NO07G00560.1, NO07G00560.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO07G00560.1
Unique Name	NO07G00560.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	3238
Alignment location	chr7:207635..212339 -

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr7	genome	chr7:207635..212339 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO07G00560.1 vs.
Match: XP_009038899.1 (hypothetical protein AURANDRAFT_72012 [Aureococcus anophagefferens]; EGB06320.1 hypothetical protein AURANDRAFT_72012 [Aureococcus anophagefferens])

HSP 1 Score: 553.1 bits (1424), Expect = 1.100e-153
Identity = 294/567 (51.85%), Postives = 402/567 (70.90%), Query Frame = 0

Query:   89 APSARRTRGHVQAMAKVTPKLIYYRDETAQKLIAGINTVANVVKATLGPRGRNVVLMRDVGYPEVINDGVTIARDINLPDPAMQVGAKLIKAVASKSDSIAGDGTTTSTLMTQVLINKGYKMIMAGANAIGVWRGMKKASDILLGKLKTLARPISSSEDIHNIATIA-SGSAVMGAIIAKGFERVGVNGQVVIEESPTMLDEIDFTEGMNYDNGFVDSGFITDTGRACAELEKPYVLVTNHVISNLREMVTLLETFANSERQLLIIAEDIKGEAREALVMNKERGSLKVAAMKGPGFGVFRQDYYTDIAIATGATFVAKETGIGLEKVTLDMLGQATKAILRQESATLLLTGKHKDAVNARIASIRESMDDLDSMFDKEKSEERIASLAGGVARIRVGAATEVELKDKKLRYEDAVNSVKNSLKYGVLPGGGTTLLYLKRYRDEVVKTLKADGLDDEVFGADILFDALSEPMRQIAENAGKHGNFIVSKCVDREFGYGFNAATLTFENLLEAGVLDAATVTENSLANSVSVASLVLTSGGMVVEDEAGMRRLEREKIMDYAKAGGGM 655
            APSA   +    A  K+  K + + D +  +L+AGIN VA+ VK TLGP+GRNVVL R  G PE++NDGVTIARDI L DPAM +GAKLI+ VASKSDS AGDGTTTSTL+TQ L+N+G K + +G N + + RGM KA+D L+ ++  LA+P+ S++++ NIAT+A SG+AVMGAIIAK FE+VG  G   +EES T+ DE++FTEG+  D G+V   F+ D  R   E+  P +LVT+  I N+ +++ LLE    ++ +L+IIAED+ GEA  ALV+NK RG L V A+K PGFG  R+D   DIAIATGAT+VA+E G+ L+ VT +MLG   + ++ +E  T++  GK  DA+  RIA I+   ++ DSMFDKEK+EER+A+L GG+ARI+VGAATE ELKDKKLRYEDA+N+VK++LK G+LPGGG+TL YL R RD +   +     +DE  GADI+F++L+ P+ QIA+NAG  G  ++SK   + FG+G+NAAT  + +L EAGV+D+A VT ++L NS S+A LVLT+  ++ E    M  +++   MD A   GGM
Sbjct:   17 APSAPAPK----ATTKLEAKKVLFGDASRAQLVAGINAVADAVKVTLGPKGRNVVLERAYGAPEIVNDGVTIARDIELDDPAMNIGAKLIQEVASKSDSKAGDGTTTSTLLTQELVNQGMKAVSSGVNPVALRRGMSKATDALIVEVTALAKPVDSNDELLNIATVATSGNAVMGAIIAKAFEKVGDTGSTTMEESQTLTDEVEFTEGLTIDRGYVSPYFVNDQERQLCEMLDPKILVTDQKIENVNDLIPLLEACVKTKERLVIIAEDVVGEALSALVVNKMRGVLDVVAIKAPGFGTRRKDLLQDIAIATGATYVAQEVGVALDTVTPEMLGTCERIVVGKEETTIITDGKQADAMEKRIAQIKLEAENTDSMFDKEKAEERVAALGGGIARIKVGAATETELKDKKLRYEDALNAVKSALKMGILPGGGSTLSYLLRKRDAIAGAMDD---EDERRGADIVFNSLAAPVCQIAKNAGLEGQVVLSKVEGKPFGFGYNAATGEYCDLFEAGVVDSAQVTLSALENSASIAGLVLTTEALIHEIPVEMSEMDKLAAMDGAAGMGGM 576

The following BLAST results are available for this feature:

BLAST of NO07G00560.1 vs.

BLAST of NO07G00560.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
XP_009038899.1	1.100e-153	51.85	hypothetical protein AURANDRAFT_72012 [Aureococcus...	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO07G00560	NO07G00560	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO07G00560.1	NO07G00560.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO07G00560.1.cds1	NO07G00560.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO07G00560.1.cds2	NO07G00560.1.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO07G00560.1.cds3	NO07G00560.1.cds3	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO07G00560.1.cds4	NO07G00560.1.cds4	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO07G00560.1.cds5	NO07G00560.1.cds5	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO07G00560.1.cds6	NO07G00560.1.cds6	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO07G00560.1.cds7	NO07G00560.1.cds7	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO07G00560.1.cds8	NO07G00560.1.cds8	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO07G00560.1.cds9	NO07G00560.1.cds9	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr7:207635..212339-
coding sequence from alignment at chr7:207635..212339-

mRNA sequence

>NO07G00560.1 ID=NO07G00560.1|Name=NO07G00560.1|organism=Nannochloropsis oceanica|type=mRNA|length=3238bp
TGAGAGAAAGTCGTTGATTGAATATAACATTTCTGTAGTCATCGTTTTCG
CTCATCACCTAGTTTGAATGCCCTAATTCTAATCTACACTTACCCCTTTC
TCATAACCTACAAAGTACTCTACACGTGGTCTTCCGGCCCCCCTCGGCCC
TTCCTCCCTACCTCCCCCCTCCCCGCCGCTAATTCCTCAATCAGCAAGAT
TCCCTTTCCTCCGCCCCTCCCTCCCATCTCCATCCCATCTCTCATCCTCT
TCAAATCCTCCTCCGCTGCCTCCTTGTCCTTCTCCGACATATTATCGACA
ATATACTGGAACCTCGAGTCAGTTATCCCCAATAACCCTGCCACCCCCGC
CCCCACATAATCCACCCCATCAAGGCACTTCTCACTTGCCCACTTAGCGC
GAAACAACAAGCCAGGGAGGGTCAGGAGTGGTGGTGCTTGCTCTTTTTGA
GAAGGGGGAGATGGAGAAGGAGCGTGACGCCCTCCCCTCCCCCCCCCTTC
CCCATCATCGAGGGCATGCGCGGACGTGGAGTGAGGTTGGGGAAAGTGCT
GCTGCTGCTGTTGTTGTTGTTGTTGTGGATCCTCTTCTTGCGTACGATCC
ACATCCAGCAAACGAGTGGGCGGCAGGGAACGGGAAGGAGGAGGAGGCGA
GGCCATGATGCGGCAGGGACTGTGCATATGCAAAAGTGAGGTTCCACCGC
ATAGTTAGCTCGCTTGCGCATAACTCTCACGAAGGCAAGGCCTCCATTGG
ATGAGGCTTCTCACCTTCATAGTGACTGTGGCTGTGTCTGTGGGATGTGC
TATGTGAAACGCTTGCGATACTCGGACGAAAGCTTGGAAAGGAAGACCTG
TTCACCCACGTCGTGCGGTCGCGGGCTTCTTCGATGAGATCAAGTTGCCG
TTCTTGTCCCGAGCATTTTGGTGCCCTGTCTATCCGACCAATAGATGCAC
GCACGCAATCCCACCTAGACAAGCACCAATCTTTTCGTTTATGCCCAGGC
TGGTGGTAGAGTGGTTGCTGGTGCAGCTTTCTTGCGAAGCCTTCCGCTTG
CAAAAGGATTTTACCCACCCCCACACACGCACACGTCTCCTTGCTTGCTT
GCCTTCCACTCAAACATCAATGCCTCTTGGAAACACTACAGCCTGCCATC
CCTTGGGCACACTCTAATTTTGAGTCGACGACGACAACTACGACGACGTG
AAGTAGCCATGCGCCGGCCACGGCAACGCGTACAGCAACCGCAAGGCGAT
AATGACCCATGGCAGCAGCAGCAGCTGCTGCAGCAGCGTCCGACCCTCCC
CTCCTCCTGCTCCTTCCTTCTTGTCCTTCTCCTAGTCAGCGCCCTCCTTT
CCATGGCCCTACCAATAGCTGCACGCCCCCCTACCTTTGTAGCAGAAGCA
GCAGCAAAAACAGCAGGAAGGAGAAAATCATGTGGCTTCCTCCCCGTCGT
GCCCCTCGCAGGCCTTTCTGGCGCACCCTCCGCCCGTCGCACCCGCGGCC
ATGTCCAAGCCATGGCAAAAGTCACCCCCAAATTAATCTACTATCGCGAC
GAGACCGCGCAAAAACTTATAGCAGGTATCAATACCGTCGCAAACGTCGT
CAAAGCCACGCTTGGCCCCCGCGGGCGAAATGTGGTGCTAATGCGTGATG
TTGGATACCCGGAGGTAATCAATGACGGAGTGACGATCGCCCGAGACATT
AATTTACCGGACCCGGCTATGCAAGTCGGTGCAAAGCTAATCAAGGCCGT
GGCGAGTAAAAGTGACTCGATTGCTGGAGACGGGACAACCACTTCCACGC
TCATGACCCAAGTGTTGATTAATAAGGGCTACAAGATGATCATGGCTGGC
GCCAACGCCATTGGCGTGTGGAGGGGTATGAAGAAAGCCAGTGATATTTT
ATTAGGCAAATTGAAAACTTTGGCACGGCCAATCAGTAGTTCCGAAGATA
TTCACAATATTGCCACCATTGCGAGTGGGTCAGCTGTAATGGGCGCCATT
ATTGCGAAGGGTTTTGAGCGTGTGGGGGTGAATGGACAAGTGGTTATTGA
AGAGTCCCCTACCATGCTAGACGAGATCGATTTCACGGAGGGCATGAACT
ACGACAACGGTTTCGTCGACTCGGGCTTTATCACCGATACAGGCCGCGCC
TGTGCGGAGCTGGAAAAGCCTTACGTGTTGGTAACGAACCACGTGATTTC
CAACCTCCGCGAGATGGTGACCCTCCTAGAGACTTTCGCCAATTCGGAAC
GACAACTCCTCATCATTGCGGAAGACATCAAGGGAGAGGCGCGTGAAGCT
TTGGTTATGAACAAGGAGCGGGGTTCTCTCAAGGTGGCTGCAATGAAAGG
CCCTGGATTTGGTGTGTTCCGTCAAGACTACTACACGGACATTGCGATCG
CCACCGGCGCCACCTTCGTGGCCAAGGAAACTGGAATCGGGCTTGAAAAA
GTGACATTGGATATGCTCGGGCAAGCCACTAAGGCCATCCTGAGGCAAGA
AAGTGCCACGCTCCTCCTGACGGGCAAGCACAAGGATGCGGTCAACGCCC
GCATTGCCTCCATTCGTGAATCGATGGATGACTTGGACTCCATGTTTGAC
AAAGAAAAATCAGAGGAACGGATCGCGTCTCTTGCCGGCGGCGTAGCACG
GATACGCGTCGGTGCAGCGACAGAAGTGGAGCTGAAGGACAAAAAACTAA
GGTACGAGGACGCTGTCAACTCCGTCAAGAACTCGCTCAAGTATGGAGTC
CTCCCCGGGGGTGGCACCACCCTTCTGTACTTGAAGCGCTACCGGGACGA
GGTAGTGAAGACATTGAAAGCGGATGGCCTGGACGACGAGGTCTTTGGCG
CCGACATCTTATTTGATGCCCTGTCGGAGCCCATGAGGCAAATCGCGGAG
AACGCAGGGAAACACGGAAACTTCATCGTCTCGAAGTGTGTGGACCGCGA
GTTCGGGTACGGGTTTAATGCGGCGACCCTCACCTTTGAAAACCTGCTCG
AGGCCGGGGTGTTGGATGCGGCCACCGTGACAGAGAACAGTCTGGCCAAT
TCTGTGAGTGTTGCCAGCTTGGTGTTGACGAGTGGGGGGATGGTAGTGGA
GGACGAGGCGGGCATGCGCAGGTTGGAACGGGAGAAGATCATGGACTACG
CCAAGGCGGGAGGAGGGATGATGTAGGGAGTGTTTTTCCGTATGCAGCCT
TTTTTTCCTTCATTGATAGGCGAAAAGCGTGCTTGCGT

protein sequence of NO07G00560.1

>NO07G00560.1-protein ID=NO07G00560.1-protein|Name=NO07G00560.1|organism=Nannochloropsis oceanica|type=polypeptide|length=656bp
MRRPRQRVQQPQGDNDPWQQQQLLQQRPTLPSSCSFLLVLLLVSALLSMA
LPIAARPPTFVAEAAAKTAGRRKSCGFLPVVPLAGLSGAPSARRTRGHVQ
AMAKVTPKLIYYRDETAQKLIAGINTVANVVKATLGPRGRNVVLMRDVGY
PEVINDGVTIARDINLPDPAMQVGAKLIKAVASKSDSIAGDGTTTSTLMT
QVLINKGYKMIMAGANAIGVWRGMKKASDILLGKLKTLARPISSSEDIHN
IATIASGSAVMGAIIAKGFERVGVNGQVVIEESPTMLDEIDFTEGMNYDN
GFVDSGFITDTGRACAELEKPYVLVTNHVISNLREMVTLLETFANSERQL
LIIAEDIKGEAREALVMNKERGSLKVAAMKGPGFGVFRQDYYTDIAIATG
ATFVAKETGIGLEKVTLDMLGQATKAILRQESATLLLTGKHKDAVNARIA
SIRESMDDLDSMFDKEKSEERIASLAGGVARIRVGAATEVELKDKKLRYE
DAVNSVKNSLKYGVLPGGGTTLLYLKRYRDEVVKTLKADGLDDEVFGADI
LFDALSEPMRQIAENAGKHGNFIVSKCVDREFGYGFNAATLTFENLLEAG
VLDAATVTENSLANSVSVASLVLTSGGMVVEDEAGMRRLEREKIMDYAKA
GGGMM*

mRNA from alignment at chr7:207635..212339-

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO07G00560.1 ID=NO07G00560.1|Name=NO07G00560.1|organism=Nannochloropsis oceanica|type=mRNA|length=4705bp|location=Sequence derived from alignment at chr7:207635..212339- (Nannochloropsis oceanica)
TGAGAGAAAGTCGTTGATTGAATATAACATTTCTGTAGTCATCGTTTTCG
CTCATCACCTAGTTTGAATGCCCTAATTCTAATCTACACTTACCCCTTTC
TCATAACCTACAAAGTACTCTACACGTGGTCTTCCGGCCCCCCTCGGCCC
TTCCTCCCTACCTCCCCCCTCCCCGCCGCTAATTCCTCAATCAGCAAGAT
TCCCTTTCCTCCGCCCCTCCCTCCCATCTCCATCCCATCTCTCATCCTCT
TCAAATCCTCCTCCGCTGCCTCCTTGTCCTTCTCCGACATATTATCGACA
ATATACTGGAACCTCGAGTCAGTTATCCCCAATAACCCTGCCACCCCCGC
CCCCACATAATCCACCCCATCAAGGCACTTCTCACTTGCCCACTTAGCGC
GAAACAACAAGCCAGGGAGGGTCAGGAGTGGTGGTGCTTGCTCTTTTTGA
GAAGGGGGAGATGGAGAAGGAGCGTGACGCCCTCCCCTCCCCCCCCCTTC
CCCATCATCGAGGGCATGCGCGGACGTGGAGTGAGGTTGGGGAAAGTGCT
GCTGCTGCTGTTGTTGTTGTTGTTGTGGATCCTCTTCTTGCGTACGATCC
ACATCCAGCAAACGAGTGGGCGGCAGGGAACGGGAAGGAGGAGGAGGCGA
GGCCATGATGCGGCAGGGACTGTGCATATGCAAAAGTGAGGTTCCACCGC
ATAGTTAGCTCGCTTGCGCATAACTCTCACGAAGGCAAGGCCTCCATTGG
ATGAGGCTTCTCACCTTCATAGTGACTGTGGCTGTGTCTGTGGGATGTGC
TATGTGAAACGCTTGCGATACTCGGACGAAAGCTTGGAAAGGAAGACCTG
TTCACCCACGTCGTGCGGTCGCGGGCTTCTTCGATGAGATCAAGTTGCCG
TTCTTGTCCCGAGCATTTTGGTGCCCTGTCTATCCGACCAATAGATGCAC
GCACGCAATCCCACCTAGACAAGCACCAATCTTTTCGTTTATGCCCAGGC
TGGTGGTAGAGTGGTTGCTGGTGCAGCTTTCTTGCGAAGCCTTCCGCTTG
CAAAAGGATTTTACCCACCCCCACACACGCACACGTCTCCTTGCTTGCTT
GCCTTCCACTCAAACATCAATGCCTCTTGGAAACACTACAGCCTGCCATC
CCTTGGGCACACTCTAATTTTGAGTCGACGACGACAACTACGACGACGTG
AAGTAGCCATGCGCCGGCCACGGCAACGCGTACAGCAACCGCAAGGCGAT
AATGACCCATGGCAGCAGCAGCAGCTGCTGCAGCAGCGTCCGACCCTCCC
CTCCTCCTGCTCCTTCCTTCTTGTCCTTCTCCTAGTCAGCGCCCTCCTTT
CCATGGCCCTACCAATAGCTGCACGCCCCCCTACCTTTGTAGCAGAAGCA
GCAGCAAAAACAGCAGGAAGGAGAAAATCATGTGGCTTCCTCCCCGTCGT
GCCCCTCGCAGGCCTTTCTGGCGGTGAGTCGTGTGCCTGCACTGGCCGTG
CGACTCAAAATATTTACCTATCTGCGCTGATGTTTCCTTCATCCTCTCCT
TCATTTTTATCCTTTTCGTACGTGACTTTTGCGCGACTCGCATAAACTCA
CCTATTCCTCCCTCCCTCGCCTCACTCCCCAGCACCCTCCGCCCGTCGCA
CCCGCGGCCATGTCCAAGCCATGGCAAAAGTCACCCCCAAATTAATCTAC
TATCGCGACGAGACCGCGCAAAAACTTATAGCAGGTATCAATACCGTCGC
AAACGTCGTCAAAGCCACGCTTGGCCCCCGCGGGCGAAATGTGGTGCTAA
TGCGTGATGTTGGATACCCGGAGGTAATCAATGACGGAGTGACGATCGCC
CGAGACATTAATTTACCGGACCCGGCTATGCAAGTCGGTGCAAAGCTAAT
CAAGGCCGTGGCGAGTAAAAGTGACTCGATTGCTGGAGACGGGACAACCA
CTTCCACGCTCATGACCCAAGTGTTGATTAATAAGGTACGTCCTCCTTCC
TGCCCTCCCTCCCTCTTTTCCTCCCTCCCTCTCACCATCGGTGCTTGTAT
ATGTTTTATTTGTCCCACGAGTGAACTGTGTAAAGCGAAGAACGTTTACA
AAGCCTGATCCATCTAACTCTTCCTTCTTCCCTCTTCCCTCTTCTCCCTC
TCTTTAGGGCTACAAGATGATCATGGCTGGCGCCAACGCCATTGGCGTGT
GGAGGGGTATGAAGAAAGCCAGTGATATTTTATTAGGCAAATTGAAAACT
TTGGCACGGCCAATCAGTAGTTCCGAAGATATTCACAATATTGGTGAGAA
AACGAAGAGAGGGAGGGAGGAGGGAGGGAGCGAAGGGGGCATGACATCAT
GAAGAAAGGGATTAAGGGACAACTTACTCATGTAACCCTCCCGCCCTCCG
TCGCTTTCTTTTTTAAGCCACCATTGCGAGTGGGTCAGCTGTAATGGGCG
CCATTATTGCGAAGGGTTTTGAGCGTGTGGGGGTGAATGGACAAGTAAGT
ACGCATTTGTATCATATATTCTCTTATTGATTTTTTAGATTATAAAGCCA
ACTAGTGATTCATTCGCTAATTTTTTTATCGTATAGTTTAATTATTTTAT
TTATTCATTTATATAAATATATATTTATTACTCTGCCCATTCCAATCACC
CGACGACACCAGGTGGTTATTGAAGAGTCCCCTACCATGCTAGACGAGAT
CGATTTCACGGAGGGCATGAACTACGACAACGGTTTCGTCGACTCGGGCT
TTATCACCGATACAGGTGAGGAGGGAGAAGGAAAGGGGGGGAGGGAGGGA
GGGAGGGAGGGAGGGAGGGAGGGCATGTGAATTGGAGGGGAAACAGCCAC
TTACATCTTGACCTACATCTTCGTGAGACGGGATTTATTTGTGGACCCTG
ATGTACAGGTCTCCTGCCCCTCCTGAACGGGTTTCACCCTCCTCCGCACT
CACTCTATGCCATGTTTTTGTAATGTCGATTTTATTCGTTCCCAGGCCGC
GCCTGTGCGGAGCTGGAAAAGCCTTACGTGTTGGTAACGAACCACGTGAT
TTCCAACCTCCGCGAGATGGTGACCCTCCTAGAGACTTTCGCCAATTCGG
AACGACAACTCCTCATCATTGCGGAAGACATCAAGGGAGAGGCGCGTGAA
GCTTTGGTTATGAACAAGGAGCGGGGTTCTCTCAAGGTGGCTGCAATGAA
AGGCCCTGGATTTGGTGGTACGTCCCTCCCTCCTCCTCTCCCTCCCTCCT
TCCCTCCCTCCTTCCCTCATTCCCTCCTTCCCTCCCTGCGTATTTGTGTC
GTTGATATCAAAGAGAAAGAAAAAGGAAAAGGGGGGGCGCTCCCTTTTCC
ATTTTGGCGTCCGTGTGACTTTGCCGGGATTTAAATAAATGAATGAATAA
TCAATCAATCAACAGATTCACATGATGGATGAATCAAAAAGGTAATTTAA
GTCATCACACTCATCTTCCCGTCTTCCCCACCACTCACACACACACACAC
ACACCATATCATACAGTGTTCCGTCAAGACTACTACACGGACATTGCGAT
CGCCACCGGCGCCACCTTCGTGGCCAAGGAAACTGGAATCGGGCTTGAAA
AAGTGACATTGGATATGCTCGGGCAAGCCACTAAGGCCATCCTGAGGTAC
GTCCCTCCCTTCCTTCCTCCCTCCCTCCCAACTTGAGTCAAGAAATAATA
CCTTAAGAAAAAATATCAGGTCTTCGATACAAGACAGGCCACGCGAATGC
TTGAGCCACTCACCGCTCCTCCCTCCCTCCCTTCCTCCCTCCCTCAATTC
CTCTTTCTTCCACCCATCCAGGCAAGAAAGTGCCACGCTCCTCCTGACGG
GCAAGCACAAGGATGCGGTCAACGCCCGCATTGCCTCCATTCGTGAATCG
ATGGATGACTTGGACTCCATGTTTGACAAAGAAAAATCAGAGGAACGGAT
CGCGTCTCTTGCCGGCGGCGTAGCACGGATACGCGTCGGTGCAGCGACAG
AAGTGGAGCTGAAGGACAAAAAACTAAGGTAAGCCTTTTCTTTTGTATCC
AACCCTCCAAGGAGAGCCTGTCATTCCAAAACCCCATTTCAACAATACTA
TTTCTGAACGTCATCATCTCTTCCTCCTCCTCCTCCTCCTCCTCCTCCTC
CTCCTCCTCCAACACCAGGTACGAGGACGCTGTCAACTCCGTCAAGAACT
CGCTCAAGTATGGAGTCCTCCCCGGGGGTGGCACCACCCTTCTGTACTTG
AAGCGCTACCGGGACGAGGTAGTGAAGACATTGAAAGCGGATGGCCTGGA
CGACGAGGTCTTTGGCGCCGACATCTTATTTGATGCCCTGTCGGAGCCCA
TGAGGCAAATCGCGGAGAACGCAGGGAAACACGGAAACTTCATCGTCTCG
AAGTGTGTGGACCGCGAGTTCGGGTACGGGTTTAATGCGGCGACCCTCAC
CTTTGAAAACCTGCTCGAGGCCGGGGTGTTGGATGCGGCCACCGTGACAG
AGAACAGTCTGGCCAATTCTGTGAGTGTTGCCAGCTTGGTGTTGACGAGT
GGGGGGATGGTAGTGGAGGACGAGGCGGGCATGCGCAGGTTGGAACGGGA
GAAGATCATGGACTACGCCAAGGCGGGAGGAGGGATGATGTAGGGAGTGT
TTTTCCGTATGCAGCCTTTTTTTCCTTCATTGATAGGCGAAAAGCGTGCT
TGCGT

Coding sequence (CDS) from alignment at chr7:207635..212339-

>NO07G00560.1 ID=NO07G00560.1|Name=NO07G00560.1|organism=Nannochloropsis oceanica|type=CDS|length=1968bp|location=Sequence derived from alignment at chr7:207635..212339- (Nannochloropsis oceanica)
ATGCGCCGGCCACGGCAACGCGTACAGCAACCGCAAGGCGATAATGACCC
ATGGCAGCAGCAGCAGCTGCTGCAGCAGCGTCCGACCCTCCCCTCCTCCT
GCTCCTTCCTTCTTGTCCTTCTCCTAGTCAGCGCCCTCCTTTCCATGGCC
CTACCAATAGCTGCACGCCCCCCTACCTTTGTAGCAGAAGCAGCAGCAAA
AACAGCAGGAAGGAGAAAATCATGTGGCTTCCTCCCCGTCGTGCCCCTCG
CAGGCCTTTCTGGCGCACCCTCCGCCCGTCGCACCCGCGGCCATGTCCAA
GCCATGGCAAAAGTCACCCCCAAATTAATCTACTATCGCGACGAGACCGC
GCAAAAACTTATAGCAGGTATCAATACCGTCGCAAACGTCGTCAAAGCCA
CGCTTGGCCCCCGCGGGCGAAATGTGGTGCTAATGCGTGATGTTGGATAC
CCGGAGGTAATCAATGACGGAGTGACGATCGCCCGAGACATTAATTTACC
GGACCCGGCTATGCAAGTCGGTGCAAAGCTAATCAAGGCCGTGGCGAGTA
AAAGTGACTCGATTGCTGGAGACGGGACAACCACTTCCACGCTCATGACC
CAAGTGTTGATTAATAAGGGCTACAAGATGATCATGGCTGGCGCCAACGC
CATTGGCGTGTGGAGGGGTATGAAGAAAGCCAGTGATATTTTATTAGGCA
AATTGAAAACTTTGGCACGGCCAATCAGTAGTTCCGAAGATATTCACAAT
ATTGCCACCATTGCGAGTGGGTCAGCTGTAATGGGCGCCATTATTGCGAA
GGGTTTTGAGCGTGTGGGGGTGAATGGACAAGTGGTTATTGAAGAGTCCC
CTACCATGCTAGACGAGATCGATTTCACGGAGGGCATGAACTACGACAAC
GGTTTCGTCGACTCGGGCTTTATCACCGATACAGGCCGCGCCTGTGCGGA
GCTGGAAAAGCCTTACGTGTTGGTAACGAACCACGTGATTTCCAACCTCC
GCGAGATGGTGACCCTCCTAGAGACTTTCGCCAATTCGGAACGACAACTC
CTCATCATTGCGGAAGACATCAAGGGAGAGGCGCGTGAAGCTTTGGTTAT
GAACAAGGAGCGGGGTTCTCTCAAGGTGGCTGCAATGAAAGGCCCTGGAT
TTGGTGTGTTCCGTCAAGACTACTACACGGACATTGCGATCGCCACCGGC
GCCACCTTCGTGGCCAAGGAAACTGGAATCGGGCTTGAAAAAGTGACATT
GGATATGCTCGGGCAAGCCACTAAGGCCATCCTGAGGCAAGAAAGTGCCA
CGCTCCTCCTGACGGGCAAGCACAAGGATGCGGTCAACGCCCGCATTGCC
TCCATTCGTGAATCGATGGATGACTTGGACTCCATGTTTGACAAAGAAAA
ATCAGAGGAACGGATCGCGTCTCTTGCCGGCGGCGTAGCACGGATACGCG
TCGGTGCAGCGACAGAAGTGGAGCTGAAGGACAAAAAACTAAGGTACGAG
GACGCTGTCAACTCCGTCAAGAACTCGCTCAAGTATGGAGTCCTCCCCGG
GGGTGGCACCACCCTTCTGTACTTGAAGCGCTACCGGGACGAGGTAGTGA
AGACATTGAAAGCGGATGGCCTGGACGACGAGGTCTTTGGCGCCGACATC
TTATTTGATGCCCTGTCGGAGCCCATGAGGCAAATCGCGGAGAACGCAGG
GAAACACGGAAACTTCATCGTCTCGAAGTGTGTGGACCGCGAGTTCGGGT
ACGGGTTTAATGCGGCGACCCTCACCTTTGAAAACCTGCTCGAGGCCGGG
GTGTTGGATGCGGCCACCGTGACAGAGAACAGTCTGGCCAATTCTGTGAG
TGTTGCCAGCTTGGTGTTGACGAGTGGGGGGATGGTAGTGGAGGACGAGG
CGGGCATGCGCAGGTTGGAACGGGAGAAGATCATGGACTACGCCAAGGCG
GGAGGAGGGATGATGTAG

Synonyms

Publications