NO06G03420.1, NO06G03420.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO06G03420.1
Unique NameNO06G03420.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3776
Alignment locationchr6:945073..949166 -

Link to JBrowse

Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr6genomechr6:945073..949166 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
[Close]
BLAST of NO06G03420.1 vs.
Match: EWM26336.1 (shikimate transporter 3 [Nannochloropsis gaditana])

HSP 1 Score: 703.0 bits (1813), Expect = 9.600e-199
Identity = 390/611 (63.83%), Postives = 465/611 (76.10%), Query Frame = 0 
Query:  101 QQEAKKRKKSTAAHAIANAFFSSTLTWLLWSLYCVLAGSLFVDIFYPREWRASEHRLLRILNYFTRPIGGIFFGHLGDTWGRTKTLTVCLCVMGLASACIGLLPTEDTWGWGSWYLLLSLHALQGLAVGGEWGGCLLLVYEFCRHDRNKGLVSALPQAGRALGFMLSSYITASLYDDTPSPSDADNGGGILKLPEKDLRWRLAHALAIGLLLLALHLRLRIPESPEFRLLQKHQRLRSWPLGEALKTQTANILWVLGALWLDGVVQVMVVGWGLPTLLAERGISIDALLFSLSIAAFVEALFTVVGGWLGDRVGRRKLFFVASMSIAVGTVFYFHALFQLSSPTRVVPMYVANILYLGVAYGMLQGSFPALLVEVFPSNVRYSGVSLVYNISRVYSSGAWPYVSQALLAAGKGSKFSFLALENGVNPVGLVLFVSLVAVVAAVSVLMIQIYSSGGRGGVPLPFNVLSRRSKVREHVGGGIQQQL-QREQMEKGLGVAGEEG-----QEEENAQQGGVGMREQERGMEFVGQGSWRRRGRRREERSDAGGGGLDVKTEEQKYY-LEGEEEEEEDYDDDIDDSYYEDGEEEEDDQDDSASSVFSDFDEEREQD 705
            Q   K+R K+TAA AIANAF +STLTWLLWSLY VLAGSLFVDIFYP+ W  SEHRLLR L+Y +RP+G + FGHLGDTWGRTKTLTVCL VMGLAS C+ LLPT   WGW SWYLLL LHALQGLAVGG+WGGCLLL YEFCRHDR+KGLVS+LPQAGRALG+ML++ I+ASL  + P  + + +GG  L L + DLRWR AH  A GLLLLALHLRLRIPE  EF  L+KH+RLR++PL  AL+ Q  NI+W LGALW+DGV QVMVVGWGLP LL   GIS++ LL SL+IA FV+A+F VVGGWLGDR+GRRKLFFVASMS+A+GTVFYF+ALF+LSSP+R  P+Y+ANILYLG+AYG LQG FPALLVE+FP NVR+SGV+++Y +SR+YSS AWPY SQALL A +G++F FLALENG N  GL +FV+ VA V+A+SVLMIQIYSSGGRG   LPF ++SRRSKVRE+VGGGIQ QL Q+E++  G    GE G     +E E++++G           E VG  ++  RG RR  R  A   G++ K E      LEG E E  + DD     Y  D EE E+D++DSA SVFSDFDE    D
Sbjct:   23 QHMTKQRSKATAAQAIANAFVASTLTWLLWSLYGVLAGSLFVDIFYPQAWHVSEHRLLRTLSYLSRPLGAVLFGHLGDTWGRTKTLTVCLAVMGLASGCMALLPTHQVWGWASWYLLLVLHALQGLAVGGQWGGCLLLAYEFCRHDRHKGLVSSLPQAGRALGYMLTALISASLDKEKPPTAGSPSGGTTLHLADNDLRWRWAHGFAAGLLLLALHLRLRIPEPREFLYLKKHRRLRAFPLFRALRAQLWNIIWALGALWVDGVTQVMVVGWGLPALLTAHGISMETLLTSLAIAVFVQAVFIVVGGWLGDRLGRRKLFFVASMSMALGTVFYFYALFRLSSPSRAYPIYLANILYLGIAYGTLQGVFPALLVEIFPENVRFSGVAVLYQVSRLYSSVAWPYASQALLRASRGARFKFLALENGENLTGLAIFVASVAGVSAMSVLMIQIYSSGGRGEGVLPFPLVSRRSKVREYVGGGIQHQLQQKEEIMNGSREEGEGGGVRPFEEVEDSEEG-----------EGVGLETYEWRGSRRGRRPPA--DGVEEKLEPDTLSGLEGGEGEMIEEDD-----YSFDEEEYEEDEEDSAGSVFSDFDEPPMHD 615
The following BLAST results are available for this feature:
BLAST of NO06G03420.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1
Match NameE-valueIdentityDescription
EWM26336.19.600e-19963.83shikimate transporter 3 [Nannochloropsis gaditana][more]
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO06G03420NO06G03420Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO06G03420.1NO06G03420.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO06G03420.1.cds1NO06G03420.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO06G03420.1.cds2NO06G03420.1.cds2Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO06G03420.1 ID=NO06G03420.1|Name=NO06G03420.1|organism=Nannochloropsis oceanica|type=mRNA|length=3776bp
ATCTTCTCACATGAACCGGTTCAGCACCCTACCTCTCGCACCGACTGCCT
TGTCCTTTTTTAATGCGTATGTGTTTCTGGACTGTGGACTAAACGGAAGG
CTGCCGATTGGTAGGGTGCCCCGAGACATTCCTTTTCCAGGGCAGCAAAA
CCTCTCATTGCCTTTGTTCCCGGATTTCCTTGCACAGGCCTCAAGCACAG
GCATCGCGCCATTGCGCCATCTGAGGATTTTTTCACTACCCCCCATGCAT
GCCAGCACCCGCCTGCCCCCACTAGAGGCGGCACGGCAAAGCAGCGGCCT
TCAAACGCAACAGCAGGAGGCCAAAAAGAGGAAAAAAAGCACCGCCGCCC
ACGCCATAGCAAACGCCTTCTTCTCCTCCACCCTAACCTGGCTCCTGTGG
TCACTCTACTGCGTGCTAGCAGGCTCCCTTTTCGTTGATATATTTTATCC
ACGTGAATGGCGGGCCTCGGAACATCGCCTCCTACGTATCCTCAACTACT
TTACTCGGCCCATCGGCGGCATCTTCTTCGGACACCTAGGTGACACATGG
GGACGAACCAAAACCCTTACTGTCTGCCTCTGCGTTATGGGGCTCGCCTC
TGCGTGCATTGGTCTTCTCCCCACGGAAGACACATGGGGTTGGGGGTCTT
GGTACCTGCTTCTCTCGCTGCACGCACTTCAGGGCTTGGCCGTGGGCGGG
GAGTGGGGCGGTTGCTTACTCTTAGTTTACGAATTTTGCCGTCACGATCG
GAATAAGGGCCTCGTTTCAGCCCTTCCCCAAGCAGGACGGGCCTTGGGTT
TTATGCTCTCCTCCTACATTACGGCCAGCTTATATGACGACACTCCCTCC
CCTTCCGATGCTGACAATGGCGGTGGTATCCTGAAACTCCCCGAGAAAGA
CCTCCGTTGGCGCCTGGCACATGCGCTTGCCATCGGCCTCCTCCTCCTCG
CCCTCCATCTCCGCCTCCGCATCCCCGAATCACCTGAATTCCGCTTATTA
CAAAAGCATCAACGTCTTCGCTCCTGGCCCCTGGGTGAAGCGCTTAAAAC
GCAAACGGCTAACATTCTCTGGGTGTTGGGCGCCCTTTGGTTGGATGGAG
TGGTCCAGGTGATGGTGGTGGGGTGGGGTTTACCCACTCTACTCGCAGAA
CGTGGGATTTCAATAGATGCCTTGCTCTTTTCCTTGTCGATAGCAGCTTT
TGTCGAGGCACTTTTCACGGTGGTGGGCGGGTGGCTTGGGGATAGAGTTG
GGAGGCGAAAATTGTTCTTTGTGGCTTCGATGAGCATAGCCGTTGGGACT
GTGTTTTACTTTCATGCCCTCTTTCAGTTGTCGAGCCCGACGAGGGTTGT
TCCTATGTATGTGGCCAATATATTGTATCTGGGTGTGGCGTATGGCATGT
TGCAAGGTTCATTCCCGGCGCTGCTTGTCGAAGTGTTTCCTTCGAATGTG
AGGTACAGTGGAGTGTCGCTTGTTTATAACATCTCCCGAGTTTACTCGTC
GGGAGCTTGGCCCTACGTCAGTCAGGCGCTTTTGGCGGCAGGAAAAGGGT
CCAAGTTTAGTTTTCTGGCTTTGGAAAATGGAGTGAACCCTGTAGGCTTG
GTCCTATTCGTGTCGCTTGTTGCTGTAGTGGCCGCGGTGAGTGTGCTAAT
GATCCAGATTTATTCAAGCGGAGGGCGGGGTGGAGTGCCCCTGCCGTTCA
ATGTCTTGTCGAGAAGGAGTAAGGTGAGGGAGCACGTGGGAGGGGGGATT
CAGCAGCAGCTGCAGAGGGAGCAGATGGAGAAGGGGCTGGGTGTGGCGGG
GGAGGAGGGGCAGGAAGAGGAAAATGCGCAGCAGGGAGGAGTGGGGATGA
GGGAGCAGGAGAGAGGAATGGAGTTTGTGGGACAGGGGAGCTGGCGGAGA
AGGGGAAGGAGGAGAGAAGAGAGGTCTGATGCAGGTGGTGGAGGGCTAGA
CGTCAAGACGGAGGAACAGAAGTACTATCTGGAGGGCGAGGAGGAGGAGG
AGGAGGACTACGACGACGACATTGATGACAGCTATTACGAAGACGGCGAG
GAGGAAGAGGACGATCAGGATGACTCGGCCTCATCTGTATTCTCGGATTT
CGACGAAGAACGAGAACAAGATCTCCACCCTCGGCAATAATAGTGGCAGC
ATTCAGCGGAGCAGCAGCCGCCGGCGCCGTAAACGGAGAGATGTATATGT
CGGGGACGCGGGACGAAATCCACGGCGATTAAACGGTCGGGGATGAAAAG
GGACCGAAGGGAGTCGTATGATATTTAGAGTTGCGCCAAGCAGTGTTTGA
GTGGTTTTAAAGAAAGCAAACGTAAAGCAAACGTGGGAATGAAAAATAGG
GTCACCAAGCCGCCGCCAGAACATGAACAGCAACAGCAGCGTCGTACAGG
AAAGCGTAAAAAGGCAGATCTCGGACAGGGAGCCGAGAATAAGGAAAAGC
AGAATAACAAGAACAAATTCTGAAACGAGGAATAAAACTCAAATATGGGT
CATGAAATGTACAGTCAGAATAGCCCTGGTTGCCGCTGGCACACAAGCAG
CACAAACAGCAGTAGCAACAGCAACAGCAGTATCGTACAGCGAAGCGTCA
AGAGGGAGACCTCGAAGAGAGAGCAAAGAATAAGAAAGGGCAGATTTGTA
ATTATTGGTGAAAAGCAGCTAGCGTGTTAGTGTGTCCATCTGTTTGAGTG
AACAAACATTGGGATACTGAACAAAATCCCTTCCTCCATACTTAGACAAC
ATGCAGGAAAAAGGCGGAAAAGAGAAAGGCGCCCGCCTGTGAAAGGAGCA
ACACGAAAGAGTGTCGTAAGTAACCCAATATCACGCACAATCCTGGAGCA
ATTAACAAGGCTACAAGAATGGAAAATAGACTAATACCGCTAATTTTCAC
ACGTACATGATCAAAGAGGGGCGATGACACACACCTCTATCTCTTTCTCT
TTGCACACCTAGGTGTCTCTTCCTTCGCTCCGCAGATTCCCTCAATCAAT
CACTCTCACATTTTGTAACATAGCACGCCCAACGTCCCAAAGAAAACATA
TATAATGTGCCGTTGCTGATGCGTCACCTCGAATCCGAAGCCCTCCCCGA
TCGCAACGTGCCAGTGACTTCCAAATTTCTTGTCAAACGTATTCTGTTTT
TATAAAGTAGGATTGAGCAGAAACGAAGGGGGCGGCGTGAGAAGTGCAAG
ATTGTGCGTAAAGACTGGAAGGAGGAAACAGATGGTTATGCTACCCAGGA
CATTTCATAAATAGACACCTCAAAAAGCTCACTTTCATCATCGTGGCGGC
GGCCTCATAGTTTTTGGAAGTAGCGTGCTTGTCGACCGCCATGGTGATAA
GCTCCACAGCTTCGGTATACATTTCGGGTCCCATGTCATGGTGCTTTTGA
TTTCATGTAAATGAGAGATCGAAACGAAAAGGTTTGTGAGAACTCAATGA
AAATGTTGCTTCGATAGAAATGAAAATCAGCTCAGAAAAATGCAGGCGTT
TGGGAGAGACGCGGGGCGTGAGACTAGAAATTGAAAGCTAAACTGCCTGT
TTTCCCCAAAAGGCAGTCTTACAAAAAGGTGTCCAGTTACATGATTTGTG
GGCACAACCAAATATTTCTACCTTGACAAGTGGTTTGGTGATGAGTTTGC
GTAGAGCTTCTTGCTCATTGCTGCTGTACGAGGGCATAAGCGAAGCCATG
GAGGACGCCCCTGTTTGGTTAGTGCCGATGAAAGAGGAGGTCTGTCGGTA
ATGGAAGCGGCAAATCTTATGATGAG
back to top

protein sequence of NO06G03420.1

>NO06G03420.1-protein ID=NO06G03420.1-protein|Name=NO06G03420.1|organism=Nannochloropsis oceanica|type=polypeptide|length=710bp
MNRFSTLPLAPTALSFFNAYVFLDCGLNGRLPIGRVPRDIPFPGQQNLSL
PLFPDFLAQASSTGIAPLRHLRIFSLPPMHASTRLPPLEAARQSSGLQTQ
QQEAKKRKKSTAAHAIANAFFSSTLTWLLWSLYCVLAGSLFVDIFYPREW
RASEHRLLRILNYFTRPIGGIFFGHLGDTWGRTKTLTVCLCVMGLASACI
GLLPTEDTWGWGSWYLLLSLHALQGLAVGGEWGGCLLLVYEFCRHDRNKG
LVSALPQAGRALGFMLSSYITASLYDDTPSPSDADNGGGILKLPEKDLRW
RLAHALAIGLLLLALHLRLRIPESPEFRLLQKHQRLRSWPLGEALKTQTA
NILWVLGALWLDGVVQVMVVGWGLPTLLAERGISIDALLFSLSIAAFVEA
LFTVVGGWLGDRVGRRKLFFVASMSIAVGTVFYFHALFQLSSPTRVVPMY
VANILYLGVAYGMLQGSFPALLVEVFPSNVRYSGVSLVYNISRVYSSGAW
PYVSQALLAAGKGSKFSFLALENGVNPVGLVLFVSLVAVVAAVSVLMIQI
YSSGGRGGVPLPFNVLSRRSKVREHVGGGIQQQLQREQMEKGLGVAGEEG
QEEENAQQGGVGMREQERGMEFVGQGSWRRRGRRREERSDAGGGGLDVKT
EEQKYYLEGEEEEEEDYDDDIDDSYYEDGEEEEDDQDDSASSVFSDFDEE
REQDLHPRQ*
back to top

mRNA from alignment at chr6:945073..949166-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO06G03420.1 ID=NO06G03420.1|Name=NO06G03420.1|organism=Nannochloropsis oceanica|type=mRNA|length=4094bp|location=Sequence derived from alignment at chr6:945073..949166- (Nannochloropsis oceanica)
ATCTTCTCACATGAACCGGTTCAGCACCCTACCTCTCGCACCGACTGCCT
TGTCCTTTTTTAATGCGTATGTGTTTCTGGACTGTGGACTAAACGGAAGG
CTGCCGATTGGTAGGGTGCCCCGAGACATTCCTTTTCCAGGGCAGCAAAA
CCTCTCATTGCCTTTGTTCCCGGATTTCCTTGCACAGGCCTCAAGCACAG
GCATCGCGCCATTGCGCCATCTGAGGATTTTTTCACTACCCCCCATGCAT
GCCAGCACCCGCCTGCCCCCACTAGAGGCGGCACGGCAAAGCAGCGGCCT
TCAAACGCAACAGCAGGAGGCCAAAAAGGTGCGTGTCGTGAATGGGAGGG
TCGACGTGGTGTGTTCCGTGCACGCCGTACCTTTGCATGTGGTTCCGGGG
AAGGAGCGGTGCTGGTCAAGCGGGCGCTCCTCCATAAGTCGATGCTGTAG
CCTGCTACCTGTCCCAGCCCTGCAAGCCGGTACCAAGCCATCAAGGGGAT
GACGAGCATGTATCCTTCATCTCTTATCGAAGTGGCCATGATCCCGGCGA
CCCCCGTGCATGACCCACACTCCACTCAAACTGCACTACTTCTTTTCCTG
AAGTCTCAAATTAACTTCAATCCCTCCTCTTTTCTCATTTCTGCAGAGGA
AAAAAAGCACCGCCGCCCACGCCATAGCAAACGCCTTCTTCTCCTCCACC
CTAACCTGGCTCCTGTGGTCACTCTACTGCGTGCTAGCAGGCTCCCTTTT
CGTTGATATATTTTATCCACGTGAATGGCGGGCCTCGGAACATCGCCTCC
TACGTATCCTCAACTACTTTACTCGGCCCATCGGCGGCATCTTCTTCGGA
CACCTAGGTGACACATGGGGACGAACCAAAACCCTTACTGTCTGCCTCTG
CGTTATGGGGCTCGCCTCTGCGTGCATTGGTCTTCTCCCCACGGAAGACA
CATGGGGTTGGGGGTCTTGGTACCTGCTTCTCTCGCTGCACGCACTTCAG
GGCTTGGCCGTGGGCGGGGAGTGGGGCGGTTGCTTACTCTTAGTTTACGA
ATTTTGCCGTCACGATCGGAATAAGGGCCTCGTTTCAGCCCTTCCCCAAG
CAGGACGGGCCTTGGGTTTTATGCTCTCCTCCTACATTACGGCCAGCTTA
TATGACGACACTCCCTCCCCTTCCGATGCTGACAATGGCGGTGGTATCCT
GAAACTCCCCGAGAAAGACCTCCGTTGGCGCCTGGCACATGCGCTTGCCA
TCGGCCTCCTCCTCCTCGCCCTCCATCTCCGCCTCCGCATCCCCGAATCA
CCTGAATTCCGCTTATTACAAAAGCATCAACGTCTTCGCTCCTGGCCCCT
GGGTGAAGCGCTTAAAACGCAAACGGCTAACATTCTCTGGGTGTTGGGCG
CCCTTTGGTTGGATGGAGTGGTCCAGGTGATGGTGGTGGGGTGGGGTTTA
CCCACTCTACTCGCAGAACGTGGGATTTCAATAGATGCCTTGCTCTTTTC
CTTGTCGATAGCAGCTTTTGTCGAGGCACTTTTCACGGTGGTGGGCGGGT
GGCTTGGGGATAGAGTTGGGAGGCGAAAATTGTTCTTTGTGGCTTCGATG
AGCATAGCCGTTGGGACTGTGTTTTACTTTCATGCCCTCTTTCAGTTGTC
GAGCCCGACGAGGGTTGTTCCTATGTATGTGGCCAATATATTGTATCTGG
GTGTGGCGTATGGCATGTTGCAAGGTTCATTCCCGGCGCTGCTTGTCGAA
GTGTTTCCTTCGAATGTGAGGTACAGTGGAGTGTCGCTTGTTTATAACAT
CTCCCGAGTTTACTCGTCGGGAGCTTGGCCCTACGTCAGTCAGGCGCTTT
TGGCGGCAGGAAAAGGGTCCAAGTTTAGTTTTCTGGCTTTGGAAAATGGA
GTGAACCCTGTAGGCTTGGTCCTATTCGTGTCGCTTGTTGCTGTAGTGGC
CGCGGTGAGTGTGCTAATGATCCAGATTTATTCAAGCGGAGGGCGGGGTG
GAGTGCCCCTGCCGTTCAATGTCTTGTCGAGAAGGAGTAAGGTGAGGGAG
CACGTGGGAGGGGGGATTCAGCAGCAGCTGCAGAGGGAGCAGATGGAGAA
GGGGCTGGGTGTGGCGGGGGAGGAGGGGCAGGAAGAGGAAAATGCGCAGC
AGGGAGGAGTGGGGATGAGGGAGCAGGAGAGAGGAATGGAGTTTGTGGGA
CAGGGGAGCTGGCGGAGAAGGGGAAGGAGGAGAGAAGAGAGGTCTGATGC
AGGTGGTGGAGGGCTAGACGTCAAGACGGAGGAACAGAAGTACTATCTGG
AGGGCGAGGAGGAGGAGGAGGAGGACTACGACGACGACATTGATGACAGC
TATTACGAAGACGGCGAGGAGGAAGAGGACGATCAGGATGACTCGGCCTC
ATCTGTATTCTCGGATTTCGACGAAGAACGAGAACAAGATCTCCACCCTC
GGCAATAATAGTGGCAGCATTCAGCGGAGCAGCAGCCGCCGGCGCCGTAA
ACGGAGAGATGTATATGTCGGGGACGCGGGACGAAATCCACGGCGATTAA
ACGGTCGGGGATGAAAAGGGACCGAAGGGAGTCGTATGATATTTAGAGTT
GCGCCAAGCAGTGTTTGAGTGGTTTTAAAGAAAGCAAACGTAAAGCAAAC
GTGGGAATGAAAAATAGGGTCACCAAGCCGCCGCCAGAACATGAACAGCA
ACAGCAGCGTCGTACAGGAAAGCGTAAAAAGGCAGATCTCGGACAGGGAG
CCGAGAATAAGGAAAAGCAGAATAACAAGAACAAATTCTGAAACGAGGAA
TAAAACTCAAATATGGGTCATGAAATGTACAGTCAGAATAGCCCTGGTTG
CCGCTGGCACACAAGCAGCACAAACAGCAGTAGCAACAGCAACAGCAGTA
TCGTACAGCGAAGCGTCAAGAGGGAGACCTCGAAGAGAGAGCAAAGAATA
AGAAAGGGCAGATTTGTAATTATTGGTGAAAAGCAGCTAGCGTGTTAGTG
TGTCCATCTGTTTGAGTGAACAAACATTGGGATACTGAACAAAATCCCTT
CCTCCATACTTAGACAACATGCAGGAAAAAGGCGGAAAAGAGAAAGGCGC
CCGCCTGTGAAAGGAGCAACACGAAAGAGTGTCGTAAGTAACCCAATATC
ACGCACAATCCTGGAGCAATTAACAAGGCTACAAGAATGGAAAATAGACT
AATACCGCTAATTTTCACACGTACATGATCAAAGAGGGGCGATGACACAC
ACCTCTATCTCTTTCTCTTTGCACACCTAGGTGTCTCTTCCTTCGCTCCG
CAGATTCCCTCAATCAATCACTCTCACATTTTGTAACATAGCACGCCCAA
CGTCCCAAAGAAAACATATATAATGTGCCGTTGCTGATGCGTCACCTCGA
ATCCGAAGCCCTCCCCGATCGCAACGTGCCAGTGACTTCCAAATTTCTTG
TCAAACGTATTCTGTTTTTATAAAGTAGGATTGAGCAGAAACGAAGGGGG
CGGCGTGAGAAGTGCAAGATTGTGCGTAAAGACTGGAAGGAGGAAACAGA
TGGTTATGCTACCCAGGACATTTCATAAATAGACACCTCAAAAAGCTCAC
TTTCATCATCGTGGCGGCGGCCTCATAGTTTTTGGAAGTAGCGTGCTTGT
CGACCGCCATGGTGATAAGCTCCACAGCTTCGGTATACATTTCGGGTCCC
ATGTCATGGTGCTTTTGATTTCATGTAAATGAGAGATCGAAACGAAAAGG
TTTGTGAGAACTCAATGAAAATGTTGCTTCGATAGAAATGAAAATCAGCT
CAGAAAAATGCAGGCGTTTGGGAGAGACGCGGGGCGTGAGACTAGAAATT
GAAAGCTAAACTGCCTGTTTTCCCCAAAAGGCAGTCTTACAAAAAGGTGT
CCAGTTACATGATTTGTGGGCACAACCAAATATTTCTACCTTGACAAGTG
GTTTGGTGATGAGTTTGCGTAGAGCTTCTTGCTCATTGCTGCTGTACGAG
GGCATAAGCGAAGCCATGGAGGACGCCCCTGTTTGGTTAGTGCCGATGAA
AGAGGAGGTCTGTCGGTAATGGAAGCGGCAAATCTTATGATGAG
back to top

Coding sequence (CDS) from alignment at chr6:945073..949166-

>NO06G03420.1 ID=NO06G03420.1|Name=NO06G03420.1|organism=Nannochloropsis oceanica|type=CDS|length=2130bp|location=Sequence derived from alignment at chr6:945073..949166- (Nannochloropsis oceanica)
ATGAACCGGTTCAGCACCCTACCTCTCGCACCGACTGCCTTGTCCTTTTT
TAATGCGTATGTGTTTCTGGACTGTGGACTAAACGGAAGGCTGCCGATTG
GTAGGGTGCCCCGAGACATTCCTTTTCCAGGGCAGCAAAACCTCTCATTG
CCTTTGTTCCCGGATTTCCTTGCACAGGCCTCAAGCACAGGCATCGCGCC
ATTGCGCCATCTGAGGATTTTTTCACTACCCCCCATGCATGCCAGCACCC
GCCTGCCCCCACTAGAGGCGGCACGGCAAAGCAGCGGCCTTCAAACGCAA
CAGCAGGAGGCCAAAAAGAGGAAAAAAAGCACCGCCGCCCACGCCATAGC
AAACGCCTTCTTCTCCTCCACCCTAACCTGGCTCCTGTGGTCACTCTACT
GCGTGCTAGCAGGCTCCCTTTTCGTTGATATATTTTATCCACGTGAATGG
CGGGCCTCGGAACATCGCCTCCTACGTATCCTCAACTACTTTACTCGGCC
CATCGGCGGCATCTTCTTCGGACACCTAGGTGACACATGGGGACGAACCA
AAACCCTTACTGTCTGCCTCTGCGTTATGGGGCTCGCCTCTGCGTGCATT
GGTCTTCTCCCCACGGAAGACACATGGGGTTGGGGGTCTTGGTACCTGCT
TCTCTCGCTGCACGCACTTCAGGGCTTGGCCGTGGGCGGGGAGTGGGGCG
GTTGCTTACTCTTAGTTTACGAATTTTGCCGTCACGATCGGAATAAGGGC
CTCGTTTCAGCCCTTCCCCAAGCAGGACGGGCCTTGGGTTTTATGCTCTC
CTCCTACATTACGGCCAGCTTATATGACGACACTCCCTCCCCTTCCGATG
CTGACAATGGCGGTGGTATCCTGAAACTCCCCGAGAAAGACCTCCGTTGG
CGCCTGGCACATGCGCTTGCCATCGGCCTCCTCCTCCTCGCCCTCCATCT
CCGCCTCCGCATCCCCGAATCACCTGAATTCCGCTTATTACAAAAGCATC
AACGTCTTCGCTCCTGGCCCCTGGGTGAAGCGCTTAAAACGCAAACGGCT
AACATTCTCTGGGTGTTGGGCGCCCTTTGGTTGGATGGAGTGGTCCAGGT
GATGGTGGTGGGGTGGGGTTTACCCACTCTACTCGCAGAACGTGGGATTT
CAATAGATGCCTTGCTCTTTTCCTTGTCGATAGCAGCTTTTGTCGAGGCA
CTTTTCACGGTGGTGGGCGGGTGGCTTGGGGATAGAGTTGGGAGGCGAAA
ATTGTTCTTTGTGGCTTCGATGAGCATAGCCGTTGGGACTGTGTTTTACT
TTCATGCCCTCTTTCAGTTGTCGAGCCCGACGAGGGTTGTTCCTATGTAT
GTGGCCAATATATTGTATCTGGGTGTGGCGTATGGCATGTTGCAAGGTTC
ATTCCCGGCGCTGCTTGTCGAAGTGTTTCCTTCGAATGTGAGGTACAGTG
GAGTGTCGCTTGTTTATAACATCTCCCGAGTTTACTCGTCGGGAGCTTGG
CCCTACGTCAGTCAGGCGCTTTTGGCGGCAGGAAAAGGGTCCAAGTTTAG
TTTTCTGGCTTTGGAAAATGGAGTGAACCCTGTAGGCTTGGTCCTATTCG
TGTCGCTTGTTGCTGTAGTGGCCGCGGTGAGTGTGCTAATGATCCAGATT
TATTCAAGCGGAGGGCGGGGTGGAGTGCCCCTGCCGTTCAATGTCTTGTC
GAGAAGGAGTAAGGTGAGGGAGCACGTGGGAGGGGGGATTCAGCAGCAGC
TGCAGAGGGAGCAGATGGAGAAGGGGCTGGGTGTGGCGGGGGAGGAGGGG
CAGGAAGAGGAAAATGCGCAGCAGGGAGGAGTGGGGATGAGGGAGCAGGA
GAGAGGAATGGAGTTTGTGGGACAGGGGAGCTGGCGGAGAAGGGGAAGGA
GGAGAGAAGAGAGGTCTGATGCAGGTGGTGGAGGGCTAGACGTCAAGACG
GAGGAACAGAAGTACTATCTGGAGGGCGAGGAGGAGGAGGAGGAGGACTA
CGACGACGACATTGATGACAGCTATTACGAAGACGGCGAGGAGGAAGAGG
ACGATCAGGATGACTCGGCCTCATCTGTATTCTCGGATTTCGACGAAGAA
CGAGAACAAGATCTCCACCCTCGGCAATAA
back to top
Synonyms
Publications