAGGCTCTCCAGACACCCTCGAT
TTCAGTGACGGAGGCTTGCGCATTGAATAATTTGGATATTATGCCCATGG
ATGGGCGGACCAACGGGGGACAGGATAGCGACAATAATGGGAAGTTGGCG
GTTTTGGGGTTAGCGGGTGGGGTGGTTTTGGACTTGTGTAGCGGTCGTGG
GGGGTTGGCACATCTCTTGCATTAA
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Coding sequence (CDS) from alignment at chr7:470983..472707-

>NO07G01550.1 ID=NO07G01550.1|Name=NO07G01550.1|organism=Nannochloropsis oceanica|type=CDS|length=1725bp|location=Sequence derived from alignment at chr7:470983..472707- (Nannochloropsis oceanica)
ATGGTCACTCGACTGCACCTTTGCCACGACCAGAGCCGCCGCAGCAGCAG
CGACCGCAGCAGTAACAAAGGTGATTCCGGCATTAGCGGGAGCAGCAGCA
GTGGGCCTACAAGAACCACGGCAGCAGGACGCGCAGGCCGCGTTGTGACA
TGGGGCTCCTGTCTCGTTCTAACGGGTAGCTTGTTGCTTGCGACATCTGT
GGAGGGTTTCTTATTTCACCAACCTCGCGGCGGCGCTTGCTCGGGCGCTG
TCCGAGCGCGCACCTGCTCGCCGTCTTTATCGTCCTCCTACTCTTCCTCT
TCGTCAATGTATCTACACTCCTTCGCCCAATGCACAACTAGAAGATCATC
TTTGCTAACAGTTCTACAGAGCAGCGCCACGGCCGGGAGCAGCGGCGGCA
GCGGCAGCGACAACACCAACGAGAATCTCAGTCCCACCCGCCTCGAAGCC
GCGGTCACTATGGACCCTCCCACAACCGGTATGGGCCTGCGACGCCGCCT
CCGCCCGAAAACCCAGCTCCCCGCCCCACACGCCGGCGACAAGCCTAATG
TCAAGCTAGGCGTATTACTTCTCCAACTTGGTGGTCCCGAGCGCACCGAG
GACGTGGAAGGGTTCCTGTACAACTTATTTGCCGACCCGGATATTATTCG
TTTGCCTGGTATTATCAGTGGACTACAAAAGCCACTGGCCTACGTCATCT
CTAAACGTCGTGCACCGAAATCTAAGGCGGCCTATGCCTCCATTGGGGGA
GGGTCGCCCATAGTTAAATATACGGCAGCACAGGCGGAGGGAGTGGAGAA
GGTCCTACGGGAAGACATGGGATTGGACGCCAAGTGTTATGTGGCCATGC
GGTACTGGCATCCATTTACGGATGAAGCCTTGGAGCAAATGCGACAGGAC
GGGGTGAACTCTGTGGTTGTTGTGCCGCTGTACCCCCAGTTTTCGATCTC
GACCAGTGGAAGCTCTCTGCGGGTTTTGCAAGATTTGTTTTTCAAAGACG
CGCCGCGATGGGGTCAAATTTCGCACACTGTCGTCCCGGCGTGGTATGAT
AGGCCAGGTTATGTTCAGGCCATGGGTCGGTTGATTTCTAGGGAGCTGTC
ACAATTCACTGAGGAGCAAAAGGCAGAGGGAAGTCTGCATGTACTGTTCT
CTGCGCATGGCGTGCCGCAACGCTACATTGAGATGGGTGATCCGTACCAG
GAGCAGATCCGGAAATGCGTAGAATTGATTTCGAAGGAGTATGAGGCACC
GGGCGTGACGACGCATTTGTCGTATCAGTCACGGGTGGGGCCCATCGAAT
GGCTGAGACCCTACACCGATGACGTTATCGAAGAGCTGGGCGCGACTGGC
ATTAAGAACTTGGTGGTCGTCCCTATCTCCTTTGTCTCGGAGCATATTGA
GACACTGGAGGAGATCGACATCGAATACCGTGAGCTGGCCCATGAGAATG
GCATCAAGAATTGGAGAAGGGTCCCGGCGCTGAACACGGAGCCAGGTTTT
ATAGAGGATTTGGCGCATATGGTGGTGGAGGCTCTCCAGACACCCTCGAT
TTCAGTGACGGAGGCTTGCGCATTGAATAATTTGGATATTATGCCCATGG
ATGGGCGGACCAACGGGGGACAGGATAGCGACAATAATGGGAAGTTGGCG
GTTTTGGGGTTAGCGGGTGGGGTGGTTTTGGACTTGTGTAGCGGTCGTGG
GGGGTTGGCACATCTCTTGCATTAA
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Synonyms
Publications