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Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| chr7 | genome | chr7:58578..61581 - |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
BLAST of NO07G00160.1 vs.
Match: EWM22256.1 (hypothetical protein Naga_100195g15 [Nannochloropsis gaditana]) HSP 1 Score: 408.3 bits (1048), Expect = 4.200e-110 Identity = 198/360 (55.00%), Postives = 258/360 (71.67%), Query Frame = 0
Query: 250 PLVCPYYDDIPSPFPASFWYVKNPKTASSTLGGVFRSVAAHHGVEMLNSDEIHMDLPQLKRTIAEVLAAFGSAVAPDPPLGLANHMPFDISARDIFRKTAPVMLFTSVREPVAQFHSHFVEVCKQGKKRRESSKCFGPAVQERTAMANAMEPDAQFAYIRGDASDAESAAAQYDFVFLRERLEESLVAFMIMYGLDFADIAHVAAKVRTELYPGPRELPEELNELIRTKTTEDAKLWAKANVMLDEKITAINGHCGGKAYFSSMLTVFRKLQKVVMQECTDFRGWYKKHGFSTVLRYWGDNGQAPRCRDFVVRREMRAWQKHHVTEMLRAAMAKSRGGNTA-PILESKGPA-VNGWGLPK 608
PL C YDD PS FP++FWYVK+ KTASSTL GVFRSVAAH GV MLN++E+ MD+ QLK +V++A S P LGLANHMP + + + + P++LFTSVREPV FHS F+ C+ + ++ C+G V ++ AMA MEP+ Q YIRGDA D ESAAAQY +F+RERLEESLV FMI+YGLDFADI H+++KVRT++YP ++P ELNEL+ K+ EDA+L+A+AN +LD+KI IN +C G+AYF+SML VF +LQ V+ EC + WY++HGFSTVL YW DNG APRCRDFVVRREMRAWQ+ +R A+A++ +A E G + ++GWG+PK
Sbjct: 136 PLACTAYDDRPSQFPSNFWYVKSHKTASSTLAGVFRSVAAHRGVTMLNAEEVRMDVEQLKSAKQKVISAMNSVFGEVPRLGLANHMPLNTESYALLKSDGPLLLFTSVREPVGYFHSIFLHKCRNSEMKKNVD-CYGAVVDKKVAMATTMEPNPQLNYIRGDAVDVESAAAQYGLIFVRERLEESLVVFMILYGLDFADIVHLSSKVRTDMYPDSEKMPVELNELVERKSQEDARLYARANALLDDKIATINKNCKGEAYFASMLAVFSRLQATVVAECEKYNRWYEEHGFSTVLTYWNDNGVAPRCRDFVVRREMRAWQEEDKAIAIRVAVAEALAAESARSSSEGSGASELDGWGMPK 494
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO07G00160.1 ID=NO07G00160.1|Name=NO07G00160.1|organism=Nannochloropsis oceanica|type=mRNA|length=2236bp
CGTCCTCATCGCCGTTCCCGATATGGGCTCATACACCACTTCCCCACCCA
TGCCACGAACAGACAGGCCTAAATCAATTTGTTTTCACTCCCACGTCCAA
GCCAAGTGTCTATATCTGCCTCCCACTACTGTCCACAGCAGGATGGCTCG
AGATGAGGATGACAAGCGACCCCGTGGCGCTCGAGCCATCATCTCTTGGT
GCATGGCCTCTTCTTGGAGACGGGCTTTATTGGGTTGTACACTGGGGATA
TTTGCAATGGTCTGGTTTGTGACCCACCTGGCAAGCAACATGGACGGGGG
CAGTAGCGGAAGCAGCATGCTGAGTACGTCCACAATCACCAACAGCAGAG
ACAAGAATGCCAACTTTACCCCTTTCACGGCTTCATCTTTACCCCCTCAC
ATCGAGGGCAATACCATCATGGCGGAGATGCCCTCAGTCGCTGCTATCCC
TCTAAAGAGCGTGAAGAGCGAAGATGACGTCTCTACCCTCGAGCACGCCT
CCCCTTTGCTCCGCACCACGAAAGAGGGGGGAGACACCCCCCAGCTACCA
TTTGTATCTGCGAAAAAAAATAATAATGAAGGTGAAAGTCTCGGGAACAA
CGCCGTCATCACGACCATCACATCCATCGACAGCGGCGGCATCAGCAAGG
GCAACGAGGACAACGGTGACACGGACTCCACTCTTGCGGACATTGAGAAG
AAAGACAATGCGACCTCTGAGACCGTAACCACTACTGCTAGCATGGCTGA
GGCTGCTACAACAGCTTTCCCCCTCGTCTGTCCCTATTACGACGACATAC
CTAGCCCGTTTCCCGCCTCTTTTTGGTACGTCAAGAACCCCAAGACAGCC
AGCAGCACACTTGGCGGCGTCTTCCGCAGTGTAGCAGCCCACCACGGCGT
GGAAATGCTCAACTCGGACGAAATACACATGGACTTACCCCAGCTTAAGC
GTACCATCGCCGAGGTGCTGGCGGCCTTCGGCAGTGCCGTGGCTCCCGAT
CCGCCTCTCGGGCTGGCCAACCACATGCCATTCGATATTAGTGCCCGCGA
CATTTTCAGAAAGACTGCGCCTGTGATGCTGTTTACCTCGGTTCGTGAGC
CTGTTGCTCAATTTCATTCGCACTTCGTGGAGGTTTGCAAACAAGGGAAG
AAGAGAAGAGAAAGTAGTAAATGTTTTGGCCCGGCGGTACAGGAGCGGAC
GGCGATGGCGAATGCCATGGAACCCGACGCTCAGTTTGCCTATATTCGCG
GGGACGCATCTGATGCCGAGTCTGCTGCGGCACAGTATGATTTTGTGTTT
CTGCGGGAGCGCCTGGAGGAATCGTTGGTGGCCTTTATGATCATGTACGG
CCTGGACTTTGCCGACATTGCACATGTTGCCGCCAAGGTGCGCACGGAAT
TATACCCTGGGCCGAGAGAGCTGCCCGAAGAATTGAATGAACTGATTCGC
ACCAAGACAACCGAGGACGCTAAGCTTTGGGCCAAGGCAAACGTGATGCT
GGATGAGAAAATTACTGCCATAAATGGCCACTGTGGTGGTAAGGCGTACT
TTTCGTCAATGCTAACAGTTTTTCGGAAATTGCAAAAAGTGGTGATGCAG
GAATGCACAGATTTTCGTGGTTGGTACAAGAAGCATGGTTTTTCGACCGT
GCTCCGGTATTGGGGCGACAATGGCCAGGCACCCCGATGTCGAGACTTTG
TGGTACGCCGTGAGATGCGTGCTTGGCAAAAGCATCATGTGACGGAAATG
CTCAGGGCCGCGATGGCTAAATCAAGAGGAGGAAATACAGCGCCGATCTT
GGAATCAAAAGGACCAGCAGTAAATGGCTGGGGTCTACCAAAAGATGCAT
GATTGCCTTGACGATTTCGATGAAATTAGAAAAAGGAAGGCAGTACGCAG
GACAGTATGATAGCGTTTGTATATATTTATTTTAAATGTGGCGCGATTGG
TACTCTTTCTCCATTTGATTGGAAAGTGAAGTGTACAGATTTAAACTTTA
ATAGAACCTCCAGATTCTTCAATTTTTTCCGAGGAGGATTCACGGGGTCA
TCAAAACGGCTTCTCCAAGGCAGATAACCGTGCGTTGGCCGGTCGTGGGG
GCTTCAAGCGAATAAAAGACTATGGTCTGGCATGTATATGACCATAGCCT
ACCAGGTGACCCATGCTGATAACTATAAAGCATTACCGCCAAGATTATAA
ATTTGTTGTCATAACATAAGCATCAAAGTAAGCCCG back to topprotein sequence of NO07G00160.1 >NO07G00160.1-protein ID=NO07G00160.1-protein|Name=NO07G00160.1|organism=Nannochloropsis oceanica|type=polypeptide|length=610bp
MGSYTTSPPMPRTDRPKSICFHSHVQAKCLYLPPTTVHSRMARDEDDKRP
RGARAIISWCMASSWRRALLGCTLGIFAMVWFVTHLASNMDGGSSGSSML
STSTITNSRDKNANFTPFTASSLPPHIEGNTIMAEMPSVAAIPLKSVKSE
DDVSTLEHASPLLRTTKEGGDTPQLPFVSAKKNNNEGESLGNNAVITTIT
SIDSGGISKGNEDNGDTDSTLADIEKKDNATSETVTTTASMAEAATTAFP
LVCPYYDDIPSPFPASFWYVKNPKTASSTLGGVFRSVAAHHGVEMLNSDE
IHMDLPQLKRTIAEVLAAFGSAVAPDPPLGLANHMPFDISARDIFRKTAP
VMLFTSVREPVAQFHSHFVEVCKQGKKRRESSKCFGPAVQERTAMANAME
PDAQFAYIRGDASDAESAAAQYDFVFLRERLEESLVAFMIMYGLDFADIA
HVAAKVRTELYPGPRELPEELNELIRTKTTEDAKLWAKANVMLDEKITAI
NGHCGGKAYFSSMLTVFRKLQKVVMQECTDFRGWYKKHGFSTVLRYWGDN
GQAPRCRDFVVRREMRAWQKHHVTEMLRAAMAKSRGGNTAPILESKGPAV
NGWGLPKDA* back to topmRNA from alignment at chr7:58578..61581- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO07G00160.1 ID=NO07G00160.1|Name=NO07G00160.1|organism=Nannochloropsis oceanica|type=mRNA|length=3004bp|location=Sequence derived from alignment at chr7:58578..61581- (Nannochloropsis oceanica)
CGTCCTCATCGCCGTTCCCGATATGGGCTCATACACCACTTCCCCACCCA
TGCCACGAACAGACAGGCCTAAATCAATTTGTTTTCACTCCCACGTCCAA
GCCAAGTGTCTATATCTGCCTCCCACTACTGTCCACAGGTACGCGACTTC
TCGTACCGTACCCTGCACACCACAATCTCCTCCTCCCATCATCGCTGGCA
GGGTCGCGTGGCGTGAGCATGTCTGAGCCCCATGCGTGTTAGTCAATCTT
AGCAGTATCTCTGCCTTATTAAACATACCTTCAAAAGTGTGCCCTTCCCG
TCGATTGATGCCCACTATCCACCTTTCAACATCGCATGCCCATATACATC
ATCGGGCCATCCCTCCCTCCAGTCCTTTAGGCCGACCTTAAAGTATGAGG
GCAAGGCACCGCATAGAGCTTCATCCGCCATTTTTTCATTGCTCCAAAAT
TCATTCTCGTTTGTTCCTGCTGGCCAAATACGCAGGCAGGATACCGTCTG
CCATTTCATACATCCGTCTCTCCGTGAATACTCCACCGCTCCTTCTTTCC
CTCCCTCCCTTTTCATCTGATCGACAAGGCACCAATACCGTTCTCTCTCC
TCTTTATCTCCTATCCTCGAGTTTGTCCACATATTCATCCAAATTTGCCC
CCTTCTGGTCTCTGACAAATAGTATTGCGGACGAAGGCTCAAACTCTACG
CCACTAGGCATGATGACGTTTTCAGCCACAGCATGTAGTCATGCTCATGC
CCGATTCTCATCCCAACGCCGTCAATTTGCTCTGAATATTTTCTCCTACG
AAGGTCAACAAAAACAACATCCCCTCTTCCTTATTTTCATGATCACCCAT
CGAACGATGCTCATTAAAATTTTGTCGCCCTCTCCTCCTCTCCCCTTCCT
TTCCAGCAGGATGGCTCGAGATGAGGATGACAAGCGACCCCGTGGCGCTC
GAGCCATCATCTCTTGGTGCATGGCCTCTTCTTGGAGACGGGCTTTATTG
GGTTGTACACTGGGGATATTTGCAATGGTCTGGTTTGTGACCCACCTGGC
AAGCAACATGGACGGGGGCAGTAGCGGAAGCAGCATGCTGAGTACGTCCA
CAATCACCAACAGCAGAGACAAGAATGCCAACTTTACCCCTTTCACGGCT
TCATCTTTACCCCCTCACATCGAGGGCAATACCATCATGGCGGAGATGCC
CTCAGTCGCTGCTATCCCTCTAAAGAGCGTGAAGAGCGAAGATGACGTCT
CTACCCTCGAGCACGCCTCCCCTTTGCTCCGCACCACGAAAGAGGGGGGA
GACACCCCCCAGCTACCATTTGTATCTGCGAAAAAAAATAATAATGAAGG
TGAAAGTCTCGGGAACAACGCCGTCATCACGACCATCACATCCATCGACA
GCGGCGGCATCAGCAAGGGCAACGAGGACAACGGTGACACGGACTCCACT
CTTGCGGACATTGAGAAGAAAGACAATGCGACCTCTGAGACCGTAACCAC
TACTGCTAGCATGGCTGAGGCTGCTACAACAGCTTTCCCCCTCGTCTGTC
CCTATTACGACGACATACCTAGCCCGTTTCCCGCCTCTTTTTGGTACGTC
AAGAACCCCAAGACAGCCAGCAGCACACTTGGCGGCGTCTTCCGCAGTGT
AGCAGCCCACCACGGCGTGGAAATGCTCAACTCGGACGAAATACACATGG
ACTTACCCCAGCTTAAGCGTACCATCGCCGAGGTGCTGGCGGCCTTCGGC
AGTGCCGTGGCTCCCGATCCGCCTCTCGGGCTGGCCAACCACATGCCATT
CGATATTAGTGCCCGCGACATTTTCAGAAAGACTGCGCCTGTGATGCTGT
TTACCTCGGTTCGTGAGCCTGTTGCTCAATTTCATTCGCACTTCGTGGAG
GTTTGCAAACAAGGGAAGAAGAGAAGAGAAAGTAGTAAATGTTTTGGCCC
GGCGGTACAGGAGCGGACGGCGATGGCGAATGCCATGGAACCCGACGCTC
AGTTTGCCTATATTCGCGGGGACGCATCTGATGCCGAGTCTGCTGCGGCA
CAGTATGATTTTGTGTTTCTGCGGGAGCGCCTGGAGGAATCGTTGGTGGC
CTTTATGATCATGTACGGCCTGGACTTTGCCGACATTGCACATGTTGCCG
CCAAGGTGCGCACGGAATTATACCCTGGGCCGAGAGAGCTGCCCGAAGAA
TTGAATGAACTGATTCGCACCAAGACAACCGAGGACGCTAAGCTTTGGGC
CAAGGCAAACGTGATGCTGGATGAGAAAATTACTGCCATAAATGGCCACT
GTGGTGGTAAGGCGTACTTTTCGTCAATGCTAACAGTTTTTCGGAAATTG
CAAAAAGTGGTGATGCAGGAATGCACAGATTTTCGTGGTTGGTACAAGAA
GCATGGTTTTTCGACCGTGCTCCGGTATTGGGGCGACAATGGCCAGGCAC
CCCGATGTCGAGACTTTGTGGTACGCCGTGAGATGCGTGCTTGGCAAAAG
CATCATGTGACGGAAATGCTCAGGGCCGCGATGGCTAAATCAAGAGGAGG
AAATACAGCGCCGATCTTGGAATCAAAAGGACCAGCAGTAAATGGCTGGG
GTCTACCAAAAGATGCATGATTGCCTTGACGATTTCGATGAAATTAGAAA
AAGGAAGGCAGTACGCAGGACAGTATGATAGCGTTTGTATATATTTATTT
TAAATGTGGCGCGATTGGTACTCTTTCTCCATTTGATTGGAAAGTGAAGT
GTACAGATTTAAACTTTAATAGAACCTCCAGATTCTTCAATTTTTTCCGA
GGAGGATTCACGGGGTCATCAAAACGGCTTCTCCAAGGCAGATAACCGTG
CGTTGGCCGGTCGTGGGGGCTTCAAGCGAATAAAAGACTATGGTCTGGCA
TGTATATGACCATAGCCTACCAGGTGACCCATGCTGATAACTATAAAGCA
TTACCGCCAAGATTATAAATTTGTTGTCATAACATAAGCATCAAAGTAAG
CCCG back to topCoding sequence (CDS) from alignment at chr7:58578..61581- >NO07G00160.1 ID=NO07G00160.1|Name=NO07G00160.1|organism=Nannochloropsis oceanica|type=CDS|length=1830bp|location=Sequence derived from alignment at chr7:58578..61581- (Nannochloropsis oceanica)
ATGGGCTCATACACCACTTCCCCACCCATGCCACGAACAGACAGGCCTAA
ATCAATTTGTTTTCACTCCCACGTCCAAGCCAAGTGTCTATATCTGCCTC
CCACTACTGTCCACAGCAGGATGGCTCGAGATGAGGATGACAAGCGACCC
CGTGGCGCTCGAGCCATCATCTCTTGGTGCATGGCCTCTTCTTGGAGACG
GGCTTTATTGGGTTGTACACTGGGGATATTTGCAATGGTCTGGTTTGTGA
CCCACCTGGCAAGCAACATGGACGGGGGCAGTAGCGGAAGCAGCATGCTG
AGTACGTCCACAATCACCAACAGCAGAGACAAGAATGCCAACTTTACCCC
TTTCACGGCTTCATCTTTACCCCCTCACATCGAGGGCAATACCATCATGG
CGGAGATGCCCTCAGTCGCTGCTATCCCTCTAAAGAGCGTGAAGAGCGAA
GATGACGTCTCTACCCTCGAGCACGCCTCCCCTTTGCTCCGCACCACGAA
AGAGGGGGGAGACACCCCCCAGCTACCATTTGTATCTGCGAAAAAAAATA
ATAATGAAGGTGAAAGTCTCGGGAACAACGCCGTCATCACGACCATCACA
TCCATCGACAGCGGCGGCATCAGCAAGGGCAACGAGGACAACGGTGACAC
GGACTCCACTCTTGCGGACATTGAGAAGAAAGACAATGCGACCTCTGAGA
CCGTAACCACTACTGCTAGCATGGCTGAGGCTGCTACAACAGCTTTCCCC
CTCGTCTGTCCCTATTACGACGACATACCTAGCCCGTTTCCCGCCTCTTT
TTGGTACGTCAAGAACCCCAAGACAGCCAGCAGCACACTTGGCGGCGTCT
TCCGCAGTGTAGCAGCCCACCACGGCGTGGAAATGCTCAACTCGGACGAA
ATACACATGGACTTACCCCAGCTTAAGCGTACCATCGCCGAGGTGCTGGC
GGCCTTCGGCAGTGCCGTGGCTCCCGATCCGCCTCTCGGGCTGGCCAACC
ACATGCCATTCGATATTAGTGCCCGCGACATTTTCAGAAAGACTGCGCCT
GTGATGCTGTTTACCTCGGTTCGTGAGCCTGTTGCTCAATTTCATTCGCA
CTTCGTGGAGGTTTGCAAACAAGGGAAGAAGAGAAGAGAAAGTAGTAAAT
GTTTTGGCCCGGCGGTACAGGAGCGGACGGCGATGGCGAATGCCATGGAA
CCCGACGCTCAGTTTGCCTATATTCGCGGGGACGCATCTGATGCCGAGTC
TGCTGCGGCACAGTATGATTTTGTGTTTCTGCGGGAGCGCCTGGAGGAAT
CGTTGGTGGCCTTTATGATCATGTACGGCCTGGACTTTGCCGACATTGCA
CATGTTGCCGCCAAGGTGCGCACGGAATTATACCCTGGGCCGAGAGAGCT
GCCCGAAGAATTGAATGAACTGATTCGCACCAAGACAACCGAGGACGCTA
AGCTTTGGGCCAAGGCAAACGTGATGCTGGATGAGAAAATTACTGCCATA
AATGGCCACTGTGGTGGTAAGGCGTACTTTTCGTCAATGCTAACAGTTTT
TCGGAAATTGCAAAAAGTGGTGATGCAGGAATGCACAGATTTTCGTGGTT
GGTACAAGAAGCATGGTTTTTCGACCGTGCTCCGGTATTGGGGCGACAAT
GGCCAGGCACCCCGATGTCGAGACTTTGTGGTACGCCGTGAGATGCGTGC
TTGGCAAAAGCATCATGTGACGGAAATGCTCAGGGCCGCGATGGCTAAAT
CAAGAGGAGGAAATACAGCGCCGATCTTGGAATCAAAAGGACCAGCAGTA
AATGGCTGGGGTCTACCAAAAGATGCATGA back to top
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