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Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
chr6 | genome | chr6:1268345..1272609 - |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO06G04500.3 ID=NO06G04500.3|Name=NO06G04500.3|organism=Nannochloropsis oceanica|type=mRNA|length=3028bp AGGCGCCGGAAACTAGGCATCAGTCGGACCTGCATCCTTGACCTTATAGC GTCTTCCCTCTTGTGGCGGCCACACGTTTCCCAGAACTAAAAGATGGCCA GAAAGAAGAAACATCACCACCACCACCAGGACAAGGAGTATAGCGAGCAG GATATTGACGCCTTACATGAAATGTTAGATGGAAAAGTGCCGTGGGGCAC GGTAAGGGCGGTTTTATCACGCGAGGATGGAGACGTGGCCAGGTAGGAAG GGAGGGTGGATGGGACATTAGGGACAGATAGAAGATGGGCACGCAAAAAT CGCATCTTGAAAGAACCGATGAAGCAAATCTTAATTTACTTGATGGAAAA GTATAGATTGTACACGTAAAGCCGCCCTGTACCGAAGGGTAAGAGGGAGG GAAGGCGGAAGCAGGGATGAATTGATGTGAGAAATTGCATGCTTATCACT TACTCTTTTCAATGTATGCAGAGCTCTGGGCATATTGCTCCTTATAACAG ATGAAGGTAGCAGCGCTGTGGGATGCGACTCCGGCGCTTCGGCTGCCGGT GCCGCCGCCGCTGCAGCTGCTGCTGCGGAGGTGGAAAAGGTGGAAGGAGA GGTGGGGAAGGAGGGAGGGAAGGAGAGCAGCAAAGAGGTTCGGGACGAGG AGCAGGAGCAGGAAAACGACGACAGTGCTGCCAATTTATCCTCAGCGGCG TCAAAAATTACCAACCCTTCTTTCATAACTCCTCCTCATCTTCCTTCTTC TCCCTTCCCTCCCTCAGTCGCCCGCCCCTCACCGGGAGTGGCGGGACGGA GGGAAGGCCTGAGCTTAAAGGCGTGGGATGAACTGTGCCGGATCTTCGAA GGCGTTCTGTCGCTAGATGCTCTGCACAGAGTGTACGAGGAGGCAGAGGG GCTGGAGGGAGCAGTCGAGGTAGGAAGGGAGAGAGGAGAGAGGAGGGGAG GAGGGAAAGGAGGGTGGAAGCTGTGGGCGATGGTTTGATCTCTCCGCATA CGACTGACAGGAGGTGGAACGGATGCTGCAGCAGCAAGACGAGGTCGAGG AATCAGGGGATGACGACAACGAGGGCCTGGTGGGAGGAGGGGGGAGCAGA GGAGAAGGGGGGGGGGGAAGAGGAGGAGGGGAAGAGGAGGAAAAGCTCCG GCCGTCTTCCTTCTCGACATGTCGTCCCGTCATCCACAAACATCAGAAGG AGATCGAAAAAATAAACGAGCTAGAAGACAAGAAAGACGACAAAGAGAAA AGAGGAACAAGAAAAGAAAATGAAGAGGAAGAGGAGGAGGAAGGGGAGGA GGAGGAGGAAGAGGAGAAGGAGAAGGAGGAGGAGGAGGCGTTGGCGTCCC TGAGGGCAATTTTCCCCTCCCTTCCCCCAGACGTCTTGAAGTCGATTCTC GCCCAGCATTCAGGCAATGCCGACGCGGCAGCTTATGACCTGGTCGGTGG CTCTCCTCCCTCCTCCTCTTTCTCCCCCTCCTCTTCCTCCTTCTCTTCCG ACACCAGCTACCACTGTACTGCAGACCTGCGGCAAGGCCCCAAAGGCGGG AGTCAAAAGGCGCGATCCGGCCGACGCGTGCTCTGGGACGGCAGCACCAC GAACATGCTCCCCTCTACCTCCCTTCCTCCCTCCCTGCCCTCCTCCAACT CGCCCTGGGCGCCCGCCTCCTCGTCTCCCGCCCTCCTTCCTCCTCTCTCA CTCCCTTCTTGTCCCATTGCCAGCCACTCTGCTGCCTCCTTTCCCTCCCT CCCTCCCCTCTCCTACCCGCGTTCCTCGTCCTCGTCCTCGCCTTCTCTCT CCTTACCTCGCGCACCAACCGCGAGAGGAAGGCGGCTCGGAAGAGGGAGG GAGGAAAGGAGGGAGGGAGGGAGGGAGGGTGAGGTGGGCGAGCAGCGGTT GCGGGCGCAGGGGCTTGCTTGGTTGGAGGAGGTTTACGGACCGGCCAAAG GCGGATTTGACAGGGCATTGATCAGATCGTTGCTGCTGGAGGTCCACAAC GGCGACACGGCTGCGACTGAAGCCTCCCTCCACGAACTGGATCCGAGCCG CTCGTACCAATGCCGGCGAGGCTGGGAGGCAAAGAGGACAGAGGCCTCGC TCCTGACGACAATCATGTTGCCACTTCGTTCCTTTCCCTCTTCTCCCGGA CCTGCGTCCCCCCCTCCTCCTCCCCGCCCGTGCTCGCCCCTCTCTGCCTC ATACCCGCGGACAGGGGGGGGCAGGAGCAAGGGAGGGAGAGAGATGGCGA TGGCCTATCGGCAAGCAGCAGCGAGGGAACAGGAGGCCATGATGGCCGAT TTCAGAAGGGCGGCGACTGCGTACCAGAGCAAAACGTCCTCAGCTGCACT GACGGCGGCCTCGGGCTACGAGCACCGCAAACGCATGCAAGAATATCACG CCAGGGCTGCCTGCGCCCTCCTGCACGAGGTGTGCCCTGCCGTGGAGGTC GGGATGGAGGAGGAGGAGGAGGAAGGAGGCAGGAGGGGCGGTGGAAGGGT GGTGGCCACGAGAGTGAATGCACGCCTCCTTTCTGATCCCTCCTGTCTGA CCATTGACCTGCACAGCTTCCGGGTCCCTGAGGCTCTTTCCCTCCTCCAC TCTCTCCTTGCCCTCCGCCCTCCCTCCTTCCCTCCCTCCCTCCGGACGTT GCGGCTCATCACGGGCAAGGGCACGCATTCTCGGGGGGGCAAGTCCAGGC TTGGGCCCGCGGTGCTTGCAGCGCTACAGCGGCAGGAAGGGGGAGAGGAA GGGCGGGATGGAGGGAGGAAGATTACCAGCGTCTCGATGGACTCGCCGGG GGGGGCGGTGGTGGTGCACTGGAGCAGCCGATGACTGCCCACCAAGTGAG AAAAATGGAAGAGTGCGAGAAACAGCGGCGGAAAGCCGCGCCCAAAAAGT ATGTGATATGCTGTGTACAGAATACATGACAAGACGTCACCCCAGCCGAA AAGCATAAATGACCCTACAATGGAGGAGAGAGAACATGGGAATGAAGCAG CGGACCAGCGAGTCCTTCACAATTCGGA back to topprotein sequence of NO06G04500.3 >NO06G04500.3-protein ID=NO06G04500.3-protein|Name=NO06G04500.3|organism=Nannochloropsis oceanica|type=polypeptide|length=604bp MLQQQDEVEESGDDDNEGLVGGGGSRGEGGGGRGGGEEEEKLRPSSFSTC RPVIHKHQKEIEKINELEDKKDDKEKRGTRKENEEEEEEEGEEEEEEEKE KEEEEALASLRAIFPSLPPDVLKSILAQHSGNADAAAYDLVGGSPPSSSF SPSSSSFSSDTSYHCTADLRQGPKGGSQKARSGRRVLWDGSTTNMLPSTS LPPSLPSSNSPWAPASSSPALLPPLSLPSCPIASHSAASFPSLPPLSYPR SSSSSSPSLSLPRAPTARGRRLGRGREERREGGREGEVGEQRLRAQGLAW LEEVYGPAKGGFDRALIRSLLLEVHNGDTAATEASLHELDPSRSYQCRRG WEAKRTEASLLTTIMLPLRSFPSSPGPASPPPPPRPCSPLSASYPRTGGG RSKGGREMAMAYRQAAAREQEAMMADFRRAATAYQSKTSSAALTAASGYE HRKRMQEYHARAACALLHEVCPAVEVGMEEEEEEGGRRGGGRVVATRVNA RLLSDPSCLTIDLHSFRVPEALSLLHSLLALRPPSFPPSLRTLRLITGKG THSRGGKSRLGPAVLAALQRQEGGEEGRDGGRKITSVSMDSPGGAVVVHW SSR* back to topmRNA from alignment at chr6:1268345..1272609- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO06G04500.3 ID=NO06G04500.3|Name=NO06G04500.3|organism=Nannochloropsis oceanica|type=mRNA|length=4265bp|location=Sequence derived from alignment at chr6:1268345..1272609- (Nannochloropsis oceanica) AGGCGCCGGAAACTAGGCATCAGTCGGACCTGCATCCTTGACCTTATAGC
GTCTTCCCTCTTGTGGCGGCCACACGTTTCCCAGAACTAAAAGATGGCCA
GAAAGAAGAAACATCACCACCACCACCAGGACAAGGAGTATAGCGAGCAG
GATATTGACGCCTTACATGAAATGTTAGATGGAAAAGTGCCGTGGGGCAC
GGTAAGGGCGGTTTTATCACGCGAGGATGGAGACGTGGCCAGGTAGGAAG
GGAGGGTGGATGGGACATTAGGGACAGATAGAAGATGGGCACGCAAAAAT
CGCATCTTGAAAGAACCGATGAAGCAAATCTTAATTTACTTGATGGAAAA
GTATAGATTGTACACGTAAAGCCGCCCTGTACCGAAGGGTAAGAGGGAGG
GAAGGCGGAAGCAGGGATGAATTGATGTGAGAAATTGCATGCTTATCACT
TACTCTTTTCAATGTATGCAGAGCTCTGGGCATATTGCTCCTTATAACAG
ATGAAGGTAGCAGCGCTGTGGGATGCGACTCCGGCGCTTCGGCTGCCGGT
GCCGCCGCCGCTGCAGCTGCTGCTGCGGAGGTGGAAAAGGTGGAAGGAGA
GGTGGGGAAGGAGGGAGGGAAGGAGAGCAGCAAAGAGGTTCGGGACGAGG
AGCAGGAGCAGGAAAACGACGACAGTGCTGCCAATTTATCCTCAGCGGCG
TCAAAAATTACCAACCCTTCTTTCATAACTCCTCCTCATCTTCCTTCTTC
TCCCTTCCCTCCCTCAGTCGCCCGCCCCTCACCGGGAGTGGCGGGACGGA
GGGAAGGCCTGAGCTTAAAGGCGTGGGATGAACTGTGCCGGATCTTCGAA
GGCGTTCTGTCGCTAGATGCTCTGCACAGAGTGTACGAGGAGGCAGAGGG
GCTGGAGGGAGCAGTCGAGGTAGGAAGGGAGAGAGGAGAGAGGAGGGGAG
GAGGGAAAGGAGGGTGGAAGCTGTGGGCGATGGTTTGATCTCTCCGCATA
CGACTGACAGGAGGTGGAACGGATGCTGCAGCAGCAAGACGAGGTCGAGG
AATCAGGGGATGACGACAACGAGGGCCTGGTGGGAGGAGGGGGGAGCAGA
GGAGAAGGGGGGGGGGGAAGAGGAGGAGGGGAAGAGGAGGAAAAGCTCCG
GCCGTCTTCCTTCTCGACATGTCGTCCCGTCATCCACAAACATCAGAAGG
AGATCGAAAAAATAAACGAGCTAGAAGACAAGAAAGACGACAAAGAGAAA
AGAGGAACAAGAAAAGAAAATGAAGAGGAAGAGGAGGAGGAAGGGGAGGA
GGAGGAGGAAGAGGAGAAGGAGAAGGAGGAGGAGGAGGCGTTGGCGTCCC
TGAGGGCAATTTTCCCCTCCCTTCCCCCAGACGTCTTGAAGTCGATTCTC
GCCCAGCATTCAGGTACTCCCGTCCCTCCCTCCCTCCCTCCCTCCCTCCC
TCCCTCTTTCCTTCCTTCCCCCGCTCCTTCCCTGCATGTAAATTGTCCAT
ATTCTCGTTCTTTTCTTGGCTCTCTGTCTTCCCATCTTCCTCCATCTCCC
TCTCACATTTTCCTTCCTCCTTCTTCCCCTCCGTCTCTGCCTTCCTTTCA
AGGCAATGCCGACGCGGCAGCTTATGACCTGGTCGGTGGCTCTCCTCCCT
CCTCCTCTTTCTCCCCCTCCTCTTCCTCCTTCTCTTCCGACACCAGCTAC
CACTGTACTGCAGGTAGGTGGGTGGGTGGGGAGGGAGGGCGCGAGGGAGA
GTGGGAGGGGGGGAAGATGGAAGCATGATGATGCCACTCGTCTCTTGCCA
ATTTCTCATGTGATTGCTGTTGCTCCCTTCTCCTCCTTCTTTCTCTCTTT
ATCTTCCACTCCCATCTTCTTCCTCCCTCTAGACCTGCGGCAAGGCCCCA
AAGGCGGGAGTCAAAAGGCGCGATCCGGCCGACGCGTGCTCTGGGACGGC
AGCACCACGAACATGCTCCCCTCTACCTCCCTTCCTCCCTCCCTGCCCTC
CTCCAACTCGCCCTGGGCGCCCGCCTCCTCGTCTCCCGCCCTCCTTCCTC
CTCTCTCACTCCCTTCTTGTCCCATTGCCAGCCACTCTGCTGCCTCCTTT
CCCTCCCTCCCTCCCCTCTCCTACCCGCGTTCCTCGTCCTCGTCCTCGCC
TTCTCTCTCCTTACCTCGCGCACCAACCGCGAGAGGAAGGCGGCTCGGAA
GAGGGAGGGAGGAAAGGAGGGAGGGAGGGAGGGAGGGTGAGGTGGGCGAG
CAGCGGTTGCGGGCGCAGGGGCTTGCTTGGTTGGAGGAGGTTTACGGACC
GGCCAAAGGCGGATTTGACAGGGCATTGATCAGATCGTTGCTGCTGGAGG
TGAAATGGGAGGGAGAGAGGGAGGGAGGGAGAGGCGGAAGAGGTGGGAGG
GAAGACCCGCGCTGTCAAGCTAGATAGGAGAAGGAGGAGGGAGTATCATG
TGGCCCTCCCTTCCTCCCTCCCCTCCTTTCCATTCCCTCTTTCCTTCCCT
CCCTCCCTCGATGCGCAACGACGGCGACACAGCAGCAGCCGGGTCGGCCT
CTCTGGACGAACTGGATCCCGCCCCTGTCGAGCATACCCCTTCCACACTC
CCATCCTCCCTCCCTCCCTCTCTCCCTCCCTCCTCTTCAGGTCCACAACG
GCGACACGGCTGCGACTGAAGCCTCCCTCCACGAACTGGATCCGAGCCGC
TCGTACCAATGCCGGCGAGGCTGGGAGGCAAAGAGGACAGAGGTGAGGAG
GAGGATGGGGGGGGAAGGGAGGGCGGGCGAGCAGAGGGCTTCAAGGAAGA
GGGAGAGTGGAGAAGGAGGGAGGGAGAGTGGGAGAGCAAAGTAGAGCGTA
GAGGGCTTATATCGAGCCTTTTCTGCCTGCATTAAACTACAGGCCTCGCT
CCTGACGACAATCATGTTGCCACTTCGTTCCTTTCCCTCTTCTCCCGGAC
CTGCGTCCCCCCCTCCTCCTCCCCGCCCGTGCTCGCCCCTCTCTGCCTCA
TACCCGCGGACAGGGGGGGGCAGGAGCAAGGGAGGGAGAGAGATGGCGAT
GGCCTATCGGCAAGCAGCAGCGAGGGAACAGGAGGCCATGATGGCCGATT
TCAGAAGGGCGGCGACTGCGTACCAGAGCAAAACGTCCTCAGCTGGTAGG
GAGGGAGTGAGAGAGTGAGGGAATGAGGGAGGGAGGGAGGAAAGAATGAA
AAAGAATACACTGTCATTTAATGTTTGTCCATTCACAGCACTGACGGCGG
CCTCGGGCTACGAGCACCGCAAACGCATGCAAGAATATCACGCCAGGTGC
AGAGGGAGGGAAAGAGGGTGGGAGGGAGATAGGGACGCGAACACTTTACC
TGCTGCCCACAAACAATGCGTGTGGATGTTAATCCTTTTCTCTTCCTTTC
TCCTCCTCCAGGGCTGCCTGCGCCCTCCTGCACGAGGTGTGCCCTGCCGT
GGAGGTCGGGATGGAGGAGGAGGAGGAGGAAGGAGGCAGGAGGGGCGGTG
GAAGGGTGGTGGCCACGAGAGTGAATGCACGGTGAGGAGGGAGGGAGGGA
CGGAGGGAGGTGTTTAAGGAGGCCAGAAGAGGAAACAATGTTTCAAAGAG
AAGACAATGGCTGATAGCTGCCTTCCCTTCCTCCACCCTCTCTCCCTCTC
CCCTCTCCTTCTTCCTTCCTCAGCCTCCTTCCTTCCTTCCTCCTAGCGGA
ACTCTAATCACCCCCCTCCTCTACCCCTCCCTCCCTCGCTTCCTCCCCCC
CCTGCCCCCAGCCTCCTTTCTGATCCCTCCTGTCTGACCATTGACCTGCA
CAGCTTCCGGGTCCCTGAGGCTCTTTCCCTCCTCCACTCTCTCCTTGCCC
TCCGCCCTCCCTCCTTCCCTCCCTCCCTCCGGACGTTGCGGCTCATCACG
GGCAAGGGCACGCATTCTCGGGGGGGCAAGTCCAGGCTTGGGCCCGCGGT
GCTTGCAGCGCTACAGCGGCAGGAAGGGGGAGAGGAAGGGCGGGATGGAG
GGAGGAAGATTACCAGCGTCTCGATGGACTCGCCGGGGGGGGCGGTGGTG
GTGCACTGGAGCAGCCGATGACTGCCCACCAAGTGAGAAAAATGGAAGAG
TGCGAGAAACAGCGGCGGAAAGCCGCGCCCAAAAAGTATGTGATATGCTG
TGTACAGAATACATGACAAGACGTCACCCCAGCCGAAAAGCATAAATGAC
CCTACAATGGAGGAGAGAGAACATGGGAATGAAGCAGCGGACCAGCGAGT
CCTTCACAATTCGGA back to topCoding sequence (CDS) from alignment at chr6:1268345..1272609- >NO06G04500.3 ID=NO06G04500.3|Name=NO06G04500.3|organism=Nannochloropsis oceanica|type=CDS|length=1812bp|location=Sequence derived from alignment at chr6:1268345..1272609- (Nannochloropsis oceanica) ATGCTGCAGCAGCAAGACGAGGTCGAGGAATCAGGGGATGACGACAACGA GGGCCTGGTGGGAGGAGGGGGGAGCAGAGGAGAAGGGGGGGGGGGAAGAG GAGGAGGGGAAGAGGAGGAAAAGCTCCGGCCGTCTTCCTTCTCGACATGT CGTCCCGTCATCCACAAACATCAGAAGGAGATCGAAAAAATAAACGAGCT AGAAGACAAGAAAGACGACAAAGAGAAAAGAGGAACAAGAAAAGAAAATG AAGAGGAAGAGGAGGAGGAAGGGGAGGAGGAGGAGGAAGAGGAGAAGGAG AAGGAGGAGGAGGAGGCGTTGGCGTCCCTGAGGGCAATTTTCCCCTCCCT TCCCCCAGACGTCTTGAAGTCGATTCTCGCCCAGCATTCAGGCAATGCCG ACGCGGCAGCTTATGACCTGGTCGGTGGCTCTCCTCCCTCCTCCTCTTTC TCCCCCTCCTCTTCCTCCTTCTCTTCCGACACCAGCTACCACTGTACTGC AGACCTGCGGCAAGGCCCCAAAGGCGGGAGTCAAAAGGCGCGATCCGGCC GACGCGTGCTCTGGGACGGCAGCACCACGAACATGCTCCCCTCTACCTCC CTTCCTCCCTCCCTGCCCTCCTCCAACTCGCCCTGGGCGCCCGCCTCCTC GTCTCCCGCCCTCCTTCCTCCTCTCTCACTCCCTTCTTGTCCCATTGCCA GCCACTCTGCTGCCTCCTTTCCCTCCCTCCCTCCCCTCTCCTACCCGCGT TCCTCGTCCTCGTCCTCGCCTTCTCTCTCCTTACCTCGCGCACCAACCGC GAGAGGAAGGCGGCTCGGAAGAGGGAGGGAGGAAAGGAGGGAGGGAGGGA GGGAGGGTGAGGTGGGCGAGCAGCGGTTGCGGGCGCAGGGGCTTGCTTGG TTGGAGGAGGTTTACGGACCGGCCAAAGGCGGATTTGACAGGGCATTGAT CAGATCGTTGCTGCTGGAGGTCCACAACGGCGACACGGCTGCGACTGAAG CCTCCCTCCACGAACTGGATCCGAGCCGCTCGTACCAATGCCGGCGAGGC TGGGAGGCAAAGAGGACAGAGGCCTCGCTCCTGACGACAATCATGTTGCC ACTTCGTTCCTTTCCCTCTTCTCCCGGACCTGCGTCCCCCCCTCCTCCTC CCCGCCCGTGCTCGCCCCTCTCTGCCTCATACCCGCGGACAGGGGGGGGC AGGAGCAAGGGAGGGAGAGAGATGGCGATGGCCTATCGGCAAGCAGCAGC GAGGGAACAGGAGGCCATGATGGCCGATTTCAGAAGGGCGGCGACTGCGT ACCAGAGCAAAACGTCCTCAGCTGCACTGACGGCGGCCTCGGGCTACGAG CACCGCAAACGCATGCAAGAATATCACGCCAGGGCTGCCTGCGCCCTCCT GCACGAGGTGTGCCCTGCCGTGGAGGTCGGGATGGAGGAGGAGGAGGAGG AAGGAGGCAGGAGGGGCGGTGGAAGGGTGGTGGCCACGAGAGTGAATGCA CGCCTCCTTTCTGATCCCTCCTGTCTGACCATTGACCTGCACAGCTTCCG GGTCCCTGAGGCTCTTTCCCTCCTCCACTCTCTCCTTGCCCTCCGCCCTC CCTCCTTCCCTCCCTCCCTCCGGACGTTGCGGCTCATCACGGGCAAGGGC ACGCATTCTCGGGGGGGCAAGTCCAGGCTTGGGCCCGCGGTGCTTGCAGC GCTACAGCGGCAGGAAGGGGGAGAGGAAGGGCGGGATGGAGGGAGGAAGA TTACCAGCGTCTCGATGGACTCGCCGGGGGGGGCGGTGGTGGTGCACTGG AGCAGCCGATGA back to top
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