NO07G00540.1, NO07G00540.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO07G00540.1
Unique NameNO07G00540.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3651
Alignment locationchr7:198620..202364 +

Link to JBrowse

Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr7genomechr7:198620..202364 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
[Close]
BLAST of NO07G00540.1 vs.
Match: EWM27314.1 (Amino acid transporter, transmembrane [Nannochloropsis gaditana])

HSP 1 Score: 510.8 bits (1314), Expect = 6.400e-141
Identity = 331/641 (51.64%), Postives = 396/641 (61.78%), Query Frame = 0 
Query:   22 YDYTHLKKYYYHHNRREAPEMPAVAVPSGSSLPDGNEGYNRLAPSPRDIERPNDKQHEGVNNNLFRNTGRGPLLLADPTQDEDSDNDEDAPPHDDKDDNESNSNGGVPLLHPSTFLPITTTPTTSTTNQAAMWSCVAVLANNMMGAGTLGLPFAVAQTGWLLGGILLIGSAIMSAHGFLLLTLSAHTVQQRTPASSSSSSSSSSSSSPSSSPPTPSAASFYSLCQACIPRYTFLVDLAVAIKCFGVAISYLVIVGDLLPDVVKEFRQHALTSSASDIWEERWLWIVLAFLMVVPLSFQQRLSALRYTSGVSVGIVLCLAVVALMYASGAWNACAGTENPQNGGV---DTLPPALNVARGAAGALDEATKGLATDAAAAAVAATIAALTSSSSSVSSSSFS--------SCRGRYVMARGGHNALQVLPIFVYSYTAHQNFGLLLNELKGPSPRRVRQTLTAATGLALLTYLLLAQAAYYAYGAALQHDLLSSFPASRLSTCLRAAMSLLVTFTYPLQAHPARACLLALW-----PDTNSSNSSSGSDRKNKEQLLSFRYTCVTLLFLFSSLLLALLIHDLSLVLEIVGATGSTTVSYLLPGLTYFLLHPWSHLRRRLAVAQVVVGMVVMGTCMLAILMKER 647
            + +T  +  Y    +    EMPA   P G     GNEGY++L   P + + P+   H+  +          P++    T D   D +E+    +     E  S+             +   P     NQAAMWSCVAVLANNMMGAG LGLP+AVAQ+GWL+GG LL+ SA++S HGF LLT SA T+ QR            S S P   P  P  ASFY+LCQ C+PR T LVD  VA+KCFGVAISYLVIVGDLLPDVVKE RQH L    +D+WEERW+W+ LAFL+V PLSF   LSALR+TSG+SVGIVL L +VAL+YA    N C GT    + GV    T PPA+                       A+VAAT+ A+  + S  +    S         CRG   +A  G   LQVLPIFVYSYTAHQNFGLL NEL  P+PRR RQT+ AATGL+L  YL LA AAY  YGAALQ DLL SFPAS LST LRAA+S+LVTFTYPLQAHPAR CLLALW      +T+ S             L++FR TCVTLLFL +SLL+ALL+ DLSLVLEIVGATGST VSYLLPGL YF  HPW H RRRLA+ QV+VG+ VM TC++AI+++ER
Sbjct:   26 HSHTTEESLYITRKKNCGGEMPAGGEPLG-----GNEGYSQLVHYPPERDPPSSLVHDEEDVGNAWQMPFSPVVDLSRTPDLGEDEEEECLGEEGHTPQEQGSD-------------LLLNPAPPKANQAAMWSCVAVLANNMMGAGILGLPYAVAQSGWLVGGSLLLLSAVLSGHGFDLLTRSARTIHQR------------SLSGPHVPPSRPRPASFYTLCQVCMPRGTVLVDATVAVKCFGVAISYLVIVGDLLPDVVKEARQHPLGGPPADVWEERWVWVTLAFLLVAPLSFASHLSALRFTSGISVGIVLVLTLVALLYAGQVLNPCQGT----SFGVTRQPTPPPAM-----------------------ASVAATLGAVYPARSPHNRPRPSRPVLALAPPCRGPVKIAGTGPAILQVLPIFVYSYTAHQNFGLLCNELANPTPRRTRQTIMAATGLSLGVYLTLAFAAYLTYGAALQRDLLLSFPASLLSTSLRAALSVLVTFTYPLQAHPARTCLLALWALWAGEETHRSGRRESCPAPLSPPLVAFRATCVTLLFLAASLLIALLVQDLSLVLEIVGATGSTAVSYLLPGLLYFYAHPWPHFRRRLALGQVLVGLAVMITCLVAIVLRER 609
The following BLAST results are available for this feature:
BLAST of NO07G00540.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1
Match NameE-valueIdentityDescription
EWM27314.16.400e-14151.64Amino acid transporter, transmembrane [Nannochloro... [more]
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO07G00540NO07G00540Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO07G00540.1NO07G00540.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO07G00540.1.cds1NO07G00540.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO07G00540.1.cds2NO07G00540.1.cds2Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO07G00540.1 ID=NO07G00540.1|Name=NO07G00540.1|organism=Nannochloropsis oceanica|type=mRNA|length=3651bp
CCCTCCTCTCCCCCCCCCTCCCCCCTCCGATGCCAGCCCAGGCGATGGGC
AGGACTCCCAGGGAAGGAGAAAGGCCCTCAGGGCGAGGGAAGGGCACCCG
CAGCTCCTTAAAGGCAGAGCGGTGCTTCAACCCCACCCAATTTTCGCTTA
GGACCAAAAACGCCCCCAACAACGTCGTCGAGGAGGAGGAAGGGAAGGAG
GAGGGCAAGGCTAGCAACCCTGTACCTGTGGAGGAGACAGGCATGCGCCA
TCCCTTCTCCTCCTGCGTCAAACTGTTACTCTTCAAATCGAGCTCGAAAA
CCGTAACGTGCTTCAGGCTCTCCTCTGGCAAGTCCAACCCATCCGCCTCC
CTTGCCGCCAGCCGCTCCTGGGCATACATGCCGTCCTCCTCATCCCCGCC
CGCCAGCACAGCAAATGCCGGTGGGCCACTCCCGACATCTAGAGCAATCA
CATCAAAGACCGTCGCTTTCCCACTCACCTTCCTTCCTCCTCCCCCCTTC
CCGACCAAGCCTTTTTTCGTCTCCCTTAATTCAATCTCGCCTGTTCCTTT
ATCTCTCAAGACGACAGCACAGGCTTTATGCCCATCGAGAGAACAAGCAA
AAATTGCTCGTCCTGAGGGATCTGCCGCCACATATTGACCCGGCACGCCT
CGATAGCAGCCCGACAGCCCTACAGAGAGGGAGGCAACCCGACGGAGGAA
GTAGTGGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGGTGG
TGGTGGTGGTGGTGTTACTGGTGGTGGTGGAGGTAGAGGTAGCAACAAGT
TCGATCAACGCGATTATCCCGGAGTCGGAGCCCACGACCAACAAATCCTT
CGGTCCGCCCACTGGGCGAATTGTAGTCATGGACCTGATCGTGGAAAAGG
AAGGCTGTGAGCACAGTATCTGGAGTGCGTCGCCTTCTTCTTTTCCTGCT
GCGCCTTCTCCATCGTCTTTTTTTCCCTCTGCCTCATCCTCGACCGCATT
GTCCCTGCCGGGAAGCACACAGGCCACTTCCAACGTGCCGACCCCGCGGA
CCATGGCCAAAAGCTCCTCCTCCTCCGCCTCTCCTTCCTCCCCCTCCAGG
AAGTGACCAACCACCACCCGGCTGACGCCCGTCGGATGTTTCAGAGTGTA
GGCGGCTAGGTTCATCGTGCTGGCCCCGCCTGTGAGGTGTGTGTATGGAA
GGGTGGAGCTATGAAGGGAGGCGAGGCGAGGGGTTTGTTCGATGATTGTT
GCAGAGGACTTGGGGGCGAGGCCGAAGCAGGGGACGACGACCACCACGAG
GCAGCGACACACCGGCACTATTTATGTGTTTGCCTTGCCTCTGTCTTGAG
GGCATGCGTGGATGCGAGGAGTATGTTGCAGTCAGACGCGAGAGCTGAAG
ACAGAGGTCGAAGAAGCAGCGACGATGGCGCAGTGTGGCTGATGATATGT
GATGTGCTGTCCTTGCGATATGGACTGCCCACGTTTCTCATATTCACGCA
CGCTGCTCCGACAATATGACTACACACACCTCAAAAAATATTATTACCAC
CACAATAGGCGGGAAGCGCCAGAGATGCCGGCGGTGGCCGTGCCATCCGG
GAGCAGCCTGCCAGACGGCAACGAGGGCTATAATCGGCTGGCTCCTTCCC
CACGAGATATTGAGAGGCCCAACGACAAGCAGCACGAAGGCGTGAACAAC
AACCTCTTTCGAAATACCGGCCGCGGCCCTCTACTCCTCGCAGACCCTAC
GCAGGACGAGGACAGCGACAACGACGAAGACGCTCCTCCCCATGATGACA
AGGACGACAATGAATCGAATAGCAACGGCGGCGTTCCCCTCCTCCATCCC
TCCACGTTCCTTCCCATCACAACCACCCCCACAACTTCTACCACGAACCA
AGCCGCCATGTGGTCGTGTGTCGCCGTCCTGGCGAACAACATGATGGGCG
CCGGTACGCTCGGCCTTCCTTTTGCAGTCGCGCAAACAGGCTGGCTTTTG
GGAGGGATACTTCTCATCGGGAGCGCTATAATGAGCGCTCATGGATTCCT
GCTCTTGACCCTATCCGCCCACACTGTACAACAACGAACCCCCGCCTCCT
CCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCCCCTCATCATCCCCT
CCCACCCCCTCTGCAGCCTCCTTCTACTCCCTCTGTCAAGCATGCATCCC
TCGTTACACCTTCCTGGTCGACCTTGCAGTAGCAATTAAGTGCTTTGGAG
TCGCCATTTCGTACCTGGTAATAGTAGGCGACCTTCTCCCTGACGTTGTC
AAAGAATTCAGACAGCACGCCCTCACCTCCTCCGCCTCCGATATATGGGA
AGAGCGATGGCTCTGGATCGTGCTTGCCTTCTTGATGGTGGTGCCTCTGA
GTTTCCAGCAGAGGCTGTCGGCATTGAGGTATACGAGTGGAGTCTCCGTA
GGGATTGTCTTGTGCCTGGCCGTGGTTGCATTAATGTATGCCAGTGGGGC
GTGGAATGCGTGTGCTGGCACAGAGAACCCCCAAAATGGGGGCGTTGATA
CGCTTCCACCTGCTCTAAATGTTGCTCGTGGTGCTGCTGGAGCACTAGAC
GAGGCCACGAAGGGCCTTGCGACAGATGCAGCAGCAGCAGCAGTAGCAGC
TACTATTGCTGCTCTCACCTCCTCCTCCTCCTCCGTCTCCTCCTCCTCCT
TCTCCTCTTGCCGTGGCCGTTACGTCATGGCCCGTGGTGGCCATAACGCC
CTACAAGTTCTCCCCATCTTCGTCTATTCATACACAGCGCACCAAAACTT
CGGCCTTCTGCTCAACGAGCTCAAGGGCCCATCCCCCCGTCGCGTCCGCC
AGACCCTTACTGCCGCCACTGGTCTCGCCCTCCTCACCTATCTTCTCCTA
GCCCAAGCCGCCTATTACGCTTATGGTGCCGCGCTCCAGCATGATCTTCT
TTCCTCCTTCCCTGCGTCGCGCCTATCTACATGTCTGCGGGCCGCCATGT
CCTTGTTAGTCACATTCACGTATCCTCTCCAAGCACACCCTGCCCGCGCT
TGCCTTCTGGCCCTATGGCCAGACACCAACAGCAGCAACAGCAGCAGTGG
TAGTGATAGGAAAAACAAAGAGCAGCTTCTCTCCTTCCGGTACACCTGCG
TCACCCTCCTCTTCCTCTTCTCCTCCCTCCTCCTCGCCCTCCTCATTCAC
GACCTCTCCCTCGTCCTGGAGATCGTCGGTGCAACCGGCTCCACCACCGT
ATCTTACCTCCTTCCAGGCCTCACCTACTTCCTCCTCCACCCTTGGTCGC
ATCTACGGCGGCGCTTGGCCGTGGCCCAGGTGGTGGTGGGGATGGTGGTG
ATGGGCACATGCATGTTGGCCATTTTGATGAAGGAACGCTGAGAGGAGAT
AGACTGGAGGAAGGAGGGAGAGAAGGGGGGAGAAGGAAGGGTGTGGATGT
AGGGTTGGTAGGAATAGGGAGATCTCCTGAATGGACTCAAAAGTGCTTAT
GCGGGACGTGGACATAGGGACCGAAAACATTGTACAGAGAAATTTATAAA
CACAAATAAGAGGTGGTTGATTGGAAAGAAATGGAAGAAGGGGGTACTGT
TGGTTAAGGCTTCTCGTGTGTTGAGACGTAGACAAAGAAGAAACGAGTAC
A
back to top

protein sequence of NO07G00540.1

>NO07G00540.1-protein ID=NO07G00540.1-protein|Name=NO07G00540.1|organism=Nannochloropsis oceanica|type=polypeptide|length=647bp
MCCPCDMDCPRFSYSRTLLRQYDYTHLKKYYYHHNRREAPEMPAVAVPSG
SSLPDGNEGYNRLAPSPRDIERPNDKQHEGVNNNLFRNTGRGPLLLADPT
QDEDSDNDEDAPPHDDKDDNESNSNGGVPLLHPSTFLPITTTPTTSTTNQ
AAMWSCVAVLANNMMGAGTLGLPFAVAQTGWLLGGILLIGSAIMSAHGFL
LLTLSAHTVQQRTPASSSSSSSSSSSSSPSSSPPTPSAASFYSLCQACIP
RYTFLVDLAVAIKCFGVAISYLVIVGDLLPDVVKEFRQHALTSSASDIWE
ERWLWIVLAFLMVVPLSFQQRLSALRYTSGVSVGIVLCLAVVALMYASGA
WNACAGTENPQNGGVDTLPPALNVARGAAGALDEATKGLATDAAAAAVAA
TIAALTSSSSSVSSSSFSSCRGRYVMARGGHNALQVLPIFVYSYTAHQNF
GLLLNELKGPSPRRVRQTLTAATGLALLTYLLLAQAAYYAYGAALQHDLL
SSFPASRLSTCLRAAMSLLVTFTYPLQAHPARACLLALWPDTNSSNSSSG
SDRKNKEQLLSFRYTCVTLLFLFSSLLLALLIHDLSLVLEIVGATGSTTV
SYLLPGLTYFLLHPWSHLRRRLAVAQVVVGMVVMGTCMLAILMKER*
back to top

mRNA from alignment at chr7:198620..202364+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO07G00540.1 ID=NO07G00540.1|Name=NO07G00540.1|organism=Nannochloropsis oceanica|type=mRNA|length=3745bp|location=Sequence derived from alignment at chr7:198620..202364+ (Nannochloropsis oceanica)
CCCTCCTCTCCCCCCCCCTCCCCCCTCCGATGCCAGCCCAGGCGATGGGC
AGGACTCCCAGGGAAGGAGAAAGGCCCTCAGGGCGAGGGAAGGGCACCCG
CAGCTCCTTAAAGGCAGAGCGGTGCTTCAACCCCACCCAATTTTCGCTTA
GGACCAAAAACGCCCCCAACAACGTCGTCGAGGAGGAGGAAGGGAAGGAG
GAGGGCAAGGCTAGCAACCCTGTACCTGTGGAGGAGACAGGCATGCGCCA
TCCCTTCTCCTCCTGCGTCAAACTGTTACTCTTCAAATCGAGCTCGAAAA
CCGTAACGTGCTTCAGGCTCTCCTCTGGCAAGTCCAACCCATCCGCCTCC
CTTGCCGCCAGCCGCTCCTGGGCATACATGCCGTCCTCCTCATCCCCGCC
CGCCAGCACAGCAAATGCCGGTGGGCCACTCCCGACATCTAGAGCAATCA
CATCAAAGACCGTCGCTTTCCCACTCACCTTCCTTCCTCCTCCCCCCTTC
CCGACCAAGCCTTTTTTCGTCTCCCTTAATTCAATCTCGCCTGTTCCTTT
ATCTCTCAAGACGACAGCACAGGCTTTATGCCCATCGAGAGAACAAGCAA
AAATTGCTCGTCCTGAGGGATCTGCCGCCACATATTGACCCGGCACGCCT
CGATAGCAGCCCGACAGCCCTACAGAGAGGGAGGCAACCCGACGGAGGAA
GTAGTGGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGGTGG
TGGTGGTGGTGGTGTTACTGGTGGTGGTGGAGGTAGAGGTAGCAACAAGT
TCGATCAACGCGATTATCCCGGAGTCGGAGCCCACGACCAACAAATCCTT
CGGTCCGCCCACTGGGCGAATTGTAGTCATGGACCTGATCGTGGAAAAGG
AAGGCTGTGAGCACAGTATCTGGAGTGCGTCGCCTTCTTCTTTTCCTGCT
GCGCCTTCTCCATCGTCTTTTTTTCCCTCTGCCTCATCCTCGACCGCATT
GTCCCTGCCGGGAAGCACACAGGCCACTTCCAACGTGCCGACCCCGCGGA
CCATGGCCAAAAGCTCCTCCTCCTCCGCCTCTCCTTCCTCCCCCTCCAGG
AAGTGACCAACCACCACCCGGCTGACGCCCGTCGGATGTTTCAGAGTGTA
GGCGGCTAGGTTCATCGTGCTGGCCCCGCCTGTGAGGTGTGTGTATGGAA
GGGTGGAGCTATGAAGGGAGGCGAGGCGAGGGGTTTGTTCGATGATTGTT
GCAGAGGACTTGGGGGCGAGGCCGAAGCAGGGGACGACGACCACCACGAG
GCAGCGACACACCGGCACTATTTATGTGTTTGCCTTGCCTCTGTCTTGAG
GGCATGCGTGGATGCGAGGAGTATGTTGCAGTCAGACGCGAGAGCTGAAG
ACAGAGGTCGAAGAAGCAGCGACGATGGCGCAGTGTGGCTGATGATATGT
GATGTGCTGTCCTTGCGATATGGACTGCCCACGTTTCTCATATTCACGCA
CGCTGCTCCGACAATATGACTACACACACCTCAAAAAATATTATTACCAC
CACAATAGGCGGGAAGCGCCAGAGATGCCGGCGGTGGCCGTGCCATCCGG
GAGCAGCCTGCCAGACGGCAACGAGGTAACTTCCCTTACCCCCTGTCCTC
TCTGCCCTCACCACCCTTCCATCCCTCTTCCTGACATTGTCCAACCCTCT
CCCCCGGCCTGTCATACAGGGCTATAATCGGCTGGCTCCTTCCCCACGAG
ATATTGAGAGGCCCAACGACAAGCAGCACGAAGGCGTGAACAACAACCTC
TTTCGAAATACCGGCCGCGGCCCTCTACTCCTCGCAGACCCTACGCAGGA
CGAGGACAGCGACAACGACGAAGACGCTCCTCCCCATGATGACAAGGACG
ACAATGAATCGAATAGCAACGGCGGCGTTCCCCTCCTCCATCCCTCCACG
TTCCTTCCCATCACAACCACCCCCACAACTTCTACCACGAACCAAGCCGC
CATGTGGTCGTGTGTCGCCGTCCTGGCGAACAACATGATGGGCGCCGGTA
CGCTCGGCCTTCCTTTTGCAGTCGCGCAAACAGGCTGGCTTTTGGGAGGG
ATACTTCTCATCGGGAGCGCTATAATGAGCGCTCATGGATTCCTGCTCTT
GACCCTATCCGCCCACACTGTACAACAACGAACCCCCGCCTCCTCCTCCT
CCTCCTCCTCCTCCTCCTCCTCCTCCTCCCCCTCATCATCCCCTCCCACC
CCCTCTGCAGCCTCCTTCTACTCCCTCTGTCAAGCATGCATCCCTCGTTA
CACCTTCCTGGTCGACCTTGCAGTAGCAATTAAGTGCTTTGGAGTCGCCA
TTTCGTACCTGGTAATAGTAGGCGACCTTCTCCCTGACGTTGTCAAAGAA
TTCAGACAGCACGCCCTCACCTCCTCCGCCTCCGATATATGGGAAGAGCG
ATGGCTCTGGATCGTGCTTGCCTTCTTGATGGTGGTGCCTCTGAGTTTCC
AGCAGAGGCTGTCGGCATTGAGGTATACGAGTGGAGTCTCCGTAGGGATT
GTCTTGTGCCTGGCCGTGGTTGCATTAATGTATGCCAGTGGGGCGTGGAA
TGCGTGTGCTGGCACAGAGAACCCCCAAAATGGGGGCGTTGATACGCTTC
CACCTGCTCTAAATGTTGCTCGTGGTGCTGCTGGAGCACTAGACGAGGCC
ACGAAGGGCCTTGCGACAGATGCAGCAGCAGCAGCAGTAGCAGCTACTAT
TGCTGCTCTCACCTCCTCCTCCTCCTCCGTCTCCTCCTCCTCCTTCTCCT
CTTGCCGTGGCCGTTACGTCATGGCCCGTGGTGGCCATAACGCCCTACAA
GTTCTCCCCATCTTCGTCTATTCATACACAGCGCACCAAAACTTCGGCCT
TCTGCTCAACGAGCTCAAGGGCCCATCCCCCCGTCGCGTCCGCCAGACCC
TTACTGCCGCCACTGGTCTCGCCCTCCTCACCTATCTTCTCCTAGCCCAA
GCCGCCTATTACGCTTATGGTGCCGCGCTCCAGCATGATCTTCTTTCCTC
CTTCCCTGCGTCGCGCCTATCTACATGTCTGCGGGCCGCCATGTCCTTGT
TAGTCACATTCACGTATCCTCTCCAAGCACACCCTGCCCGCGCTTGCCTT
CTGGCCCTATGGCCAGACACCAACAGCAGCAACAGCAGCAGTGGTAGTGA
TAGGAAAAACAAAGAGCAGCTTCTCTCCTTCCGGTACACCTGCGTCACCC
TCCTCTTCCTCTTCTCCTCCCTCCTCCTCGCCCTCCTCATTCACGACCTC
TCCCTCGTCCTGGAGATCGTCGGTGCAACCGGCTCCACCACCGTATCTTA
CCTCCTTCCAGGCCTCACCTACTTCCTCCTCCACCCTTGGTCGCATCTAC
GGCGGCGCTTGGCCGTGGCCCAGGTGGTGGTGGGGATGGTGGTGATGGGC
ACATGCATGTTGGCCATTTTGATGAAGGAACGCTGAGAGGAGATAGACTG
GAGGAAGGAGGGAGAGAAGGGGGGAGAAGGAAGGGTGTGGATGTAGGGTT
GGTAGGAATAGGGAGATCTCCTGAATGGACTCAAAAGTGCTTATGCGGGA
CGTGGACATAGGGACCGAAAACATTGTACAGAGAAATTTATAAACACAAA
TAAGAGGTGGTTGATTGGAAAGAAATGGAAGAAGGGGGTACTGTTGGTTA
AGGCTTCTCGTGTGTTGAGACGTAGACAAAGAAGAAACGAGTACA
back to top

Coding sequence (CDS) from alignment at chr7:198620..202364+

>NO07G00540.1 ID=NO07G00540.1|Name=NO07G00540.1|organism=Nannochloropsis oceanica|type=CDS|length=1941bp|location=Sequence derived from alignment at chr7:198620..202364+ (Nannochloropsis oceanica)
ATGTGCTGTCCTTGCGATATGGACTGCCCACGTTTCTCATATTCACGCAC
GCTGCTCCGACAATATGACTACACACACCTCAAAAAATATTATTACCACC
ACAATAGGCGGGAAGCGCCAGAGATGCCGGCGGTGGCCGTGCCATCCGGG
AGCAGCCTGCCAGACGGCAACGAGGGCTATAATCGGCTGGCTCCTTCCCC
ACGAGATATTGAGAGGCCCAACGACAAGCAGCACGAAGGCGTGAACAACA
ACCTCTTTCGAAATACCGGCCGCGGCCCTCTACTCCTCGCAGACCCTACG
CAGGACGAGGACAGCGACAACGACGAAGACGCTCCTCCCCATGATGACAA
GGACGACAATGAATCGAATAGCAACGGCGGCGTTCCCCTCCTCCATCCCT
CCACGTTCCTTCCCATCACAACCACCCCCACAACTTCTACCACGAACCAA
GCCGCCATGTGGTCGTGTGTCGCCGTCCTGGCGAACAACATGATGGGCGC
CGGTACGCTCGGCCTTCCTTTTGCAGTCGCGCAAACAGGCTGGCTTTTGG
GAGGGATACTTCTCATCGGGAGCGCTATAATGAGCGCTCATGGATTCCTG
CTCTTGACCCTATCCGCCCACACTGTACAACAACGAACCCCCGCCTCCTC
CTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCCCCTCATCATCCCCTC
CCACCCCCTCTGCAGCCTCCTTCTACTCCCTCTGTCAAGCATGCATCCCT
CGTTACACCTTCCTGGTCGACCTTGCAGTAGCAATTAAGTGCTTTGGAGT
CGCCATTTCGTACCTGGTAATAGTAGGCGACCTTCTCCCTGACGTTGTCA
AAGAATTCAGACAGCACGCCCTCACCTCCTCCGCCTCCGATATATGGGAA
GAGCGATGGCTCTGGATCGTGCTTGCCTTCTTGATGGTGGTGCCTCTGAG
TTTCCAGCAGAGGCTGTCGGCATTGAGGTATACGAGTGGAGTCTCCGTAG
GGATTGTCTTGTGCCTGGCCGTGGTTGCATTAATGTATGCCAGTGGGGCG
TGGAATGCGTGTGCTGGCACAGAGAACCCCCAAAATGGGGGCGTTGATAC
GCTTCCACCTGCTCTAAATGTTGCTCGTGGTGCTGCTGGAGCACTAGACG
AGGCCACGAAGGGCCTTGCGACAGATGCAGCAGCAGCAGCAGTAGCAGCT
ACTATTGCTGCTCTCACCTCCTCCTCCTCCTCCGTCTCCTCCTCCTCCTT
CTCCTCTTGCCGTGGCCGTTACGTCATGGCCCGTGGTGGCCATAACGCCC
TACAAGTTCTCCCCATCTTCGTCTATTCATACACAGCGCACCAAAACTTC
GGCCTTCTGCTCAACGAGCTCAAGGGCCCATCCCCCCGTCGCGTCCGCCA
GACCCTTACTGCCGCCACTGGTCTCGCCCTCCTCACCTATCTTCTCCTAG
CCCAAGCCGCCTATTACGCTTATGGTGCCGCGCTCCAGCATGATCTTCTT
TCCTCCTTCCCTGCGTCGCGCCTATCTACATGTCTGCGGGCCGCCATGTC
CTTGTTAGTCACATTCACGTATCCTCTCCAAGCACACCCTGCCCGCGCTT
GCCTTCTGGCCCTATGGCCAGACACCAACAGCAGCAACAGCAGCAGTGGT
AGTGATAGGAAAAACAAAGAGCAGCTTCTCTCCTTCCGGTACACCTGCGT
CACCCTCCTCTTCCTCTTCTCCTCCCTCCTCCTCGCCCTCCTCATTCACG
ACCTCTCCCTCGTCCTGGAGATCGTCGGTGCAACCGGCTCCACCACCGTA
TCTTACCTCCTTCCAGGCCTCACCTACTTCCTCCTCCACCCTTGGTCGCA
TCTACGGCGGCGCTTGGCCGTGGCCCAGGTGGTGGTGGGGATGGTGGTGA
TGGGCACATGCATGTTGGCCATTTTGATGAAGGAACGCTGA
back to top
Synonyms
Publications