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Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
chr7 | genome | chr7:375360..377091 - |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
BLAST of NO07G01150.1 vs.
Match: EWM27257.1 (udp-sulfoquinovose synthase [Nannochloropsis gaditana]) HSP 1 Score: 819.7 bits (2116), Expect = 4.600e-234 Identity = 404/467 (86.51%), Postives = 428/467 (91.65%), Query Frame = 0
Query: 1 MFRLFVLPLLLLAGAHAFN--PSVGKAGLSRLPPVGGRQVRAESSLLRPVTARASQTITMMAAVGNPKKIVVLGGDGFCGWPTALYLSEKGHDVIIVDNLSRRNIDNELGCVSLTPISSMETRIAAWEQVSGRRMKFVNLDVAKDYHEMVKLFLDEKPDTVVHFAEQRAAPYSQKGAKQKRYTVDNNVSGTNNLLVAVVESGLDIHIVHLGTMGVYGYGTSGGEIPEGYIDVILPGGRPSSILHPAYPGSVYHTTKCLDALLFQFYNKNDGVKVTDLHQGIVWGTNTPQTIKDERLINRFDYDGDYGTVLNRFIIQGALGVPLTVYGTGGQTRGFIHITDTARCIEIAVSNPPKTGDKVQIFNQIAETLRVGDLAKLVGEKTGVSINYLKNPRLESAENELEVANRKFRGLGLDPILLDSNLGLVDEVRTIASKYADRCVREKILPASFWNKKRAAECEVNTLEGNK 466
M RL +L LLL+A AHAF+ S+ K G SR+ RQ RAESS L T+R S T+TMMAA PKKIVVLGGDGFCGWPT+LYLSEKGHDVIIVDNLSRRNIDNELGC SLTPI S ETR+ AWE+VSGR M+FVNLDVA+DY E+V+LFL EKPD VVHFAEQRAAPYSQKGAKQKRYTVDNNVSGTNNLLVAVVESGLDIH+VHLGTMGVYGYGTSGGEIPEGYIDVILPGGRPSSILHPAYPGSVYHTTKCLDALLFQFYNKNDG++VTDLHQGIVWGTNTPQTIKDERLINRFDYDGDYGTVLNRFI+QGALGVPLTVYGTGGQTRGFIHITDTARCIEIAVSNPP+ G+KVQIFNQIAETLRVGDLAKLV EKTGV INYLKNPRLESAENELEVANRKFRGLGLDPILLDSNLGLVDEV+TIA+KYADRCVREKILPASFWN++R AECE NTLEG K
Sbjct: 1 MARLLLLSLLLIASAHAFHFHSSLCKTGASRMSSFRARQQRAESSSLMLATSRRSHTMTMMAAGSKPKKIVVLGGDGFCGWPTSLYLSEKGHDVIIVDNLSRRNIDNELGCSSLTPIESPETRVKAWEKVSGRTMRFVNLDVARDYQELVQLFLAEKPDAVVHFAEQRAAPYSQKGAKQKRYTVDNNVSGTNNLLVAVVESGLDIHVVHLGTMGVYGYGTSGGEIPEGYIDVILPGGRPSSILHPAYPGSVYHTTKCLDALLFQFYNKNDGIRVTDLHQGIVWGTNTPQTIKDERLINRFDYDGDYGTVLNRFIMQGALGVPLTVYGTGGQTRGFIHITDTARCIEIAVSNPPQAGEKVQIFNQIAETLRVGDLAKLVAEKTGVDINYLKNPRLESAENELEVANRKFRGLGLDPILLDSNLGLVDEVKTIAAKYADRCVREKILPASFWNRRREAECEANTLEGGK 467
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO07G01150.1 ID=NO07G01150.1|Name=NO07G01150.1|organism=Nannochloropsis oceanica|type=mRNA|length=1398bp ATGTTCCGATTGTTTGTGCTACCCTTACTGCTGCTGGCGGGCGCACATGC CTTCAACCCGTCGGTGGGTAAGGCGGGGCTATCCCGCCTGCCTCCGGTCG GAGGACGTCAGGTGCGCGCTGAATCTTCTCTTTTGAGACCTGTCACTGCC CGGGCAAGTCAAACCATAACCATGATGGCAGCAGTGGGGAATCCCAAGAA GATTGTGGTACTAGGCGGCGACGGCTTCTGCGGCTGGCCCACCGCCCTCT ATCTCTCGGAGAAAGGCCATGACGTCATCATCGTCGACAACCTCTCCCGG CGAAATATCGACAACGAACTCGGCTGCGTCTCCCTGACCCCCATCTCAAG CATGGAGACCCGCATCGCTGCCTGGGAACAAGTCAGTGGCAGACGCATGA AATTTGTCAACCTCGATGTAGCGAAGGATTACCACGAGATGGTCAAGCTC TTCCTCGACGAAAAACCCGACACCGTCGTCCATTTTGCCGAGCAACGGGC CGCACCCTACTCCCAGAAGGGGGCGAAGCAAAAGAGGTACACCGTCGATA ACAACGTCTCGGGTACCAATAACCTGCTAGTGGCAGTGGTGGAGAGCGGC CTCGACATCCACATCGTCCATCTCGGCACCATGGGGGTCTACGGATACGG GACCAGCGGGGGCGAGATCCCAGAGGGCTATATCGACGTCATCCTCCCTG GTGGCCGACCCTCGTCGATCCTCCACCCAGCTTACCCCGGCTCAGTCTAT CACACCACCAAGTGCTTGGATGCCTTGTTGTTCCAATTTTATAATAAAAA CGACGGCGTTAAGGTCACGGACTTACACCAGGGCATCGTGTGGGGCACCA ACACGCCTCAAACCATCAAGGACGAAAGGTTGATCAATCGCTTTGATTAC GATGGGGACTACGGCACAGTGTTGAACCGCTTCATCATTCAAGGCGCTCT GGGCGTGCCCTTGACAGTGTATGGCACGGGGGGCCAAACGCGCGGGTTTA TCCACATTACCGACACTGCCCGTTGCATCGAAATTGCCGTTTCCAACCCT CCGAAAACCGGTGACAAAGTTCAAATTTTCAATCAAATTGCCGAAACCTT GCGAGTGGGTGATTTGGCGAAGCTGGTGGGAGAAAAGACGGGCGTGAGCA TCAACTATCTCAAGAACCCACGATTAGAAAGCGCGGAAAACGAGCTGGAG GTCGCGAATAGGAAATTCCGTGGCTTGGGTTTAGACCCGATATTGTTGGA TTCGAATTTGGGATTAGTGGATGAGGTGAGAACAATTGCGTCTAAGTACG CGGATCGATGTGTGCGGGAGAAGATCCTGCCGGCCAGCTTTTGGAATAAG AAGAGGGCGGCGGAGTGTGAAGTGAACACATTGGAGGGGAACAAGTAG back to topprotein sequence of NO07G01150.1 >NO07G01150.1-protein ID=NO07G01150.1-protein|Name=NO07G01150.1|organism=Nannochloropsis oceanica|type=polypeptide|length=466bp MFRLFVLPLLLLAGAHAFNPSVGKAGLSRLPPVGGRQVRAESSLLRPVTA RASQTITMMAAVGNPKKIVVLGGDGFCGWPTALYLSEKGHDVIIVDNLSR RNIDNELGCVSLTPISSMETRIAAWEQVSGRRMKFVNLDVAKDYHEMVKL FLDEKPDTVVHFAEQRAAPYSQKGAKQKRYTVDNNVSGTNNLLVAVVESG LDIHIVHLGTMGVYGYGTSGGEIPEGYIDVILPGGRPSSILHPAYPGSVY HTTKCLDALLFQFYNKNDGVKVTDLHQGIVWGTNTPQTIKDERLINRFDY DGDYGTVLNRFIIQGALGVPLTVYGTGGQTRGFIHITDTARCIEIAVSNP PKTGDKVQIFNQIAETLRVGDLAKLVGEKTGVSINYLKNPRLESAENELE VANRKFRGLGLDPILLDSNLGLVDEVRTIASKYADRCVREKILPASFWNK KRAAECEVNTLEGNK* back to topmRNA from alignment at chr7:375360..377091- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO07G01150.1 ID=NO07G01150.1|Name=NO07G01150.1|organism=Nannochloropsis oceanica|type=mRNA|length=1732bp|location=Sequence derived from alignment at chr7:375360..377091- (Nannochloropsis oceanica) ATGTTCCGATTGTTTGTGCTACCCTTACTGCTGCTGGCGGGCGCACATGC
CTTCAACCCGTCGGTGGGTAAGGCGGGGCTATCCCGCCTGCCTCCGGTCG
GAGGACGTCAGGTGCGCGCTGAATCTTCTCTTTTGAGACCTGTCACTGCC
CGGGCAAGTCAAACCATAACCATGATGGCAGCAGTGGGGAATCCCAAGAA
GATTGTGGTACTAGGTACGTAGTTGGTTGGGTGCATGGGAGAGGGGAGGA
GGGGGGAGGTGGACAAACGGACGGTGGGGAGGCTCGCCGGGTCGCTTATT
TTAAGCGGGATCGAAAGTGGCGACCGTTGCGTTGTAATGAGGCGAGGTTG
CGAAGATCAAGTATGTGTGACTTTATCGTCATTGACGCAGAATTGATTTG
TGAAGATGGAGTAGGAGAGATGGGGGGGGAAAGGAGGCGGCATAAATAAA
GTGCCATACTGTCGTTATAATCGTCATACAGTAACCACATCAACCCTTCA
TTTACTCCATCCCTTCCCTCCCTCCTTCATCCTCACCTTTCCCCGCAGGC
GGCGACGGCTTCTGCGGCTGGCCCACCGCCCTCTATCTCTCGGAGAAAGG
CCATGACGTCATCATCGTCGACAACCTCTCCCGGCGAAATATCGACAACG
AACTCGGCTGCGTCTCCCTGACCCCCATCTCAAGCATGGAGACCCGCATC
GCTGCCTGGGAACAAGTCAGTGGCAGACGCATGAAATTTGTCAACCTCGA
TGTAGCGAAGGATTACCACGAGATGGTCAAGCTCTTCCTCGACGAAAAAC
CCGACACCGTCGTCCATTTTGCCGAGCAACGGGCCGCACCCTACTCCCAG
AAGGGGGCGAAGCAAAAGAGGTACACCGTCGATAACAACGTCTCGGGTAC
CAATAACCTGCTAGTGGCAGTGGTGGAGAGCGGCCTCGACATCCACATCG
TCCATCTCGGCACCATGGGGGTCTACGGATACGGGACCAGCGGGGGCGAG
ATCCCAGAGGGCTATATCGACGTCATCCTCCCTGGTGGCCGACCCTCGTC
GATCCTCCACCCAGCTTACCCCGGCTCAGTCTATCACACCACCAAGTGCT
TGGATGCCTTGTTGTTCCAATTTTATAATAAAAACGACGGCGTTAAGGTC
ACGGACTTACACCAGGGCATCGTGTGGGGCACCAACACGCCTCAAACCAT
CAAGGACGAAAGGTTGATCAATCGCTTTGATTACGATGGGGACTACGGCA
CAGTGTTGAACCGCTTCATCATTCAAGGCGCTCTGGGCGTGCCCTTGACA
GTGTATGGCACGGGGGGCCAAACGCGCGGGTTTATCCACATTACCGACAC
TGCCCGTTGCATCGAAATTGCCGTTTCCAACCCTCCGAAAACCGGTGACA
AAGTTCAAATTTTCAATCAAATTGCCGAAACCTTGCGAGTGGGTGATTTG
GCGAAGCTGGTGGGAGAAAAGACGGGCGTGAGCATCAACTATCTCAAGAA
CCCACGATTAGAAAGCGCGGAAAACGAGCTGGAGGTCGCGAATAGGAAAT
TCCGTGGCTTGGGTTTAGACCCGATATTGTTGGATTCGAATTTGGGATTA
GTGGATGAGGTGAGAACAATTGCGTCTAAGTACGCGGATCGATGTGTGCG
GGAGAAGATCCTGCCGGCCAGCTTTTGGAATAAGAAGAGGGCGGCGGAGT
GTGAAGTGAACACATTGGAGGGGAACAAGTAG back to topCoding sequence (CDS) from alignment at chr7:375360..377091- >NO07G01150.1 ID=NO07G01150.1|Name=NO07G01150.1|organism=Nannochloropsis oceanica|type=CDS|length=1398bp|location=Sequence derived from alignment at chr7:375360..377091- (Nannochloropsis oceanica) ATGTTCCGATTGTTTGTGCTACCCTTACTGCTGCTGGCGGGCGCACATGC CTTCAACCCGTCGGTGGGTAAGGCGGGGCTATCCCGCCTGCCTCCGGTCG GAGGACGTCAGGTGCGCGCTGAATCTTCTCTTTTGAGACCTGTCACTGCC CGGGCAAGTCAAACCATAACCATGATGGCAGCAGTGGGGAATCCCAAGAA GATTGTGGTACTAGGCGGCGACGGCTTCTGCGGCTGGCCCACCGCCCTCT ATCTCTCGGAGAAAGGCCATGACGTCATCATCGTCGACAACCTCTCCCGG CGAAATATCGACAACGAACTCGGCTGCGTCTCCCTGACCCCCATCTCAAG CATGGAGACCCGCATCGCTGCCTGGGAACAAGTCAGTGGCAGACGCATGA AATTTGTCAACCTCGATGTAGCGAAGGATTACCACGAGATGGTCAAGCTC TTCCTCGACGAAAAACCCGACACCGTCGTCCATTTTGCCGAGCAACGGGC CGCACCCTACTCCCAGAAGGGGGCGAAGCAAAAGAGGTACACCGTCGATA ACAACGTCTCGGGTACCAATAACCTGCTAGTGGCAGTGGTGGAGAGCGGC CTCGACATCCACATCGTCCATCTCGGCACCATGGGGGTCTACGGATACGG GACCAGCGGGGGCGAGATCCCAGAGGGCTATATCGACGTCATCCTCCCTG GTGGCCGACCCTCGTCGATCCTCCACCCAGCTTACCCCGGCTCAGTCTAT CACACCACCAAGTGCTTGGATGCCTTGTTGTTCCAATTTTATAATAAAAA CGACGGCGTTAAGGTCACGGACTTACACCAGGGCATCGTGTGGGGCACCA ACACGCCTCAAACCATCAAGGACGAAAGGTTGATCAATCGCTTTGATTAC GATGGGGACTACGGCACAGTGTTGAACCGCTTCATCATTCAAGGCGCTCT GGGCGTGCCCTTGACAGTGTATGGCACGGGGGGCCAAACGCGCGGGTTTA TCCACATTACCGACACTGCCCGTTGCATCGAAATTGCCGTTTCCAACCCT CCGAAAACCGGTGACAAAGTTCAAATTTTCAATCAAATTGCCGAAACCTT GCGAGTGGGTGATTTGGCGAAGCTGGTGGGAGAAAAGACGGGCGTGAGCA TCAACTATCTCAAGAACCCACGATTAGAAAGCGCGGAAAACGAGCTGGAG GTCGCGAATAGGAAATTCCGTGGCTTGGGTTTAGACCCGATATTGTTGGA TTCGAATTTGGGATTAGTGGATGAGGTGAGAACAATTGCGTCTAAGTACG CGGATCGATGTGTGCGGGAGAAGATCCTGCCGGCCAGCTTTTGGAATAAG AAGAGGGCGGCGGAGTGTGAAGTGAACACATTGGAGGGGAACAAGTAG back to top
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