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Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| chr7 | genome | chr7:371191..374098 - |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
BLAST of NO07G01130.1 vs.
Match: EWM27264.1 (hypothetical protein Naga_100038g7 [Nannochloropsis gaditana]) HSP 1 Score: 370.2 bits (949), Expect = 8.400e-99 Identity = 215/369 (58.27%), Postives = 259/369 (70.19%), Query Frame = 0
Query: 45 MRRVVVCTRHLQAAASAASHRQAPVASAARQRPRVRPLSTSPPVTAAPPS-APSPGTVPGVPGAAAGSSTQPYKPGFFSRNVGKIVLVTLGSLIAYLYRSSENKTRSKALKIFLEDQRAIEPWEIDELRMANWGTWDQALFHEVAAAVVAAFPERKASSYQALIEVVAKVLGGHGKRLQMGHYLDRVVLCTQPEEGREGREVDVLVFLCALSLSLNLDVDERVAALFDTMLVLRGGLGGEGGGG-------YMDRRALEKLLGGLVATAQVPAEVLVQPDKTMEYPFQSYKVASIEEIVDKAIVEGKERYEKRVKDAKKAGREPPVPPPLAGEEGGRPGDGGRLSLEGLVQMLETKAICAWGECYQGRE 406
MRR+V+C+ +QA+ +A R + + R R R R LST TA+P + AP+P + GA S +P PG SRN+GKIVL+TL SLIAYLYRSSEN+ RSKALK++LEDQR+IEPWEIDE RMANWGTWD+ALF EVA + AFP RK++SY ALI VVA LG H KRLQ+GHYLDRVVLC +PE EG+EVDVL FLCALSLSLN DV+ERV AL D + G G G + RR LE+L+ GLVATAQ+PAE LV+ D YPFQ+Y+VASIEE+V KA EGK ++EK +KDA KAG EPP PPPL E+ + G G LS LV++L TKAIC WGECYQGR+
Sbjct: 1 MRRLVICSHTVQASNNAL--RLSSFRTVMRHRTRPRHLSTGSTTTASPATPAPAPPSTSAT-GAPDMSPPKP-SPGIISRNIGKIVLLTLSSLIAYLYRSSENQKRSKALKVYLEDQRSIEPWEIDEFRMANWGTWDRALFQEVANELYMAFPGRKSASYPALIRVVAHTLGRHQKRLQLGHYLDRVVLCLEPE---EGKEVDVLTFLCALSLSLNFDVEERVGALHDAVTAADCGHAGSSSAGKGEEGVRKIHRRELEQLVAGLVATAQIPAEALVKADPERSYPFQAYQVASIEELVMKASTEGKAKHEKAMKDAVKAGLEPPKPPPLGTEQEDK-GVGEGLSARELVEVLSTKAICVWGECYQGRD 361
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO07G01130.1 ID=NO07G01130.1|Name=NO07G01130.1|organism=Nannochloropsis oceanica|type=mRNA|length=2575bp
CTGGGAATCTTCGTCTGGACCAATTTCTTGATACTCTTGTGCAACTCGGA
GGGAGCCGCCCGGATAGCAAAATGCCTCTGTTCCACCAGCCCCGTCGCAG
CGTCGTAATCGAATAAAACAATCCGCCGACAGTCAGTGAGCTTCACCGTG
TTCACATTCAGAGGGGGGAACATGTTCTGAAATGTGATCTTCATCAGCTT
GACATAGGGTGGACTGCTGGCATCCCCAAAATTATTCAGGACCACCAATG
GTGCAGTTTGATAGGCACTCAAGCTCTCATACGGTCGCTTTTGTGTCGCC
CGCACGTGATGCTGCAAGCAATACCGCTCCACCTTGAAAGTCAGAGTAGG
GCCACGCGGGAACCGGGCAATCCTTAATTTCAGCGCCGCGGGGCTCTGCG
AAAATGATAAGATGTGCGTCAGTCCTAAGTGGCCCGCCACGGCAGCAAAG
TCCTTCATGCGATTGGTGCGCCGTTCCTTAAGGCGAGAGGCCGTCTCCGG
CCCCATAAGCCGCCGCAGTTCCGCTACCAAACTCCCCACCTCGGGGGTGG
TCCGCCCCTTTCTCAGGACCAGGCTCTTGGGCACCCGCTCCTCTTCTGGG
ATGCTTGCTTGCTGCTGCGGGTTGGAAAGGGGGACGTGTGTCCGGCGCTT
GCGTCGCTTGCCCATGGCTGCTGGCATGTGAATGGATGGGGGAAAGGAGG
TTGAAAGAGTAAGGGCGGGGATGTGGGTCATGTAGTGGATAGGAAAGCCT
CAGACACCAAGAGAAGAAAAACTACGCATGCTCATTATACACGTGGTGTT
AGTGCGGTGGATGTAAACGTGGTGCATGTTGCGGGCGTATATTTTTGGTA
TCCTCGAATCCAAGTGAGTATGTCTGTCATCATGTCCCAAAATGGAGCAT
TCCATCATCCATGCGACTTGTCAAACAATCCCATACGATTTGCTTATCGC
CCTCTCACACCACCACCACCTGTATCACGGTACAAGGAAGAGCTTGGGCG
TTCGTAGCAGTACCACGTGAAGGGCAAGCAACGCGGGCATCAATGAGGAG
AGTTGTCGTTTGCACGCGTCATCTGCAAGCAGCAGCTTCAGCGGCTTCTC
ATCGACAGGCGCCCGTGGCCAGTGCGGCGCGTCAGCGGCCACGGGTGCGA
CCCCTCAGCACAAGTCCTCCCGTCACAGCAGCTCCTCCCAGCGCTCCTTC
TCCTGGAACTGTGCCTGGCGTCCCAGGCGCCGCCGCGGGCTCTTCTACAC
AGCCGTACAAACCCGGCTTCTTTAGCCGCAACGTTGGCAAGATTGTGCTC
GTTACCTTGGGCTCATTGATCGCCTACTTATACCGCTCGTCTGAGAACAA
GACGCGTTCGAAAGCTTTAAAAATCTTCCTAGAAGACCAACGTGCCATCG
AACCCTGGGAGATCGACGAGCTGCGTATGGCCAACTGGGGGACTTGGGAC
CAGGCTCTCTTCCATGAGGTAGCCGCTGCTGTTGTAGCTGCTTTCCCGGA
GCGAAAGGCATCGTCGTACCAAGCGTTGATTGAGGTGGTGGCGAAGGTAT
TGGGGGGTCACGGGAAGAGGTTGCAAATGGGCCATTACTTGGACCGCGTG
GTGTTGTGCACGCAGCCGGAGGAAGGGAGGGAGGGGAGAGAGGTGGATGT
GCTGGTGTTCCTGTGTGCGCTATCCTTGTCGTTGAATCTTGACGTGGACG
AACGAGTGGCCGCTTTATTCGACACCATGCTGGTTCTAAGAGGAGGCTTG
GGAGGGGAGGGAGGAGGGGGCTACATGGATCGGAGGGCGCTTGAGAAGCT
GTTGGGAGGGCTAGTGGCCACGGCGCAGGTACCGGCGGAGGTGTTGGTGC
AACCGGACAAGACAATGGAGTATCCCTTCCAGTCATACAAAGTGGCCAGT
ATCGAGGAGATTGTCGACAAGGCCATAGTCGAGGGGAAGGAAAGGTATGA
GAAGCGAGTGAAGGATGCGAAGAAAGCGGGGCGGGAGCCACCAGTGCCAC
CGCCGCTGGCAGGAGAGGAGGGGGGAAGGCCGGGTGATGGGGGGAGGTTG
AGCTTGGAGGGGTTGGTTCAGATGTTGGAAACGAAGGCGATATGTGCTTG
GGGTGAGTGCTACCAAGGGAGGGAATAGGGAAAGAAAGAGGGAGGGGGGG
GGGAGGAAGGGAACGAAGCACTGGCACCTGAGCAGGAAACAAAATATGAC
AAATCAAGATAAAACTACTTTTTCTCGAAATCATTTTTTTGCTTTCATTT
GCCTGGCCCTCGTTGCAATCGCTTAAAGATTTCCTCACTCTTCTTAACAG
TGTAAGAAATACAGGCTTTTTCGTAATATTCTTGTCCTGGTGGGGCGTTC
TCAATCTTGTCGATTATATCAGAGAGGAGATGCGCCCGTTCAACCTCAAT
GCCGTGAGCGAGGCTGAGGCGGGAGAAGTGTACTGTGCATGGCAGTGGGA
AGTTTAGAGTGGAAACTCGAAATCGAATCGGATCAAAAAGTAGAATGTAA
GCATATAATACATAATCGGCTCAACCCTTTTCCCTTGCTCTTCTACCTCT
GCTCTCGCCCTCCCTCCCCCCCTCC back to topprotein sequence of NO07G01130.1 >NO07G01130.1-protein ID=NO07G01130.1-protein|Name=NO07G01130.1|organism=Nannochloropsis oceanica|type=polypeptide|length=406bp
MRLVKQSHTICLSPSHTTTTCITVQGRAWAFVAVPREGQATRASMRRVVV
CTRHLQAAASAASHRQAPVASAARQRPRVRPLSTSPPVTAAPPSAPSPGT
VPGVPGAAAGSSTQPYKPGFFSRNVGKIVLVTLGSLIAYLYRSSENKTRS
KALKIFLEDQRAIEPWEIDELRMANWGTWDQALFHEVAAAVVAAFPERKA
SSYQALIEVVAKVLGGHGKRLQMGHYLDRVVLCTQPEEGREGREVDVLVF
LCALSLSLNLDVDERVAALFDTMLVLRGGLGGEGGGGYMDRRALEKLLGG
LVATAQVPAEVLVQPDKTMEYPFQSYKVASIEEIVDKAIVEGKERYEKRV
KDAKKAGREPPVPPPLAGEEGGRPGDGGRLSLEGLVQMLETKAICAWGEC
YQGRE* back to topmRNA from alignment at chr7:371191..374098- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO07G01130.1 ID=NO07G01130.1|Name=NO07G01130.1|organism=Nannochloropsis oceanica|type=mRNA|length=2908bp|location=Sequence derived from alignment at chr7:371191..374098- (Nannochloropsis oceanica)
CTGGGAATCTTCGTCTGGACCAATTTCTTGATACTCTTGTGCAACTCGGA
GGGAGCCGCCCGGATAGCAAAATGCCTCTGTTCCACCAGCCCCGTCGCAG
CGTCGTAATCGAATAAAACAATCCGCCGACAGTCAGTGAGCTTCACCGTG
TTCACATTCAGAGGGGGGAACATGTTCTGAAATGTGATCTTCATCAGCTT
GACATAGGGTGGACTGCTGGCATCCCCAAAATTATTCAGGACCACCAATG
GTGCAGTTTGATAGGCACTCAAGCTCTCATACGGTCGCTTTTGTGTCGCC
CGCACGTGATGCTGCAAGCAATACCGCTCCACCTTGAAAGTCAGAGTAGG
GCCACGCGGGAACCGGGCAATCCTTAATTTCAGCGCCGCGGGGCTCTGCG
AAAATGATAAGATGTGCGTCAGTCCTAAGTGGCCCGCCACGGCAGCAAAG
TCCTTCATGCGATTGGTGCGCCGTTCCTTAAGGCGAGAGGCCGTCTCCGG
CCCCATAAGCCGCCGCAGTTCCGCTACCAAACTCCCCACCTCGGGGGTGG
TCCGCCCCTTTCTCAGGACCAGGCTCTTGGGCACCCGCTCCTCTTCTGGG
ATGCTTGCTTGCTGCTGCGGGTTGGAAAGGGGGACGTGTGTCCGGCGCTT
GCGTCGCTTGCCCATGGCTGCTGGCATGTGAATGGATGGGGGAAAGGAGG
TTGAAAGAGTAAGGGCGGGGATGTGGGTCATGTAGTGGATAGGAAAGCCT
CAGACACCAAGAGAAGAAAAACTACGCATGCTCATTATACACGTGGTGTT
AGTGCGGTGGATGTAAACGTGGTGCATGTTGCGGGCGTATATTTTTGGTA
TCCTCGAATCCAAGTGAGTATGTCTGTCATCATGTCCCAAAATGGAGCAT
TCCATCATCCATGCGACTTGTCAAACAATCCCATACGATTTGCTTATCGC
CCTCTCACACCACCACCACCTGTATCACGGTACAAGGAAGAGCTTGGGCG
TTCGTAGCAGTACCACGTGAAGGGCAAGCAACGCGGGCATCAATGAGGAG
AGTTGTCGTTTGGTACGTACACGGCAGGAGAGGAGGTCCCAGCCCGTCAA
GCTTCCCACATCCCATACTTAACCCTTTCTCACTCCGTTCTATACCCTAC
AGCACGCGTCATCTGCAAGCAGCAGCTTCAGCGGCTTCTCATCGACAGGC
GCCCGTGGCCAGTGCGGCGCGTCAGCGGCCACGGGTGCGACCCCTCAGCA
CAAGTCCTCCCGTCACAGCAGCTCCTCCCAGCGCTCCTTCTCCTGGAACT
GTGCCTGGCGTCCCAGGCGCCGCCGCGGGCTCTTCTACACAGCCGTACAA
ACCCGGCTTCTTTAGCCGCAACGTTGGCAAGATTGTGCTCGTTACCTTGG
GCTCATTGATCGCCTACTTATACCGCTCGTCTGAGGTGCGTGTTTTGGTT
GTGGATGTGTCCACCTCCAGCTCTCTCTCCCTACCTCTTTGCCAGCTAAA
TGCTTGTTGTAAATGTCGTCAATATCATCCACTTTCTCTTTTAAGTTCCG
AAGTTATGTGTGAGGGAGCAGCCGTAGGGCCATCGTCTGTTTCTTTGCTC
ACCTTGACAAGCAAACGGAAAGCAACGAAATAATCGCACCCCTCCTTCCA
TTCTTCCCTCCCTCGCACCTTTCCCCAGAACAAGACGCGTTCGAAAGCTT
TAAAAATCTTCCTAGAAGACCAACGTGCCATCGAACCCTGGGAGATCGAC
GAGCTGCGTATGGCCAACTGGGGGACTTGGGACCAGGCTCTCTTCCATGA
GGTAGCCGCTGCTGTTGTAGCTGCTTTCCCGGAGCGAAAGGCATCGTCGT
ACCAAGCGTTGATTGAGGTGGTGGCGAAGGTATTGGGGGGTCACGGGAAG
AGGTTGCAAATGGGCCATTACTTGGACCGCGTGGTGTTGTGCACGCAGCC
GGAGGAAGGGAGGGAGGGGAGAGAGGTGGATGTGCTGGTGTTCCTGTGTG
CGCTATCCTTGTCGTTGAATCTTGACGTGGACGAACGAGTGGCCGCTTTA
TTCGACACCATGCTGGTTCTAAGAGGAGGCTTGGGAGGGGAGGGAGGAGG
GGGCTACATGGATCGGAGGGCGCTTGAGAAGCTGTTGGGAGGGCTAGTGG
CCACGGCGCAGGTACCGGCGGAGGTGTTGGTGCAACCGGACAAGACAATG
GAGTATCCCTTCCAGTCATACAAAGTGGCCAGTATCGAGGAGATTGTCGA
CAAGGCCATAGTCGAGGGGAAGGAAAGGTATGAGAAGCGAGTGAAGGATG
CGAAGAAAGCGGGGCGGGAGCCACCAGTGCCACCGCCGCTGGCAGGAGAG
GAGGGGGGAAGGCCGGGTGATGGGGGGAGGTTGAGCTTGGAGGGGTTGGT
TCAGATGTTGGAAACGAAGGCGATATGTGCTTGGGGTGAGTGCTACCAAG
GGAGGGAATAGGGAAAGAAAGAGGGAGGGGGGGGGGAGGAAGGGAACGAA
GCACTGGCACCTGAGCAGGAAACAAAATATGACAAATCAAGATAAAACTA
CTTTTTCTCGAAATCATTTTTTTGCTTTCATTTGCCTGGCCCTCGTTGCA
ATCGCTTAAAGATTTCCTCACTCTTCTTAACAGTGTAAGAAATACAGGCT
TTTTCGTAATATTCTTGTCCTGGTGGGGCGTTCTCAATCTTGTCGATTAT
ATCAGAGAGGAGATGCGCCCGTTCAACCTCAATGCCGTGAGCGAGGCTGA
GGCGGGAGAAGTGTACTGTGCATGGCAGTGGGAAGTTTAGAGTGGAAACT
CGAAATCGAATCGGATCAAAAAGTAGAATGTAAGCATATAATACATAATC
GGCTCAACCCTTTTCCCTTGCTCTTCTACCTCTGCTCTCGCCCTCCCTCC
CCCCCTCC back to topCoding sequence (CDS) from alignment at chr7:371191..374098- >NO07G01130.1 ID=NO07G01130.1|Name=NO07G01130.1|organism=Nannochloropsis oceanica|type=CDS|length=1218bp|location=Sequence derived from alignment at chr7:371191..374098- (Nannochloropsis oceanica)
ATGCGACTTGTCAAACAATCCCATACGATTTGCTTATCGCCCTCTCACAC
CACCACCACCTGTATCACGGTACAAGGAAGAGCTTGGGCGTTCGTAGCAG
TACCACGTGAAGGGCAAGCAACGCGGGCATCAATGAGGAGAGTTGTCGTT
TGCACGCGTCATCTGCAAGCAGCAGCTTCAGCGGCTTCTCATCGACAGGC
GCCCGTGGCCAGTGCGGCGCGTCAGCGGCCACGGGTGCGACCCCTCAGCA
CAAGTCCTCCCGTCACAGCAGCTCCTCCCAGCGCTCCTTCTCCTGGAACT
GTGCCTGGCGTCCCAGGCGCCGCCGCGGGCTCTTCTACACAGCCGTACAA
ACCCGGCTTCTTTAGCCGCAACGTTGGCAAGATTGTGCTCGTTACCTTGG
GCTCATTGATCGCCTACTTATACCGCTCGTCTGAGAACAAGACGCGTTCG
AAAGCTTTAAAAATCTTCCTAGAAGACCAACGTGCCATCGAACCCTGGGA
GATCGACGAGCTGCGTATGGCCAACTGGGGGACTTGGGACCAGGCTCTCT
TCCATGAGGTAGCCGCTGCTGTTGTAGCTGCTTTCCCGGAGCGAAAGGCA
TCGTCGTACCAAGCGTTGATTGAGGTGGTGGCGAAGGTATTGGGGGGTCA
CGGGAAGAGGTTGCAAATGGGCCATTACTTGGACCGCGTGGTGTTGTGCA
CGCAGCCGGAGGAAGGGAGGGAGGGGAGAGAGGTGGATGTGCTGGTGTTC
CTGTGTGCGCTATCCTTGTCGTTGAATCTTGACGTGGACGAACGAGTGGC
CGCTTTATTCGACACCATGCTGGTTCTAAGAGGAGGCTTGGGAGGGGAGG
GAGGAGGGGGCTACATGGATCGGAGGGCGCTTGAGAAGCTGTTGGGAGGG
CTAGTGGCCACGGCGCAGGTACCGGCGGAGGTGTTGGTGCAACCGGACAA
GACAATGGAGTATCCCTTCCAGTCATACAAAGTGGCCAGTATCGAGGAGA
TTGTCGACAAGGCCATAGTCGAGGGGAAGGAAAGGTATGAGAAGCGAGTG
AAGGATGCGAAGAAAGCGGGGCGGGAGCCACCAGTGCCACCGCCGCTGGC
AGGAGAGGAGGGGGGAAGGCCGGGTGATGGGGGGAGGTTGAGCTTGGAGG
GGTTGGTTCAGATGTTGGAAACGAAGGCGATATGTGCTTGGGGTGAGTGC
TACCAAGGGAGGGAATAG back to top
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