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Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
chr7 | genome | chr7:86236..88859 - |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO07G00190.1 ID=NO07G00190.1|Name=NO07G00190.1|organism=Nannochloropsis oceanica|type=mRNA|length=2373bp ATGCCCGCTTCCTCTTCATCTCCTCTCCCTCGCTGTCCTCTTCGTCGCCG CGGTCTCAATCCCTCCTCTGTCTCAGCTTCTTCTCCCGACCTCTCCTCCT CTTCCCTCCCTACACCCCGACCCACCGACTGGATCCCAGACCTAGAAGTC CTTCACACACGCTACATAGCCCCTCGTCCTCCCTGCTCCCCATACTTCCT CTTCTGTCTCGACCAAAAAGAGGGGGTGCGTGCCACCCTTCCCGGTGGAG GGGGGCGAGACAGGGACCCCCGTGCTGTGATCGTCCGCTTGAAAGAACTA TGGAAAACTTGTCCAGACGCCCAACGAGCCGTCTATGTCACCAAGGCCAT GTGGGACCGCGAAAGATATAGTCGAGAATTAGATGGGTGGAAGCAGGCCG AGGCAGGAGCAAGGCGGAGGGAGGGAGGGAGGGAGGAAGTTTGGATGGGG GGGCATTGTCCTCCGAGGGGGATGATGGAGCCAAGCTCGCCATCGCCGCC CGCGAGAAAAGGCAATGAGGAGGAGGGAGGGGGTGACAGAGGTGCTGGAC AAGGGCAGAATCAAAACCACCGCCAGCAGCAGCAGCAGCAGCAGCAGCAG CAGCAGGCTTTGATCGCGTGTGCCAAGGAGGGGGACCTGAAGGGATTGCA GAGGGTGCTAGGGTGGGGAGGGGGGCAGGGAGCGAGGGAGGAAGGGAAGG GGCATGGCGAAGGGGTCGTGGATATAGATGCATGGGATGAGATGGAGGGG CTGACGCCATTATTGGCCGCGACATTATGGTCGGATTACGCAACAGTGGA TTTGTTAATGTCTTCCTCCCCCTCCCCCTCCCCCTCCTCCTCCTCCTCCT CCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTTCTCGTCGGCGTCCTTA CACGGAGTGAGGGGAGGGACGACAACAATAATGACAACACCAACATCAAC AGCAGTCATAGAGGGAAGGGGAGGACGAGGGGCCGACCCCCGGGTGGGCA CGCCGTTTGGAGGCATTACGCCCTGCCATGTGGCGGCTTTAAAGGACCCA TCGATGTTGCTCGTTCTCTTGGACCATGAGTGCACTGGTGGAAGCTGCAG CACTAGCAGTAGTAGCAGCAGCAACAGCAGCAGCTACTTTACGGCCGGCA TCAGTAGCAGTAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGC AGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAACAGCAGCAGCCGCAATAA GAACGAGACAAGTGCTCCCCCTGTTTCCCCCGACCAACCACTATCTCCTT CCTCCACCCCCATCTCCCTCCTCCCCTCCCTCCTCTCCGCCCTGGACTCC GACGGTCGCTCCCCGCTGCACTACGCGTGTTTGGGGGGAAACCCGCTCTG TGTCTCCATCCTTCTTGACCGAGGGGCAGGGCGGGAGGGCGAGAGGGACA GGTGGGGCTTGACGCCCTTGGAGCTGGCAATTAGAGAGAGGGTGCCCGAA ATAGTGGAGATTGAATCGTTGTTGCGGAGGGTGGTGGTGTTCAGAGGGAG TGAGGAAGGGAGGGAGGGAGTGGTGCCGGGAAAGGGGGTTAGGAGGGCAC GGCATGGCATGGGGGACTGGCGCAACAACAGCAGCAGCAGCAGTAGCAGC AGCAGCCAGAGTAGCATCACAAGCACCTCCGCTTCTTCCTCCTTCCCTTC CTCCGCTTCTTCCTCCTTTCCTCCTTCCTCCATTGCGCTACGAATTCCCA TTAACGGCAGGAGGGATAAGCCTCCTTCTGGTGCTGGGCAGGAGGGTGAC AGGGAGGACGGGAGGGAGGGCGGGAGGGACGACGTATTGATCGAGACAGC GGTGTGGTGCGATGCGAGGGAAAGTCAAAAGGAGAGGGAAGCGACGAGCA GGAGGATGGAGGAGGAGAGGAGATTGGCTGAGGCCCTTATGTCTAGGCGG GACGAGCACCATATGATGAAGAAGGAATCATTTATGTCAGGCTGGGGTCT GGGGGAGGGAGGGGGGGGGGGAGATGGGCCGCATGTGAGGACGAAGGGGA GGGAGAGGAAGACGGAAAATGCGGGGTTGTTTGCGCAGATGAGTGCGGAG GAGGAGGTGGAGGAGGGAGGGGTAGAGGGAAGGATGCTCCTGTCGAGAGT AGAAAGGGAGGAGCTGAAGGAGGGAGGGGAGGAGGGAGAACGAGGCCGCC TGATGACGGTGACGGTGGGTGCCCCAGGAGTAGACAATGGAGGGAGAGGA GGGGAGGGAGGGGGAGAGGGAGGAGAGGAGAGCTTGTTGCAGGTTTGGAC GAGGCGGGGGGCGGCAGCGGCGGCGGCGGCGGTGTTGGTGACATGTGCAC TGACCTTACCGGTGTGGTTGTAG back to topprotein sequence of NO07G00190.1 >NO07G00190.1-protein ID=NO07G00190.1-protein|Name=NO07G00190.1|organism=Nannochloropsis oceanica|type=polypeptide|length=791bp MPASSSSPLPRCPLRRRGLNPSSVSASSPDLSSSSLPTPRPTDWIPDLEV LHTRYIAPRPPCSPYFLFCLDQKEGVRATLPGGGGRDRDPRAVIVRLKEL WKTCPDAQRAVYVTKAMWDRERYSRELDGWKQAEAGARRREGGREEVWMG GHCPPRGMMEPSSPSPPARKGNEEEGGGDRGAGQGQNQNHRQQQQQQQQQ QQALIACAKEGDLKGLQRVLGWGGGQGAREEGKGHGEGVVDIDAWDEMEG LTPLLAATLWSDYATVDLLMSSSPSPSPSSSSSSSSSSSSSSSSFSSASL HGVRGGTTTIMTTPTSTAVIEGRGGRGADPRVGTPFGGITPCHVAALKDP SMLLVLLDHECTGGSCSTSSSSSSNSSSYFTAGISSSSSSSSSSSSSSSS SSSSSSSSSSNSSSRNKNETSAPPVSPDQPLSPSSTPISLLPSLLSALDS DGRSPLHYACLGGNPLCVSILLDRGAGREGERDRWGLTPLELAIRERVPE IVEIESLLRRVVVFRGSEEGREGVVPGKGVRRARHGMGDWRNNSSSSSSS SSQSSITSTSASSSFPSSASSSFPPSSIALRIPINGRRDKPPSGAGQEGD REDGREGGRDDVLIETAVWCDARESQKEREATSRRMEEERRLAEALMSRR DEHHMMKKESFMSGWGLGEGGGGGDGPHVRTKGRERKTENAGLFAQMSAE EEVEEGGVEGRMLLSRVEREELKEGGEEGERGRLMTVTVGAPGVDNGGRG GEGGGEGGEESLLQVWTRRGAAAAAAAVLVTCALTLPVWL* back to topmRNA from alignment at chr7:86236..88859- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO07G00190.1 ID=NO07G00190.1|Name=NO07G00190.1|organism=Nannochloropsis oceanica|type=mRNA|length=2624bp|location=Sequence derived from alignment at chr7:86236..88859- (Nannochloropsis oceanica) ATGCCCGCTTCCTCTTCATCTCCTCTCCCTCGCTGTCCTCTTCGTCGCCG
CGGTCTCAATCCCTCCTCTGTCTCAGCTTCTTCTCCCGACCTCTCCTCCT
CTTCCCTCCCTACACCCCGACCCACCGACTGGATCCCAGACCTAGAAGTC
CTTCACACACGCTACATAGCCCCTCGTCCTCCCTGCTCCCCATACTTCCT
CTTCTGTCTCGACCAAAAAGAGGGGGTGCGTGCCACCCTTCCCGGTGGAG
GGGGGCGAGACAGGGACCCCCGTGCTGTGATCGTCCGCTTGAAAGAACTA
TGGAAAACTTGTCCAGACGCCCAACGAGCCGTCTATGTCACCAAGGCCAT
GTGGGACCGCGAAAGATATAGTCGAGAATTAGATGGGTGGAAGCAGGCCG
AGGCAGGAGCAAGGCGGAGGGAGGGAGGGAGGGAGGAAGTTTGGATGGGG
GGGCATTGTCCTCCGAGGGGGATGATGGAGCCAAGCTCGCCATCGCCGCC
CGCGAGAAAAGGCAATGAGGAGGAGGGAGGGGGTGACAGAGGTGCTGGAC
AAGGGCAGAATCAAAACCACCGCCAGCAGCAGCAGCAGCAGCAGCAGCAG
CAGCAGGCTTTGATCGCGTGTGCCAAGGAGGGGGACCTGAAGGGATTGCA
GAGGGTGCTAGGGTGGGGAGGGGGGCAGGGAGCGAGGGAGGAAGGGAAGG
GGCATGGCGAAGGGGTCGTGGATATAGATGCATGGGATGAGATGGAGGGG
CTGACGCCATTATTGGCCGCGACATTATGGTCGGATTACGCAACAGTGGA
TTTGTTAATGTCTTCCTCCCCCTCCCCCTCCCCCTCCTCCTCCTCCTCCT
CCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTTCTCGTCGGCGTCCTTA
CACGGAGTGAGGGGAGGGACGACAACAATAATGACAACACCAACATCAAC
AGCAGTCATAGAGGGAAGGGGAGGACGAGGGGCCGACCCCCGGGTGGGCA
CGCCGTTTGGAGGCATTACGCCCTGCCATGTGGCGGCTTTAAAGGACCCA
TCGATGTTGCTCGTTCTCTTGGACCATGAGTGCACTGGTGGAAGCTGCAG
CACTAGCAGTAGTAGCAGCAGCAACAGCAGCAGCTACTTTACGGCCGGCA
TCAGTAGCAGTAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGC
AGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAACAGCAGCAGCCGCAATAA
GAACGAGACAAGTGCTCCCCCTGTTTCCCCCGACCAACCACTATCTCCTT
CCTCCACCCCCATCTCCCTCCTCCCCTCCCTCCTCTCCGCCCTGGACTCC
GACGGTCGCTCCCCGCTGCACTACGCGTGTTTGGGGGGAAACCCGCTCTG
TGTCTCCATCCTTCTTGACCGAGGGGCAGGGCGGGAGGGCGAGAGGGACA
GGTGGGGCTTGACGCCCTTGGAGCTGGCAATTAGAGAGAGGGTGCCCGAA
ATAGTGGAGATTGAATCGTTGTTGCGGAGGGTGGTGGTGTTCAGAGGGAG
TGAGGAAGGGAGGGAGGGAGTGGTGCCGGGAAAGGGGGTTAGGAGGGGTG
AGGGAGAGAGAGGGGGGGAGGAAGGGGAGGATGACGGCCGTTTGATTTTG
GAAAGGGAGCAGAAGCGGGTCAAGACAGTGAGCAGTGGGGGAGATCGAGG
AGGAGGAGGAGGGATGAAGGGGGGAGAGGAAGGGAGAGAGGGAGGGAGGG
AGGGAGGGGGGGGGGCTTGTCGACGATGGTGGGGTCGTTGGCATCTTGGG
CGATGGGGAAGCCTTCCTACCTACCTCCCTCCTCCTCTTCCTACAAAGCA
CGGCATGGCATGGGGGACTGGCGCAACAACAGCAGCAGCAGCAGTAGCAG
CAGCAGCCAGAGTAGCATCACAAGCACCTCCGCTTCTTCCTCCTTCCCTT
CCTCCGCTTCTTCCTCCTTTCCTCCTTCCTCCATTGCGCTACGAATTCCC
ATTAACGGCAGGAGGGATAAGCCTCCTTCTGGTGCTGGGCAGGAGGGTGA
CAGGGAGGACGGGAGGGAGGGCGGGAGGGACGACGTATTGATCGAGACAG
CGGTGTGGTGCGATGCGAGGGAAAGTCAAAAGGAGAGGGAAGCGACGAGC
AGGAGGATGGAGGAGGAGAGGAGATTGGCTGAGGCCCTTATGTCTAGGCG
GGACGAGCACCATATGATGAAGAAGGAATCATTTATGTCAGGCTGGGGTC
TGGGGGAGGGAGGGGGGGGGGGAGATGGGCCGCATGTGAGGACGAAGGGG
AGGGAGAGGAAGACGGAAAATGCGGGGTTGTTTGCGCAGATGAGTGCGGA
GGAGGAGGTGGAGGAGGGAGGGGTAGAGGGAAGGATGCTCCTGTCGAGAG
TAGAAAGGGAGGAGCTGAAGGAGGGAGGGGAGGAGGGAGAACGAGGCCGC
CTGATGACGGTGACGGTGGGTGCCCCAGGAGTAGACAATGGAGGGAGAGG
AGGGGAGGGAGGGGGAGAGGGAGGAGAGGAGAGCTTGTTGCAGGTTTGGA
CGAGGCGGGGGGCGGCAGCGGCGGCGGCGGCGGTGTTGGTGACATGTGCA
CTGACCTTACCGGTGTGGTTGTAG back to topCoding sequence (CDS) from alignment at chr7:86236..88859- >NO07G00190.1 ID=NO07G00190.1|Name=NO07G00190.1|organism=Nannochloropsis oceanica|type=CDS|length=2373bp|location=Sequence derived from alignment at chr7:86236..88859- (Nannochloropsis oceanica) ATGCCCGCTTCCTCTTCATCTCCTCTCCCTCGCTGTCCTCTTCGTCGCCG CGGTCTCAATCCCTCCTCTGTCTCAGCTTCTTCTCCCGACCTCTCCTCCT CTTCCCTCCCTACACCCCGACCCACCGACTGGATCCCAGACCTAGAAGTC CTTCACACACGCTACATAGCCCCTCGTCCTCCCTGCTCCCCATACTTCCT CTTCTGTCTCGACCAAAAAGAGGGGGTGCGTGCCACCCTTCCCGGTGGAG GGGGGCGAGACAGGGACCCCCGTGCTGTGATCGTCCGCTTGAAAGAACTA TGGAAAACTTGTCCAGACGCCCAACGAGCCGTCTATGTCACCAAGGCCAT GTGGGACCGCGAAAGATATAGTCGAGAATTAGATGGGTGGAAGCAGGCCG AGGCAGGAGCAAGGCGGAGGGAGGGAGGGAGGGAGGAAGTTTGGATGGGG GGGCATTGTCCTCCGAGGGGGATGATGGAGCCAAGCTCGCCATCGCCGCC CGCGAGAAAAGGCAATGAGGAGGAGGGAGGGGGTGACAGAGGTGCTGGAC AAGGGCAGAATCAAAACCACCGCCAGCAGCAGCAGCAGCAGCAGCAGCAG CAGCAGGCTTTGATCGCGTGTGCCAAGGAGGGGGACCTGAAGGGATTGCA GAGGGTGCTAGGGTGGGGAGGGGGGCAGGGAGCGAGGGAGGAAGGGAAGG GGCATGGCGAAGGGGTCGTGGATATAGATGCATGGGATGAGATGGAGGGG CTGACGCCATTATTGGCCGCGACATTATGGTCGGATTACGCAACAGTGGA TTTGTTAATGTCTTCCTCCCCCTCCCCCTCCCCCTCCTCCTCCTCCTCCT CCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTTCTCGTCGGCGTCCTTA CACGGAGTGAGGGGAGGGACGACAACAATAATGACAACACCAACATCAAC AGCAGTCATAGAGGGAAGGGGAGGACGAGGGGCCGACCCCCGGGTGGGCA CGCCGTTTGGAGGCATTACGCCCTGCCATGTGGCGGCTTTAAAGGACCCA TCGATGTTGCTCGTTCTCTTGGACCATGAGTGCACTGGTGGAAGCTGCAG CACTAGCAGTAGTAGCAGCAGCAACAGCAGCAGCTACTTTACGGCCGGCA TCAGTAGCAGTAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGC AGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAACAGCAGCAGCCGCAATAA GAACGAGACAAGTGCTCCCCCTGTTTCCCCCGACCAACCACTATCTCCTT CCTCCACCCCCATCTCCCTCCTCCCCTCCCTCCTCTCCGCCCTGGACTCC GACGGTCGCTCCCCGCTGCACTACGCGTGTTTGGGGGGAAACCCGCTCTG TGTCTCCATCCTTCTTGACCGAGGGGCAGGGCGGGAGGGCGAGAGGGACA GGTGGGGCTTGACGCCCTTGGAGCTGGCAATTAGAGAGAGGGTGCCCGAA ATAGTGGAGATTGAATCGTTGTTGCGGAGGGTGGTGGTGTTCAGAGGGAG TGAGGAAGGGAGGGAGGGAGTGGTGCCGGGAAAGGGGGTTAGGAGGGCAC GGCATGGCATGGGGGACTGGCGCAACAACAGCAGCAGCAGCAGTAGCAGC AGCAGCCAGAGTAGCATCACAAGCACCTCCGCTTCTTCCTCCTTCCCTTC CTCCGCTTCTTCCTCCTTTCCTCCTTCCTCCATTGCGCTACGAATTCCCA TTAACGGCAGGAGGGATAAGCCTCCTTCTGGTGCTGGGCAGGAGGGTGAC AGGGAGGACGGGAGGGAGGGCGGGAGGGACGACGTATTGATCGAGACAGC GGTGTGGTGCGATGCGAGGGAAAGTCAAAAGGAGAGGGAAGCGACGAGCA GGAGGATGGAGGAGGAGAGGAGATTGGCTGAGGCCCTTATGTCTAGGCGG GACGAGCACCATATGATGAAGAAGGAATCATTTATGTCAGGCTGGGGTCT GGGGGAGGGAGGGGGGGGGGGAGATGGGCCGCATGTGAGGACGAAGGGGA GGGAGAGGAAGACGGAAAATGCGGGGTTGTTTGCGCAGATGAGTGCGGAG GAGGAGGTGGAGGAGGGAGGGGTAGAGGGAAGGATGCTCCTGTCGAGAGT AGAAAGGGAGGAGCTGAAGGAGGGAGGGGAGGAGGGAGAACGAGGCCGCC TGATGACGGTGACGGTGGGTGCCCCAGGAGTAGACAATGGAGGGAGAGGA GGGGAGGGAGGGGGAGAGGGAGGAGAGGAGAGCTTGTTGCAGGTTTGGAC GAGGCGGGGGGCGGCAGCGGCGGCGGCGGCGGTGTTGGTGACATGTGCAC TGACCTTACCGGTGTGGTTGTAG back to top
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