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Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
chr7 | genome | chr7:428704..432430 + |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
BLAST of NO07G01370.1 vs.
Match: EWM27269.1 (UPF0103/Mediator of ErbB2-driven cell motility [Nannochloropsis gaditana]) HSP 1 Score: 465.7 bits (1197), Expect = 1.200e-127 Identity = 228/321 (71.03%), Postives = 269/321 (83.80%), Query Frame = 0
Query: 24 MTKDTYVRQASHSGSWYTKSSETLDSQLTCWLSEASTASLLTPRKGSVRALIAPHAGYSFSGPTAAYAYMHLDPTLIRRIFILGPSHHVHLKACALSGASVCATPVGDLTVDEAVRAELLASPLFQRMTQGIDEDEHSIEMHLPYVAHRIRATQGITIVPVMVGALDPAQEAEYGRIFASYLSDPSNFFIISTDFCHWGRRFAYQPYDSSYGTTIADYIEWLDKQGMGLIEEGDPKAFTTYLRKHQNTICGRHPISVFLQAAKAYREREGGSE--EIRVGFVRYAQSSKCVSRQDSSVSYASAVATTVSANG---GNGGKK 340
M KD Y+R+ASHSGSWYTKS E L QL+ WL EAS+AS TP + V+ALIAPHAGYS+SGPTAA+AYMHLDP++I+R+FILGPSHHV+L+ACA+SGASVC TPVG L+VDEAVRAELLA PLFQ M Q +DEDEHSIEMHLPYVAH + QG++IVP++VG+LDP QEA YGRI A YLSDP+N FI+STDFCHWGRRF YQP+D +YG I +YIEWLD+QGM LIE+GDP+AFTTYLR+++NTICGRHP+ VFLQAA+A REGG E ++RV FVRYAQSS+C+ DSSVSYASAVATT+ A GNGG K
Sbjct: 1 MGKDGYIRKASHSGSWYTKSGEVLRKQLSEWLLEASSASSSTPSQRCVKALIAPHAGYSYSGPTAAHAYMHLDPSVIQRVFILGPSHHVYLRACAVSGASVCETPVGPLSVDEAVRAELLADPLFQTMAQRVDEDEHSIEMHLPYVAHLVGEVQGVSIVPILVGSLDPTQEAVYGRILAKYLSDPANLFIVSTDFCHWGRRFQYQPFDRAYGEDIHEYIEWLDRQGMALIEQGDPQAFTTYLRQYRNTICGRHPLGVFLQAAQAL--REGGKEGLDVRVEFVRYAQSSRCMHETDSSVSYASAVATTLMAGNDARGNGGAK 319
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO07G01370.1 ID=NO07G01370.1|Name=NO07G01370.1|organism=Nannochloropsis oceanica|type=mRNA|length=3574bp ACTGGCATTCTCCAAGTCTATTCGTCGTATCTTTGGTTCTGTCGCCCACG CTTCTCAATAGTGAAGAAATGTTCCTGTTTCTTCACACCGACTCTTCACC TCCCTTACAACATCTTACCCACCCATCCCTTCACTGTCTCCTTCAACTTC GACGACCGCTGCCGCTTCTCCTCCTCTATCACCTCCTTGTCAAGCGTCTT GAATGCACACACCAAGACAATCACCGCCGGCGGCAACAGTTTCTCTATCC TCGTCGCCGCTACGCTCCTCCCGCCATTCCTCCCCGGCGCTGTCGGGTCG GCTCGCTCTATGTACCAACTCCCCACATCGTGATCCTGACTCCGAGGGGG AAACCGCCAATATTCTGAAGGAATATAGGACTGTAGGTCGCCTTTGGTAA CTCGACATTCCACCCCTCCCTCCGCTTGGAGCAGGTGCAAGTGAGAGACT AGAGGGGTTCGGTGCGAGACGAGGACGTGGGTCAAGCCTCCAGTGGCGGC ATCGCGGACTTGATGACTGGAAAGTAGCCGCTTCGATTCCAGGCCTCGAA TGACATAGCACTTTCCTCGTTGCTCTTGTTGCTGGTGCTGGTGCTGGTGC TGCACCTCTCCTTCCAGGTACGTCTGAACTACCACCACATCCTCTCCTTC GACCGGATCCCGCAGACGTGTGCTTCGCGCCAAGCACCGTCCTTGCCACA CGAGCCTCAAGGGCATGTAATTCTTTCTATCAGTCGCTGAAATCAAGCCA CTTAGCTGCGACCGCAACGACAGCCCTTCCTCTTCCTCCACTCCCTGCTT TTCTTTCTCTCCCTCCTTCTTCCCCTCTCTTCCCGCCTCTAACAAACTGT CTATAGAAAGCGGCGCAGCGTCAACAAAACCCAACAACTGTTGCCCACTA GTCATCTCTAATATGTGCGGATGTAAACTTTCCTGTCCCTCCTTCCCTAT CTCCGCCCCTCTCTCCTCTGTTACTCTCCCACGCGACCGTCTCTCCTCGC CTTCAAAGGCCCAAGGGATTGTGTTCTCCGCGACCCTCGGCCCGAGGTAA GAGTAAATTAATGCATCGTGAAAAGATTCCTGCAGCTGACCAAACAACCC CGGGTCCGACAGAGTCAAGGCATCCCATGGTTTGGCCCCTCTCGCGGCAG CATGGGCAATTCCTGCTCTTCTTCTTCCTTCCTCGTTCTCATCCTCGCAA TCGTGTTCACCCTCATGAATAGCATTGTACATCCCTGCCCGGCGCCGGGC GCTGCGACGACGGCCCTTGCGAAGAGAGGCGTTGAAGGCATCCACAGGAT TAGGATCTCGGCTGCTCTGGTCGGAGAAACCTGCTACTGCCGCCGCTGCT GCTGCTGCTGCTGCTGATGCTGAGGTCCCATTGCGGGAGTAATGTCGACG CTTAAGGATGTACTCTGCGCGCTTGGTTGGGTCCATCAAGGTCTCATAGG CACGCATCTATGAGTATGGGAAGAAAACAGACGCCCGACAAAATTATTCA CCACGAAAACACAAATATGCAAAGCCAGGCATGCCTACCGTCTGTCACTT ACAAGCTTATGGAAGTCCGCGGCTGCTTTCAAAGCATCCGTTCGGTGGGT TTGGGCAGCCGCGTCCGGATGCACCTGCTTGGCCAACTGATAAAAGCTGG TCTTGATTTCCGCTTCCGTGGCATCAACCTTTACGTTTAGAATGACGAAG GGGTCTTCCGTCTCGGGCAGGGGTGGTTGCTCATCGCGCCGACCCCGCTG CCTTTCGTCCTCCGACCGGGAGGCGGACGAGGATAATAGAGCGCGTTTCC GTACACCTTGGGCGCCCCCACTGCTGGCTGCAACGACACGCCGAGACAAC AAGGCCGACTTATAAAAGAGCATCGGATGCGTGTATTAAGGTGATAGGGA GTGGCAAGAGTGGACACGCCGGGCACACGCCAGATGGACGATAGGCCAGG TCCGAGGATGCTGTTGATCGGAAATCACAATAGTGGTCGTCTCTGCCTCT TTAAAGTCTACAAGCGCTGGTCTGTCACAGCACTACCGCCCTCCCCTCGC TCGCGGGCCTAGCCTATTATGTGAGTGCTTTGGGGATGGGTTCGGCTGCT GGGGTGGCAAAAGTGCACGTGCGGCGTTAATTGGCGATGGTTGGGGGGAG GAGGTCGCAATGGCAAGTCCTTGTCAACAAGCAGCACAGCCCACCTCCCC GCACACAGGCACAAGCACAGTGAGGGAGATGACGAAGGACACCTATGTCC GCCAAGCCAGCCACAGCGGCAGTTGGTACACCAAGTCAAGCGAGACCTTG GACTCGCAGCTGACGTGCTGGCTAAGTGAAGCAAGTACTGCCTCGTTGTT AACGCCAAGGAAAGGGAGCGTCCGGGCGCTCATTGCCCCACACGCAGGCT ACAGTTTCTCGGGCCCGACGGCGGCGTACGCGTACATGCACTTGGACCCT ACTTTGATCCGCCGCATCTTTATCTTAGGGCCCTCCCACCACGTCCACCT CAAAGCTTGTGCTCTCTCGGGCGCCTCTGTGTGCGCTACCCCTGTAGGCG ACCTTACAGTGGACGAGGCTGTTCGAGCCGAGTTGCTGGCGAGTCCTCTG TTTCAACGCATGACCCAGGGAATAGATGAGGACGAGCATTCGATCGAGAT GCATTTGCCGTACGTGGCCCATAGGATCAGAGCAACGCAGGGTATTACCA TTGTGCCGGTAATGGTGGGTGCATTGGACCCTGCGCAGGAGGCGGAGTAC GGACGCATCTTCGCGTCCTACCTCTCCGATCCCTCCAACTTCTTCATCAT CAGCACCGACTTCTGCCACTGGGGCCGTCGCTTCGCCTACCAACCGTACG ACTCATCCTACGGCACCACCATCGCTGACTACATCGAGTGGCTGGATAAG CAGGGCATGGGCTTGATAGAGGAGGGCGACCCAAAGGCCTTTACCACGTA CCTCCGCAAGCACCAAAATACCATCTGTGGTCGTCATCCAATCAGTGTTT TCTTGCAGGCGGCCAAAGCATACAGGGAGAGAGAGGGAGGGAGCGAGGAG ATACGGGTCGGCTTCGTGAGGTATGCGCAGAGTAGTAAATGTGTGAGTCG GCAGGATTCGTCTGTGAGCTACGCGAGTGCTGTGGCCACGACAGTATCGG CGAATGGGGGAAATGGAGGGAAGAAGGGGTAGAGGGAGGGAGAGAGGGAG GAAAGGAGGGAGGGAGAGGAGAGGGATACTTAGAGGATACCGAAGAAGGG AGAAGACAGGGGACCGAGAGGACGGAGGGAAGGAGGGAGGTAAGGAGAAG GGGAGTCGGGGAAGGAAGGATAAAGAAGAGGGGGTTGTGTAGTGAGAATG TACGCAGGAGCCGGAAGGGACGGAAGGATGGAGGGGAAACGAAGGGAGAT GAGAGGAGAGAGTTTAGGAAGTGGTGCATGTGAATGAGAGCGAGCAGGAG CAGTGTGTACAGAGAGAAATGGAAGACAGATACTTGAAGACGACCTTGGC CCCTCATGCTCCCCTGTCTCCCCCCCCTTTCCTTCCCCATCCTCTTTCGC TTTGTGAATGATTGTGTGTGTGTG back to topprotein sequence of NO07G01370.1 >NO07G01370.1-protein ID=NO07G01370.1-protein|Name=NO07G01370.1|organism=Nannochloropsis oceanica|type=polypeptide|length=341bp MASPCQQAAQPTSPHTGTSTVREMTKDTYVRQASHSGSWYTKSSETLDSQ LTCWLSEASTASLLTPRKGSVRALIAPHAGYSFSGPTAAYAYMHLDPTLI RRIFILGPSHHVHLKACALSGASVCATPVGDLTVDEAVRAELLASPLFQR MTQGIDEDEHSIEMHLPYVAHRIRATQGITIVPVMVGALDPAQEAEYGRI FASYLSDPSNFFIISTDFCHWGRRFAYQPYDSSYGTTIADYIEWLDKQGM GLIEEGDPKAFTTYLRKHQNTICGRHPISVFLQAAKAYREREGGSEEIRV GFVRYAQSSKCVSRQDSSVSYASAVATTVSANGGNGGKKG* back to topmRNA from alignment at chr7:428704..432430+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO07G01370.1 ID=NO07G01370.1|Name=NO07G01370.1|organism=Nannochloropsis oceanica|type=mRNA|length=3727bp|location=Sequence derived from alignment at chr7:428704..432430+ (Nannochloropsis oceanica) ACTGGCATTCTCCAAGTCTATTCGTCGTATCTTTGGTTCTGTCGCCCACG
CTTCTCAATAGTGAAGAAATGTTCCTGTTTCTTCACACCGACTCTTCACC
TCCCTTACAACATCTTACCCACCCATCCCTTCACTGTCTCCTTCAACTTC
GACGACCGCTGCCGCTTCTCCTCCTCTATCACCTCCTTGTCAAGCGTCTT
GAATGCACACACCAAGACAATCACCGCCGGCGGCAACAGTTTCTCTATCC
TCGTCGCCGCTACGCTCCTCCCGCCATTCCTCCCCGGCGCTGTCGGGTCG
GCTCGCTCTATGTACCAACTCCCCACATCGTGATCCTGACTCCGAGGGGG
AAACCGCCAATATTCTGAAGGAATATAGGACTGTAGGTCGCCTTTGGTAA
CTCGACATTCCACCCCTCCCTCCGCTTGGAGCAGGTGCAAGTGAGAGACT
AGAGGGGTTCGGTGCGAGACGAGGACGTGGGTCAAGCCTCCAGTGGCGGC
ATCGCGGACTTGATGACTGGAAAGTAGCCGCTTCGATTCCAGGCCTCGAA
TGACATAGCACTTTCCTCGTTGCTCTTGTTGCTGGTGCTGGTGCTGGTGC
TGCACCTCTCCTTCCAGGTACGTCTGAACTACCACCACATCCTCTCCTTC
GACCGGATCCCGCAGACGTGTGCTTCGCGCCAAGCACCGTCCTTGCCACA
CGAGCCTCAAGGGCATGTAATTCTTTCTATCAGTCGCTGAAATCAAGCCA
CTTAGCTGCGACCGCAACGACAGCCCTTCCTCTTCCTCCACTCCCTGCTT
TTCTTTCTCTCCCTCCTTCTTCCCCTCTCTTCCCGCCTCTAACAAACTGT
CTATAGAAAGCGGCGCAGCGTCAACAAAACCCAACAACTGTTGCCCACTA
GTCATCTCTAATATGTGCGGATGTAAACTTTCCTGTCCCTCCTTCCCTAT
CTCCGCCCCTCTCTCCTCTGTTACTCTCCCACGCGACCGTCTCTCCTCGC
CTTCAAAGGCCCAAGGGATTGTGTTCTCCGCGACCCTCGGCCCGAGGTAA
GAGTAAATTAATGCATCGTGAAAAGATTCCTGCAGCTGACCAAACAACCC
CGGGTCCGACAGAGTCAAGGCATCCCATGGTTTGGCCCCTCTCGCGGCAG
CATGGGCAATTCCTGCTCTTCTTCTTCCTTCCTCGTTCTCATCCTCGCAA
TCGTGTTCACCCTCATGAATAGCATTGTACATCCCTGCCCGGCGCCGGGC
GCTGCGACGACGGCCCTTGCGAAGAGAGGCGTTGAAGGCATCCACAGGAT
TAGGATCTCGGCTGCTCTGGTCGGAGAAACCTGCTACTGCCGCCGCTGCT
GCTGCTGCTGCTGCTGATGCTGAGGTCCCATTGCGGGAGTAATGTCGACG
CTTAAGGATGTACTCTGCGCGCTTGGTTGGGTCCATCAAGGTCTCATAGG
CACGCATCTATGAGTATGGGAAGAAAACAGACGCCCGACAAAATTATTCA
CCACGAAAACACAAATATGCAAAGCCAGGCATGCCTACCGTCTGTCACTT
ACAAGCTTATGGAAGTCCGCGGCTGCTTTCAAAGCATCCGTTCGGTGGGT
TTGGGCAGCCGCGTCCGGATGCACCTGCTTGGCCAACTGATAAAAGCTGG
TCTTGATTTCCGCTTCCGTGGCATCAACCTTTACGTTTAGAATGACGAAG
GGGTCTTCCGTCTCGGGCAGGGGTGGTTGCTCATCGCGCCGACCCCGCTG
CCTTTCGTCCTCCGACCGGGAGGCGGACGAGGATAATAGAGCGCGTTTCC
GTACACCTTGGGCGCCCCCACTGCTGGCTGCAACGACACGCCGAGACAAC
AAGGCCGACTTATAAAAGAGCATCGGATGCGTGTATTAAGGTGATAGGGA
GTGGCAAGAGTGGACACGCCGGGCACACGCCAGATGGACGATAGGCCAGG
TCCGAGGATGCTGTTGATCGGAAATCACAATAGTGGTCGTCTCTGCCTCT
TTAAAGTCTACAAGCGCTGGTCTGTCACAGCACTACCGCCCTCCCCTCGC
TCGCGGGCCTAGCCTATTATGTGAGTGCTTTGGGGATGGGTTCGGCTGCT
GGGGTGGCAAAAGTGCACGTGCGGCGTTAATTGGCGATGGTTGGGGGGAG
GAGGTCGCAATGGCAAGTCCTTGTCAACAAGCAGCACAGCCCACCTCCCC
GCACACAGGCACAAGCACAGTGAGGGAGATGACGAAGGACACCTATGTCC
GCCAAGCCAGCCACAGCGGCAGTTGGTACACCAAGTCAAGCGAGACCTTG
GACTCGCAGCTGACGTGCTGGCTAAGTGAAGCAAGTACTGCCTCGTTGTT
AACGCCAAGGAAAGGGAGCGTCCGGGCGCTCATTGCCCCACACGCAGGCT
ACAGTTTCTCGGGCCCGACGGCGGCGTACGCGTACATGCACTTGGACCCT
ACTTTGATCCGCCGCATCTTTATCTTAGGGCCCTCCCACCACGTCCACCT
CAAAGCTTGTGCTCTCTCGGGCGCCTCTGTGTGCGCTACCCCTGTAGGCG
ACCTTACAGTGGACGAGGCTGTTCGAGCCGAGTTGCTGGCGAGTCCTCTG
TTTCAACGCATGACCCAGGGAATAGATGAGGACGAGCATTCGATCGAGAT
GCATTTGCCGTACGTGGCCCATAGGATCAGAGCAACGCAGGGTATTACCA
TTGTGCCGGTAATGGTGGGTGCATTGGACCCTGCGCAGGAGGCGGAGTAC
GGACGGTACGTGTGTTACTATGCCCGAAAATCTAGAGGATATCTGTTGCG
ATAGAAAGGGCGTCATTCACCCTCCTTCCCTTACTCCCCTCCCTCTCCCG
TCACTCATCCACTCACCTACCCTCCCTCACTCCCGTTCTCCTCTCCTCCC
ACCCATAGCATCTTCGCGTCCTACCTCTCCGATCCCTCCAACTTCTTCAT
CATCAGCACCGACTTCTGCCACTGGGGCCGTCGCTTCGCCTACCAACCGT
ACGACTCATCCTACGGCACCACCATCGCTGACTACATCGAGTGGCTGGAT
AAGCAGGGCATGGGCTTGATAGAGGAGGGCGACCCAAAGGCCTTTACCAC
GTACCTCCGCAAGCACCAAAATACCATCTGTGGTCGTCATCCAATCAGTG
TTTTCTTGCAGGCGGCCAAAGCATACAGGGAGAGAGAGGGAGGGAGCGAG
GAGATACGGGTCGGCTTCGTGAGGTATGCGCAGAGTAGTAAATGTGTGAG
TCGGCAGGATTCGTCTGTGAGCTACGCGAGTGCTGTGGCCACGACAGTAT
CGGCGAATGGGGGAAATGGAGGGAAGAAGGGGTAGAGGGAGGGAGAGAGG
GAGGAAAGGAGGGAGGGAGAGGAGAGGGATACTTAGAGGATACCGAAGAA
GGGAGAAGACAGGGGACCGAGAGGACGGAGGGAAGGAGGGAGGTAAGGAG
AAGGGGAGTCGGGGAAGGAAGGATAAAGAAGAGGGGGTTGTGTAGTGAGA
ATGTACGCAGGAGCCGGAAGGGACGGAAGGATGGAGGGGAAACGAAGGGA
GATGAGAGGAGAGAGTTTAGGAAGTGGTGCATGTGAATGAGAGCGAGCAG
GAGCAGTGTGTACAGAGAGAAATGGAAGACAGATACTTGAAGACGACCTT
GGCCCCTCATGCTCCCCTGTCTCCCCCCCCTTTCCTTCCCCATCCTCTTT
CGCTTTGTGAATGATTGTGTGTGTGTG back to topCoding sequence (CDS) from alignment at chr7:428704..432430+ >NO07G01370.1 ID=NO07G01370.1|Name=NO07G01370.1|organism=Nannochloropsis oceanica|type=CDS|length=1023bp|location=Sequence derived from alignment at chr7:428704..432430+ (Nannochloropsis oceanica) ATGGCAAGTCCTTGTCAACAAGCAGCACAGCCCACCTCCCCGCACACAGG CACAAGCACAGTGAGGGAGATGACGAAGGACACCTATGTCCGCCAAGCCA GCCACAGCGGCAGTTGGTACACCAAGTCAAGCGAGACCTTGGACTCGCAG CTGACGTGCTGGCTAAGTGAAGCAAGTACTGCCTCGTTGTTAACGCCAAG GAAAGGGAGCGTCCGGGCGCTCATTGCCCCACACGCAGGCTACAGTTTCT CGGGCCCGACGGCGGCGTACGCGTACATGCACTTGGACCCTACTTTGATC CGCCGCATCTTTATCTTAGGGCCCTCCCACCACGTCCACCTCAAAGCTTG TGCTCTCTCGGGCGCCTCTGTGTGCGCTACCCCTGTAGGCGACCTTACAG TGGACGAGGCTGTTCGAGCCGAGTTGCTGGCGAGTCCTCTGTTTCAACGC ATGACCCAGGGAATAGATGAGGACGAGCATTCGATCGAGATGCATTTGCC GTACGTGGCCCATAGGATCAGAGCAACGCAGGGTATTACCATTGTGCCGG TAATGGTGGGTGCATTGGACCCTGCGCAGGAGGCGGAGTACGGACGCATC TTCGCGTCCTACCTCTCCGATCCCTCCAACTTCTTCATCATCAGCACCGA CTTCTGCCACTGGGGCCGTCGCTTCGCCTACCAACCGTACGACTCATCCT ACGGCACCACCATCGCTGACTACATCGAGTGGCTGGATAAGCAGGGCATG GGCTTGATAGAGGAGGGCGACCCAAAGGCCTTTACCACGTACCTCCGCAA GCACCAAAATACCATCTGTGGTCGTCATCCAATCAGTGTTTTCTTGCAGG CGGCCAAAGCATACAGGGAGAGAGAGGGAGGGAGCGAGGAGATACGGGTC GGCTTCGTGAGGTATGCGCAGAGTAGTAAATGTGTGAGTCGGCAGGATTC GTCTGTGAGCTACGCGAGTGCTGTGGCCACGACAGTATCGGCGAATGGGG GAAATGGAGGGAAGAAGGGGTAG back to top
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