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Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
chr7 | genome | chr7:95609..99934 - |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
BLAST of NO07G00220.1 vs.
Match: EWM27367.1 (mannose-binding 2 [Nannochloropsis gaditana]) HSP 1 Score: 489.2 bits (1258), Expect = 1.400e-134 Identity = 229/295 (77.63%), Postives = 256/295 (86.78%), Query Frame = 0
Query: 15 GAGRSGVILVVACLMALATMMVGVGGEMMEAHTFIAPFNDVQVDGKRLVSKDWTSGGETQVNQNFVRLTPDRQSKRGALWSHNPLGVDAFTATLKFRMHGQGKKFFGDGIAFWITQNPYWAEGDVHGVSHAFTGVGVAFDTFKNTEHGARHRDVAVFINDGSRSREDVIGGFDGCDASLRYHGERADFSVTNSSRAKVTLEGTTFSVQIDPRGNGNWFQCTTVDLAPYNLPENWLRKAHLGLTATTGQLADNHDVISLHTFNDLGLHPEADELVVTPKFGRGVDISVEERLDRVE 310
G RS L+ M M+ V GE+M +H+F APFNDVQVDGKR VS+DW+ GETQVNQNFVRLTPDRQSK GALWSH LGVDA T TLKFR+HGQGKKFFGDGI FW+ ++PYW EGD+HGVSHAF GVGVAFDTF+NTEHG RHRDVAVF+N+G RSRE+V+ GFDGCDAS+RYHGERADFSVTNSSRAK+T+EG T SVQIDPRG GNWFQCTTVDL+ YNLPE+WLRKAH+GLT TTGQLADNHDVISLHTFNDL +HPEAD+L+VTPKFGRGVD+SVEERLDRVE
Sbjct: 6 GDARSESRLLCLVWMCCLAMIGIVSGELMLSHSFSAPFNDVQVDGKRFVSRDWSPAGETQVNQNFVRLTPDRQSKIGALWSHKALGVDAVTMTLKFRIHGQGKKFFGDGIGFWVMESPYWQEGDLHGVSHAFVGVGVAFDTFRNTEHGTRHRDVAVFVNNGDRSREEVLTGFDGCDASIRYHGERADFSVTNSSRAKLTIEGNTLSVQIDPRGQGNWFQCTTVDLSTYNLPEHWLRKAHVGLTGTTGQLADNHDVISLHTFNDLDVHPEADDLIVTPKFGRGVDLSVEERLDRVE 300
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO07G00220.1 ID=NO07G00220.1|Name=NO07G00220.1|organism=Nannochloropsis oceanica|type=mRNA|length=2483bp ATGGCTAACGCCTCTGTCGACCCTTAGGAGGGTAGTTGTGGATGGGTGTG GAAAGAGGGGCAGGGCGTGAGGGGAAGAATGTCTGCAAGTCAAGCGATCG CATCTTTTCCTTCCTCTTGGTCTAGTTGAGGGGACGCCTGCAGCAAGTCG TGTCTAACATTTGGACGATGCCACACCACAATTCATCCGCCATCATGACC ACCAGTCCCGTAATGCCATGGACACAGGCGGTCCTTGCCCGTGAGGAGGG CATTGTGTGTCTGGTTTCCCCGTGGGACGAGAAGACAAAATAATGCGCAC AAACTATCATCGCTATCTGGTCACGCTCTGTGGGTGCCTCTGTCCTCCCG CGGCAACACACGACAACGCTTCCCTCCCTTACGATCCCACATCCAAGGCA GCACGAGACTACCCTACCGGAGCTCCTCGTCTTTTCCGGGGCTGTAGTGC TTGCTGCATGGCTTCTAGACACACACCACTCGCTCCCCTTCCCATTGTCA TCAATGCCATGGCCTGAGGCTTCCGTCTACGTGCCCATACATCCACGACG CTTTGCTTCACTCCTCCACGATGGACGCAGCTGCCACGCTGGATCGATCG TCAGCACACGTTCGACTGAAGAGGATGGAGGAGACGGTGGTGGGAACAGA GCTAGCTTTCTTTTGCTCTTACTGAACATGACGATGGTGTGATGCCGCTC CCTTAGTGCGAAGTTCTTGCTCCACTCACGCCACCGACCCACCCATATCC ACAGATCCCGCTCCGCTGCACGTACAAGACACGCATTCACACCCGTACGG AGGCAGAGTAGTCATGGTCGCAGGTGGCGGGGGAAGAAGAGGAGGAGCAC GAGCAGGAGCAGGGAGATCTGGCGTCATCCTTGTGGTGGCGTGCCTCATG GCACTGGCGACGATGATGGTGGGGGTAGGAGGAGAGATGATGGAGGCGCA CACGTTCATAGCACCTTTTAATGACGTGCAGGTAGATGGAAAGCGCCTTG TAAGCAAGGACTGGACATCGGGTGGCGAGACGCAGGTCAACCAAAACTTC GTCCGCCTCACCCCTGACCGGCAGTCGAAGAGGGGAGCCCTCTGGTCCCA TAATCCCCTGGGGGTGGATGCTTTCACCGCCACTCTTAAGTTCAGGATGC ACGGCCAGGGTAAGAAGTTCTTCGGGGATGGCATCGCGTTTTGGATCACT CAGAACCCTTATTGGGCCGAGGGGGATGTGCACGGCGTCTCTCATGCCTT CACTGGCGTGGGGGTTGCTTTTGACACCTTCAAGAACACGGAGCACGGTG CGCGGCATCGGGACGTCGCTGTCTTTATTAATGATGGGAGCAGGAGCCGG GAAGACGTCATTGGTGGCTTTGACGGATGCGACGCCTCCCTTCGCTACCA CGGCGAGCGGGCGGACTTCTCTGTCACAAACTCCTCCCGAGCCAAGGTCA CCCTCGAGGGCACCACCTTCTCGGTCCAGATCGATCCCCGCGGAAACGGC AACTGGTTTCAATGCACCACCGTCGACCTCGCCCCCTACAACCTACCAGA GAACTGGCTCCGCAAGGCCCACCTGGGCCTCACAGCCACCACCGGCCAGC TCGCCGACAACCACGACGTCATCTCCCTCCACACATTCAACGATCTCGGA CTCCATCCGGAGGCGGACGAGCTGGTGGTCACGCCGAAATTCGGCCGTGG TGTCGATATCTCCGTCGAAGAACGCTTGGATCGCGTAGAGGACATGATGT CTCAAGTCCTCCACCTCCTGGACGAGATGCAGGCCCACAACGAACATCAG CTTGTGGCGATCCAGGACCACATTTCCAACACCATCCGCAAACTCCAGTC GCAGGAAGACTCCTCCGAGGACCGCATCGCCGCTCTAGAGCACGAGCTGT ACAAGAGCGTGGAGGGCACCGTTGAGGAGCGCCTTAAGTCAGTCGAAGGA TCTATTTCCAACGCGATGGCTCACCGTGTAGCCGCCATCGAGACCAACCT CCACTCCAAGGTGCAAAGCGTCATTGCCGCCGCCGGAGGAGGAGAAATGG GTGGCGGAGGTGGAGGTGGACGGTGGACACTAATTGTGTTTTGTCTCGTG CTGGGCTTATGCATGTTCCAGATATACCGGTGGGTGGAACGATTGAAGAA GAGCCACATTTTGTGAGGGGGAGGGAGGGAAGGAGGGCAGAGGAAGAAGG AAGAAGATGTTTTGAGTTTATGTCCTTTTTTACACTTTCCTTCAGCCTTT GAGATCGTTCACTGAAACACGGAGAGAGTAAAGTAGACATGGAGGAAGAG ACGGGGGGAGAGGGAGGGGGGGGAGCGAGAATGAGAGGATTTGAACCTAG ATATAAAAAGTTGTTGTTGTTTAGGAAGATGATGAGAGAACCGAAAAGTA GGAGATCAATACTACCCCCATAGAGGTGAGAGTTAGCCACTCAAGTAGAC GAAGGAAATTACCATGCATTCCTAGAACGACAA back to topprotein sequence of NO07G00220.1 >NO07G00220.1-protein ID=NO07G00220.1-protein|Name=NO07G00220.1|organism=Nannochloropsis oceanica|type=polypeptide|length=451bp MVAGGGGRRGGARAGAGRSGVILVVACLMALATMMVGVGGEMMEAHTFIA PFNDVQVDGKRLVSKDWTSGGETQVNQNFVRLTPDRQSKRGALWSHNPLG VDAFTATLKFRMHGQGKKFFGDGIAFWITQNPYWAEGDVHGVSHAFTGVG VAFDTFKNTEHGARHRDVAVFINDGSRSREDVIGGFDGCDASLRYHGERA DFSVTNSSRAKVTLEGTTFSVQIDPRGNGNWFQCTTVDLAPYNLPENWLR KAHLGLTATTGQLADNHDVISLHTFNDLGLHPEADELVVTPKFGRGVDIS VEERLDRVEDMMSQVLHLLDEMQAHNEHQLVAIQDHISNTIRKLQSQEDS SEDRIAALEHELYKSVEGTVEERLKSVEGSISNAMAHRVAAIETNLHSKV QSVIAAAGGGEMGGGGGGGRWTLIVFCLVLGLCMFQIYRWVERLKKSHIL * back to topmRNA from alignment at chr7:95609..99934- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO07G00220.1 ID=NO07G00220.1|Name=NO07G00220.1|organism=Nannochloropsis oceanica|type=mRNA|length=4326bp|location=Sequence derived from alignment at chr7:95609..99934- (Nannochloropsis oceanica) ATGGCTAACGCCTCTGTCGACCCTTAGGAGGGTAGTTGTGGATGGGTGTG
GAAAGAGGGGCAGGGCGTGAGGGGAAGAATGTCTGCAAGTCAAGCGATCG
CATCTTTTCCTTCCTCTTGGTCTAGTTGAGGGGACGCCTGCAGCAAGTCG
TGTCTAACATTTGGACGATGCCACACCACAATTCATCCGCCATCATGACC
ACCAGTCCCGTAATGCCATGGACACAGGCGGTCCTTGCCCGTGAGGAGGG
CATTGTGTGTCTGGTTTCCCCGTGGGACGAGAAGACAAAATAATGCGCAC
AAACTATCATCGCTATCTGGTCACGCTCTGTGGGTGCCTCTGTCCTCCCG
CGGCAACACACGACAACGCTTCCCTCCCTTACGATCCCACATCCAAGGCA
GCACGAGACTACCCTACCGGAGCTCCTCGTCTTTTCCGGGGCTGTAGTGC
TTGCTGCATGGCTTCTAGACACACACCACTCGCTCCCCTTCCCATTGTCA
TCAATGCCATGGCCTGAGGCTTCCGTCTACGTGCCCATACATCCACGACG
CTTTGCTTCACTCCTCCACGATGGACGCAGCTGCCACGCTGGATCGATCG
TCAGCACACGTTCGACTGAAGAGGATGGAGGAGACGGTGGTGGGAACAGA
GCTAGCTTTCTTTTGCTCTTACTGAACATGACGATGGTGTGATGCCGCTC
CCTTAGTGCGAAGTTCTTGCTCCACTCACGCCACCGACCCACCCATATCC
ACAGATCCCGCTCCGCTGCACGTACAAGACACGCATTCACACCCGTACGG
AGGCAGAGTAGTCATGGTCGCAGGTGGCGGGGGAAGAAGAGGAGGAGCAC
GAGCAGGAGCAGGGAGATCTGGCGTCATCCTTGTGGTGGCGTGCCTCATG
GCACTGGCGACGATGATGGTGGGGGTAGGAGGAGAGATGATGGAGGCGCA
CACGTTCATAGCACCTTTTAATGACGTGCAGGTAGATGGAAAGCGCCTTG
TAAGCAAGTACGTTATAGGGTTGGGGAGGGGGAAGAGGGACGAAGGGGTC
GGGGGAGAGGCATGAATAACATGAGGGCACCACTTGCCTTCAAGCATCCT
CTCTCCAGGCAATCCTGACACGCTCTCCTTTGAAAAGGCATTCCCTGCAC
TCATCTCCTTCTTCTTTCCCACTTTCGGCACTCCTTCATTCGTTCTTTTG
CCCTGCCAGGGACTGGACATCGGGTGGCGAGACGCAGGTCAACCAAAACT
TCGTCCGGTACGTTAGGACGGATGGATGGAGGGACGGAGGGAGGGAAGGG
AGGAGGGAGGGCGGGAGAGCAGGCAAGAGGGAAGGTAGAAAAGAAAAGTA
TAGAAGTATTATACGTGGTCGTCAAGGTGAGAACTCCTCTCGCCTGGGGT
GGAAGAGGGGGGAGAGGAATATGCACACGTGCCTCTCTTCCAATGTTTGT
CGTTACCCGCCTTCCCCACGGCGTTTCTCCTAATGGCGTATTCTCATCGC
TGTGTCATTGCCTTCTCCCCATCCTCACGGCATCCCTTCCCCCCTCCCTC
CCCCACAGCCTCACCCCTGACCGGCAGTCGAAGAGGGGAGCCCTCTGGTC
CCATAATCCCCTGGGGGTGGATGCTTTCACCGCCACTCTTAAGTTCAGGA
TGCACGGCCAGGTACGTTAGGGAGGGGGGAAGGGAGGGAGGGAGGGAGGG
TGACTGAAGGATGTATCCTTCAACAACACAGATCCTCTCATCCACCCTCC
CTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCTTTGACAGGGTAAGAAGTT
CTTCGGGGATGGCATCGCGTTTTGGATCACTCAGAACCCTTATTGGGCCG
AGGGGGATGTGCACGGCGTCTCTCATGCCTTCACTGGTGCGTCCTCCCTC
CCTCCCTCCCTCCCTCCCTCCCTCCCTCCTTCTGTCCCTCCCTCCCTCCC
TCTTTCCTTCCTTCCTCTTTGGTTCGATTAAGCCGACTTGGCCATTCCCC
TCCCTTCCTCCCTCCCTCCCCTCCAGGCGTGGGGGTTGCTTTTGACACCT
TCAAGAACACGGAGCACGGTGCGCGGCATCGGGACGTCGCTGTCTTTATT
AATGATGGGAGCAGGAGCCGGGAAGACGTCATTGGTGGCTTTGACGGATG
GTGCGTCCCCTCCCCCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCC
TTGTCCCACTGCCCCTTCCCTTCTTGACCCGGTCTTCTTCCCCAAGCACT
CATCGTTATTGCCTGCCCTCCCTCCCTCCCTCCCTCCCCAGCGACGCCTC
CCTTCGCTACCACGGCGAGCGGGCGGACTTCTCTGTCACAAACTCCTCCC
GAGCCAAGGTCACCCTCGAGGTACGTCCCACCCCTCCCTTCTTCCCTCCC
TTCCTCCCTCCCTCCCTCCCTCCCCTTTTCCCCTGCTTGCTGCCATACCT
CACCCTCCTTTGCTCCCTCCCTCTCTCCCTCCCTCCCTCCCTCTCTAGGG
CACCACCTTCTCGGTCCAGATCGATCCCCGCGGAAACGGCAACTGGTTTC
AATGCACCACCGTCGACCTCGCCCCCTACAACCTACCAGAGGTAGGCCTC
CCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCATGCACCACCGTCGACC
TCACCCTCTCCACCTTTCTGGAGGCATGCTTTTCCCCGCCCCCTCCCTCC
CTCCCTCCCCCTCATTTCCCTTCTTTCCCCTTCCCTCCCCCCTCCCTCCC
TCCCTCCAGAACTGGCTCCGCAAGGCCCACCTGGGCCTCACAGCCACCAC
CGGCCAGCTCGCCGACAACCACGACGTCATCTCCCTCCACACATTCAACG
ATCTCGGACTCCATCCGGAGGCGGACGAGCTGGTGGTCACGCCGAAATTC
GGTACGCCCTCCTTCCCTCCCTCCTTCCCTCCCTCTAAAAAAATTGGCTG
TTGTTTCACCCACCCACTCGCCTAACACACCACTCCCTCTCTCTCTCTCA
CACACACACACACACTTAAGGCCGTGGTGTCGATATCTCCGTCGAAGAAC
GCTTGGATCGCGTAGAGGTACGTCCGCCCCTCCCCTCCTTCCCTCCTTCA
TTCTCTCCCATCCTCTCCCCTTCATGTTTTGGCCTTCTCAATCCTCTATC
ACCTCCCCCTCCCATCTTCCTTTCCTCCCTCCCTCCCTTCCCCCTTCCCT
CAGGACATGATGTCTCAAGTCCTCCACCTCCTGGACGAGATGCAGGCCCA
CAACGAACATCAGCTTGTGGCGATCCAGGTAGGGAGGGAGAGAGGGAGGG
AAGGAGGGAGGGAGGCAGCGACCGTCTTGGTCTTCTCCGTTTACCCCGTC
ATCTCGTACTCATTCCCTCCCTCCCTTCCTCCCTCCCTTCCTCCCTCCCT
TCCTCCCTCCTTCCCGTAGGACCACATTTCCAACACCATCCGCAAACTCC
AGTCGCAGGAAGACTCCTCCGAGGACCGCATCGCCGCTCTAGAGCACGAG
CTGTACAAGAGCGTGGAGGGCACCGTTGAGGAGCGCCTTAAGTCAGTCGA
AGGATCTATTTCCGTACGTCTCTTGTTGCTGTCCTCTTTATGCTTCCTTT
TCTCCCTTCCTGCTACCCTCCCTCCTACCCACCGAGCCTTTCCTCTTTCG
TCTTCCTTCCATCCATCTCCTATCTCCCGCCCGCGCGATCCGCCCTCCCT
CTCCAGCAGTCAGTCTCTACCGGCGACAAACACCAAAAACTCACACACCG
ACTTCTCTCCTCCATTTTCTCTCCCTCCCTCCCTTGCTCTCTGTCTTTCC
AGAACGCGATGGCTCACCGTGTAGCCGCCATCGAGACCAACCTCCACTCC
AAGGTGCAAAGCGTCATTGCCGCCGCCGGAGGAGGAGAAATGGGTGGCGG
AGGTGGAGGTGGACGGTGGACACTAATTGTGTTTTGTCTCGTGCTGGGCT
TATGCATGTTCCAGATATACCGGTGGGTGGAACGATTGAAGAAGAGCCAC
ATTTTGTGAGGGGGAGGGAGGGAAGGAGGGCAGAGGAAGAAGGAAGAAGA
TGTTTTGAGTTTATGTCCTTTTTTACACTTTCCTTCAGCCTTTGAGATCG
TTCACTGAAACACGGAGAGAGTAAAGTAGACATGGAGGAAGAGACGGGGG
GAGAGGGAGGGGGGGGAGCGAGAATGAGAGGATTTGAACCTAGATATAAA
AAGTTGTTGTTGTTTAGGAAGATGATGAGAGAACCGAAAAGTAGGAGATC
AATACTACCCCCATAGAGGTGAGAGTTAGCCACTCAAGTAGACGAAGGAA
ATTACCATGCATTCCTAGAACGACAA back to topCoding sequence (CDS) from alignment at chr7:95609..99934- >NO07G00220.1 ID=NO07G00220.1|Name=NO07G00220.1|organism=Nannochloropsis oceanica|type=CDS|length=1353bp|location=Sequence derived from alignment at chr7:95609..99934- (Nannochloropsis oceanica) ATGGTCGCAGGTGGCGGGGGAAGAAGAGGAGGAGCACGAGCAGGAGCAGG GAGATCTGGCGTCATCCTTGTGGTGGCGTGCCTCATGGCACTGGCGACGA TGATGGTGGGGGTAGGAGGAGAGATGATGGAGGCGCACACGTTCATAGCA CCTTTTAATGACGTGCAGGTAGATGGAAAGCGCCTTGTAAGCAAGGACTG GACATCGGGTGGCGAGACGCAGGTCAACCAAAACTTCGTCCGCCTCACCC CTGACCGGCAGTCGAAGAGGGGAGCCCTCTGGTCCCATAATCCCCTGGGG GTGGATGCTTTCACCGCCACTCTTAAGTTCAGGATGCACGGCCAGGGTAA GAAGTTCTTCGGGGATGGCATCGCGTTTTGGATCACTCAGAACCCTTATT GGGCCGAGGGGGATGTGCACGGCGTCTCTCATGCCTTCACTGGCGTGGGG GTTGCTTTTGACACCTTCAAGAACACGGAGCACGGTGCGCGGCATCGGGA CGTCGCTGTCTTTATTAATGATGGGAGCAGGAGCCGGGAAGACGTCATTG GTGGCTTTGACGGATGCGACGCCTCCCTTCGCTACCACGGCGAGCGGGCG GACTTCTCTGTCACAAACTCCTCCCGAGCCAAGGTCACCCTCGAGGGCAC CACCTTCTCGGTCCAGATCGATCCCCGCGGAAACGGCAACTGGTTTCAAT GCACCACCGTCGACCTCGCCCCCTACAACCTACCAGAGAACTGGCTCCGC AAGGCCCACCTGGGCCTCACAGCCACCACCGGCCAGCTCGCCGACAACCA CGACGTCATCTCCCTCCACACATTCAACGATCTCGGACTCCATCCGGAGG CGGACGAGCTGGTGGTCACGCCGAAATTCGGCCGTGGTGTCGATATCTCC GTCGAAGAACGCTTGGATCGCGTAGAGGACATGATGTCTCAAGTCCTCCA CCTCCTGGACGAGATGCAGGCCCACAACGAACATCAGCTTGTGGCGATCC AGGACCACATTTCCAACACCATCCGCAAACTCCAGTCGCAGGAAGACTCC TCCGAGGACCGCATCGCCGCTCTAGAGCACGAGCTGTACAAGAGCGTGGA GGGCACCGTTGAGGAGCGCCTTAAGTCAGTCGAAGGATCTATTTCCAACG CGATGGCTCACCGTGTAGCCGCCATCGAGACCAACCTCCACTCCAAGGTG CAAAGCGTCATTGCCGCCGCCGGAGGAGGAGAAATGGGTGGCGGAGGTGG AGGTGGACGGTGGACACTAATTGTGTTTTGTCTCGTGCTGGGCTTATGCA TGTTCCAGATATACCGGTGGGTGGAACGATTGAAGAAGAGCCACATTTTG TGA back to top
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