NO06G04540.1, NO06G04540.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO06G04540.1
Unique NameNO06G04540.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3122
Alignment locationchr6:1283360..1291024 -

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Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr6genomechr6:1283360..1291024 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
BLAST of NO06G04540.1 vs.
Match: CBN79519.1 (Vesicle coat complex COPII, subunit SEC23 [Ectocarpus siliculosus])

HSP 1 Score: 1073.5 bits (2775), Expect = 2.300e-310
Identity = 525/780 (67.31%), Postives = 605/780 (77.56%), Query Frame = 0
Query:   52 LALEEKDGLRMSWGVWPSSRIEVTRIVVPVAGLYTPLKRIETMPAPLEYDPIRCNGCGGVLNPHCSVDFRTKVWTCPFCMTRNHFPPHYAENISEQNLPVELFSQYTTVEYELQVPPAGPPVFLLVVDTCLEDAELEHLKDSLQQVLQLLPETALVGLITFGTHVMVHELDSPDCARSYVFRGSKEYTPQRVQDLLNIAPPLHAQAPGM------MMQPGMAADSMGG-RTPALGRFLCPVGDCSFNLEKILEDLQRDSWPVPSDQRPQRCTGVALSVATGLLESSFPRQGARVMLFVGGPPTVGPGMIVGRPKTEDIRSHTDLAKGTAPHYKGAVKHYASLAERAVSASHVIDIFACSLDQVGMMEMKVCVEKTGGLMVLADTFSQSVFKESLLRVLKKLPAEVPKDGGH---LQMGFAASLEVLTSREFKVAGAIGPCSSLRKMAPNVAETAIGEGGTNAWSMGGIDPAVTVAVYFEVTNAANNPLPPSKRRFIQFITQYQHASGRFRLRATTYSGAWHNDAADMGPVSRSFDQEAACVLMTRIAVQRTESDEEGTVHDVLRWVDRSLIKLSSKFGSYRKDDPASFAFPQEFVLYPQFMFHLRRSQFLQLFNSSPDESSYYRTILIRENVANSLVMIQPSLLSYSFSAPPQPVMLDATSIRPDCILLLDTFFHVVVFHGETVAAWRAAGYQNTEEHINFKNLLDSPQLDAQMTMTSRFPVPRFIVCDQHKSQARFLMAKLNPSITHHTGEVGMGQAMLTDDVSLRVFMEHLMKLAVQT 822
            L  EE+D +R SW VWPSSR+E TRIVVPV  LYTP+K     P PL YDPIRCNGCG +LNP+  VDF +K+WTCPFCM RNHFPPHYAENISE NLP EL  Q+TTVEYEL  PP GPP F+  +DTC+ + EL+ LKDSLQQ L LLPE ALVGLITFGT+VMVHEL   DC +SYVFRG+KEYT  +VQ LL I P       G         Q G+   + GG R PA+GRFL PV D SF  E +L+DLQRD+WPVPSDQR  RCTGVAL VA GLLES+ PRQG+RVMLFVGGPPTVGPGM+VGR K E IRSHTDL K  APH+K A K Y  L E+A+   HV+DIFACSLDQ+G++EM+VCVEKTGG MVL D+F QSVFKESL R+ +K   E  + GG    LQMGF  SLEVLTSREFKVAGA+GPCSSL K  PNVAET IG+GGT AWS+GGI PA TVAVYFEVTN  + PLP  KRRF+QF+TQYQ A GRFRLRATT  G WH+D  D+GP+ R +DQ+AA VLM RIAV RTE++E   V D++RW+DRSLI+L +KF  Y KD P SF    EF +YPQ+MFHLRRSQFLQLFNSSPDE+SYYR IL RENVA+SLVM+QPSLLSYSF  PP P MLDA S+RPD ILLLDTFFHVV+FHGET+ AWR  GYQ+ EEH  F+ LL++PQ DAQ+ M SR PVPR+IVCDQHKS+ARFL++KLNPS+TH+T +   GQA+ TDDVSLRVFMEHLMKL+ Q+
Sbjct:    7 LGAEERDAVRFSWNVWPSSRLEATRIVVPVGCLYTPMKSRHDAPPPLAYDPIRCNGCGAILNPYAQVDFMSKLWTCPFCMQRNHFPPHYAENISESNLPYELIPQFTTVEYELTTPPHGPPAFVFCIDTCVSEDELDELKDSLQQTLSLLPEEALVGLITFGTNVMVHELGFADCPKSYVFRGAKEYTAVKVQQLLGILPAGRGAGAGATYGHQPQQQAGVPGGAAGGARDPAVGRFLMPVADASFQFETVLDDLQRDAWPVPSDQRVARCTGVALQVALGLLESACPRQGSRVMLFVGGPPTVGPGMMVGRSKDETIRSHTDLQKNNAPHFKVACKFYEGLTEKAMQNCHVVDIFACSLDQIGLLEMRVCVEKTGGQMVLGDSFGQSVFKESLARLFRKPTGEDGQQGGGAALLQMGFGPSLEVLTSREFKVAGAMGPCSSLGKKNPNVAETEIGQGGTYAWSLGGITPATTVAVYFEVTNNQSEPLPQHKRRFLQFVTQYQQAGGRFRLRATTVCGGWHSDPNDLGPLVRGYDQQAAAVLMARIAVHRTETEE---VADIMRWLDRSLIRLCAKFAQYTKDKPESFRLASEFSMYPQYMFHLRRSQFLQLFNSSPDEASYYRGILCRENVASSLVMLQPSLLSYSFQGPPVPAMLDAASVRPDTILLLDTFFHVVIFHGETIGAWREQGYQDHEEHAAFRQLLEAPQADAQIIMQSRCPVPRYIVCDQHKSEARFLISKLNPSVTHNTTDGSQGQAIFTDDVSLRVFMEHLMKLSTQS 783          
The following BLAST results are available for this feature:
BLAST of NO06G04540.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1
Match NameE-valueIdentityDescription
CBN79519.12.300e-31067.31Vesicle coat complex COPII, subunit SEC23 [Ectocar... [more]
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO06G04540NO06G04540Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO06G04540.1NO06G04540.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO06G04540.1.cds1NO06G04540.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO06G04540.1.cds2NO06G04540.1.cds2Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO06G04540.1.cds3NO06G04540.1.cds3Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO06G04540.1.cds4NO06G04540.1.cds4Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO06G04540.1.cds5NO06G04540.1.cds5Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO06G04540.1.cds6NO06G04540.1.cds6Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO06G04540.1.cds7NO06G04540.1.cds7Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO06G04540.1.cds8NO06G04540.1.cds8Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO06G04540.1.cds9NO06G04540.1.cds9Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO06G04540.1.cds10NO06G04540.1.cds10Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO06G04540.1.cds11NO06G04540.1.cds11Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO06G04540.1.cds12NO06G04540.1.cds12Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO06G04540.1.cds13NO06G04540.1.cds13Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO06G04540.1.cds14NO06G04540.1.cds14Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO06G04540.1.cds15NO06G04540.1.cds15Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO06G04540.1.cds16NO06G04540.1.cds16Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO06G04540.1.cds17NO06G04540.1.cds17Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO06G04540.1.cds18NO06G04540.1.cds18Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO06G04540.1.cds19NO06G04540.1.cds19Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO06G04540.1.cds20NO06G04540.1.cds20Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO06G04540.1.cds21NO06G04540.1.cds21Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO06G04540.1.cds22NO06G04540.1.cds22Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO06G04540.1.cds23NO06G04540.1.cds23Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO06G04540.1.cds24NO06G04540.1.cds24Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO06G04540.1.cds25NO06G04540.1.cds25Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO06G04540.1.cds26NO06G04540.1.cds26Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO06G04540.1 ID=NO06G04540.1|Name=NO06G04540.1|organism=Nannochloropsis oceanica|type=mRNA|length=3122bp
CGGGCCGCAACATTATCACAAGCCACCAATCCCCCTCCCAACACCACACA
CGGCCTGGACCAACCTATGCCGTACATAGGCAAGCGGTTTCATGAGAGGG
AACTGCTTGATGGCATGCGCGAAAAGCCGGGCTGCCGCTTTTGACGCCTG
CCTTTTCAAACGAGGGAGGAAGAACTACACTGCCCATGCACGACATCGAC
CTTCGCCCATACCCACACCACCCCATTCACCTACCCATCATACTCCACAG
AAGACGGCACCATCGAGACACCATGGATCCATACGGACAGGGTGCACAGG
GAGGCGGCTACTACATGCCTCAAGAGGACATGAGCCCCTTGGCCTTGGAG
GAGAAAGATGGTTTGCGCATGTCCTGGGGCGTATGGCCCTCTTCTCGCAT
AGAGGTCACCCGCATCGTTGTTCCCGTAGCAGGACTATACACCCCCTTGA
AGCGCATCGAGACCATGCCCGCACCTTTGGAGTATGACCCCATTCGATGC
AATGGCTGCGGTGGCGTGCTCAACCCTCACTGCTCTGTGGATTTTCGCAC
CAAGGTCTGGACCTGTCCCTTCTGCATGACACGCAATCACTTCCCCCCGC
ATTATGCCGAGAATATTTCGGAGCAGAATCTTCCCGTGGAGCTGTTCTCC
CAGTATACGACCGTGGAGTACGAGCTGCAGGTCCCTCCTGCGGGCCCGCC
CGTCTTCCTCCTCGTGGTTGACACCTGCCTGGAAGACGCCGAGCTTGAGC
ACCTGAAAGACTCCCTGCAACAGGTCCTGCAGTTGTTGCCCGAGACGGCC
TTGGTGGGTCTCATCACCTTCGGGACGCACGTCATGGTCCACGAGCTTGA
TTCTCCTGACTGTGCCCGCTCGTACGTCTTCCGGGGTAGCAAGGAGTACA
CTCCGCAGCGGGTGCAAGACCTGTTGAACATCGCGCCGCCCCTGCATGCC
CAGGCCCCCGGCATGATGATGCAGCCCGGCATGGCCGCCGACAGCATGGG
AGGCCGCACGCCTGCCCTCGGTCGCTTCTTGTGCCCTGTAGGCGACTGCT
CTTTCAACCTCGAGAAGATCCTTGAGGACCTCCAGCGTGACTCCTGGCCA
GTGCCGTCGGACCAACGGCCCCAGCGCTGCACGGGCGTGGCTCTGTCGGT
GGCGACGGGCCTCCTCGAGTCCTCCTTTCCGCGACAGGGGGCGCGTGTGA
TGCTGTTTGTGGGGGGTCCGCCGACGGTGGGGCCGGGGATGATCGTCGGA
CGGCCCAAGACAGAAGATATCCGCTCCCACACGGACCTGGCTAAGGGCAC
CGCCCCCCATTACAAGGGCGCGGTGAAACATTACGCATCCCTCGCCGAAC
GAGCTGTCTCGGCCTCGCACGTCATCGATATTTTCGCCTGCTCCTTAGAC
CAGGTGGGCATGATGGAGATGAAGGTCTGCGTGGAAAAGACGGGCGGGCT
CATGGTCCTCGCGGACACTTTCTCGCAGTCCGTGTTCAAGGAATCCCTCC
TCCGCGTGTTGAAGAAGCTGCCCGCCGAGGTCCCTAAGGACGGGGGCCAC
CTGCAAATGGGATTTGCGGCTTCCCTCGAGGTGCTGACCTCCCGAGAATT
TAAGGTAGCGGGTGCCATCGGCCCATGCTCGTCCTTGAGGAAAATGGCGC
CCAACGTGGCCGAGACTGCCATCGGGGAGGGGGGCACCAACGCCTGGAGC
ATGGGCGGCATCGACCCGGCCGTGACGGTGGCCGTGTACTTCGAGGTGAC
CAATGCAGCCAACAACCCCCTCCCTCCCTCCAAGCGCCGCTTCATCCAGT
TCATCACTCAGTACCAGCACGCCTCGGGCCGCTTCCGGCTGCGGGCCACC
ACCTACTCAGGAGCCTGGCACAACGATGCGGCGGACATGGGCCCCGTCTC
CCGGTCTTTTGACCAGGAGGCGGCGTGCGTTTTGATGACGCGAATTGCCG
TGCAGCGGACAGAGTCGGACGAAGAAGGCACAGTCCATGACGTGCTCCGC
TGGGTAGATCGCTCGCTGATCAAGCTCTCATCAAAGTTCGGGAGCTACCG
GAAGGACGATCCGGCTTCTTTCGCCTTTCCCCAGGAGTTTGTCCTCTACC
CCCAATTCATGTTCCACTTGCGGCGTTCTCAATTTTTGCAACTCTTCAAT
TCCTCGCCCGATGAGTCCAGCTACTACCGTACCATCCTGATCCGCGAGAA
CGTGGCCAATTCCCTAGTCATGATCCAGCCCTCTCTTTTGTCCTACAGCT
TCTCAGCCCCCCCCCAACCGGTGATGCTCGACGCGACCAGCATCCGGCCT
GATTGCATCCTTCTCCTCGACACGTTCTTCCACGTCGTCGTCTTCCACGG
AGAGACAGTGGCGGCCTGGCGGGCGGCAGGATACCAAAACACGGAGGAGC
ACATCAATTTCAAGAACCTGCTGGATTCGCCTCAGCTCGACGCTCAGATG
ACAATGACCAGCCGCTTTCCCGTCCCAAGGTTCATCGTTTGCGACCAGCA
CAAATCGCAGGCCCGCTTCCTGATGGCCAAGCTTAACCCTTCCATCACGC
ACCACACGGGCGAGGTGGGCATGGGCCAGGCCATGTTGACGGACGACGTG
TCCCTCCGTGTTTTCATGGAGCACCTCATGAAGCTGGCCGTACAGACACC
TTAGGCGTAGGTCGAAGGCAGGGGAGGAGAGAGGAATGGCGGGGAGGTGT
GTGAGCCCGTGCCCTGCTGTCTTGTCGTAGCCGTGCTGTTGAGGGTGGTG
TCTGATGTCGTCTCGGGATCAAGCGAATGGAAGAAGGCAGAAAAGGAGAG
GGGAAAATGGCGTAGAGGGGTGGAGTGCCCATCACACGGGCATGATCGGC
TAGACAAAGGAAGAAGGGAGAGAGAGTGAGGACGAGTGCGGGTTCTACCT
CTCATGTATTTCCACTACTACGCTCGCCAATGTGTTCATGAGAAAGGGGA
AGTGGAGAAGTCAAAGCGCAACCACGGTTCCTGACAAGCATGTCAGTGAT
TGAGCAAGCAAGCAACCAGGCCCAAAGCAAAGCAAAAGCATAAAAAGAAA
GCATCAAAAGAAAGCATCATAAGATATCATAGGCCCCAAGGGAGCGGAGA
GGGAACAATAGTTGCTGCATAA
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protein sequence of NO06G04540.1

>NO06G04540.1-protein ID=NO06G04540.1-protein|Name=NO06G04540.1|organism=Nannochloropsis oceanica|type=polypeptide|length=823bp
MHDIDLRPYPHHPIHLPIILHRRRHHRDTMDPYGQGAQGGGYYMPQEDMS
PLALEEKDGLRMSWGVWPSSRIEVTRIVVPVAGLYTPLKRIETMPAPLEY
DPIRCNGCGGVLNPHCSVDFRTKVWTCPFCMTRNHFPPHYAENISEQNLP
VELFSQYTTVEYELQVPPAGPPVFLLVVDTCLEDAELEHLKDSLQQVLQL
LPETALVGLITFGTHVMVHELDSPDCARSYVFRGSKEYTPQRVQDLLNIA
PPLHAQAPGMMMQPGMAADSMGGRTPALGRFLCPVGDCSFNLEKILEDLQ
RDSWPVPSDQRPQRCTGVALSVATGLLESSFPRQGARVMLFVGGPPTVGP
GMIVGRPKTEDIRSHTDLAKGTAPHYKGAVKHYASLAERAVSASHVIDIF
ACSLDQVGMMEMKVCVEKTGGLMVLADTFSQSVFKESLLRVLKKLPAEVP
KDGGHLQMGFAASLEVLTSREFKVAGAIGPCSSLRKMAPNVAETAIGEGG
TNAWSMGGIDPAVTVAVYFEVTNAANNPLPPSKRRFIQFITQYQHASGRF
RLRATTYSGAWHNDAADMGPVSRSFDQEAACVLMTRIAVQRTESDEEGTV
HDVLRWVDRSLIKLSSKFGSYRKDDPASFAFPQEFVLYPQFMFHLRRSQF
LQLFNSSPDESSYYRTILIRENVANSLVMIQPSLLSYSFSAPPQPVMLDA
TSIRPDCILLLDTFFHVVVFHGETVAAWRAAGYQNTEEHINFKNLLDSPQ
LDAQMTMTSRFPVPRFIVCDQHKSQARFLMAKLNPSITHHTGEVGMGQAM
LTDDVSLRVFMEHLMKLAVQTP*
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mRNA from alignment at chr6:1283360..1291024-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO06G04540.1 ID=NO06G04540.1|Name=NO06G04540.1|organism=Nannochloropsis oceanica|type=mRNA|length=7665bp|location=Sequence derived from alignment at chr6:1283360..1291024- (Nannochloropsis oceanica)
CGGGCCGCAACATTATCACAAGCCACCAATCCCCCTCCCAACACCACACA CGGCCTGGACCAACCTATGCCGTACATAGGCAAGCGGTTTCATGAGAGGG AACTGCTTGATGGCATGCGCGAAAAGCCGGGCTGCCGCTTTTGACGCCTG CCTTTTCAAACGAGGGAGGAAGAACTACACTGCCCATGCACGACATCGAC CTTCGCCCATACCCACACCACCCCATTCACCTACCCATCATACTCCACAG AAGACGGCACCATCGAGACACCATGGATCCATACGGACAGGGTGCACAGG GAGGCGGCTACTACATGCCTCAAGAGGACATGAGCCCCTTGGCCTTGGAG GAGAAAGATGGTTTGCGCATGTCCTGGGGCGTATGGCCCTCTTCTCGCAT AGAGGTCACCCGCATCGTTGTTCCCGTAGCAGGACTGTAAGTGTGCAAGA AGGGGTTGGAGGGAGACTTTCGGGGCGATTATTTTATGCGTGCATGCCAC GGATATGCCTGGAACCTTAAAATCATCATCGTACCCTCCGTCCCTCCTTC CCTCCCTCCCTCCCTTTTGTCCCTTTTCTCCCTCCATCCATCCGTCCGTC CGTCCGTACGTCCGTCCCTCCCTCCATCCGTCCTTCCCTCTGTCCCTCGG TCGGTCCGTTTCTCCGTCCGTCCGTCCTTCCTTCTCCCCCAGATACACCC CCTTGAAGCGCATCGAGACCATGCCCGCACCTTTGGAGTATGACCCCATT CGATGCAATGGCTGCGGTGGCGTGCTCAACCCTCACTGGTAGGTTGCGAG GTCAGGAAGGGAAGGAAAGCGAGGACATGGGGGAGACTAGTGGAAGAGGA AGGAAGGGCTACCGGGCTATGCACGGCACTTCATCTTTTGCGTTGCAATT CGCTTGCCCACAGTCTTATCGGAGACAAGAGACCAATAGTCATTTCCTTC TCCACACACACCGCAATAACAGCTCTGTGGATTTTCGCACCAAGGTCTGG ACCTGTCCCTTCTGCATGACACGGTGCGTGCCTCCCAGCACAGGGGGAGA CGGAAGGAGGGAGCGGAGGAGGGCATTTACTCACCACACAGACAAACGCA ATACACACAGCAATCACTTCCCCCCGCATTATGCCGAGAATATTTCGGAG CAGAATCTTCCCGTGGAGCTGTTCTCCCAGTATACGACCGTGGAGTACGA GCTGCAGGTCCCTCCTGCGGGTAGGGAGGGAGGGAAAGAGAGAGGGAGGG AGAACGATTTGAACGATGCGACGTGCGGAATATTCTTAGTATGTCTCTCA TTACGTTCTCAACCCATTCAATGCCATAGGCCCGCCCGTCTTCCTCCTCG TGGTTGACACCTGCCTGGAAGACGCCGAGCTTGAGCACCTGAAAGACTCC CTGCAACAGGTTCGCCTTTTCCCTCCCTCCCTCCTCCCTCCTTTCATGCC GTTTCCTTCCCTCCTTTCTCCCTCCCTTTCTTCTATCCTACCTGCCTCCA ACTCTCAACTTCCTTCTCCCTTTCTCCTTTCCTCCCTCTCACAGGTCCTG CAGTTGTTGCCCGAGACGGCCTTGGTGGGTCTCATCACCTTCGGGACGCA CGTCATGGTCCACGAGCTTGATTCTCCTGGTGCGTCCCTCCCTCCCTTCC TCCCTCCCTTCCTCGCACTTCTTTCCCTCTCATTCACGAGTGATTTAAAA CTCTCATTCTCCCTTTTCTCCTTCTTTCTTTCTCCTCCCTTTCCCTCTCC AACAGACTGTGCCCGCTCGTACGTCTTCCGGGGTAGCAAGGAGTACACTC CGCAGGTGAGGGAGCGAGGGAGGGCGGGAGGGAAGGAGGCATATCAAGAG AGAGGAACGCATGCTATAAACGCCCCAAGCCTGATACTGAACTTCTCCTC TCTCCCTATATCCCTCCCTGCCGCGCTCCCTCCTCGCCGCTTCTTAGCGG GTGCAAGACCTGTTGAACATCGCGCCGCCCCTGCATGCCCAGGCCCCCGG CATGATGATGCAGCCCGGTAGGGAGGGAGGGAGGGAGGGAGGCGAGAAGT ACGGCCTTATGCGCACCATGAGCTGCTTGCACTTCAGACTTATAACCTTT CCACCCCCCTCCCCTCTTTCCCTCCCTCCCTCCCTCCCTCCTCCCTCCCT CGTGCAGGCATGGCCGCCGACAGCATGGGAGGCCGCACGCCTGCCCTCGG TCGCTTCTTGTGCCCTGTAGGCGACTGCTCTTTCAACCTCGAGAAGATCC TTGAGGACCTCCAGCGTGACTCCTGGCCAGTGCCGGTACGTGCGTCCCTC CCTCGCTGGCCCTCACTTCCCCCTTCCTGCAACAGAATATGCAACCCAAA AGTGAGTGACACCTTTCAAGGCAACTACGCTCACCGTCTTCAATCTGGCT CGCCCCCCCCTCCCTTCCCTCCCTCCCTCCTTCCCTCCCTCCCTCCCTCC CTCTTCCCGAGCAGTCGGACCAACGGCCCCAGCGCTGCACGGGCGTGGCT CTGTCGGTGGCGACGGGCCTCCTCGAGTCCTCCTTTCCGCGACAGGTGTG CTATGAAGGAGGGAGGGAAGGAGGGAGTTCAGGGATGGAGGGGGTTCTGA TCGATGGTGCTGCTGTACGAGGTCGTGGACATGTCAAGAGGAAACGAACG GAGAGGACGAATGGAAGAAAGCCAAGACAAGAAAGAAAACGTACCCAGGC GAGAATCTCACACCTGGTCTCCTCCTTCACCCTCCTCTCTCCACCTACTC CTGACAGGGGGCGCGTGTGATGCTGTTTGTGGGGGGTCCGCCGACGGTGG GGCCGGGGATGATCGTCGGACGGCCCAAGACAGAAGATATCCGTAAGTAC CCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCC CTCCCTCCCTTTCTTCCTCCCTCCCTCCCTTTCTTCCTCCCTCCCTCCCT TTCTTCCTCCCTCCCTCCCATTCTTCGTCCCTCCCTCCCTCCCTCCCTCC CTCCCTTTCTTCGTCCCTCCCTCCCTCCCTTCCTCCCTCCCTTTCTTCCT CCCTCCCTCTGCATATTGCTGGCTACTGTGGCCAGCGACAATGTTGATTG CCCTTACAGCAGGGTTGCTAATCGCTTCCTCTCTTGATTTCATTTCTCCT CCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCC CTCCCTCCCTCAGGCTCCCACACGGACCTGGCTAAGGGCACCGCCCCCCA TTACAAGGGCGCGGTGAAACATTACGCATCCCTCGCCGAACGAGCTGTCT CGGCCTCGCACGTCATCGATATTTTCGCCTGCTCCTTAGACCAGGTACGA CCAGCGTGTCCTCCCTCCCTCCCTCCCTCCCTCCACCCCTCCCTCCCTCC CTTACTTTCCTTCCTTTCATTCCACCCCACCCTCTTTCCCCTCCTTTGTC GATCCATGGATGGCCACAACTTCTCACTCTTGGCTTTCCAGGGACTGATG GGCAAGCCACTTCACCTTTCCTCCCCCCTCCCTTTCTCTCCTCCAGGTGG GCATGATGGAGATGAAGGTCTGCGTGGAAAAGACGGGCGGGCTCATGGTC CTCGCGGACACTTTCTCGCAGGTGCGGTCTCAGGGAGGGGAAGTGGGCTG GCAGGGGTTGAGGGAGGGAGGGAGGGAGGGTGGAAAAATGGGAGGCTGTG CTGGATCGTGATTGGCTTACACCCACGTATATGGTCATCGCGGCCTCCCT TCCCTTCCCTTTCCCCTTCTCCCTGCCTCCCGCCCTCCCACCTTGTCCGC AGTCCGTGTTCAAGGAATCCCTCCTCCGCGTGTTGAAGAAGCTGCCCGCC GAGGTCCCTAAGGACGGGGGCCACCTGCAAATGGGATTTGCGGCTTCCCT CGAGGTACTTCCTTCCTTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCG TTCACCCGCCTTTGACTGTTGTTGTTCTTCTTCCTGTCGTGCACCTATGC TATGCCACTCGCCCAATCCAGCGCGCATCGACTCTTCCTGTCAGGTCCAA AAACAACGTAAGGGAGTCGCTCCGTCTCTCACTATTTTTTCCATCCCGCC CTCCCTTCCCCCTCTCCCTCCCTCCATCTCCCAGGTGCTGACCTCCCGAG AATTTAAGGTAGCGGGTGCCATCGGCCCATGCTCGTCCTTGAGGAAAATG GCGCCCAACGTGGCCGAGACTGCCATCGGGGAGGGGGGTAAGGTGGAAGG GAGGGAGGGAGGGAGAGAGGGAGGGAGGGAGCAAAAGCTAATCTATTGGT GCGTCGTGATATTTGAACAGTCATCCTCATCTTCCGCTTCCTGATCCCTC TTCTTCCTCTCTCCCTCCCTCCAAAGGCACCAACGCCTGGAGCATGGGCG GCATCGACCCGGCCGTGACGGTGGCCGTGTACTTCGAGGTGACCAATGCA GCCAACAACCCCCTCCCTCCCTCCAAGCGCCGCTTCATCCAGGTTTGTGC CGCTGATACCTAGTGCACACTCCTCACTCCCTTCCTTCCTCCTTATATGC AGATGATTGGTTGGAGGAGATACAAGCTTCTCATCCACTTTCTGCGCATA CATCCTCGTTTACACCCTCCCCTCCTCCCCTGCCCTCCCCCCCGCCCTCC CTCTCGGCCTCTGTTCTTCCCAGTTCATCACTCAGTACCAGCACGCCTCG GGCCGCTTCCGGCTGCGGGCCACCACCTACTCAGGAGGTACGAAGAGACG GAAGGAGAACGGGAGGGAAGACGAGGGAGGAAAGATGCTCCGAACACGCG TCAGCATTATTCCTTACCTCGTCCCTCCCTCCCTTCCCCCTTCCCTCCCT CTCTCCCTGCCTCCCCTCTCCCCCCCCTAGCCTGGCACAACGATGCGGCG GACATGGGCCCCGTCTCCCGGTCTTTTGACCAGGAGGCGGCGTGCGTTTT GATGACGCGAATTGCCGTGCAGCGGACAGGTAGGGAGGGAGGGAGGAAGG GAGGGAGGAAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGACGGA AGCACGCTTGCGGATAGGGTCACCTGAGCATAAAATCCTCCCATTTCCTG CTCACTCTATTTTTTAATACCTTTTTACTTGTTCTTATTATCTATATTAA TCATTTACTAACGCAGAGTCGGACGAAGAAGGCACAGTCCATGACGTGCT CCGCTGGGTAGATCGCTCGCTGGTACGTCCGCCCCCCCCTCTCTCTCTCT CCCTCCCTCCCTCCCTCCCTGTGTCATAACCTTCATCAGAAAAGCCCTCA TCCAAGCTCGGGAGCTACTTGAAGGATGATTTCTCCTCACCCCTCCTCCC TCCATCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCGACCCCTT GCCCTCCACCTCCCCCTGGCTCCCGCCCTCGGTCAGATCAAGCTCTCATC AAAGTTCGGGAGCTACCGGAAGGACGATCCGGCTTCTTTCGCCTTTCCCC AGGAGTTTGTCCTCTACCCCCAATTCATGGTAGGGAGGGAGGGAGGGAGG GAGGGAGGGAGGGAGGGAGGGAGGGAGGGGGGGAAGGGAAGGGAAGGTTT CCTTTGTGGCTGTCGAACGCATGTAGATCAGAGTCAATTAATAGCCCCCC CCCCCCTCCCTCTCGCCGTCTTGTCCGCCCATTCTACCTCCTGCCCTCCT TTAGTTCCACTTGCGGCGTTCTCAATTTTTGCAACTCTTCAATTCCTCGC CCGATGAGTCCAGCTACTACCGGTACCTCCCTTCCTCCCTCCTTCCCTAC CTCGTCATCACTTCCTCCCTCCCTCCCTCCCTCCCTCTTATCATTTGTTG TTGGCAGCCCCATTTCTAAAATGCTCACCTTCCCTCCTGCCCGCCCGCCC TTCCTCCCCTCCCCTCTCCCTCACTATCAGTACCATCCTGATCCGCGAGA ACGTGGCCAATTCCCTAGTCATGATCCAGCCCTCTCTTTTGTCCTACAGC TTCTCAGGTAACAAGGCAGGAGTGAGGCGGAAAGGAGGGAACGAGGGAGG GCGGGGAGGGGGGGGGCAATCGACTTATGCGAAAACACCATTTCTTTCTT TTCTTCAACCTCATCCATGCTGCTCACTGTCCAACCTCCTCTAGTCCCCT CCCTTCATCCCTCCCTAGCCCGCCCCCAACGCGACCGTCGGCTGCCATCT CACTCCCCCCCCCACCCTCCCTCTCTCCCTCCCTCCCTCCCCCCCTCCCT TCCTCCTCCCCTCAGCCCCCCCCCAACCGGTGATGCTCGACGCGACCAGC ATCCGGCCTGATTGCATCCTTCTCCTCGACACGTTCTTCCACGTCGTCGT CTTCCACGGAGAGACAGTGGCGGCCTGGCGGGCGGCAGGGTAAGGAGGAA GGGAAGAAGGAAAGATAAGAGGGTTTAAAGGAATTGTTTAGAAAAAATGA CCGCACGCATTTCTTCCCTCCCTTCCCCCTTCCTCCCTCTCTTCCTCCCT CCCTAGATACCAAAACACGGAGGAGCACATCAATTTCAAGAACCTGCTGG ATTCGCCTCAGCTCGACGCTCAGATGACAATGACCAGCCGCTTTCCCGTC CCAAGGTGCGTTTTCTTCCTCCTCCCCATTTTCCTTCCCTCCCTCCCTCC CTCCCTTCCTCGTTTCCTCCCACCGTCCTATCTAGAATGCGGTGCCGACA TGTCACAAATATCATAGAACTTCCAAAGGGCGAGATGTCATCACTCCCTT CTTAACCTTGCGCCTTATGTCCTTACCACTTACATCCCCTCCTCCTCACC CTCCCTCGATTCCTCTTTCTACTCCTCGTTGTTGCATGAACTTTGTGTAG GTTCATCGTTTGCGACCAGCACAAATCGCAGGCCCGCTTCCTGATGGCCA AGCTTAACCCTTCCATCACGCACCACACGGTGAGGCTAACAAGGGATGGA GGGAGAGAGAGAGAGGGGAGACAACTCATGCTTTTTCGTATATCTCCTTA CATTCCCCTTGGTGCTGCACCATTGTTATGCGCCGTTGCCTTACATTCCT CTTCCTTTCTTCCCTTTCCTTCCTCTTCCTTCCCCTACTCCTTTTTCAAA GGGCGAGGTGGGCATGGGCCAGGCCATGTTGACGGACGACGTGTCCCTCC GTGTTTTCATGGAGCACCTCATGAAGCTGGCCGTACAGACACCTTAGGCG TAGGTCGAAGGCAGGGGAGGAGAGAGGAATGGCGGGGAGGTGTGTGAGCC CGTGCCCTGCTGTCTTGTCGTAGCCGTGCTGTTGAGGGTGGTGTCTGATG TCGTCTCGGGATCAAGCGAATGGAAGAAGGCAGAAAAGGAGAGGGGAAAA TGGCGTAGAGGGGTGGAGTGCCCATCACACGGGCATGATCGGCTAGACAA AGGAAGAAGGGAGAGAGAGTGAGGACGAGTGCGGGTTCTACCTCTCATGT ATTTCCACTACTACGCTCGCCAATGTGTTCATGAGAAAGGGGAAGTGGAG AAGTCAAAGCGCAACCACGGTTCCTGACAAGCATGTCAGTGATTGAGCAA GCAAGCAACCAGGCCCAAAGCAAAGCAAAAGCATAAAAAGAAAGCATCAA AAGAAAGCATCATAAGATATCATAGGCCCCAAGGGAGCGGAGAGGGAACA ATAGTTGCTGCATAA
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Coding sequence (CDS) from alignment at chr6:1283360..1291024-

>NO06G04540.1 ID=NO06G04540.1|Name=NO06G04540.1|organism=Nannochloropsis oceanica|type=CDS|length=2469bp|location=Sequence derived from alignment at chr6:1283360..1291024- (Nannochloropsis oceanica)
ATGCACGACATCGACCTTCGCCCATACCCACACCACCCCATTCACCTACC
CATCATACTCCACAGAAGACGGCACCATCGAGACACCATGGATCCATACG
GACAGGGTGCACAGGGAGGCGGCTACTACATGCCTCAAGAGGACATGAGC
CCCTTGGCCTTGGAGGAGAAAGATGGTTTGCGCATGTCCTGGGGCGTATG
GCCCTCTTCTCGCATAGAGGTCACCCGCATCGTTGTTCCCGTAGCAGGAC
TATACACCCCCTTGAAGCGCATCGAGACCATGCCCGCACCTTTGGAGTAT
GACCCCATTCGATGCAATGGCTGCGGTGGCGTGCTCAACCCTCACTGCTC
TGTGGATTTTCGCACCAAGGTCTGGACCTGTCCCTTCTGCATGACACGCA
ATCACTTCCCCCCGCATTATGCCGAGAATATTTCGGAGCAGAATCTTCCC
GTGGAGCTGTTCTCCCAGTATACGACCGTGGAGTACGAGCTGCAGGTCCC
TCCTGCGGGCCCGCCCGTCTTCCTCCTCGTGGTTGACACCTGCCTGGAAG
ACGCCGAGCTTGAGCACCTGAAAGACTCCCTGCAACAGGTCCTGCAGTTG
TTGCCCGAGACGGCCTTGGTGGGTCTCATCACCTTCGGGACGCACGTCAT
GGTCCACGAGCTTGATTCTCCTGACTGTGCCCGCTCGTACGTCTTCCGGG
GTAGCAAGGAGTACACTCCGCAGCGGGTGCAAGACCTGTTGAACATCGCG
CCGCCCCTGCATGCCCAGGCCCCCGGCATGATGATGCAGCCCGGCATGGC
CGCCGACAGCATGGGAGGCCGCACGCCTGCCCTCGGTCGCTTCTTGTGCC
CTGTAGGCGACTGCTCTTTCAACCTCGAGAAGATCCTTGAGGACCTCCAG
CGTGACTCCTGGCCAGTGCCGTCGGACCAACGGCCCCAGCGCTGCACGGG
CGTGGCTCTGTCGGTGGCGACGGGCCTCCTCGAGTCCTCCTTTCCGCGAC
AGGGGGCGCGTGTGATGCTGTTTGTGGGGGGTCCGCCGACGGTGGGGCCG
GGGATGATCGTCGGACGGCCCAAGACAGAAGATATCCGCTCCCACACGGA
CCTGGCTAAGGGCACCGCCCCCCATTACAAGGGCGCGGTGAAACATTACG
CATCCCTCGCCGAACGAGCTGTCTCGGCCTCGCACGTCATCGATATTTTC
GCCTGCTCCTTAGACCAGGTGGGCATGATGGAGATGAAGGTCTGCGTGGA
AAAGACGGGCGGGCTCATGGTCCTCGCGGACACTTTCTCGCAGTCCGTGT
TCAAGGAATCCCTCCTCCGCGTGTTGAAGAAGCTGCCCGCCGAGGTCCCT
AAGGACGGGGGCCACCTGCAAATGGGATTTGCGGCTTCCCTCGAGGTGCT
GACCTCCCGAGAATTTAAGGTAGCGGGTGCCATCGGCCCATGCTCGTCCT
TGAGGAAAATGGCGCCCAACGTGGCCGAGACTGCCATCGGGGAGGGGGGC
ACCAACGCCTGGAGCATGGGCGGCATCGACCCGGCCGTGACGGTGGCCGT
GTACTTCGAGGTGACCAATGCAGCCAACAACCCCCTCCCTCCCTCCAAGC
GCCGCTTCATCCAGTTCATCACTCAGTACCAGCACGCCTCGGGCCGCTTC
CGGCTGCGGGCCACCACCTACTCAGGAGCCTGGCACAACGATGCGGCGGA
CATGGGCCCCGTCTCCCGGTCTTTTGACCAGGAGGCGGCGTGCGTTTTGA
TGACGCGAATTGCCGTGCAGCGGACAGAGTCGGACGAAGAAGGCACAGTC
CATGACGTGCTCCGCTGGGTAGATCGCTCGCTGATCAAGCTCTCATCAAA
GTTCGGGAGCTACCGGAAGGACGATCCGGCTTCTTTCGCCTTTCCCCAGG
AGTTTGTCCTCTACCCCCAATTCATGTTCCACTTGCGGCGTTCTCAATTT
TTGCAACTCTTCAATTCCTCGCCCGATGAGTCCAGCTACTACCGTACCAT
CCTGATCCGCGAGAACGTGGCCAATTCCCTAGTCATGATCCAGCCCTCTC
TTTTGTCCTACAGCTTCTCAGCCCCCCCCCAACCGGTGATGCTCGACGCG
ACCAGCATCCGGCCTGATTGCATCCTTCTCCTCGACACGTTCTTCCACGT
CGTCGTCTTCCACGGAGAGACAGTGGCGGCCTGGCGGGCGGCAGGATACC
AAAACACGGAGGAGCACATCAATTTCAAGAACCTGCTGGATTCGCCTCAG
CTCGACGCTCAGATGACAATGACCAGCCGCTTTCCCGTCCCAAGGTTCAT
CGTTTGCGACCAGCACAAATCGCAGGCCCGCTTCCTGATGGCCAAGCTTA
ACCCTTCCATCACGCACCACACGGGCGAGGTGGGCATGGGCCAGGCCATG
TTGACGGACGACGTGTCCCTCCGTGTTTTCATGGAGCACCTCATGAAGCT
GGCCGTACAGACACCTTAG
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Synonyms
Publications