|
|
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| chr6 | genome | chr6:1122613..1125859 + |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO06G04020.1 ID=NO06G04020.1|Name=NO06G04020.1|organism=Nannochloropsis oceanica|type=mRNA|length=3027bp
TCGACACAATTCTTTTTTCCATCACGCACTTCCCTTTTTCTTCTTTTCCC
AAGTATTATTTCTTTCATTTTGTTCTTTGCTTTAGTTGATTACAATTTAG
GGCCCATCCAGGATTAAGGGATCGAAGACGTGTACAATAGTGTCAGCAGC
GACTGAACGAGCTCGAGGCATCGCCATCGTGTGGGCTCTACCTTACTCCT
CATCCCCTCCCTCGCCAGTCCCCTATTACCTCCATTACCAAGTCGTTCAA
CGCCCCCGCAACAGGGTCACGGACCACCAGCAGCACGGTGCCTTTCGCGC
CATCCAACACCAAGAAAAGCGGACGCATCGACAAGCGAGGAATGCCATGG
GCATCCATCCATTGATGAGAAGGGTCGCTGAGGAGGGAGGGAGAGGAGGA
GGGAGAGGAGGAGGAGGAGGGGGAGGAGAAGGGTGGCAACCCGCTTTTTT
TGGCCAGGCGCTGCGCGTCCTGAGGAGGTAGAATTGTCACACCCACGACG
GCGGCGAGAGAGGGAGGGATGATCCGCATGCGTTTAAGTCCTTCTGTGAG
CGTGAGTGCGGATTGGCTGGGGTCGACCAGGACGATGACGTACTTGCTGG
TGCCCTGTGCGGCGGTGTAAGGAAGGAGGGATGCAGGGAAAGACAAATTG
AGGAAGGCATTTTCAGACCGCTGGAGGCATCGCCAAGCCGAAAGAGGCGC
GTAATCGTGCCGCTTCAAAGCCTTGCCTATCAACACCTCCGGCTGCTGTT
GCTCTTGCTGCTGCTGTTGTTGATGCTGCTGCTCCCCTCCTGGCACTGAT
GACGAAGGCGAAGAAGAAGAATAAGGAAGTGGAGAGGACAACGGCACAAC
CACACCCGCTGCCGCCGCTGCCGCTACCGCTGCTGGGAAATTTCCTCCTC
CCATCCTTTGCGCTTGAGCTTTCGCAGCTTCCTCCTCCTTGGCGTAGACA
TTCACCACACTCCCCCCCGAGCCACGCTCCGCCTTGAATTCCAACATGGC
ACTCAATTCCTCCATCGCAGCTGCCTCCCCTCCTTCTCTACCCTTGCTTC
CTTCCGCGGCGTTCCGCCAATCCGGGTTGGGTTTTTTGGGATTATACCAC
TCAGTTTCCATTATGTCCTCGCGTCTCGAGGCCCGCAAGCGACGAATGTG
CTGAATGCGTTGCGATAACAACACTTGGCTTTGCTTTTCCCGGAGCTCTT
TTTCGGCAACGCCACGCTCGCGTTCCTCCCCAGACGGCTTGGTGCGCATT
TGGAGGACGCCGTGCTGGCGGCGGTCGCGGGGAGGAGAGGAGGAAAGCGG
CGAAGAATGAAGCGGCTTTAGGTGGGAAAGGGAGGGGATGAAGGAAAAGG
CACAGGGTGTGCTGGCCAAGAGAAGGTTGAGGAGGACAAGCAGGGGAACG
AGGCAGGGATGACGGACGTATCTTATAGTTGCCGCCATTGCCAGCACCGG
TGGCAAGCTGTGGTGTGATGTGCATGGGAGCGCGTGAGGGGGAGCGGGAA
GGGGTGGGTGCGAGCGGCGCCGGGAGGTTGAACGAGGAATCGCAAATGCG
CCTGAAAGCCACAGGCAAACTCGCACAGCTCACAGCACACCTACCCTACG
TATACGATATGGTCAAGCATCGTCATCGTGCCTGCGTCAAGGCACCTCTC
TTTCTCAATCGCTCACGGCGACCGTGACAGATCGATCCAATCACCCTCCC
AAAAGGACTTCAATACCCCCACCCTCCACAAATATTGACAGGCATGGCTC
CCAGCGCGTCACGACCAAGACAACCGGCTCTGGTGTCACTCTCAGTCATG
TTCCTGGCCCTCTCCTCCGGCCCCATAAGAGTGAAGGCCTCCCGCAAGCC
CAGCAGCGGCAGTAAAGAGGACAGAAAAAAAGCACGAGCCGCGCCCACCC
CCCAACAGAAGGAGCAGGCACCACCACCATCAGCGGAAAAAATCAAATTC
AAGCTCGCAGACTTTCTTGATCCATACGGGGAATGGGGAGAAGACGAGAA
AGGAAGGGAGGGCGGTGGTCAGTATGGTCCGGGGACCGCGGAAGGGACGT
TCGTGATGATGGAGAGTGGGAAGATGATGGAGGACTGGGAGGAGCTGATG
CGGATGGAGCCCCCCAAGCCGTTGCGAGAGTACATGGACTGCTTGGCCCT
TTCTCCGTTTGGCTTGCCACCACCTTCCACCGCTGACTATTTGGAAAGAG
AAGAAGAAAAAGAAGAAGAACGAGGAGGAGGAGGAGGAGGAGGAGGAGGA
GGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGTGAGCC
TGTCTACCTTGTGGTGGACGATGCCCCCACTGGCCGTGTTACACTCGACG
TGGATTGCCTTCTTCATGCTATCCCTGAGCTCCCTGCCCCCGCTTCCTCC
TCCTTCTCTTCCTTCCCTTCCTTCTCTGCCTCCCAACCCTTCCCTCGCAC
GGCCACTGAGCGTTTCCCCTTCCTCCTCGACCCCAGCCTATACACCTGTA
CTCCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCTTCC
TTCTCCTCCGCCTCCAGCCCCACCACCATCACCTGCTTCGGGCGCGCCGC
CCCCGTCCTCCTCGAAGCCGCCTTCACCCGTTTGGATATTCACCGCTCCT
CCTCCTCCTCGCGCTCCTCTGGCCCTTCCCGATGGCAACACCACCAAGCC
AGATATGACTGGGAGGTAGGAGGAGAAGAGGATTACGACAGTGCGGTTCA
TACCTACAGCAATGCGCAGTTGGACATGCAGGATGATTTTGCCGACCTCT
GCGCCTTTTACCCGTCAATGAAGGATGCGGAGACGTGCCTCGATCTTCTG
AGTGGATGGGCCGAGTTTTCTCAAGACCATCCTCCTCCTCCTCCTCCTTC
TTCCTCTTCTCTATCGCAGCAGCAACGGATGAAGGGTGGGGAAGGGAATA
AGAAGAAGAAGGAGAAGGACAAGAAGAAGAGGAGGGATCTAGATTGGATG
GCAGAGGAGGGGGGGAGGAGGAGGTAA back to topprotein sequence of NO06G04020.1 >NO06G04020.1-protein ID=NO06G04020.1-protein|Name=NO06G04020.1|organism=Nannochloropsis oceanica|type=polypeptide|length=428bp
MAPSASRPRQPALVSLSVMFLALSSGPIRVKASRKPSSGSKEDRKKARAA
PTPQQKEQAPPPSAEKIKFKLADFLDPYGEWGEDEKGREGGGQYGPGTAE
GTFVMMESGKMMEDWEELMRMEPPKPLREYMDCLALSPFGLPPPSTADYL
EREEEKEEERGGGGGGGGGGGGGGGGGGGGGGGGEPVYLVVDDAPTGRVT
LDVDCLLHAIPELPAPASSSFSSFPSFSASQPFPRTATERFPFLLDPSLY
TCTPSSSSSSSSSSSSSSSFSSASSPTTITCFGRAAPVLLEAAFTRLDIH
RSSSSSRSSGPSRWQHHQARYDWEVGGEEDYDSAVHTYSNAQLDMQDDFA
DLCAFYPSMKDAETCLDLLSGWAEFSQDHPPPPPPSSSSLSQQQRMKGGE
GNKKKKEKDKKKRRDLDWMAEEGGRRR* back to topmRNA from alignment at chr6:1122613..1125859+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO06G04020.1 ID=NO06G04020.1|Name=NO06G04020.1|organism=Nannochloropsis oceanica|type=mRNA|length=3247bp|location=Sequence derived from alignment at chr6:1122613..1125859+ (Nannochloropsis oceanica)
TCGACACAATTCTTTTTTCCATCACGCACTTCCCTTTTTCTTCTTTTCCC
AAGTATTATTTCTTTCATTTTGTTCTTTGCTTTAGTTGATTACAATTTAG
GGCCCATCCAGGATTAAGGGATCGAAGACGTGTACAATAGTGTCAGCAGC
GACTGAACGAGCTCGAGGCATCGCCATCGTGTGGGCTCTACCTTACTCCT
CATCCCCTCCCTCGCCAGTCCCCTATTACCTCCATTACCAAGTCGTTCAA
CGCCCCCGCAACAGGGTCACGGACCACCAGCAGCACGGTGCCTTTCGCGC
CATCCAACACCAAGAAAAGCGGACGCATCGACAAGCGAGGAATGCCATGG
GCATCCATCCATTGATGAGAAGGGTCGCTGAGGAGGGAGGGAGAGGAGGA
GGGAGAGGAGGAGGAGGAGGGGGAGGAGAAGGGTGGCAACCCGCTTTTTT
TGGCCAGGCGCTGCGCGTCCTGAGGAGGTAGAATTGTCACACCCACGACG
GCGGCGAGAGAGGGAGGGATGATCCGCATGCGTTTAAGTCCTTCTGTGAG
CGTGAGTGCGGATTGGCTGGGGTCGACCAGGACGATGACGTACTTGCTGG
TGCCCTGTGCGGCGGTGTAAGGAAGGAGGGATGCAGGGAAAGACAAATTG
AGGAAGGGTAAGATGCGGGCGGAGGAGACATGAAGAGTATCTATTCAAAG
ATGTATGTATGATCTACATTCGTGTGCTACAATATACCATCACCATTCAA
AGCGCGCTAGCATCTCATGACCTCCTTCTCGACACTCTACCCCCCTCCCT
CCCTGCATCCCTCCCTTGCCACTCCATATATCTCACCCGCACACTGTTGT
ACGTGACTTGCACTTGTCCTTCTCTAGCATTTTCAGACCGCTGGAGGCAT
CGCCAAGCCGAAAGAGGCGCGTAATCGTGCCGCTTCAAAGCCTTGCCTAT
CAACACCTCCGGCTGCTGTTGCTCTTGCTGCTGCTGTTGTTGATGCTGCT
GCTCCCCTCCTGGCACTGATGACGAAGGCGAAGAAGAAGAATAAGGAAGT
GGAGAGGACAACGGCACAACCACACCCGCTGCCGCCGCTGCCGCTACCGC
TGCTGGGAAATTTCCTCCTCCCATCCTTTGCGCTTGAGCTTTCGCAGCTT
CCTCCTCCTTGGCGTAGACATTCACCACACTCCCCCCCGAGCCACGCTCC
GCCTTGAATTCCAACATGGCACTCAATTCCTCCATCGCAGCTGCCTCCCC
TCCTTCTCTACCCTTGCTTCCTTCCGCGGCGTTCCGCCAATCCGGGTTGG
GTTTTTTGGGATTATACCACTCAGTTTCCATTATGTCCTCGCGTCTCGAG
GCCCGCAAGCGACGAATGTGCTGAATGCGTTGCGATAACAACACTTGGCT
TTGCTTTTCCCGGAGCTCTTTTTCGGCAACGCCACGCTCGCGTTCCTCCC
CAGACGGCTTGGTGCGCATTTGGAGGACGCCGTGCTGGCGGCGGTCGCGG
GGAGGAGAGGAGGAAAGCGGCGAAGAATGAAGCGGCTTTAGGTGGGAAAG
GGAGGGGATGAAGGAAAAGGCACAGGGTGTGCTGGCCAAGAGAAGGTTGA
GGAGGACAAGCAGGGGAACGAGGCAGGGATGACGGACGTATCTTATAGTT
GCCGCCATTGCCAGCACCGGTGGCAAGCTGTGGTGTGATGTGCATGGGAG
CGCGTGAGGGGGAGCGGGAAGGGGTGGGTGCGAGCGGCGCCGGGAGGTTG
AACGAGGAATCGCAAATGCGCCTGAAAGCCACAGGCAAACTCGCACAGCT
CACAGCACACCTACCCTACGTATACGATATGGTCAAGCATCGTCATCGTG
CCTGCGTCAAGGCACCTCTCTTTCTCAATCGCTCACGGCGACCGTGACAG
ATCGATCCAATCACCCTCCCAAAAGGACTTCAATACCCCCACCCTCCACA
AATATTGACAGGCATGGCTCCCAGCGCGTCACGACCAAGACAACCGGCTC
TGGTGTCACTCTCAGTCATGTTCCTGGCCCTCTCCTCCGGCCCCATAAGA
GTGAAGGCCTCCCGCAAGCCCAGCAGCGGCAGTAAAGAGGACAGAAAAAA
AGCACGAGCCGCGCCCACCCCCCAACAGAAGGAGCAGGCACCACCACCAT
CAGCGGAAAAAATCAAATTCAAGCTCGCAGACTTTCTTGATCCATACGGG
GAATGGGGAGAAGACGAGAAAGGAAGGGAGGGCGGTGGTCAGTATGGTCC
GGGGACCGCGGAAGGGACGTTCGTGATGATGGAGAGTGGGAAGATGATGG
AGGACTGGGAGGAGCTGATGCGGATGGAGCCCCCCAAGCCGTTGCGAGAG
TACATGGACTGCTTGGCCCTTTCTCCGTTTGGCTTGCCACCACCTTCCAC
CGCTGACTATTTGGAAAGAGAAGAAGAAAAAGAAGAAGAACGAGGAGGAG
GAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGA
GGAGGAGGAGGAGGTGAGCCTGTCTACCTTGTGGTGGACGATGCCCCCAC
TGGCCGTGTTACACTCGACGTGGATTGCCTTCTTCATGCTATCCCTGAGC
TCCCTGCCCCCGCTTCCTCCTCCTTCTCTTCCTTCCCTTCCTTCTCTGCC
TCCCAACCCTTCCCTCGCACGGCCACTGAGCGTTTCCCCTTCCTCCTCGA
CCCCAGCCTATACACCTGTACTCCCTCCTCCTCCTCCTCCTCCTCCTCCT
CCTCCTCCTCCTCCTCTTCCTTCTCCTCCGCCTCCAGCCCCACCACCATC
ACCTGCTTCGGGCGCGCCGCCCCCGTCCTCCTCGAAGCCGCCTTCACCCG
TTTGGATATTCACCGCTCCTCCTCCTCCTCGCGCTCCTCTGGCCCTTCCC
GATGGCAACACCACCAAGCCAGATATGACTGGGAGGTAGGAGGAGAAGAG
GATTACGACAGTGCGGTTCATACCTACAGCAATGCGCAGTTGGACATGCA
GGATGATTTTGCCGACCTCTGCGCCTTTTACCCGTCAATGAAGGATGCGG
AGACGTGCCTCGATCTTCTGAGTGGATGGGCCGAGTTTTCTCAAGACCAT
CCTCCTCCTCCTCCTCCTTCTTCCTCTTCTCTATCGCAGCAGCAACGGAT
GAAGGGTGGGGAAGGGAATAAGAAGAAGAAGGAGAAGGACAAGAAGAAGA
GGAGGGATCTAGATTGGATGGCAGAGGAGGGGGGGAGGAGGAGGTAA back to topCoding sequence (CDS) from alignment at chr6:1122613..1125859+ >NO06G04020.1 ID=NO06G04020.1|Name=NO06G04020.1|organism=Nannochloropsis oceanica|type=CDS|length=1284bp|location=Sequence derived from alignment at chr6:1122613..1125859+ (Nannochloropsis oceanica)
ATGGCTCCCAGCGCGTCACGACCAAGACAACCGGCTCTGGTGTCACTCTC
AGTCATGTTCCTGGCCCTCTCCTCCGGCCCCATAAGAGTGAAGGCCTCCC
GCAAGCCCAGCAGCGGCAGTAAAGAGGACAGAAAAAAAGCACGAGCCGCG
CCCACCCCCCAACAGAAGGAGCAGGCACCACCACCATCAGCGGAAAAAAT
CAAATTCAAGCTCGCAGACTTTCTTGATCCATACGGGGAATGGGGAGAAG
ACGAGAAAGGAAGGGAGGGCGGTGGTCAGTATGGTCCGGGGACCGCGGAA
GGGACGTTCGTGATGATGGAGAGTGGGAAGATGATGGAGGACTGGGAGGA
GCTGATGCGGATGGAGCCCCCCAAGCCGTTGCGAGAGTACATGGACTGCT
TGGCCCTTTCTCCGTTTGGCTTGCCACCACCTTCCACCGCTGACTATTTG
GAAAGAGAAGAAGAAAAAGAAGAAGAACGAGGAGGAGGAGGAGGAGGAGG
AGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAG
GTGAGCCTGTCTACCTTGTGGTGGACGATGCCCCCACTGGCCGTGTTACA
CTCGACGTGGATTGCCTTCTTCATGCTATCCCTGAGCTCCCTGCCCCCGC
TTCCTCCTCCTTCTCTTCCTTCCCTTCCTTCTCTGCCTCCCAACCCTTCC
CTCGCACGGCCACTGAGCGTTTCCCCTTCCTCCTCGACCCCAGCCTATAC
ACCTGTACTCCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTC
CTCTTCCTTCTCCTCCGCCTCCAGCCCCACCACCATCACCTGCTTCGGGC
GCGCCGCCCCCGTCCTCCTCGAAGCCGCCTTCACCCGTTTGGATATTCAC
CGCTCCTCCTCCTCCTCGCGCTCCTCTGGCCCTTCCCGATGGCAACACCA
CCAAGCCAGATATGACTGGGAGGTAGGAGGAGAAGAGGATTACGACAGTG
CGGTTCATACCTACAGCAATGCGCAGTTGGACATGCAGGATGATTTTGCC
GACCTCTGCGCCTTTTACCCGTCAATGAAGGATGCGGAGACGTGCCTCGA
TCTTCTGAGTGGATGGGCCGAGTTTTCTCAAGACCATCCTCCTCCTCCTC
CTCCTTCTTCCTCTTCTCTATCGCAGCAGCAACGGATGAAGGGTGGGGAA
GGGAATAAGAAGAAGAAGGAGAAGGACAAGAAGAAGAGGAGGGATCTAGA
TTGGATGGCAGAGGAGGGGGGGAGGAGGAGGTAA back to top
|