NO07G00300.1, NO07G00300.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO07G00300.1
Unique NameNO07G00300.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3689
Alignment locationchr7:116385..122713 -

Link to JBrowse

Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr7genomechr7:116385..122713 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
BLAST of NO07G00300.1 vs.
Match: OEU12353.1 (hypothetical protein FRACYDRAFT_244618 [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 283.5 bits (724), Expect = 2.000e-72
Identity = 164/399 (41.10%), Postives = 240/399 (60.15%), Query Frame = 0
Query:  409 GLVVSYREKNETLSSLT---KQKVRRMMHYQVPLKPFEATIRCANKTAQ-LEDDDGTYTAGGGSSTSTLDRAPSSSFRRSSSLFPSVMCTPQSFPPTPISRACVMARFSQFSDDIVYLARDQLRLEELVKADDDVTKMAAQSLKQQACLAVFNSEDTATGIVLSCGGHCATKVGTTGLYTSTRAMVPIMRNRHVFFQMSIMAE-------ESAVASLCIGLSTPEMPLNTLVGSWKYSIGFCSTGQILVGSRW--YGSSTKQYRFGCGCTIGVLIHIDECRSSESWDGELVEASLKFSVNG------MPVLLDATDGHPGGD--------------VTPLFIPKDDDIYPTLTLHSPSTQVLGRFCAADILHPHRSLVGAPLGVPVYALDGSVILKPDQ 775
            G V+ Y E  +    LT   K++V+RMMHY V L+PF AT++      Q    +DG+ + G  + TS+           SS L    MCTPQSFPPTP SRA V+ R S+F+DD+V+LARDQLR+ + +++ ++ T+  A +L +   LAVF+++D + GI LSCG H ATKVG   LY S+R+MVPI+RN  V+F+M+++         ++++A+L  GLST EMP NTLVG+WK S+G C+TGQIL+  +W   G       FG   T+G L+ +D+  + E+WDG ++ A++ F++NG      +P L    D HP                   PL +P ++++YPTLTLHSP T V+ RF A DI+   R  +G P  V VYA+DGS++ K ++
Sbjct:  342 GRVIKYTEIGDNDGGLTGKEKRRVQRMMHYDVSLRPFVATVKLQESFKQDSTTNDGSDSVGDYNETSS----------SSSPLDGPFMCTPQSFPPTPASRAHVLKRGSRFADDVVFLARDQLRVHDGLESSNERTREMAHALTEGKRLAVFDADDASAGIDLSCGQHVATKVGNL-LYCSSRSMVPILRNCFVYFEMTVLGRSGGGFIPQTSMATLSFGLSTKEMPPNTLVGAWKGSVGLCTTGQILIAGQWCSVGQDPTITPFGDRETVGCLVCLDDSSAFETWDGVMITATITFNINGRIVSPHVPCLPTGLDQHPQTSKLPDVPVGATPPSFTLPLLVPAEEELYPTLTLHSPGTSVMCRFSAEDIIARSREDIGVPPNVAVYAVDGSLVFKGEE 729          
The following BLAST results are available for this feature:
BLAST of NO07G00300.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1
Match NameE-valueIdentityDescription
OEU12353.12.000e-7241.10hypothetical protein FRACYDRAFT_244618 [Fragilario... [more]
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO07G00300NO07G00300Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO07G00300.1NO07G00300.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO07G00300.1.cds1NO07G00300.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO07G00300.1.cds2NO07G00300.1.cds2Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO07G00300.1.cds3NO07G00300.1.cds3Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO07G00300.1.cds4NO07G00300.1.cds4Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO07G00300.1.cds5NO07G00300.1.cds5Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO07G00300.1.cds6NO07G00300.1.cds6Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO07G00300.1.cds7NO07G00300.1.cds7Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO07G00300.1.cds8NO07G00300.1.cds8Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO07G00300.1.cds9NO07G00300.1.cds9Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO07G00300.1.cds10NO07G00300.1.cds10Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO07G00300.1.cds11NO07G00300.1.cds11Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO07G00300.1.cds12NO07G00300.1.cds12Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO07G00300.1.cds13NO07G00300.1.cds13Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO07G00300.1.cds14NO07G00300.1.cds14Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO07G00300.1.cds15NO07G00300.1.cds15Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO07G00300.1.cds16NO07G00300.1.cds16Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO07G00300.1.cds17NO07G00300.1.cds17Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO07G00300.1.cds18NO07G00300.1.cds18Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO07G00300.1.cds19NO07G00300.1.cds19Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO07G00300.1 ID=NO07G00300.1|Name=NO07G00300.1|organism=Nannochloropsis oceanica|type=mRNA|length=3689bp
GAAAGACCAACAACGATCCACCCACAGATATATCGGTAATTGTGCCTCGT
AACCTGTGTGTCCTTGTCCAATGCTCATGCCGGTGGATTTGAAGTGCACT
CTTTCCTGACATTGTCTCTTCGAATTGAATTTTCGCGAGCAATCGACGCC
TCGTCAGTTGTCATCGTCACGAGCCCGAGGCTTGACTGCTGTGGCCAGTT
CCTAAGAGCTTGCATTCCCCCTGCATTTCGTATTCTTTACACTGCGCCCC
CTTCATGTACGTGTCCGTCTGTTATTGCATGTCGCACAAGCGGGCCAGGG
GGGATTCATGTCCTTGAGCTTCTCTCCCGAACGCTTCTTCATGGCCAAGT
CGACGGATGCTTCGTCGAATGCATGCGTCGCGTCGTCGGGCTTCCCTTTC
TCGGAGGAGAGCGAGTTAGTTTTACTTTCGTAAGCAGTCCTCGGCCACCG
TACCCACGCACCCGCAATCTATGATATGACGAGCATTGGCAAGACGCTTT
CCATTGGCTGTAGTTCGCATATCATGTCCGTCGGTCACTTATGCCTCCTC
CCCTCCCTTCCCCCTTCGCCTCATCATCAGCAGGCTTCCTGGTAGCACCA
CCGCGCTAGGATGAAGGCCATGAAGGCCGCCCTGGGGAGCGTGGGCGGCA
AGAAGGAGAGGCAACAGCAGCAGCAACGACAACAACAACAACTACAGCAG
CTGCAACACCAGCAACAACAAGAAGCGGCAGCGGCTGCCGTCCTTGAGGC
TCCATCTCCTTCTCTGTCTCCCCCCTTGCCGCCTACCGTCCTACTGCACT
CGATGCCTCTGTCCGTGCCCATGACGATGGAAGAGGGCAAGGGCGAAGGG
GTGGGGGAGGAGCAGCAGCAGCAGCACCAGGGTGGCATACAGGTAGATGT
TGTGGAGGAAGTGGAACAGCAGCAATCGCCGCTGCTCTCCACGCCTCTTC
CTCCGCCCCCCCTTGTGGCGCCTCCTCCCTTGGTCTCAGCTTCCGGTGAA
AGCAAAAGAGGGGATAGGCGGGAGGATGAGGAGGAAATTTGGAGTGGGGG
CAGTGAAGAGGAGCCATACTTTACCTTTTCGCCCTCATCTTTGCCTCCCG
AGTGCTACGACACCGTGGACGGAGGCCGAGCGGGGTCTTCATGCCCCTCC
TGGGTGGGAAGCAGTACTACCTACGATCCTGCCCAGCCCTTCGCCCCCTA
TGGCATTGCCGAGCGCATCGCCTCCTTCCTGAGTGTGAAGGATATAGCCG
CCTACCTCGCCCTGGATGAGAAGGCCCAGTGGGGGTATGAGAGCTACACG
ACCATTCGTGACATTCTGGACTACCTCCTTGGCTCCCTCTCCCTCCTTCG
GCTCCTCGAGTGGGGCCTCGGGACCGCCGGTCGTCTGGCCCACGGCTCGG
TCATGCTGGTGGTGACGTGCGTGCGAGGGGTAGGCAATGGCATACACGCC
GTCTATGCACATATTATGGCCACTCTCTCCTACTTCCTCCGTCTGGGTCT
CGCCCTCTGGCGTGAGCTCCGATCCCTCTCCCTTCGTGAGCTCGTCCGTG
CCCTCCTCCTCCTCCTCACCGACAAACTCGAACGTGATGTCACGGGACGG
GAAAGCAGCAGTATGGGCTCTCGGTCCTCCTCGCACCACGGCTTAGGCCT
TGGTGGCTCGTCCAAGGGCCCCCTCCTCGGCTCGGCTGTCCTCAAAATGC
CTTCCTTCTTCAATTCGTTCAAAGAGCTGGACGAGCCCGCACAAGGCGAG
GACGAAGCCGGTGAACCCTTTGCTTTCCTCTCAGGCGCCATTCCCCAACT
AAACGCCGGTCTCGGCCGTCCATCCTCCAAGATGGGCCTTGTAGTATCCT
ATAGGGAAAAGAACGAAACCCTGTCCTCCCTGACCAAGCAGAAAGTCCGC
CGCATGATGCACTACCAGGTCCCCCTCAAGCCTTTCGAAGCCACCATCCG
CTGTGCCAACAAGACGGCTCAGCTCGAGGACGATGATGGCACGTACACCG
CCGGCGGAGGCAGCAGCACCAGCACCTTGGACCGAGCCCCCTCCTCCTCC
TTCCGGCGCTCCTCCTCCCTCTTCCCCTCCGTCATGTGCACCCCGCAGTC
CTTCCCTCCTACCCCCATCTCCCGCGCCTGCGTCATGGCTCGCTTCTCTC
AGTTCTCGGACGACATCGTTTACCTGGCACGGGACCAGCTGCGGTTGGAA
GAGCTCGTCAAGGCCGACGACGACGTGACCAAGATGGCTGCCCAGTCCCT
CAAGCAACAAGCCTGCCTCGCCGTCTTCAACTCGGAAGACACGGCCACCG
GCATCGTCCTCTCCTGCGGGGGGCACTGCGCGACCAAGGTGGGCACCACG
GGCCTCTACACCTCCACCCGGGCCATGGTTCCCATCATGCGCAATCGCCA
TGTGTTCTTCCAGATGTCCATCATGGCGGAGGAGTCTGCCGTCGCCTCCC
TCTGCATCGGTTTATCCACCCCTGAGATGCCCCTCAACACCCTCGTAGGC
TCCTGGAAGTACAGCATTGGCTTTTGCTCCACAGGCCAGATTCTGGTGGG
CTCTCGCTGGTACGGCAGTTCCACAAAACAGTATCGCTTCGGGTGTGGGT
GCACCATCGGTGTTCTCATCCACATAGACGAGTGCCGCTCTTCTGAGTCG
TGGGACGGCGAGCTCGTCGAGGCCTCCCTCAAATTTTCGGTCAATGGCAT
GCCCGTGCTGCTTGACGCAACCGATGGCCACCCCGGCGGCGACGTGACTC
CCCTCTTCATCCCAAAGGATGACGATATATATCCCACACTCACCCTCCAC
TCGCCCAGCACACAAGTCCTGGGCCGCTTTTGCGCAGCCGATATCCTGCA
TCCGCATCGGTCCCTGGTCGGGGCGCCTCTTGGAGTGCCTGTGTATGCTC
TGGATGGGAGTGTCATCCTCAAGCCCGATCAGGACGTGGGAACCAGCAAT
ATATAGGGAGGAAGGGAGGAGCGTGTTGCCGGAAAGAGGGTGGCATATCG
ATTTGTTAATGTTGACTTCCATTCTTAAAAGACAGGGGGGAAAGGAAGGA
AGAGAATGAGGGAGGACAGAAGGCATGTGTATCATTTGTATGTGAGAGCG
GAGGGTGTGTGAGTGGTTGTGTGAGTGGGGAGGACGGCCGAGAGGGGAGG
AATGGAAGAAGGGAGGGGGGAAGGTGAATGCAGGGAGGGTAGATATCGGA
GCATTCTGCACATGAGCGCCTCTCTTTTCGTGAAGAGGAAACGATAGATA
TCTCATGGAGAGGGGCGGAATGGGGAGAGGGGAAAAAAGGCGACACGGCA
CTTGTAGTAGTATGAGGACGAGGAGGAGAAAGTGGAGGGGGAGTAGGAGG
AGAGGAGGAGGCGGAGGAGAATTAGAAAACGAGGACAAGGGGAAGAAAAA
GTAGAGGAAGGAGAAGGAGAAGGCGGAGGAGAAGTGGGGGAGTGTCATAA
GGCGCTTTCAAGCAACAGCAGCAGCAGCAGCAGTAGCAGATGGAAGCAGA
ATATCCTGGATTTGTGAGAAATCTTGTGTGCGCACTTGGTCTTTTTTTGG
AAAAAGTTATTAATTTATATCGGCAGATAATGTGCATGTTGCTTCGAAAC
ACCCCCCCGAAAACGTCGCCGAGTACATAAATTATTTGCGCGAAAAAGGT
GTTAAAAAAAAGCTACCAACCATAAAGATATTTGGAAAG
back to top

protein sequence of NO07G00300.1

>NO07G00300.1-protein ID=NO07G00300.1-protein|Name=NO07G00300.1|organism=Nannochloropsis oceanica|type=polypeptide|length=782bp
MKAMKAALGSVGGKKERQQQQQRQQQQLQQLQHQQQQEAAAAAVLEAPSP
SLSPPLPPTVLLHSMPLSVPMTMEEGKGEGVGEEQQQQHQGGIQVDVVEE
VEQQQSPLLSTPLPPPPLVAPPPLVSASGESKRGDRREDEEEIWSGGSEE
EPYFTFSPSSLPPECYDTVDGGRAGSSCPSWVGSSTTYDPAQPFAPYGIA
ERIASFLSVKDIAAYLALDEKAQWGYESYTTIRDILDYLLGSLSLLRLLE
WGLGTAGRLAHGSVMLVVTCVRGVGNGIHAVYAHIMATLSYFLRLGLALW
RELRSLSLRELVRALLLLLTDKLERDVTGRESSSMGSRSSSHHGLGLGGS
SKGPLLGSAVLKMPSFFNSFKELDEPAQGEDEAGEPFAFLSGAIPQLNAG
LGRPSSKMGLVVSYREKNETLSSLTKQKVRRMMHYQVPLKPFEATIRCAN
KTAQLEDDDGTYTAGGGSSTSTLDRAPSSSFRRSSSLFPSVMCTPQSFPP
TPISRACVMARFSQFSDDIVYLARDQLRLEELVKADDDVTKMAAQSLKQQ
ACLAVFNSEDTATGIVLSCGGHCATKVGTTGLYTSTRAMVPIMRNRHVFF
QMSIMAEESAVASLCIGLSTPEMPLNTLVGSWKYSIGFCSTGQILVGSRW
YGSSTKQYRFGCGCTIGVLIHIDECRSSESWDGELVEASLKFSVNGMPVL
LDATDGHPGGDVTPLFIPKDDDIYPTLTLHSPSTQVLGRFCAADILHPHR
SLVGAPLGVPVYALDGSVILKPDQDVGTSNI*
back to top

mRNA from alignment at chr7:116385..122713-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO07G00300.1 ID=NO07G00300.1|Name=NO07G00300.1|organism=Nannochloropsis oceanica|type=mRNA|length=6329bp|location=Sequence derived from alignment at chr7:116385..122713- (Nannochloropsis oceanica)
GAAAGACCAACAACGATCCACCCACAGATATATCGGTAATTGTGCCTCGT AACCTGTGTGTCCTTGTCCAATGCTCATGCCGGTGGATTTGAAGTGCACT CTTTCCTGACATTGTCTCTTCGAATTGAATTTTCGCGAGCAATCGACGCC TCGTCAGTTGTCATCGTCACGAGCCCGAGGCTTGACTGCTGTGGCCAGTT CCTAAGAGCTTGCATTCCCCCTGCATTTCGTATTCTTTACACTGCGCCCC CTTCATGTACGTGTCCGTCTGTTATTGCATGTCGCACAAGCGGGCCAGGG GGGATTCATGTCCTTGAGCTTCTCTCCCGAACGCTTCTTCATGGCCAAGT CGACGGATGCTTCGTCGAATGCATGCGTCGCGTCGTCGGGCTTCCCTTTC TCGGAGGAGAGCGAGTTAGTTTTACTTTCGTAAGCAGTCCTCGGCCACCG TACCCACGCACCCGCAATCTATGATATGACGAGCATTGGCAAGACGCTTT CCATTGGCTGTAGTTCGCATATCATGTCCGTCGGTCACTTATGCCTCCTC CCCTCCCTTCCCCCTTCGCCTCATCATCAGCAGGCTTCCTGGTAGCACCA CCGCGCTAGGATGAAGGCCATGAAGGCCGCCCTGGGGAGCGTGGGCGGCA AGAAGGAGAGGCAACAGCAGCAGCAACGACAACAACAACAACTACAGCAG CTGCAACACCAGCAACAACAAGAAGCGGCAGCGGCTGCCGTCCTTGAGGC TCCATCTCCTTCTCTGTCTCCCCCCTTGCCGCCTACCGTCCTACTGCACT CGATGCCTCTGTCCGTGCCCATGACGATGGAAGAGGGCAAGGGCGAAGGG GTGGGGGAGGAGCAGCAGCAGCAGCACCAGGGTGGCATACAGGTAGATGT TGTGGAGGAAGTGGAACAGCAGCAATCGCCGCTGCTCTCCACGCCTCTTC CTCCGCCCCCCCTTGTGGCGCCTCCTCCCTTGGTCTCAGCTTCCGGTGAA AGCAAAAGAGGGGATAGGCGGGAGGATGAGGAGGAAATTTGGAGTGGGGG CAGTGAAGAGGAGCCATACTTTACCTTTTCGCCCTCATCTTTGCCTCCCG AGTGCTACGGTACGCAAGAAGGGAGGGAGGGAGGGAGGGAGGAACCATGG AAGGAGGAAGGGAGGGAAACGACTACAGAAATTCTCTTCTGGTCCTTGAA AGACTCACCATACACCTTTTCTCTCTTCTTCCTCCTTTTTACCCCCGCCC CCTCAATTTCTCCACGCAGACACCGTGGACGGAGGCCGAGCGGGGTCTTC ATGCCCCTCCTGGGTGGGAAGCAGTACTACCTACGATCCTGCCCAGCCCT TCGCCCCCTATGGCATTGCCGAGCGCATCGCCTCCTTCCTGAGTGTGAAG GATATAGCCGCCTACCTCGCCCTGGATGAGAAGGCCCAGTGGGGGTATGA GGTACGGAGGGAGGGCTGGAGGGACGGAGGGAGGGAGAGAGGGAGGGAGG GACGACCACTGGCGTGCTTGCTAGCCGTACTTGCCATAGGACTTACAAGC ACTTGCCTCCTTTCTTCCTTCCTTCTTTCCCTCTCTCCCTCACCCCTTCT GTTTCTCTGTAGAGCTACACGACCATTCGTGACATTCTGGACTACCTCCT TGGCTCCCTCTCCCTCCTTCGGCTCCTCGAGTGGGGCCTCGGGACCGCCG GTCGTCTGGCCCACGTACGTCCTCCCTCCCTCCTTCCCTCCCTTCCTCCC TCCCTCCCTCCCTCCCTCCCGCCTTTGTGTCCTCAGCCTTCCTGCCCCTT CTTCCCTCCCCCCCACGGCAGGGCTCGGTCATGCTGGTGGTGACGTGCGT GCGAGGGGTAGGCAATGGCATACACGCCGTCTATGCACATGTACGTCCAC CGTCCCTTCCTCCCTCCCACCCACCCTCCCTCCCTCCCGTCCTCCCTCTC TCGCAATATCCTCCTTCTCGTCATCATCCGTCAAACCACCTAATTAGCCC TCCCTCCTTCCCTCCCTCCTTCCCTCCCTCCTTCCCTCCCTCCCTCCCCC CCTCCCTTCCAGATTATGGCCACTCTCTCCTACTTCCTCCGTCTGGGTCT CGCCCTCTGGCGTGAGCTCCGATCCCTCTCCCTTCGTGAGCTCGTCCGTG CCCTCCTCCTCCTCCTCACCGACAAACTCGAACGTGATGTCACGGGACGG GTACGTCCGCCGCCCCTCCCTCCCTCCCTCCTTCCGCCCCTCCCTCCCTT TCCTCCCCCTCCACCACTCACACTCCCGTCCCTCCGGCCGTCCCTCCCTC CCTCCCTCCTCCAGGAAAGCAGCAGTATGGGCTCTCGGTCCTCCTCGCAC CACGGCTTAGGCCTTGGTGGCTCGTCCAAGGGCCCCCTCCTCGGCTCGGC TGTCCTCAAAATGCCTTCCTTCTTCAATTCGTTCAAAGTACGCCCGCCCG CCCGCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCACTTTCCCTCTTCTT GGTCGAGCGTTCGACTCATCTTCTCCCACCCTCCCTCCCTCCCTCCCTCC CTCCCTCCCTCTGTAGGAGCTGGACGAGCCCGCACAAGGCGAGGACGAAG CCGGTGAACCCTTTGCTTTCCTCTCAGGTACCTCCCTCCCTCCCTCCCTC CCTCTTTCCCTCCCTCCCTCTCTCCTCCTCCTCCGCCATGACAACCTGCG AGTCACTCCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCCCC CCCCCTCCTCCTCCTCCGCCATGACAACCTGCGAATCACTCCCCTCCCTC CCGCCCTCCCTCCCTCCCTCCCTCCCTCTCTCCCTCCCGCCCTCCCGCCC TCCCTCCCTCCCTCAGGCGCCATTCCCCAACTAAACGCCGGTCTCGGCCG TCCATCCTCCAAGATGGGCCTTGTAGTATCCTATAGGGAAAAGAACGAAA CCCTGTCCTCCCTGACCAAGCAGAAAGTCCGCCGCATGATGCACTACCAG GTGCGTGCATATATATATACACACACACATATGTATATATGTATTCATGT GTGTACGTATATATGTGTGTCTGTATATACATTTAATACCTCTCCATTCG CCTCCGTGCACAGTCCCTTCTCAAACCCCCTCCCTCCCTCCCTCCCTCCC TCCCTCCCTCCCTCCAGGTCCCCCTCAAGCCTTTCGAAGCCACCATCCGC TGTGCCAACAAGACGGCTCAGCTCGAGGACGATGATGGCACGTACACCGC CGGCGGAGGTAAGGCAGGCAGCCCCCTCCCTCCCTCCCTCCCTCTTTCCC TCCCTCCCTCCCTCTCACTGCTCATCCCTCCCCCCGCCCTTCTCTCTCGA ATGCCGGTCTCAATCTGTTCCTCTCACCGCTCCTCCCTCCCCCCCCACAG GCAGCAGCACCAGCACCTTGGACCGAGCCCCCTCCTCCTCCTTCCGGCGC TCCTCCTCCCTCTTCCCCTCCGTCATGTGCACCCCGCAGTCCTTCCCTCC TACCCCCATCTCCCGCGCCTGCGTCATGGCTCGCTTCTCTCAGTTCTCGG ACGACATCGTTTACCTGGCACGGGACCAGCTGCGGTTGGAAGAGCTCGGT ACGTCCCCTCCCTCCCTCCCTCCCTCCCTCCACCCCTCCCTTGCTTCGAG GGATGATCATGCTGCTCCTGCTACTGACGTCTGACACCCCCTTCCCTCCC TCCCTCCCTCCCTCCCTCCCTCCAGTCAAGGCCGACGACGACGTGACCAA GATGGCTGCCCAGTCCCTCAAGCAACAAGCCTGCCTCGCCGTCTTCAACT CGGAAGGTACGCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCTCTCCC TCCCTCCCTCCCTCCCTCCCTTCCTCCCTCCCCCCCTCCCTCCCTCCCTA ACCCTCCTTTCCCTCCATCTCACAGACACGGCCACCGGCATCGTCCTCTC CTGCGGGGGGCACTGCGCGACCAAGGCACGTCTATCTCCCCCTCCCTCCC TCCCTCCCTCCCTTCCTCCCTCCCTCCTCCCTTCCTCCAAGCCGCCAATT TATTCCCCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCT TCCCTCCTAGGTGGGCACCACGGGCCTCTACACCTCCACCCGGGCCATGG TTCCCATCATGCGCAATCGCCATGTGTTCTTCCAGGTACGACAAACACCT CCCTCCCTTCCTCTGTCCCCCCGCCCTCTTTCTCTCCACTCACCTCCCTC CCTCTATCCCGCACTCATTCTCTCCACTCACCTCCCTCCCTCCCTCCCTC CCTCCCTCCCCTCCTCCCTCCCTCCGCCCCCCCTCCAGATGTCCATCATG GCGGAGGAGTCTGCCGTCGCCTCCCTCTGCATCGGTTTATCCACCCCTGA GATGCCCCTCAACACCCTCGTAGGCTCCTGGAAGTACAGCATTGGCTTTT GCTCCACAGGCCAGGTACCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCC CTACCTCTATCGTTTTCGACCCAACGGACTGATACACCCTCCCTCCCTCC CTCCTTCCCTCCCTCCCTCAGATTCTGGTGGGCTCTCGCTGGTACGGCAG TTCCACAAAACAGTATCGCTTCGGGTGCGTTCTCTCTCCCTCCCTCCCTC CCTCCCTCCCTCCTCTGGGCTTCAGGTTCTGTCAATTCTCACCCCTCCCT CCCTCCCTCCCTCCCTCCCTCCCTCCCTCTCTTTTTCTAGGTGTGGGTGC ACCATCGGTGTTCTCATCCACATAGACGAGTGCCGCTCTTCTGAGTCGTG GGACGGCGAGCTCGGTGCGTCCCTCCCTCCCTCCCTCCCTCCTTCCCTCC ACACTGTCACCTCACTGCTGCTCCCTCCCTCCCTCCCTCTCTCCCTCCTT CTCTCCCTCCCTCCACTGTCACCTCACTGCTGCTCCCTCCCTCCCTCCCC CTCTCCCTCACCCCCCCCTCCCTCCACGGTCATCTCACTGCTGCTTCCTA CCTTCCCTCCCTCCCCCCCTTCCTCCCCCCCTCCCTCCCTCTCCAGTCGA GGCCTCCCTCAAATTTTCGGTCAATGGCATGCCCGTGCTGCTTGACGCAA CCGATGTACGTCCTTCCCTCCCTCCCTCCCCCCCTTCCTCTCTTTCTTCC TCCCTCCTCCAAGCATTCCACCCACCCCTCCTTCCTTCCTTCCCTCCCTT CCTCCCTCCCTCCCTCCCTTTCTTCCTCTTTCCAGGGCCACCCCGGCGGC GACGTGACTCCCCTCTTCATCCCAAAGGATGACGATATATATCCCACACT CACCCTCCACTCGCCCAGCACACAAGTCCTGGGCCGCTTTTGCGCAGCCG ATATCCTGCATCCGCATCGGTAAACAAGCCCTCCTTCCCTTCCTCCCTCC CTCCAATCCTCCCTCCATCCTTCTTCCCATCCGTGCCCCCTTTTTTCGCG TCCTCGCTAATTCCTTCCTCCCTCCCTCCCTCCCTCCCTCCCTACCCAGG TCCCTGGTCGGGGCGCCTCTTGGAGTGCCTGTGTATGCTCTGGATGGGAG TGTCATCCTCAAGCCCGATCAGGACGTGGGAACCAGCAATATATAGGGAG GAAGGGAGGAGCGTGTTGCCGGAAAGAGGGTGGCATATCGATTTGTTAAT GTTGACTTCCATTCTTAAAAGACAGGGGGGAAAGGAAGGAAGAGAATGAG GGAGGACAGAAGGCATGTGTATCATTTGTATGTGAGAGCGGAGGGTGTGT GAGTGGTTGTGTGAGTGGGGAGGACGGCCGAGAGGGGAGGAATGGAAGAA GGGAGGGGGGAAGGTGAATGCAGGGAGGGTAGATATCGGAGCATTCTGCA CATGAGCGCCTCTCTTTTCGTGAAGAGGAAACGATAGATATCTCATGGAG AGGGGCGGAATGGGGAGAGGGGAAAAAAGGCGACACGGCACTTGTAGTAG TATGAGGACGAGGAGGAGAAAGTGGAGGGGGAGTAGGAGGAGAGGAGGAG GCGGAGGAGAATTAGAAAACGAGGACAAGGGGAAGAAAAAGTAGAGGAAG GAGAAGGAGAAGGCGGAGGAGAAGTGGGGGAGTGTCATAAGGCGCTTTCA AGCAACAGCAGCAGCAGCAGCAGTAGCAGATGGAAGCAGAATATCCTGGA TTTGTGAGAAATCTTGTGTGCGCACTTGGTCTTTTTTTGGAAAAAGTTAT TAATTTATATCGGCAGATAATGTGCATGTTGCTTCGAAACACCCCCCCGA AAACGTCGCCGAGTACATAAATTATTTGCGCGAAAAAGGTGTTAAAAAAA AGCTACCAACCATAAAGATATTTGGAAAG
back to top

Coding sequence (CDS) from alignment at chr7:116385..122713-

>NO07G00300.1 ID=NO07G00300.1|Name=NO07G00300.1|organism=Nannochloropsis oceanica|type=CDS|length=2346bp|location=Sequence derived from alignment at chr7:116385..122713- (Nannochloropsis oceanica)
ATGAAGGCCATGAAGGCCGCCCTGGGGAGCGTGGGCGGCAAGAAGGAGAG
GCAACAGCAGCAGCAACGACAACAACAACAACTACAGCAGCTGCAACACC
AGCAACAACAAGAAGCGGCAGCGGCTGCCGTCCTTGAGGCTCCATCTCCT
TCTCTGTCTCCCCCCTTGCCGCCTACCGTCCTACTGCACTCGATGCCTCT
GTCCGTGCCCATGACGATGGAAGAGGGCAAGGGCGAAGGGGTGGGGGAGG
AGCAGCAGCAGCAGCACCAGGGTGGCATACAGGTAGATGTTGTGGAGGAA
GTGGAACAGCAGCAATCGCCGCTGCTCTCCACGCCTCTTCCTCCGCCCCC
CCTTGTGGCGCCTCCTCCCTTGGTCTCAGCTTCCGGTGAAAGCAAAAGAG
GGGATAGGCGGGAGGATGAGGAGGAAATTTGGAGTGGGGGCAGTGAAGAG
GAGCCATACTTTACCTTTTCGCCCTCATCTTTGCCTCCCGAGTGCTACGA
CACCGTGGACGGAGGCCGAGCGGGGTCTTCATGCCCCTCCTGGGTGGGAA
GCAGTACTACCTACGATCCTGCCCAGCCCTTCGCCCCCTATGGCATTGCC
GAGCGCATCGCCTCCTTCCTGAGTGTGAAGGATATAGCCGCCTACCTCGC
CCTGGATGAGAAGGCCCAGTGGGGGTATGAGAGCTACACGACCATTCGTG
ACATTCTGGACTACCTCCTTGGCTCCCTCTCCCTCCTTCGGCTCCTCGAG
TGGGGCCTCGGGACCGCCGGTCGTCTGGCCCACGGCTCGGTCATGCTGGT
GGTGACGTGCGTGCGAGGGGTAGGCAATGGCATACACGCCGTCTATGCAC
ATATTATGGCCACTCTCTCCTACTTCCTCCGTCTGGGTCTCGCCCTCTGG
CGTGAGCTCCGATCCCTCTCCCTTCGTGAGCTCGTCCGTGCCCTCCTCCT
CCTCCTCACCGACAAACTCGAACGTGATGTCACGGGACGGGAAAGCAGCA
GTATGGGCTCTCGGTCCTCCTCGCACCACGGCTTAGGCCTTGGTGGCTCG
TCCAAGGGCCCCCTCCTCGGCTCGGCTGTCCTCAAAATGCCTTCCTTCTT
CAATTCGTTCAAAGAGCTGGACGAGCCCGCACAAGGCGAGGACGAAGCCG
GTGAACCCTTTGCTTTCCTCTCAGGCGCCATTCCCCAACTAAACGCCGGT
CTCGGCCGTCCATCCTCCAAGATGGGCCTTGTAGTATCCTATAGGGAAAA
GAACGAAACCCTGTCCTCCCTGACCAAGCAGAAAGTCCGCCGCATGATGC
ACTACCAGGTCCCCCTCAAGCCTTTCGAAGCCACCATCCGCTGTGCCAAC
AAGACGGCTCAGCTCGAGGACGATGATGGCACGTACACCGCCGGCGGAGG
CAGCAGCACCAGCACCTTGGACCGAGCCCCCTCCTCCTCCTTCCGGCGCT
CCTCCTCCCTCTTCCCCTCCGTCATGTGCACCCCGCAGTCCTTCCCTCCT
ACCCCCATCTCCCGCGCCTGCGTCATGGCTCGCTTCTCTCAGTTCTCGGA
CGACATCGTTTACCTGGCACGGGACCAGCTGCGGTTGGAAGAGCTCGTCA
AGGCCGACGACGACGTGACCAAGATGGCTGCCCAGTCCCTCAAGCAACAA
GCCTGCCTCGCCGTCTTCAACTCGGAAGACACGGCCACCGGCATCGTCCT
CTCCTGCGGGGGGCACTGCGCGACCAAGGTGGGCACCACGGGCCTCTACA
CCTCCACCCGGGCCATGGTTCCCATCATGCGCAATCGCCATGTGTTCTTC
CAGATGTCCATCATGGCGGAGGAGTCTGCCGTCGCCTCCCTCTGCATCGG
TTTATCCACCCCTGAGATGCCCCTCAACACCCTCGTAGGCTCCTGGAAGT
ACAGCATTGGCTTTTGCTCCACAGGCCAGATTCTGGTGGGCTCTCGCTGG
TACGGCAGTTCCACAAAACAGTATCGCTTCGGGTGTGGGTGCACCATCGG
TGTTCTCATCCACATAGACGAGTGCCGCTCTTCTGAGTCGTGGGACGGCG
AGCTCGTCGAGGCCTCCCTCAAATTTTCGGTCAATGGCATGCCCGTGCTG
CTTGACGCAACCGATGGCCACCCCGGCGGCGACGTGACTCCCCTCTTCAT
CCCAAAGGATGACGATATATATCCCACACTCACCCTCCACTCGCCCAGCA
CACAAGTCCTGGGCCGCTTTTGCGCAGCCGATATCCTGCATCCGCATCGG
TCCCTGGTCGGGGCGCCTCTTGGAGTGCCTGTGTATGCTCTGGATGGGAG
TGTCATCCTCAAGCCCGATCAGGACGTGGGAACCAGCAATATATAG
back to top
Synonyms
Publications