NO06G04510.1, NO06G04510.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO06G04510.1
Unique Name	NO06G04510.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	2799
Alignment location	chr6:1272938..1277514 +

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr6	genome	chr6:1272938..1277514 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO06G04510.1 vs.
Match: EWM26429.1 (ketose-bisphosphate aldolase class-ii-like protein [Nannochloropsis gaditana])

HSP 1 Score: 916.4 bits (2367), Expect = 7.000e-263
Identity = 496/667 (74.36%), Postives = 552/667 (82.76%), Query Frame = 0

Query:  253 LTINDVHYMATTPASLLPVHLTPFAHDKAFGFETSNLKDWVEQKLSGRVQASDVAAITLDDIRRGGPTFVRDKLLALSRSSTNISTGTNSVFVVVNAVTRSDLECAVLGSLMAEDA-----TEG--GASIVYRTAADWVAVRAGLPPLPPLAASAFHPTFPCPPSL-LHPPSAKGGLVVVGSYVPKSSEQLTYLLEGGQIGKMEGVEVSVDALLESKTQREAEVKRVTAAIEQETNKGKDVVIYTTRQLRQEDGAGGLISGMTVSESLVEIVKGLKTRPQFLIAKGGITSNDVAVKALGIKRAMVLGPILPGVPVWECGDESKFPGMKYVVFPGNVGSTQALLEAVQKLSHHQVSSSPPLSSA--------IPTRPLFIPSSSSRTLDLVEAARAKGHAVGAFNVYNLEGVRAVVLAAAATDSSAILQVHPSSFDFGGAPLLELCRAARIYLEK-GDRPGEEDRNRIAVHLDHAHEAASIERVLALDLVDSVMCDGSALPYDENIAWTAKMTSLAHSKGVPVEAELGRLAGEEDGLSVAEKEAKMTDPAQVPDFVAQTGVDLVAVTIGNVHGRYATNPPVLDLQRLVDIRKATDRPLVLHGASGLPPSVVHATMKMGGICKFNVNTEVREAAMGVVREGKAKDVLPLMVATGEAMQLVIEQKMRLFK 903
            L INDVHYM T+PAS+LPVHLTPFA DKAFGF TSNLKDW   KL G V+A DVA+ITLDDIRRGGPT VRDKLL+L+RS+T  S GT   +VVVNAVTR DLEC VLGSL AEDA     TEG  G  +VYRTAADWVAVRAGL PLPPL ASA  P    PP L  H PSA+GGL+VVGSYVPKSSEQL +LLE G   + +G+E+ VD L + +T R  E++RVTAAIE+  N GK VVI+T+RQLRQEDGAGGLISGM VS+S+VEIVK L+TRP FLIAKGGITSNDVAVK LG+KRAMVLGPILPGVPVWECG+ESKFPGMKYVVFPGNVGS+QAL EA QKL     +S+PP S +         PTRP+F  +SSSRTLDL+EAARAKG AVGAFNVYNLEGVRAVV AAAAT+SSAILQVHPSS +FGG PLLELCRA R ++E+ G   G ++++ IAVHLDHA+EAA IE+VLA  LVDSVMCDGSA PY+EN++WTA+MT LAHSKG+PVEAELGRLAGEEDGLSV EKEAKMTDP QVPDFV QT +D+VAVTIGNVHGRYATNPPVLDL RL DIR ATDR LVLHGASGLPP VVHAT+ +G ICKFNVNTEVREAAM V+REGKAKDVLPLM  TGEAMQ VIE KMRLFK
Sbjct:  159 LKINDVHYMTTSPASVLPVHLTPFAQDKAFGFSTSNLKDW---KLGGGVKAEDVASITLDDIRRGGPTGVRDKLLSLARSNTT-SLGT---YVVVNAVTREDLECVVLGSLQAEDAGLEGSTEGEPGIRMVYRTAADWVAVRAGLSPLPPLPASALRP----PPDLPSHVPSAEGGLIVVGSYVPKSSEQLCFLLENGGKEQFQGIEICVDTLFQDETARLGEMERVTAAIEEGINAGKHVVIFTSRQLRQEDGAGGLISGMKVSDSVVEIVKNLRTRPLFLIAKGGITSNDVAVKGLGLKRAMVLGPILPGVPVWECGEESKFPGMKYVVFPGNVGSSQALFEAAQKLCFPPSTSTPPSSDSKTSLASCVTPTRPVF--ASSSRTLDLLEAARAKGEAVGAFNVYNLEGVRAVVRAAAATNSSAILQVHPSSLEFGGQPLLELCRAGRFFVEEMGTMRGSKEKDTIAVHLDHANEAAVIEQVLATQLVDSVMCDGSAKPYEENVSWTAQMTRLAHSKGIPVEAELGRLAGEEDGLSVQEKEAKMTDPLQVPDFVEQTDIDMVAVTIGNVHGRYATNPPVLDLARLADIRAATDRLLVLHGASGLPPKVVHATIAIGAICKFNVNTEVREAAMQVIREGKAKDVLPLMQTTGEAMQRVIENKMRLFK 812

The following BLAST results are available for this feature:

BLAST of NO06G04510.1 vs.

BLAST of NO06G04510.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
EWM26429.1	7.000e-263	74.36	ketose-bisphosphate aldolase class-ii-like protein...	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO06G04510	NO06G04510	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO06G04510.1	NO06G04510.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO06G04510.1.cds1	NO06G04510.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO06G04510.1.cds2	NO06G04510.1.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO06G04510.1.cds3	NO06G04510.1.cds3	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO06G04510.1.cds4	NO06G04510.1.cds4	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO06G04510.1.cds5	NO06G04510.1.cds5	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO06G04510.1.cds6	NO06G04510.1.cds6	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO06G04510.1.cds7	NO06G04510.1.cds7	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO06G04510.1.cds8	NO06G04510.1.cds8	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO06G04510.1.cds9	NO06G04510.1.cds9	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO06G04510.1.cds10	NO06G04510.1.cds10	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO06G04510.1.cds11	NO06G04510.1.cds11	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO06G04510.1.cds12	NO06G04510.1.cds12	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO06G04510.1.cds13	NO06G04510.1.cds13	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO06G04510.1.cds14	NO06G04510.1.cds14	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO06G04510.1.cds15	NO06G04510.1.cds15	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr6:1272938..1277514+
coding sequence from alignment at chr6:1272938..1277514+

mRNA sequence

>NO06G04510.1 ID=NO06G04510.1|Name=NO06G04510.1|organism=Nannochloropsis oceanica|type=mRNA|length=2799bp
CCCCCCGCCACCCTCCAAATGCTCATCTTGCGCCGCACCAATAGCACGCT
TTTCAGCACCAGCAGCGGGCTGCTTCAGCAGCGAAGACCATTGAGACACA
GCCAGCAGCAGCCGCAGTCTGCTGCTTTGTCGACTGCCTTGTCCTTCTCG
GCTGCTGGCTCGCGGAGCCAGCAGCATGATCATCATCCATTCCAGTTTCA
TTCCTACCCATTCCTTTGCATGCCTCTGCCCTCGTCCTCCTCTCGCTTTT
CTACTAAGTCAGCACTGGCACCCCCTGAAGCCCTCCCCCTCGCCACCCTC
CTCTCCACGCTGCCCCCCACCCGCCCATCTTGTCTGGCCGAGATCCAGCG
GCGCTTGGCCCAGCAAGGAAAGGACAAGCACAAAAAGCTTGTCATTGTTG
ATGATGATCCCACTGGCACTCAAAGCGTGCGAGGCTTCCCTGTCCTGGCT
GAATGGACGCCAGAAGCCCTTGCCCGCGAAATAAGTGATGAAAGTACTCC
GGGCTTCTTCCTTCTATCCAATATAAGAGCTATGGCACCCCTGGAGGCCA
GAGTCGTCCTGAAAGACATACGACGAGGGCTGGACGAAGCACTAAAGCGC
TTGGGTCGGTCAACAGACTCCATCACAGTAATTTCTCGCTCTGATTCGAC
ATTGCGCGGTCACTTCCCTCTGGACGTGGAGCTGCTTTGCCCTCCCTCGT
CCGCAGGCAAAGGTATAAGAGGAGGAGGCAATGTTCTGACGCTGGTTGCA
CCTTACTTCGAGGCAGGAGGTCGACTGACGATCAACGACGTGCACTACAT
GGCCACCACTCCCGCTTCCCTCCTGCCCGTCCACCTCACGCCCTTCGCCC
ACGACAAGGCCTTTGGCTTCGAGACGTCCAACCTTAAAGACTGGGTGGAG
CAAAAGCTGTCCGGGCGAGTGCAGGCCAGCGATGTAGCTGCCATCACGCT
CGATGACATTCGCCGCGGTGGCCCGACTTTCGTCCGTGACAAGCTCCTCG
CCCTTTCTCGCAGTAGCACCAACATCAGCACCGGCACCAACAGCGTCTTT
GTGGTGGTCAACGCCGTGACTCGGAGCGACTTAGAATGCGCGGTACTAGG
GAGTCTCATGGCCGAGGACGCGACGGAGGGAGGGGCAAGCATCGTCTACC
GCACTGCGGCTGACTGGGTCGCTGTACGGGCGGGTCTTCCCCCTCTTCCT
CCTTTGGCCGCCTCGGCCTTCCACCCCACCTTTCCCTGTCCACCTTCTCT
TCTCCATCCTCCTTCTGCCAAGGGAGGGCTGGTGGTGGTGGGTTCATACG
TGCCCAAGTCTTCGGAGCAGCTGACTTACCTTCTAGAGGGGGGCCAGATC
GGGAAGATGGAGGGCGTGGAAGTATCAGTCGATGCACTCCTGGAAAGTAA
GACCCAGCGGGAGGCCGAGGTGAAGCGAGTCACCGCCGCCATTGAGCAGG
AGACGAACAAGGGCAAGGATGTCGTTATCTACACTACCCGTCAGCTCCGC
CAAGAAGACGGCGCCGGTGGGCTCATCTCAGGCATGACAGTCTCCGAGTC
TCTGGTCGAGATCGTCAAGGGCCTCAAGACCAGACCCCAATTCCTCATTG
CCAAGGGTGGAATCACTTCTAACGACGTGGCGGTCAAAGCATTGGGCATC
AAGAGGGCCATGGTCCTGGGCCCTATCCTTCCAGGCGTTCCTGTGTGGGA
GTGTGGAGATGAGAGCAAGTTTCCGGGAATGAAGTACGTCGTCTTTCCCG
GCAATGTCGGCTCAACCCAAGCACTCCTTGAGGCCGTGCAAAAACTTTCC
CACCATCAAGTATCCTCTTCTCCCCCTCTCTCCTCAGCGATCCCCACCCG
CCCCCTTTTCATCCCCTCCTCCTCCTCCCGTACCCTCGACCTGGTGGAGG
CCGCCCGCGCCAAGGGCCACGCCGTCGGCGCCTTTAATGTCTACAACCTG
GAAGGTGTAAGGGCTGTCGTCCTCGCAGCTGCTGCCACCGACAGCTCGGC
CATCTTGCAGGTCCACCCTTCTTCGTTTGACTTTGGAGGCGCCCCGCTTT
TAGAACTCTGTCGGGCGGCAAGAATTTATTTGGAGAAGGGGGACAGGCCT
GGAGAGGAGGACAGGAACAGAATTGCGGTACATCTGGACCATGCCCACGA
AGCGGCATCAATTGAGCGGGTGCTGGCCTTAGATCTGGTCGACTCCGTTA
TGTGTGACGGCTCCGCACTACCCTATGATGAGAACATCGCCTGGACCGCG
AAAATGACAAGCCTGGCCCACAGCAAGGGCGTTCCCGTGGAGGCAGAGCT
TGGTCGTCTCGCCGGCGAGGAAGACGGGTTGAGCGTCGCGGAGAAAGAGG
CGAAAATGACGGACCCCGCGCAGGTGCCAGATTTTGTGGCGCAGACGGGC
GTGGACCTAGTCGCTGTAACGATTGGGAATGTGCACGGCCGTTATGCGAC
AAACCCGCCGGTTTTGGACTTGCAGCGGTTGGTGGACATTCGCAAAGCGA
CTGATCGACCCCTTGTGTTGCATGGCGCGTCAGGACTACCTCCAAGTGTG
GTGCATGCAACTATGAAGATGGGGGGAATCTGCAAGTTTAATGTGAATAC
GGAGGTCAGGGAGGCGGCGATGGGCGTGGTTCGGGAAGGGAAGGCCAAGG
ATGTGCTGCCGTTGATGGTGGCGACGGGTGAAGCTATGCAGCTTGTAATT
GAGCAGAAGATGCGACTCTTCAAGCCGACTCAGTAAAAGTTACAAGCAGG
ACGGAAGAGTGGACTCAGATGGGAAAATACAAATATTTATGAAGGTGCA

protein sequence of NO06G04510.1

>NO06G04510.1-protein ID=NO06G04510.1-protein|Name=NO06G04510.1|organism=Nannochloropsis oceanica|type=polypeptide|length=906bp
MLILRRTNSTLFSTSSGLLQQRRPLRHSQQQPQSAALSTALSFSAAGSRS
QQHDHHPFQFHSYPFLCMPLPSSSSRFSTKSALAPPEALPLATLLSTLPP
TRPSCLAEIQRRLAQQGKDKHKKLVIVDDDPTGTQSVRGFPVLAEWTPEA
LAREISDESTPGFFLLSNIRAMAPLEARVVLKDIRRGLDEALKRLGRSTD
SITVISRSDSTLRGHFPLDVELLCPPSSAGKGIRGGGNVLTLVAPYFEAG
GRLTINDVHYMATTPASLLPVHLTPFAHDKAFGFETSNLKDWVEQKLSGR
VQASDVAAITLDDIRRGGPTFVRDKLLALSRSSTNISTGTNSVFVVVNAV
TRSDLECAVLGSLMAEDATEGGASIVYRTAADWVAVRAGLPPLPPLAASA
FHPTFPCPPSLLHPPSAKGGLVVVGSYVPKSSEQLTYLLEGGQIGKMEGV
EVSVDALLESKTQREAEVKRVTAAIEQETNKGKDVVIYTTRQLRQEDGAG
GLISGMTVSESLVEIVKGLKTRPQFLIAKGGITSNDVAVKALGIKRAMVL
GPILPGVPVWECGDESKFPGMKYVVFPGNVGSTQALLEAVQKLSHHQVSS
SPPLSSAIPTRPLFIPSSSSRTLDLVEAARAKGHAVGAFNVYNLEGVRAV
VLAAAATDSSAILQVHPSSFDFGGAPLLELCRAARIYLEKGDRPGEEDRN
RIAVHLDHAHEAASIERVLALDLVDSVMCDGSALPYDENIAWTAKMTSLA
HSKGVPVEAELGRLAGEEDGLSVAEKEAKMTDPAQVPDFVAQTGVDLVAV
TIGNVHGRYATNPPVLDLQRLVDIRKATDRPLVLHGASGLPPSVVHATMK
MGGICKFNVNTEVREAAMGVVREGKAKDVLPLMVATGEAMQLVIEQKMRL
FKPTQ*

mRNA from alignment at chr6:1272938..1277514+

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO06G04510.1 ID=NO06G04510.1|Name=NO06G04510.1|organism=Nannochloropsis oceanica|type=mRNA|length=4577bp|location=Sequence derived from alignment at chr6:1272938..1277514+ (Nannochloropsis oceanica)
CCCCCCGCCACCCTCCAAATGCTCATCTTGCGCCGCACCAATAGCACGCT
TTTCAGCACCAGCAGCGGGCTGCTTCAGCAGCGAAGACCATTGAGACACA
GCCAGCAGCAGCCGCAGTCTGCTGCTTTGTCGACTGCCTTGTCCTTCTCG
GCTGCTGGCTCGCGGAGCCAGCAGCATGATCATCATCCATTCCAGTTTCA
TTCCTACCCATTCCTTTGCATGCCTCTGCCCTCGTCCTCCTCTCGCTTTT
CTACTAAGTCAGCACTGGTACGTGAATAAGCCCGAGCCGCCCGCCTTCTA
TTGCCCTCGCAATAGACTCATCCATAATCTCAATAACCAGGCACCCCCTG
AAGCCCTCCCCCTCGCCACCCTCCTCTCCACGCTGCCCCCCACCCGCCCA
TCTTGTCTGGCCGAGATCCAGCGGCGCTTGGCCCAGCAAGGAAAGGACAA
GCACAAAAAGCTTGTCATTGTTGATGGTGAGATTACCGGGGCGAAGGAAT
CGCTTGTAGACGTCCCTTTTATCCCCCTCATCACTCCCTTTCTACCCCCT
TCCTTCCCTCCCCACTTAGATGATCCCACTGGCACTCAAAGCGTGCGAGG
CTTCCCTGTCCTGGCTGAATGGACGCCAGAAGCCCTTGCCCGCGAAATAA
GTGATGAAAGTACTCCGGGCTTCTTCCTTCTATCCAATATAAGGTGCGAG
ATACTTGCATGGGATGGTGGGAGGCAGGGAGGCAGGGAGGCAGGGTAGAA
GCGAGAGCACGCCATTGTGGAAGATATCTTACAGTTCCTTTTCCATTCGT
AATTGAGTAGAGCTATGGCACCCCTGGAGGCCAGAGTCGTCCTGAAAGAC
ATACGACGAGGGCTGGACGAAGCACTAAAGGTACGTACCGTCTTCTCCTT
CTCTCCCATCCTCCCTCTCTCCCCTCCTCCCCCCATCTCTCCTCGCTCTC
CGTCGCATCGCTCAAATCTTTATTCCTCTCGCCCTCATTCTCGCCATACC
TCTTTCTGTAGCGCTTGGGTCGGTCAACAGACTCCATCACAGTAATTTCT
CGCTCTGATTCGACATTGCGCGGTACGTCCCTCCTTCCCTCCCTCCATCC
GTGTCGCCTCCCCTCACCATCCCCTCCCTTTGATTCTCGTTTGGCAGGTC
ACTTCCCTCTGGACGTGGAGCTGCTTTGCCCTCCCTCGTCCGCAGGCAAA
GGTATAAGAGGAGGAGGCAATGTTCTGACGCTGGTTGCACCTTACTTCGA
GGCAGGAGGTCGACTGACGGTACGCCCTCCGTCCCTACCCCCGTCCCTTC
CTCTTTCTTGGCCTGTTTCCGCGCCCTTTTCCTCACTGACTGTCCATTCA
CGGCCACCTTTCCTCCATCCATTTATTTGTGCCTGTCTCGACCCAGATCA
ACGACGTGCACTACATGGCCACCACTCCCGCTTCCCTCCTGCCCGTCCAC
CTCACGCCCTTCGCCCACGACAAGGCCTTTGGCTTCGAGACGTCCAACCT
TAAAGACTGGGTGAATGGAAAGGAAGGGATCGAAGGAGCGAGGGGCATAA
GGCAGGAAGAGTGCATGAGCGAGGGGGGGAGAGAGATGAAAGAAGGGAGG
GCAGCACGGATTCTAACCCCATCCTTATTCATTTATCTCAAAGGTGGAGC
AAAAGCTGTCCGGGCGAGTGCAGGCCAGCGATGTAGCTGCCATCACGCTC
GATGACATTCGGTACGCGCCTACCCTTCTTCCATTTTCTCCTACGATTGC
AACCATTCACCCACCTACTCTCCCTTCCTCTCTCCCTCTCTCCCTTCCTA
GCCGCGGTGGCCCGACTTTCGTCCGTGACAAGCTCCTCGCCCTTTCTCGC
AGTAGCACCAACATCAGCACCGGCACCAACAGCGTCTTTGTGGTGGTCAA
CGCCGTGACTCGGAGCGACTTAGAATGCGCGGTACTAGGGAGTCTCATGG
CCGAGGACGCGACGGAGGGAGGGGCAAGCATCGTGTACGTATATGGAGGC
TTTGAAGGTGGGGGGAAAGACTCCTATTTTGGTCGTATGTAGCAGCAACC
ATGATCATATACACTCCTCCCTCCCTCTTTGCCTCCCTTCTTTCCTCCCT
CCCTTGGCAGCTACCGCACTGCGGCTGACTGGGTCGCTGTACGGGCGGGT
CTTCCCCCTCTTCCTCCTTTGGCCGCCTCGGCCTTCCACCCCACCTTTCC
CTGTCCACCTTCTCTTCTCCATCCTCCTTCTGCCAAGGGAGGGCTGGTGG
TGGTGGGTTCATACGTGCCCAAGTCTTCGGAGCAGCTGACTTACCTTCTA
GAGGGGGGCCAGATCGGGAAGATGGAGGTGAGGGGACGAGGGTGGGAGAA
AAGGACAGAAGAGGAGGGTCGGGCGTGAGTGTTGCCCGCCAATACATTTG
TCTGGCTTTCTTGTTCTATTTACCTTTTTATCTATATTTATATCCCTTCT
TTCCCCCCTCCCCCTGTCCTTCTTCAGGGCGTGGAAGTATCAGTCGATGC
ACTCCTGGAAAGTAAGACCCAGCGGGAGGCCGAGGTGAAGCGAGTCACCG
CCGCCATTGAGCAGGAGACGAACAAGGGCAAGGATGTCGTTATCTACACT
ACCCGTCAGGTAGGCAAGTCATCCCTCTATCCCTCCCTTGTGCCTTCCCC
TCCCCACCTTTTGATATTTCTACCCTTCTCCTTACGCCCGCGTTTGTAAA
AGCTTCTCTGCGGGCGATGACACCGGTTCTCACCTCCCTATTTCTCCCTC
CCTCCCTCCCTCCCTCCCCAGCTCCGCCAAGAAGACGGCGCCGGTGGGCT
CATCTCAGGCATGACAGTCTCCGAGTCTCTGGTCGAGATCGTCAAGGGCC
TCAAGACCAGGTAGGGGGGGAGGGAGGGGCGGAGCGAACGTTGGAAGAAA
TTGTGGAACTAAAAGCAATCTCAGTCCTTCACACCCTCCTTTTCTCCCTG
GACCTGGTAGCCGAGGGTGGAGTCGTCTTCTATGACCTGACTGTCAAAAT
TGACGGAAGGCATATCTTAACCTCTCGCCCCTTTTTCATAAGTGCTTCCT
TTCCTTTCTGCCTATCCTCCTCAGACCCCAATTCCTCATTGCCAAGGGTG
GAATCACTTCTAACGACGTGGCGGTCAAAGCATTGGGCATCAAGAGGGCC
ATGGTCCTGGGCCCTATCCTTCCAGGCGTTCCTGTGTGGGAGTGTGGAGA
TGAGAGCAAGTTTCCGGGAATGAAGGTGACGCGAATGGGAAGGGGGATGG
ATGGGATGGGCGGGAATTGGTTGGCGACTATTGCCCCTTAAAGTCGGCAG
TGCTTCCAAAAAATGCTCAATTCCTCCCTTTCTCATGCCCTTTATAAATT
CCCCTATTCCTCAGTACGTCGTCTTTCCCGGCAATGTCGGCTCAACCCAA
GCACTCCTTGAGGCCGTGCAAAAACTTTCCCACCATCAAGTATCCTCTTC
TCCCCCTCTCTCCTCAGCGATCCCCACCCGCCCCCTTTTCATCCCCTCCT
CCTCCTCCCGTACCCTCGACCTGGTGGAGGCCGCCCGCGCCAAGGGCCAC
GCCGTCGGCGCCTTTAATGTCTACAACCTGGAAGGTGTAAGGGCTGTCGT
CCTCGCAGCTGCTGCCACCGACAGCTCGGCCATCTTGCAGGTCCACCCTT
CTTCGTTTGACTTTGGAGGCGCCCCGCTTTTAGAACTCTGTCGGGCGGCA
AGAATTTATTTGGAGAAGGGGGACAGGCCTGGAGAGGAGGACAGGAACAG
AATTGCGGTACATCTGGACCATGCCCACGAAGCGGCATCAATTGAGCGGG
TGCTGGTAAGAGTCTTTTGTAAAAGAGGGTGTAGGTGAACAAGATATTTG
TGTGGCATGCGCATACTCCTACGTACCATTTCTCTTCACCAAGTCTTCCG
ATCATTTCTAAACATCCATTAAATTTCTTTTTATAATTTTTCATTCCTCT
CAGGCCTTAGATCTGGTCGACTCCGTTATGTGTGACGGCTCCGCACTACC
CTATGATGAGAACATCGCCTGGACCGCGAAAATGACAAGCCTGGCCCACA
GCAAGGGCGTTCCCGTGGAGGCAGAGCTTGGTCGTCTCGCCGGCGAGGAA
GACGGGTTGAGCGTCGCGGAGAAAGAGGCGAAAATGACGGACCCCGCGCA
GGTGCCAGATTTTGTGGCGCAGACGGGCGTGGACCTAGTCGCTGTAACGA
TTGGGAATGTGCACGGCCGTTATGCGACAAACCCGCCGGTTTTGGACTTG
CAGCGGTTGGTGGACATTCGCAAAGCGACTGATCGACCCCTTGTGTTGCA
TGGCGCGTCAGGACTACCTCCAAGTGTGGTGCATGCAACTATGAAGATGG
GGGGAATCTGCAAGTTTAATGTGAATACGGAGGTCAGGGAGGCGGCGATG
GGCGTGGTTCGGGAAGGGAAGGCCAAGGATGTGCTGCCGTTGATGGTGGC
GACGGGTGAAGCTATGCAGCTTGTAATTGAGCAGAAGATGCGACTCTTCA
AGCCGACTCAGTAAAAGTTACAAGCAGGACGGAAGAGTGGACTCAGATGG
GAAAATACAAATATTTATGAAGGTGCA

Coding sequence (CDS) from alignment at chr6:1272938..1277514+

>NO06G04510.1 ID=NO06G04510.1|Name=NO06G04510.1|organism=Nannochloropsis oceanica|type=CDS|length=2718bp|location=Sequence derived from alignment at chr6:1272938..1277514+ (Nannochloropsis oceanica)
ATGCTCATCTTGCGCCGCACCAATAGCACGCTTTTCAGCACCAGCAGCGG
GCTGCTTCAGCAGCGAAGACCATTGAGACACAGCCAGCAGCAGCCGCAGT
CTGCTGCTTTGTCGACTGCCTTGTCCTTCTCGGCTGCTGGCTCGCGGAGC
CAGCAGCATGATCATCATCCATTCCAGTTTCATTCCTACCCATTCCTTTG
CATGCCTCTGCCCTCGTCCTCCTCTCGCTTTTCTACTAAGTCAGCACTGG
CACCCCCTGAAGCCCTCCCCCTCGCCACCCTCCTCTCCACGCTGCCCCCC
ACCCGCCCATCTTGTCTGGCCGAGATCCAGCGGCGCTTGGCCCAGCAAGG
AAAGGACAAGCACAAAAAGCTTGTCATTGTTGATGATGATCCCACTGGCA
CTCAAAGCGTGCGAGGCTTCCCTGTCCTGGCTGAATGGACGCCAGAAGCC
CTTGCCCGCGAAATAAGTGATGAAAGTACTCCGGGCTTCTTCCTTCTATC
CAATATAAGAGCTATGGCACCCCTGGAGGCCAGAGTCGTCCTGAAAGACA
TACGACGAGGGCTGGACGAAGCACTAAAGCGCTTGGGTCGGTCAACAGAC
TCCATCACAGTAATTTCTCGCTCTGATTCGACATTGCGCGGTCACTTCCC
TCTGGACGTGGAGCTGCTTTGCCCTCCCTCGTCCGCAGGCAAAGGTATAA
GAGGAGGAGGCAATGTTCTGACGCTGGTTGCACCTTACTTCGAGGCAGGA
GGTCGACTGACGATCAACGACGTGCACTACATGGCCACCACTCCCGCTTC
CCTCCTGCCCGTCCACCTCACGCCCTTCGCCCACGACAAGGCCTTTGGCT
TCGAGACGTCCAACCTTAAAGACTGGGTGGAGCAAAAGCTGTCCGGGCGA
GTGCAGGCCAGCGATGTAGCTGCCATCACGCTCGATGACATTCGCCGCGG
TGGCCCGACTTTCGTCCGTGACAAGCTCCTCGCCCTTTCTCGCAGTAGCA
CCAACATCAGCACCGGCACCAACAGCGTCTTTGTGGTGGTCAACGCCGTG
ACTCGGAGCGACTTAGAATGCGCGGTACTAGGGAGTCTCATGGCCGAGGA
CGCGACGGAGGGAGGGGCAAGCATCGTCTACCGCACTGCGGCTGACTGGG
TCGCTGTACGGGCGGGTCTTCCCCCTCTTCCTCCTTTGGCCGCCTCGGCC
TTCCACCCCACCTTTCCCTGTCCACCTTCTCTTCTCCATCCTCCTTCTGC
CAAGGGAGGGCTGGTGGTGGTGGGTTCATACGTGCCCAAGTCTTCGGAGC
AGCTGACTTACCTTCTAGAGGGGGGCCAGATCGGGAAGATGGAGGGCGTG
GAAGTATCAGTCGATGCACTCCTGGAAAGTAAGACCCAGCGGGAGGCCGA
GGTGAAGCGAGTCACCGCCGCCATTGAGCAGGAGACGAACAAGGGCAAGG
ATGTCGTTATCTACACTACCCGTCAGCTCCGCCAAGAAGACGGCGCCGGT
GGGCTCATCTCAGGCATGACAGTCTCCGAGTCTCTGGTCGAGATCGTCAA
GGGCCTCAAGACCAGACCCCAATTCCTCATTGCCAAGGGTGGAATCACTT
CTAACGACGTGGCGGTCAAAGCATTGGGCATCAAGAGGGCCATGGTCCTG
GGCCCTATCCTTCCAGGCGTTCCTGTGTGGGAGTGTGGAGATGAGAGCAA
GTTTCCGGGAATGAAGTACGTCGTCTTTCCCGGCAATGTCGGCTCAACCC
AAGCACTCCTTGAGGCCGTGCAAAAACTTTCCCACCATCAAGTATCCTCT
TCTCCCCCTCTCTCCTCAGCGATCCCCACCCGCCCCCTTTTCATCCCCTC
CTCCTCCTCCCGTACCCTCGACCTGGTGGAGGCCGCCCGCGCCAAGGGCC
ACGCCGTCGGCGCCTTTAATGTCTACAACCTGGAAGGTGTAAGGGCTGTC
GTCCTCGCAGCTGCTGCCACCGACAGCTCGGCCATCTTGCAGGTCCACCC
TTCTTCGTTTGACTTTGGAGGCGCCCCGCTTTTAGAACTCTGTCGGGCGG
CAAGAATTTATTTGGAGAAGGGGGACAGGCCTGGAGAGGAGGACAGGAAC
AGAATTGCGGTACATCTGGACCATGCCCACGAAGCGGCATCAATTGAGCG
GGTGCTGGCCTTAGATCTGGTCGACTCCGTTATGTGTGACGGCTCCGCAC
TACCCTATGATGAGAACATCGCCTGGACCGCGAAAATGACAAGCCTGGCC
CACAGCAAGGGCGTTCCCGTGGAGGCAGAGCTTGGTCGTCTCGCCGGCGA
GGAAGACGGGTTGAGCGTCGCGGAGAAAGAGGCGAAAATGACGGACCCCG
CGCAGGTGCCAGATTTTGTGGCGCAGACGGGCGTGGACCTAGTCGCTGTA
ACGATTGGGAATGTGCACGGCCGTTATGCGACAAACCCGCCGGTTTTGGA
CTTGCAGCGGTTGGTGGACATTCGCAAAGCGACTGATCGACCCCTTGTGT
TGCATGGCGCGTCAGGACTACCTCCAAGTGTGGTGCATGCAACTATGAAG
ATGGGGGGAATCTGCAAGTTTAATGTGAATACGGAGGTCAGGGAGGCGGC
GATGGGCGTGGTTCGGGAAGGGAAGGCCAAGGATGTGCTGCCGTTGATGG
TGGCGACGGGTGAAGCTATGCAGCTTGTAATTGAGCAGAAGATGCGACTC
TTCAAGCCGACTCAGTAA

Synonyms

Publications