NO07G01150.1, NO07G01150.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO07G01150.1
Unique NameNO07G01150.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1398
Alignment locationchr7:375360..377091 -

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Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr7genomechr7:375360..377091 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
BLAST of NO07G01150.1 vs.
Match: EWM27257.1 (udp-sulfoquinovose synthase [Nannochloropsis gaditana])

HSP 1 Score: 819.7 bits (2116), Expect = 4.600e-234
Identity = 404/467 (86.51%), Postives = 428/467 (91.65%), Query Frame = 0
Query:    1 MFRLFVLPLLLLAGAHAFN--PSVGKAGLSRLPPVGGRQVRAESSLLRPVTARASQTITMMAAVGNPKKIVVLGGDGFCGWPTALYLSEKGHDVIIVDNLSRRNIDNELGCVSLTPISSMETRIAAWEQVSGRRMKFVNLDVAKDYHEMVKLFLDEKPDTVVHFAEQRAAPYSQKGAKQKRYTVDNNVSGTNNLLVAVVESGLDIHIVHLGTMGVYGYGTSGGEIPEGYIDVILPGGRPSSILHPAYPGSVYHTTKCLDALLFQFYNKNDGVKVTDLHQGIVWGTNTPQTIKDERLINRFDYDGDYGTVLNRFIIQGALGVPLTVYGTGGQTRGFIHITDTARCIEIAVSNPPKTGDKVQIFNQIAETLRVGDLAKLVGEKTGVSINYLKNPRLESAENELEVANRKFRGLGLDPILLDSNLGLVDEVRTIASKYADRCVREKILPASFWNKKRAAECEVNTLEGNK 466
            M RL +L LLL+A AHAF+   S+ K G SR+     RQ RAESS L   T+R S T+TMMAA   PKKIVVLGGDGFCGWPT+LYLSEKGHDVIIVDNLSRRNIDNELGC SLTPI S ETR+ AWE+VSGR M+FVNLDVA+DY E+V+LFL EKPD VVHFAEQRAAPYSQKGAKQKRYTVDNNVSGTNNLLVAVVESGLDIH+VHLGTMGVYGYGTSGGEIPEGYIDVILPGGRPSSILHPAYPGSVYHTTKCLDALLFQFYNKNDG++VTDLHQGIVWGTNTPQTIKDERLINRFDYDGDYGTVLNRFI+QGALGVPLTVYGTGGQTRGFIHITDTARCIEIAVSNPP+ G+KVQIFNQIAETLRVGDLAKLV EKTGV INYLKNPRLESAENELEVANRKFRGLGLDPILLDSNLGLVDEV+TIA+KYADRCVREKILPASFWN++R AECE NTLEG K
Sbjct:    1 MARLLLLSLLLIASAHAFHFHSSLCKTGASRMSSFRARQQRAESSSLMLATSRRSHTMTMMAAGSKPKKIVVLGGDGFCGWPTSLYLSEKGHDVIIVDNLSRRNIDNELGCSSLTPIESPETRVKAWEKVSGRTMRFVNLDVARDYQELVQLFLAEKPDAVVHFAEQRAAPYSQKGAKQKRYTVDNNVSGTNNLLVAVVESGLDIHVVHLGTMGVYGYGTSGGEIPEGYIDVILPGGRPSSILHPAYPGSVYHTTKCLDALLFQFYNKNDGIRVTDLHQGIVWGTNTPQTIKDERLINRFDYDGDYGTVLNRFIMQGALGVPLTVYGTGGQTRGFIHITDTARCIEIAVSNPPQAGEKVQIFNQIAETLRVGDLAKLVAEKTGVDINYLKNPRLESAENELEVANRKFRGLGLDPILLDSNLGLVDEVKTIAAKYADRCVREKILPASFWNRRREAECEANTLEGGK 467          
The following BLAST results are available for this feature:
BLAST of NO07G01150.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1
Match NameE-valueIdentityDescription
EWM27257.14.600e-23486.51udp-sulfoquinovose synthase [Nannochloropsis gadit... [more]
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO07G01150NO07G01150Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO07G01150.1NO07G01150.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO07G01150.1.cds1NO07G01150.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO07G01150.1.cds2NO07G01150.1.cds2Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO07G01150.1 ID=NO07G01150.1|Name=NO07G01150.1|organism=Nannochloropsis oceanica|type=mRNA|length=1398bp
ATGTTCCGATTGTTTGTGCTACCCTTACTGCTGCTGGCGGGCGCACATGC
CTTCAACCCGTCGGTGGGTAAGGCGGGGCTATCCCGCCTGCCTCCGGTCG
GAGGACGTCAGGTGCGCGCTGAATCTTCTCTTTTGAGACCTGTCACTGCC
CGGGCAAGTCAAACCATAACCATGATGGCAGCAGTGGGGAATCCCAAGAA
GATTGTGGTACTAGGCGGCGACGGCTTCTGCGGCTGGCCCACCGCCCTCT
ATCTCTCGGAGAAAGGCCATGACGTCATCATCGTCGACAACCTCTCCCGG
CGAAATATCGACAACGAACTCGGCTGCGTCTCCCTGACCCCCATCTCAAG
CATGGAGACCCGCATCGCTGCCTGGGAACAAGTCAGTGGCAGACGCATGA
AATTTGTCAACCTCGATGTAGCGAAGGATTACCACGAGATGGTCAAGCTC
TTCCTCGACGAAAAACCCGACACCGTCGTCCATTTTGCCGAGCAACGGGC
CGCACCCTACTCCCAGAAGGGGGCGAAGCAAAAGAGGTACACCGTCGATA
ACAACGTCTCGGGTACCAATAACCTGCTAGTGGCAGTGGTGGAGAGCGGC
CTCGACATCCACATCGTCCATCTCGGCACCATGGGGGTCTACGGATACGG
GACCAGCGGGGGCGAGATCCCAGAGGGCTATATCGACGTCATCCTCCCTG
GTGGCCGACCCTCGTCGATCCTCCACCCAGCTTACCCCGGCTCAGTCTAT
CACACCACCAAGTGCTTGGATGCCTTGTTGTTCCAATTTTATAATAAAAA
CGACGGCGTTAAGGTCACGGACTTACACCAGGGCATCGTGTGGGGCACCA
ACACGCCTCAAACCATCAAGGACGAAAGGTTGATCAATCGCTTTGATTAC
GATGGGGACTACGGCACAGTGTTGAACCGCTTCATCATTCAAGGCGCTCT
GGGCGTGCCCTTGACAGTGTATGGCACGGGGGGCCAAACGCGCGGGTTTA
TCCACATTACCGACACTGCCCGTTGCATCGAAATTGCCGTTTCCAACCCT
CCGAAAACCGGTGACAAAGTTCAAATTTTCAATCAAATTGCCGAAACCTT
GCGAGTGGGTGATTTGGCGAAGCTGGTGGGAGAAAAGACGGGCGTGAGCA
TCAACTATCTCAAGAACCCACGATTAGAAAGCGCGGAAAACGAGCTGGAG
GTCGCGAATAGGAAATTCCGTGGCTTGGGTTTAGACCCGATATTGTTGGA
TTCGAATTTGGGATTAGTGGATGAGGTGAGAACAATTGCGTCTAAGTACG
CGGATCGATGTGTGCGGGAGAAGATCCTGCCGGCCAGCTTTTGGAATAAG
AAGAGGGCGGCGGAGTGTGAAGTGAACACATTGGAGGGGAACAAGTAG
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protein sequence of NO07G01150.1

>NO07G01150.1-protein ID=NO07G01150.1-protein|Name=NO07G01150.1|organism=Nannochloropsis oceanica|type=polypeptide|length=466bp
MFRLFVLPLLLLAGAHAFNPSVGKAGLSRLPPVGGRQVRAESSLLRPVTA
RASQTITMMAAVGNPKKIVVLGGDGFCGWPTALYLSEKGHDVIIVDNLSR
RNIDNELGCVSLTPISSMETRIAAWEQVSGRRMKFVNLDVAKDYHEMVKL
FLDEKPDTVVHFAEQRAAPYSQKGAKQKRYTVDNNVSGTNNLLVAVVESG
LDIHIVHLGTMGVYGYGTSGGEIPEGYIDVILPGGRPSSILHPAYPGSVY
HTTKCLDALLFQFYNKNDGVKVTDLHQGIVWGTNTPQTIKDERLINRFDY
DGDYGTVLNRFIIQGALGVPLTVYGTGGQTRGFIHITDTARCIEIAVSNP
PKTGDKVQIFNQIAETLRVGDLAKLVGEKTGVSINYLKNPRLESAENELE
VANRKFRGLGLDPILLDSNLGLVDEVRTIASKYADRCVREKILPASFWNK
KRAAECEVNTLEGNK*
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mRNA from alignment at chr7:375360..377091-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO07G01150.1 ID=NO07G01150.1|Name=NO07G01150.1|organism=Nannochloropsis oceanica|type=mRNA|length=1732bp|location=Sequence derived from alignment at chr7:375360..377091- (Nannochloropsis oceanica)
ATGTTCCGATTGTTTGTGCTACCCTTACTGCTGCTGGCGGGCGCACATGC CTTCAACCCGTCGGTGGGTAAGGCGGGGCTATCCCGCCTGCCTCCGGTCG GAGGACGTCAGGTGCGCGCTGAATCTTCTCTTTTGAGACCTGTCACTGCC CGGGCAAGTCAAACCATAACCATGATGGCAGCAGTGGGGAATCCCAAGAA GATTGTGGTACTAGGTACGTAGTTGGTTGGGTGCATGGGAGAGGGGAGGA GGGGGGAGGTGGACAAACGGACGGTGGGGAGGCTCGCCGGGTCGCTTATT TTAAGCGGGATCGAAAGTGGCGACCGTTGCGTTGTAATGAGGCGAGGTTG CGAAGATCAAGTATGTGTGACTTTATCGTCATTGACGCAGAATTGATTTG TGAAGATGGAGTAGGAGAGATGGGGGGGGAAAGGAGGCGGCATAAATAAA GTGCCATACTGTCGTTATAATCGTCATACAGTAACCACATCAACCCTTCA TTTACTCCATCCCTTCCCTCCCTCCTTCATCCTCACCTTTCCCCGCAGGC GGCGACGGCTTCTGCGGCTGGCCCACCGCCCTCTATCTCTCGGAGAAAGG CCATGACGTCATCATCGTCGACAACCTCTCCCGGCGAAATATCGACAACG AACTCGGCTGCGTCTCCCTGACCCCCATCTCAAGCATGGAGACCCGCATC GCTGCCTGGGAACAAGTCAGTGGCAGACGCATGAAATTTGTCAACCTCGA TGTAGCGAAGGATTACCACGAGATGGTCAAGCTCTTCCTCGACGAAAAAC CCGACACCGTCGTCCATTTTGCCGAGCAACGGGCCGCACCCTACTCCCAG AAGGGGGCGAAGCAAAAGAGGTACACCGTCGATAACAACGTCTCGGGTAC CAATAACCTGCTAGTGGCAGTGGTGGAGAGCGGCCTCGACATCCACATCG TCCATCTCGGCACCATGGGGGTCTACGGATACGGGACCAGCGGGGGCGAG ATCCCAGAGGGCTATATCGACGTCATCCTCCCTGGTGGCCGACCCTCGTC GATCCTCCACCCAGCTTACCCCGGCTCAGTCTATCACACCACCAAGTGCT TGGATGCCTTGTTGTTCCAATTTTATAATAAAAACGACGGCGTTAAGGTC ACGGACTTACACCAGGGCATCGTGTGGGGCACCAACACGCCTCAAACCAT CAAGGACGAAAGGTTGATCAATCGCTTTGATTACGATGGGGACTACGGCA CAGTGTTGAACCGCTTCATCATTCAAGGCGCTCTGGGCGTGCCCTTGACA GTGTATGGCACGGGGGGCCAAACGCGCGGGTTTATCCACATTACCGACAC TGCCCGTTGCATCGAAATTGCCGTTTCCAACCCTCCGAAAACCGGTGACA AAGTTCAAATTTTCAATCAAATTGCCGAAACCTTGCGAGTGGGTGATTTG GCGAAGCTGGTGGGAGAAAAGACGGGCGTGAGCATCAACTATCTCAAGAA CCCACGATTAGAAAGCGCGGAAAACGAGCTGGAGGTCGCGAATAGGAAAT TCCGTGGCTTGGGTTTAGACCCGATATTGTTGGATTCGAATTTGGGATTA GTGGATGAGGTGAGAACAATTGCGTCTAAGTACGCGGATCGATGTGTGCG GGAGAAGATCCTGCCGGCCAGCTTTTGGAATAAGAAGAGGGCGGCGGAGT GTGAAGTGAACACATTGGAGGGGAACAAGTAG
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Coding sequence (CDS) from alignment at chr7:375360..377091-

>NO07G01150.1 ID=NO07G01150.1|Name=NO07G01150.1|organism=Nannochloropsis oceanica|type=CDS|length=1398bp|location=Sequence derived from alignment at chr7:375360..377091- (Nannochloropsis oceanica)
ATGTTCCGATTGTTTGTGCTACCCTTACTGCTGCTGGCGGGCGCACATGC
CTTCAACCCGTCGGTGGGTAAGGCGGGGCTATCCCGCCTGCCTCCGGTCG
GAGGACGTCAGGTGCGCGCTGAATCTTCTCTTTTGAGACCTGTCACTGCC
CGGGCAAGTCAAACCATAACCATGATGGCAGCAGTGGGGAATCCCAAGAA
GATTGTGGTACTAGGCGGCGACGGCTTCTGCGGCTGGCCCACCGCCCTCT
ATCTCTCGGAGAAAGGCCATGACGTCATCATCGTCGACAACCTCTCCCGG
CGAAATATCGACAACGAACTCGGCTGCGTCTCCCTGACCCCCATCTCAAG
CATGGAGACCCGCATCGCTGCCTGGGAACAAGTCAGTGGCAGACGCATGA
AATTTGTCAACCTCGATGTAGCGAAGGATTACCACGAGATGGTCAAGCTC
TTCCTCGACGAAAAACCCGACACCGTCGTCCATTTTGCCGAGCAACGGGC
CGCACCCTACTCCCAGAAGGGGGCGAAGCAAAAGAGGTACACCGTCGATA
ACAACGTCTCGGGTACCAATAACCTGCTAGTGGCAGTGGTGGAGAGCGGC
CTCGACATCCACATCGTCCATCTCGGCACCATGGGGGTCTACGGATACGG
GACCAGCGGGGGCGAGATCCCAGAGGGCTATATCGACGTCATCCTCCCTG
GTGGCCGACCCTCGTCGATCCTCCACCCAGCTTACCCCGGCTCAGTCTAT
CACACCACCAAGTGCTTGGATGCCTTGTTGTTCCAATTTTATAATAAAAA
CGACGGCGTTAAGGTCACGGACTTACACCAGGGCATCGTGTGGGGCACCA
ACACGCCTCAAACCATCAAGGACGAAAGGTTGATCAATCGCTTTGATTAC
GATGGGGACTACGGCACAGTGTTGAACCGCTTCATCATTCAAGGCGCTCT
GGGCGTGCCCTTGACAGTGTATGGCACGGGGGGCCAAACGCGCGGGTTTA
TCCACATTACCGACACTGCCCGTTGCATCGAAATTGCCGTTTCCAACCCT
CCGAAAACCGGTGACAAAGTTCAAATTTTCAATCAAATTGCCGAAACCTT
GCGAGTGGGTGATTTGGCGAAGCTGGTGGGAGAAAAGACGGGCGTGAGCA
TCAACTATCTCAAGAACCCACGATTAGAAAGCGCGGAAAACGAGCTGGAG
GTCGCGAATAGGAAATTCCGTGGCTTGGGTTTAGACCCGATATTGTTGGA
TTCGAATTTGGGATTAGTGGATGAGGTGAGAACAATTGCGTCTAAGTACG
CGGATCGATGTGTGCGGGAGAAGATCCTGCCGGCCAGCTTTTGGAATAAG
AAGAGGGCGGCGGAGTGTGAAGTGAACACATTGGAGGGGAACAAGTAG
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Synonyms
Publications