NO07G01110.1, NO07G01110.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO07G01110.1
Unique NameNO07G01110.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1882
Alignment locationchr7:367759..369794 -

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Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr7genomechr7:367759..369794 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
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BLAST of NO07G01110.1 vs.
Match: EWM27292.1 (bifunctional arginine demethylase and lysyl-hydroxylase psr, partial [Nannochloropsis gaditana])

HSP 1 Score: 587.8 bits (1514), Expect = 2.900e-164
Identity = 293/403 (72.70%), Postives = 340/403 (84.37%), Query Frame = 0 
Query:    1 MGWRRRLEEAKQKHRPRLKDWGRDAFATDRKLDFVALNYLPSPHSQHDKPQQHKTGMVDRMHCRDLSPEAFIDQYEKLSKPVIIQGVPEAEGWKATDRWASDGALRRRFRKYSFKCGEDDDGRSIRVRLKHFLKYVGKQKDDSPLYIFDSTFDDDKEAKALLDDYAVPSYFPDDFFSLVGEKRRPPYRWFLVGPRRSGTSLHIDPLGTSAWNTVLTGKKRWILFPPSTPRDLAKGKALYRKGEDDEPINYFADILPRLRALPASEELVFYEFIQEEGETVFVPGGWWHAVLNLEDSVAVTQNFASRVNFSAVWRKTRTGRKKMACRWLKRLEEVFPELAATAKKLNEVDGFRMQSKKEREEAKRKKEWEKKRRRKEKEEEKEKAKEKKRDRRAGSDSSSSSSS 404
            MGWR RLEEAK KHRPRLKDW RD FA +R+ +F AL +LPS    ++  ++++ G VDR+HCRDLS E FI +YE+ SKPVIIQG+PEAE WKAT+ W  + ALRRR RKY+FKCGEDDDGRS+RVRLKHF KY+ KQKDDSPLYIFDST+DD+KEAK LLDDY VPSYFPDDFFSLVGE+RRPPYRWFLVGPRRSGTSLHIDPLGTSAWNTVLTG+KRW+LFPP T   LAKGKALYRKGEDDEPINYF DILPR+R+LPA+E LVF+EFIQE GETVFVPGGWWHAVLNLEDSVAVTQNFASR NFSAVWRKTR+GRKKMA RWL +L+E +PEL   A+KLNE+D F M +K+E  E KR+K+  +  ++KE+EE + + + +K  R+  S SSSSSSS
Sbjct:    1 MGWRSRLEEAKGKHRPRLKDWARDGFAHNRRSEFEALAHLPSKQRDNED-KEYRRGGVDRVHCRDLSLETFIREYEQASKPVIIQGIPEAEHWKATENWTKESALRRRIRKYTFKCGEDDDGRSVRVRLKHFFKYLAKQKDDSPLYIFDSTYDDNKEAKVLLDDYKVPSYFPDDFFSLVGERRRPPYRWFLVGPRRSGTSLHIDPLGTSAWNTVLTGRKRWVLFPPRTSASLAKGKALYRKGEDDEPINYFVDILPRMRSLPATEGLVFHEFIQEPGETVFVPGGWWHAVLNLEDSVAVTQNFASRANFSAVWRKTRSGRKKMAWRWLTKLDESYPELGRLARKLNEMDDFHMLTKEEMVEKKRRKKDREDAKKKEEEERRARKERQKEQRKYPSSSSSSSSS 402
The following BLAST results are available for this feature:
BLAST of NO07G01110.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1
Match NameE-valueIdentityDescription
EWM27292.12.900e-16472.70bifunctional arginine demethylase and lysyl-hydrox... [more]
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO07G01110NO07G01110Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO07G01110.1NO07G01110.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO07G01110.1.cds1NO07G01110.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO07G01110.1.cds2NO07G01110.1.cds2Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO07G01110.1 ID=NO07G01110.1|Name=NO07G01110.1|organism=Nannochloropsis oceanica|type=mRNA|length=1882bp
ACGACAGAATTTCACCACATTTCACAGGTCTCTATCACTGCTATGGGTTG
GCGACGCCGACTCGAGGAAGCCAAGCAAAAACACAGGCCCCGGCTCAAGG
ACTGGGGCCGAGATGCGTTTGCAACTGATCGCAAGCTGGACTTTGTGGCC
CTGAATTACCTGCCTTCCCCTCACAGCCAGCACGATAAGCCTCAACAGCA
TAAAACAGGGATGGTGGACCGAATGCACTGTCGCGACCTGAGCCCGGAGG
CGTTTATTGATCAGTACGAGAAGCTGAGCAAGCCAGTGATCATCCAGGGT
GTGCCCGAGGCAGAGGGGTGGAAGGCCACGGATCGTTGGGCCTCGGACGG
CGCGCTGCGTCGACGCTTTCGCAAGTACTCGTTCAAGTGTGGAGAGGATG
ATGACGGACGGTCGATTCGAGTGCGACTGAAGCATTTTTTAAAGTACGTG
GGCAAGCAGAAGGATGACTCCCCGCTTTACATCTTCGATTCCACCTTTGA
CGACGACAAGGAAGCGAAGGCCTTACTGGACGACTACGCTGTGCCCTCCT
ACTTTCCCGATGACTTCTTTTCACTTGTGGGCGAGAAACGCCGGCCACCG
TACAGGTGGTTTTTGGTTGGGCCTCGACGGAGTGGTACGAGTTTGCATAT
CGACCCACTGGGAACGTCAGCCTGGAACACGGTGCTGACAGGCAAAAAAC
GCTGGATCTTGTTTCCTCCCTCCACGCCTCGGGACTTGGCCAAAGGCAAG
GCGTTGTATCGAAAGGGGGAGGATGATGAGCCCATTAATTATTTTGCGGA
TATTTTGCCGCGGTTGCGGGCGTTGCCGGCGAGTGAGGAGTTGGTTTTTT
ATGAGTTCATTCAGGAGGAGGGGGAGACGGTTTTCGTGCCCGGCGGATGG
TGGCATGCGGTGCTCAACCTAGAAGATTCCGTGGCCGTCACACAAAATTT
TGCGAGTCGCGTGAATTTCTCTGCAGTATGGCGAAAGACAAGAACGGGGA
GGAAGAAGATGGCTTGTCGGTGGTTGAAGAGATTGGAAGAGGTCTTCCCT
GAGCTGGCGGCAACAGCAAAGAAGTTGAATGAGGTGGATGGGTTTCGGAT
GCAATCGAAGAAGGAGAGGGAGGAGGCGAAGAGGAAGAAGGAGTGGGAAA
AGAAACGGCGGAGGAAGGAGAAGGAGGAAGAGAAGGAGAAGGCGAAGGAG
AAGAAGAGGGACCGTCGTGCAGGGTCGGATTCATCGTCGTCCTCGTCTTC
GTCTTCCTCCACTTCCTCCTCCTTTTCCTCCTCCTGCTCATTCGCATCAG
CGACGACCGTGGCAGCCGTGAGAGAAATGGCGGAAAAACGCAAGGGCGGG
TATGAAGAGAGGGATGTGGATGTGTCAAAGCGTGCGCGTGAGACGAACTG
AAGAGAATTAGATGTTTTTCACCAAATTGAGAGAGCGATTGCTACTGGTG
CTGTTGGTGCTGCTGGTACTGCCGACGCTGCTGTTTCCGGTAGCAATGCG
GCTGTTTCTGCAGGAAATGATAAGAGGTTGCTGTCACAGCACGAAATGAT
TAGAAATCTGGGGACGAAAGAGAGATGTCCAGTGGTGGAAATGTCCGGAC
GATAAGAGAGACCCCGACACATGGAGATCGTCTGAATTTCGGGAAGGAAA
AGGGAGTGAGAGGTGGAGAGATGGAGGGTGGGAAGAATAGCGCTACAAGA
TTTTGAAAACAAATTAGAGATTGATACACGCACATGTGTATCAGTCTAAA
ATGATGATAGATACACTCATACAAGTATTGATCTAAAAATAATATAAATA
CGGGTGGGTACACAAACGACGACAAAAATAAAAAATTAATATTAGCATCA
GGAGCAAAACCAATATCACCACCACCATCAAC
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protein sequence of NO07G01110.1

>NO07G01110.1-protein ID=NO07G01110.1-protein|Name=NO07G01110.1|organism=Nannochloropsis oceanica|type=polypeptide|length=453bp
MGWRRRLEEAKQKHRPRLKDWGRDAFATDRKLDFVALNYLPSPHSQHDKP
QQHKTGMVDRMHCRDLSPEAFIDQYEKLSKPVIIQGVPEAEGWKATDRWA
SDGALRRRFRKYSFKCGEDDDGRSIRVRLKHFLKYVGKQKDDSPLYIFDS
TFDDDKEAKALLDDYAVPSYFPDDFFSLVGEKRRPPYRWFLVGPRRSGTS
LHIDPLGTSAWNTVLTGKKRWILFPPSTPRDLAKGKALYRKGEDDEPINY
FADILPRLRALPASEELVFYEFIQEEGETVFVPGGWWHAVLNLEDSVAVT
QNFASRVNFSAVWRKTRTGRKKMACRWLKRLEEVFPELAATAKKLNEVDG
FRMQSKKEREEAKRKKEWEKKRRRKEKEEEKEKAKEKKRDRRAGSDSSSS
SSSSSSTSSSFSSSCSFASATTVAAVREMAEKRKGGYEERDVDVSKRARE
TN*
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mRNA from alignment at chr7:367759..369794-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO07G01110.1 ID=NO07G01110.1|Name=NO07G01110.1|organism=Nannochloropsis oceanica|type=mRNA|length=2036bp|location=Sequence derived from alignment at chr7:367759..369794- (Nannochloropsis oceanica)
ACGACAGAATTTCACCACATTTCACAGGTCTCTATCACTGCTATGGGTTG
GCGACGCCGACTCGAGGAAGCCAAGCAAAAACACAGGCCCCGGCTCAAGG
ACTGGGGCCGAGATGCGTTTGCAACTGATCGCAAGCTGGACTTTGTGGCC
CTGAATTACCTGCCTTCCCCTCACAGCCAGCACGATAAGCCTCAACAGCA
TAAAACAGGGATGGTGGACCGAATGCACTGTCGCGACCTGAGCCCGGAGG
CGTTTATTGATCAGTACGAGAAGCTGAGCAAGCCAGTGATCATCCAGGGT
GTGCCCGAGGCAGAGGGGTGGAAGGCCACGGATCGTTGGGCCTCGGACGG
CGCGCTGCGTCGACGCTTTCGCAAGTACTCGTTCAAGTGTGGAGAGGATG
ATGACGGACGGTCGATTCGAGTGCGACTGAAGCATTTTTTAAAGTACGTG
GGCAAGCAGAAGGATGACTCCCCGCTTTACATCTTCGATTCCACCTTTGA
CGACGACAAGGAAGCGAAGGCCTTACTGGACGACTACGCTGTGCCCTCCT
ACTTTCCCGATGACTTCTTTTCACTTGTGGGCGAGAAACGCCGGCCACCG
TACAGGTGGTTTTTGGTTGGGCCTCGACGGAGTGGTACGAGTTTGCATAT
CGACCCACTGGGAACGTCAGCCTGGAACACGGTGCTGACAGGCAAAAAAC
GCTGGATCTTGTTTCCTCCCTCCACGCCTCGGGACTTGGCCAAAGGCAAG
GCGTTGTATCGAAAGGGGGAGGATGATGAGCCCATTAATTATTTTGCGGA
TATTTTGCCGCGGTTGCGGGCGTTGCCGGCGAGTGAGGAGTTGGTTTTTT
ATGAGTTCATTCAGGAGGAGGGGGAGACGGTTTTCGTGCCCGGCGGATGG
TGGCATGGTAAGTACCTTTGAATAACGATGTTTGTTTTCATTTAGCTTTT
GGTGAAACGTACATCGACATCTCTGCTCGATACATGCACTTATTTTTTTT
TACACTTATTCTTATCCTCCCTTCCTCCCTCCGTCCCTCCCTCCGTCCCT
CCCTCACAAAGCGGTGCTCAACCTAGAAGATTCCGTGGCCGTCACACAAA
ATTTTGCGAGTCGCGTGAATTTCTCTGCAGTATGGCGAAAGACAAGAACG
GGGAGGAAGAAGATGGCTTGTCGGTGGTTGAAGAGATTGGAAGAGGTCTT
CCCTGAGCTGGCGGCAACAGCAAAGAAGTTGAATGAGGTGGATGGGTTTC
GGATGCAATCGAAGAAGGAGAGGGAGGAGGCGAAGAGGAAGAAGGAGTGG
GAAAAGAAACGGCGGAGGAAGGAGAAGGAGGAAGAGAAGGAGAAGGCGAA
GGAGAAGAAGAGGGACCGTCGTGCAGGGTCGGATTCATCGTCGTCCTCGT
CTTCGTCTTCCTCCACTTCCTCCTCCTTTTCCTCCTCCTGCTCATTCGCA
TCAGCGACGACCGTGGCAGCCGTGAGAGAAATGGCGGAAAAACGCAAGGG
CGGGTATGAAGAGAGGGATGTGGATGTGTCAAAGCGTGCGCGTGAGACGA
ACTGAAGAGAATTAGATGTTTTTCACCAAATTGAGAGAGCGATTGCTACT
GGTGCTGTTGGTGCTGCTGGTACTGCCGACGCTGCTGTTTCCGGTAGCAA
TGCGGCTGTTTCTGCAGGAAATGATAAGAGGTTGCTGTCACAGCACGAAA
TGATTAGAAATCTGGGGACGAAAGAGAGATGTCCAGTGGTGGAAATGTCC
GGACGATAAGAGAGACCCCGACACATGGAGATCGTCTGAATTTCGGGAAG
GAAAAGGGAGTGAGAGGTGGAGAGATGGAGGGTGGGAAGAATAGCGCTAC
AAGATTTTGAAAACAAATTAGAGATTGATACACGCACATGTGTATCAGTC
TAAAATGATGATAGATACACTCATACAAGTATTGATCTAAAAATAATATA
AATACGGGTGGGTACACAAACGACGACAAAAATAAAAAATTAATATTAGC
ATCAGGAGCAAAACCAATATCACCACCACCATCAAC
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Coding sequence (CDS) from alignment at chr7:367759..369794-

>NO07G01110.1 ID=NO07G01110.1|Name=NO07G01110.1|organism=Nannochloropsis oceanica|type=CDS|length=1359bp|location=Sequence derived from alignment at chr7:367759..369794- (Nannochloropsis oceanica)
ATGGGTTGGCGACGCCGACTCGAGGAAGCCAAGCAAAAACACAGGCCCCG
GCTCAAGGACTGGGGCCGAGATGCGTTTGCAACTGATCGCAAGCTGGACT
TTGTGGCCCTGAATTACCTGCCTTCCCCTCACAGCCAGCACGATAAGCCT
CAACAGCATAAAACAGGGATGGTGGACCGAATGCACTGTCGCGACCTGAG
CCCGGAGGCGTTTATTGATCAGTACGAGAAGCTGAGCAAGCCAGTGATCA
TCCAGGGTGTGCCCGAGGCAGAGGGGTGGAAGGCCACGGATCGTTGGGCC
TCGGACGGCGCGCTGCGTCGACGCTTTCGCAAGTACTCGTTCAAGTGTGG
AGAGGATGATGACGGACGGTCGATTCGAGTGCGACTGAAGCATTTTTTAA
AGTACGTGGGCAAGCAGAAGGATGACTCCCCGCTTTACATCTTCGATTCC
ACCTTTGACGACGACAAGGAAGCGAAGGCCTTACTGGACGACTACGCTGT
GCCCTCCTACTTTCCCGATGACTTCTTTTCACTTGTGGGCGAGAAACGCC
GGCCACCGTACAGGTGGTTTTTGGTTGGGCCTCGACGGAGTGGTACGAGT
TTGCATATCGACCCACTGGGAACGTCAGCCTGGAACACGGTGCTGACAGG
CAAAAAACGCTGGATCTTGTTTCCTCCCTCCACGCCTCGGGACTTGGCCA
AAGGCAAGGCGTTGTATCGAAAGGGGGAGGATGATGAGCCCATTAATTAT
TTTGCGGATATTTTGCCGCGGTTGCGGGCGTTGCCGGCGAGTGAGGAGTT
GGTTTTTTATGAGTTCATTCAGGAGGAGGGGGAGACGGTTTTCGTGCCCG
GCGGATGGTGGCATGCGGTGCTCAACCTAGAAGATTCCGTGGCCGTCACA
CAAAATTTTGCGAGTCGCGTGAATTTCTCTGCAGTATGGCGAAAGACAAG
AACGGGGAGGAAGAAGATGGCTTGTCGGTGGTTGAAGAGATTGGAAGAGG
TCTTCCCTGAGCTGGCGGCAACAGCAAAGAAGTTGAATGAGGTGGATGGG
TTTCGGATGCAATCGAAGAAGGAGAGGGAGGAGGCGAAGAGGAAGAAGGA
GTGGGAAAAGAAACGGCGGAGGAAGGAGAAGGAGGAAGAGAAGGAGAAGG
CGAAGGAGAAGAAGAGGGACCGTCGTGCAGGGTCGGATTCATCGTCGTCC
TCGTCTTCGTCTTCCTCCACTTCCTCCTCCTTTTCCTCCTCCTGCTCATT
CGCATCAGCGACGACCGTGGCAGCCGTGAGAGAAATGGCGGAAAAACGCA
AGGGCGGGTATGAAGAGAGGGATGTGGATGTGTCAAAGCGTGCGCGTGAG
ACGAACTGA
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Synonyms
Publications