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Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
chr6 | genome | chr6:911888..915904 - |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
BLAST of NO06G03270.1 vs.
Match: EWM26321.1 (cell division protein [Nannochloropsis gaditana]) HSP 1 Score: 396.7 bits (1018), Expect = 5.600e-107 Identity = 205/268 (76.49%), Postives = 226/268 (84.33%), Query Frame = 0
Query: 1 MGKVVRDLYYRRAKEVGFRARSAFKLLQLDTEFSLFQGVQKAVDLCAAPGSWSQVLATRLYPNSTLGKEIEGERERIVAVDLQEMAPIPGVRQLQGDITLQITADTIIGHFGGERVDLVVCDGAPDVTGLHDMDEFLQAQLMFAALTITTHVLKNGGKFVAKVFRGRDLTLLAAQLRLFFESVTVAKPASSRANSSECFVVCEGFLGPVPEHGYIPQMVVST----STTTATTTGGEERRAQDPAYGGSASGRM-VGPYVERGDLSGF 264
MGKVVRDLYYR+AKEVGFRARSAFKLLQLD EF LF+ VQKAVDLCAAPGSWSQVLATRLYP+S + GERER++AVDLQEMAPIPGVRQLQGDIT Q TADTIIGHF G+RVDLVVCDGAPDVTGLHDMDEFLQAQL+F AL ITTHVL +GGKFVAKVFRGRDLTLLAAQLRLFFES+TVAKPASSR NSSECFVVCEGF GP+P HGYIP+MV T S A T + +R ++ G + + ++ V YVE+GDLSGF
Sbjct: 1 MGKVVRDLYYRKAKEVGFRARSAFKLLQLDEEFGLFRNVQKAVDLCAAPGSWSQVLATRLYPDSAFTDDKGGERERVIAVDLQEMAPIPGVRQLQGDITSQATADTIIGHFEGQRVDLVVCDGAPDVTGLHDMDEFLQAQLIFGALAITTHVLASGGKFVAKVFRGRDLTLLAAQLRLFFESITVAKPASSRINSSECFVVCEGFQGPIPAHGYIPEMVTPTLGQGSRDQAAQTEKDAQRDEEEDSGENRALKIAVRCYVEQGDLSGF 268
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO06G03270.1 ID=NO06G03270.1|Name=NO06G03270.1|organism=Nannochloropsis oceanica|type=mRNA|length=3733bp CCCTCCCTCCACCCCAAAAAATGCTGCATGAGATATCGGCGGTTCATTCC CCCGCACTCACCCTCACAATCGGGCTGCCTGCGTCCCTCCCGTCAGCAAC CTGGTCAATGTATGCCTGGGCTATCTTTACAGCTGATGCCTTCCCCACCT CATTTGCCCCCGACCCCACCCAGAAAAATCCGTTTCGAAGATATCAAACA CAAACACATCCTTATCGCTCTCCTCTTAATCCACCTGCGCAAAATTCACG ATCTCCTCTACCTTCATCCTCCCCTTCGCATCGCTAACTTGGAACATCCT TGGCTCCCGAGGGGCCACCTGCCCTCCCGTCCCTTTCTCTAGGCTTCCCA AGCTCGTCCAAAACTCATACGGTTCCTCCCCCTCTTCCACCACCTCCATC CCTCCCTCCTCCCCTTCCTCCATCCCCACCTCCACCTGCTGCGTCAACAT GACCTCCCCCAGCACCACCGTTGCCTCCCTCTCTGCGGCTTTGCTCCATT TAATCGTCCTGGGGCAAAGACAAAACAAAACAATCGCGCGAATTGAGATT TTGGGGCGTTGTGGGCATTTGGACAGCGCATACATTCTCCAGCGTGGTCC CCTTGACATGAAACAAGGCCGGTGCCAGCAGCAGCAATCGACGCAGTAGT GGCAGAAGCCTTCCCTTTTTCCTCCATCTTGGACCCTTGTCGCTGTCTGG CGCTACGAAAGCCGCTCTCCACGCTCCCTGTGTGCACGACCAACTGTCCC TTAAACAATCGCCGAAAATGCGCGGGCTCCTTCCCTTAAACCACCCTCAC TTGCACGGGAACCCTTCCCTGCATCCCGTCCAACCCGATGGCCAACAACG CACACGCGCTCTATTCATCCACACTGCCTCCTGTGCCCTGCCACGTGTAG GTTATCTGATTCTCCCTCGCCTCCTTTGAACATGTGTACAGAACCAAGTA GGAATCGCTGCTGAAAAAGTGTCCGTGCTGAGAGGGAGGAACCTCGACCT TTTCCTTTTTCTCCACACACCACACCTGCACCTTGCCTTTCCCGTTATCC CCCTCTTTAATTCCATCTCCTTCTCCTGCTGCAGCTGCTGCTGCTGCTCC TTTATCCAGCATGGCCTTGCTTCAGTCGACTGGATCGCCTTCCGTGGTGG CGAGGGAGGAGGAAGGGCCACACCGCTGCTGGCGCTGCTGTTGATCCAGC TGCTCCCCATGTCCATGGGCAAGGGGGCGTTCCACTCAGCAAAATAACTT CGGAGGGAGGGAAGGAAGGAGGGAGGAAGGCAACAAATCCAAATTCGAAT TTGAAAGCTTGTTACTTTCTATTTATTGGGAGCAGGGTACATCGAGGATG ACGGGAATGTAGGGAGGAATCCGACGGACGGAGTAGCCGGCGGGGTCGGA CATTAATATTAAAGCCCTTACCTGATATGTACCGCCATCTCCCCCCCTTT CATCACCCGCTTCACGGGCATGTTAATATCGACCGATGGGATTTCTCCAG GGAGGTGGTCGCCAAGCGTATCCCCCCCTCTTTTTCTTCGGCCGTCGTCC CTTTCCCCACCCACACAGACACCCCACCTTAACGTCAACTCCCCACTCAT CTCCGACACACGAACAAGCGATATCTTCTCACTCGCCGTCTCCTCAGCCA CTATGTCAGCCCCTCCCTTTTTCGTCACAGGCTTCCTCTCCTCCCCAAAT GCCGTCCCAAAATCCTTGTACTTGTTCTCATCATCCTTCTCCCATTCGTT GACAAGGATCAAATCTGCACGTCCACTGAGTTCCATATCGCGGATGCGCA AAATAAGCTCCAAAACCTTAGTCTTCTCGGCTCGATTCGCCTCGGGCACA TGGTACAAATAGAGTTTAAGTCCCTTGTCCAACATAAAGCAATCGCCCAT GTTCAGGCTGCTGTGCGCGAGAGGGACTTCCGTGGCATGCGCCATGCGAG CGCCTTTGATGTGCAGCATGCGGATTGGCCAGACGTCGCGTTCCGCCTTT CTTAAACCGCTCTTGACCCCCCCAGCCAGGTATCGGAGGTCACCCGTCGT TTGAAATACGACATAAACACGGCCGACTCGTGCCCCTGTGTCTCACGGTA CTGCACTGCGACCCCATCCAACGCATCATCGAGTTCCACTGCTGTGAAAG CAGCCACTCCAATCTCGTCCTGGCTGCTTCGGAGCCCAACCAGAACAGGA CCGAGTGTTGAAGGGCACTAGACTTTTTCTGTGTAGTAGCTAAGAATGTA GGCATCGAAAAAGAGCCCCGTCACGGCCTCCTGCCTCACGGGCTTTAGGT TCTCGATGCGCCATAGCTCGAGCCCCGGGGTGCTGCCAGAGACTCGGAAA GCTGGGTCGACGGCGGGTAAGGCCACCATCGCTCGCTCATAACAATGCTT TGGAAGTTGCCTGTGTTGCAGAGAAGTGGAGACGGTGAATGTTGTGAGTT GGAGAGAACGAGCACACGATACGACCAGGTACCGGCACAGCACAGGCCCT AGTACATTAATTGCCATCCCTCTGGTGATCAATAATGGCAAAACTTACAC AGGAAGCCACGCCGACGACAAGCAGTAGAAACGCCGTCGAAAGCCGGAGG GCGATGTCCGGAGGGCAATAGCTCGTGCGGGCCGTCCGAGACGTAGGCAA GCTACCATACCTTTGCTTTTGTGCTTTGGTAAAGTCACGCGTCTGCTCAT TGTCACAGTCAACAATAGAAAAATTTCCCACCCACCTACCCCCGCGACAC CACAGGAGCCAAGCCCCCCATCCCCCCCGGCAGAGTAAAGTCAGCCAGCC AAGGCCAAAGCGTCATGGGCAAGGTGGTGCGGGATCTGTATTACCGCAGG GCCAAAGAAGTGGGCTTCCGCGCTCGCAGCGCCTTCAAGCTGCTGCAATT GGACACAGAATTCAGCCTCTTTCAAGGCGTACAAAAGGCAGTGGACCTCT GTGCGGCCCCAGGGAGTTGGAGTCAAGTGTTGGCCACACGGCTCTACCCG AATAGCACGTTGGGAAAGGAGATCGAGGGGGAACGGGAGCGGATCGTTGC CGTGGACTTGCAAGAGATGGCGCCGATTCCCGGCGTGCGGCAGCTGCAAG GAGACATCACCTTGCAGATAACGGCCGACACTATCATCGGACACTTTGGC GGGGAACGGGTGGACCTGGTGGTGTGTGACGGCGCCCCAGACGTGACGGG CCTACACGATATGGACGAATTCCTTCAAGCCCAACTCATGTTTGCCGCAC TCACCATCACTACACATGTTCTCAAAAATGGAGGCAAATTTGTCGCCAAG GTTTTTAGAGGACGTGATCTGACCCTGCTGGCGGCGCAATTGCGTCTGTT TTTTGAGAGTGTGACAGTTGCAAAACCAGCGAGTAGTCGCGCCAATTCAA GTGAGTGTTTTGTGGTGTGTGAGGGGTTCTTGGGGCCGGTGCCTGAGCAT GGCTACATCCCCCAGATGGTCGTGTCAACTTCTACTACCACCGCAACTAC GACGGGGGGAGAGGAGAGGAGAGCACAAGATCCAGCGTATGGCGGAAGCG CGTCGGGAAGGATGGTGGGGCCCTACGTGGAACGGGGGGATTTGTCGGGT TTCGAGGTAGCAGCAGCCACCACGTCTTGACATTCGAATAGTGGGGGATA TAGCATTTATTCCAAATGTGTATTTTAGAAGTAAGAAGGGTGGTGTACAA ATAAATAGTAAACCAGAAATATCACTACTGACC back to topprotein sequence of NO06G03270.1 >NO06G03270.1-protein ID=NO06G03270.1-protein|Name=NO06G03270.1|organism=Nannochloropsis oceanica|type=polypeptide|length=272bp MGKVVRDLYYRRAKEVGFRARSAFKLLQLDTEFSLFQGVQKAVDLCAAPG SWSQVLATRLYPNSTLGKEIEGERERIVAVDLQEMAPIPGVRQLQGDITL QITADTIIGHFGGERVDLVVCDGAPDVTGLHDMDEFLQAQLMFAALTITT HVLKNGGKFVAKVFRGRDLTLLAAQLRLFFESVTVAKPASSRANSSECFV VCEGFLGPVPEHGYIPQMVVSTSTTTATTTGGEERRAQDPAYGGSASGRM VGPYVERGDLSGFEVAAATTS* back to topmRNA from alignment at chr6:911888..915904- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO06G03270.1 ID=NO06G03270.1|Name=NO06G03270.1|organism=Nannochloropsis oceanica|type=mRNA|length=4017bp|location=Sequence derived from alignment at chr6:911888..915904- (Nannochloropsis oceanica) CCCTCCCTCCACCCCAAAAAATGCTGCATGAGATATCGGCGGTTCATTCC
CCCGCACTCACCCTCACAATCGGGCTGCCTGCGTCCCTCCCGTCAGCAAC
CTGGTCAATGTATGCCTGGGCTATCTTTACAGCTGATGCCTTCCCCACCT
CATTTGCCCCCGACCCCACCCAGAAAAATCCGTTTCGAAGATATCAAACA
CAAACACATCCTTATCGCTCTCCTCTTAATCCACCTGCGCAAAATTCACG
ATCTCCTCTACCTTCATCCTCCCCTTCGCATCGCTAACTTGGAACATCCT
TGGCTCCCGAGGGGCCACCTGCCCTCCCGTCCCTTTCTCTAGGCTTCCCA
AGCTCGTCCAAAACTCATACGGTTCCTCCCCCTCTTCCACCACCTCCATC
CCTCCCTCCTCCCCTTCCTCCATCCCCACCTCCACCTGCTGCGTCAACAT
GACCTCCCCCAGCACCACCGTTGCCTCCCTCTCTGCGGCTTTGCTCCATT
TAATCGTCCTGGGGCAAAGACAAAACAAAACAATCGCGCGAATTGAGATT
TTGGGGCGTTGTGGGCATTTGGACAGCGCATACATTCTCCAGCGTGGTCC
CCTTGACATGAAACAAGGCCGGTGCCAGCAGCAGCAATCGACGCAGTAGT
GGCAGAAGCCTTCCCTTTTTCCTCCATCTTGGACCCTTGTCGCTGTCTGG
CGCTACGAAAGCCGCTCTCCACGCTCCCTGTGTGCACGACCAACTGTCCC
TTAAACAATCGCCGAAAATGCGCGGGCTCCTTCCCTTAAACCACCCTCAC
TTGCACGGGAACCCTTCCCTGCATCCCGTCCAACCCGATGGCCAACAACG
CACACGCGCTCTATTCATCCACACTGCCTCCTGTGCCCTGCCACGTGTAG
GTTATCTGATTCTCCCTCGCCTCCTTTGAACATGTGTACAGAACCAAGTA
GGAATCGCTGCTGAAAAAGTGTCCGTGCTGAGAGGGAGGAACCTCGACCT
TTTCCTTTTTCTCCACACACCACACCTGCACCTTGCCTTTCCCGTTATCC
CCCTCTTTAATTCCATCTCCTTCTCCTGCTGCAGCTGCTGCTGCTGCTCC
TTTATCCAGCATGGCCTTGCTTCAGTCGACTGGATCGCCTTCCGTGGTGG
CGAGGGAGGAGGAAGGGCCACACCGCTGCTGGCGCTGCTGTTGATCCAGC
TGCTCCCCATGTCCATGGGCAAGGGGGCGTTCCACTCAGCAAAATAACTT
CGGAGGGAGGGAAGGAAGGAGGGAGGAAGGCAACAAATCCAAATTCGAAT
TTGAAAGCTTGTTACTTTCTATTTATTGGGAGCAGGGTACATCGAGGATG
ACGGGAATGTAGGGAGGAATCCGACGGACGGAGTAGCCGGCGGGGTCGGA
CATTAATATTAAAGCCCTTACCTGATATGTACCGCCATCTCCCCCCCTTT
CATCACCCGCTTCACGGGCATGTTAATATCGACCGATGGGATTTCTCCAG
GGAGGTGGTCGCCAAGCGTATCCCCCCCTCTTTTTCTTCGGCCGTCGTCC
CTTTCCCCACCCACACAGACACCCCACCTTAACGTCAACTCCCCACTCAT
CTCCGACACACGAACAAGCGATATCTTCTCACTCGCCGTCTCCTCAGCCA
CTATGTCAGCCCCTCCCTTTTTCGTCACAGGCTTCCTCTCCTCCCCAAAT
GCCGTCCCAAAATCCTTGTACTTGTTCTCATCATCCTTCTCCCATTCGTT
GACAAGGATCAAATCTGCACGTCCACTGAGTTCCATATCGCGGATGCGCA
AAATAAGCTCCAAAACCTTAGTCTTCTCGGCTCGATTCGCCTCGGGCACA
TGGTACAAATAGAGTTTAAGTCCCTTGTCCAACATAAAGCAATCGCCCAT
GTTCAGGCTGCTGTGCGCGAGAGGGACTTCCGTGGCATGCGCCATGCGAG
CGCCTTTGATGTGCAGCATGCGGATTGGCCAGACGTCGCGTTCCGCCTTT
CTTAAACCGCTCTTGACCCCCCCAGCCAGGTATCGGAGGTCACCCGTCGT
TTGAAATACGACATAAACACGGCCGACTCGTGCCCCTGTGTCTCACGGTA
CTGCACTGCGACCCCATCCAACGCATCATCGAGTTCCACTGCTGTGAAAG
CAGCCACTCCAATCTCGTCCTGGCTGCTTCGGAGCCCAACCAGAACAGGA
CCGAGTGTTGAAGGGCACTAGACTTTTTCTGTGTAGTAGCTAAGAATGTA
GGCATCGAAAAAGAGCCCCGTCACGGCCTCCTGCCTCACGGGCTTTAGGT
TCTCGATGCGCCATAGCTCGAGCCCCGGGGTGCTGCCAGAGACTCGGAAA
GCTGGGTCGACGGCGGGTAAGGCCACCATCGCTCGCTCATAACAATGCTT
TGGAAGTTGCCTGTGTTGCAGAGAAGTGGAGACGGTGAATGTTGTGAGTT
GGAGAGAACGAGCACACGATACGACCAGGTACCGGCACAGCACAGGCCCT
AGTACATTAATTGCCATCCCTCTGGTGATCAATAATGGCAAAACTTACAC
AGGAAGCCACGCCGACGACAAGCAGTAGAAACGCCGTCGAAAGCCGGAGG
GCGATGTCCGGAGGGCAATAGCTCGTGCGGGCCGTCCGAGACGTAGGCAA
GCTACCATACCTTTGCTTTTGTGCTTTGGTAAAGTCACGCGTCTGCTCAT
TGTCACAGTCAACAATAGAAAAATTTCCCACCCACCTACCCCCGCGACAC
CACAGGAGCCAAGCCCCCCATCCCCCCCGGCAGAGTAAAGTCAGCCAGCC
AAGGCCAAAGCGTCATGGGCAAGGTGGTGCGGGATCTGTATTACCGCAGG
GCCAAAGAAGTGGGCTTCCGCGCTCGCAGCGCCTTCAAGCTGCTGCAATT
GGACACAGAATTCAGCCTCTTTCAAGGCGTACAAAAGGCAGTGGACCTCT
GTGCGGCCCCAGGGAGTTGGAGTCAAGTGTTGGCCACACGGCTCTACCCG
AATAGCACGTTGGGAAAGGAGATCGAGGGGGAACGGGAGCGGATCGTTGC
CGTGGACTTGCAAGAGATGGCGCCGATTCCCGGCGTGCGGCAGCTGCAAG
GAGACATCACCTTGCAGGTGAGGGAGAGGGGAGGAAAGTGCGCTCGGTGT
GGAGGTAGGCAAATGAAGGGGGAAGAGGTAGAGAGAGGGCCCGGCTCTGG
CACTATATTAGCATTTGCACGATATTGTTTTGAATGAATTAATTTGCGCA
TGGAATAGCAAGGCTAGAGGAGTGGAGGGGGCGAGAAAGCGCTGTTGGAT
GCGGTGTACGTGTCGTGAATGAACCCACCTCCTCTACGCATCAATCCCTT
AATAATGTTTTCCTTCCTTTTTTCTCACTCCTCTCCGACACCACCATATA
GATAACGGCCGACACTATCATCGGACACTTTGGCGGGGAACGGGTGGACC
TGGTGGTGTGTGACGGCGCCCCAGACGTGACGGGCCTACACGATATGGAC
GAATTCCTTCAAGCCCAACTCATGTTTGCCGCACTCACCATCACTACACA
TGTTCTCAAAAATGGAGGCAAATTTGTCGCCAAGGTTTTTAGAGGACGTG
ATCTGACCCTGCTGGCGGCGCAATTGCGTCTGTTTTTTGAGAGTGTGACA
GTTGCAAAACCAGCGAGTAGTCGCGCCAATTCAAGTGAGTGTTTTGTGGT
GTGTGAGGGGTTCTTGGGGCCGGTGCCTGAGCATGGCTACATCCCCCAGA
TGGTCGTGTCAACTTCTACTACCACCGCAACTACGACGGGGGGAGAGGAG
AGGAGAGCACAAGATCCAGCGTATGGCGGAAGCGCGTCGGGAAGGATGGT
GGGGCCCTACGTGGAACGGGGGGATTTGTCGGGTTTCGAGGTAGCAGCAG
CCACCACGTCTTGACATTCGAATAGTGGGGGATATAGCATTTATTCCAAA
TGTGTATTTTAGAAGTAAGAAGGGTGGTGTACAAATAAATAGTAAACCAG
AAATATCACTACTGACC back to topCoding sequence (CDS) from alignment at chr6:911888..915904- >NO06G03270.1 ID=NO06G03270.1|Name=NO06G03270.1|organism=Nannochloropsis oceanica|type=CDS|length=816bp|location=Sequence derived from alignment at chr6:911888..915904- (Nannochloropsis oceanica) ATGGGCAAGGTGGTGCGGGATCTGTATTACCGCAGGGCCAAAGAAGTGGG CTTCCGCGCTCGCAGCGCCTTCAAGCTGCTGCAATTGGACACAGAATTCA GCCTCTTTCAAGGCGTACAAAAGGCAGTGGACCTCTGTGCGGCCCCAGGG AGTTGGAGTCAAGTGTTGGCCACACGGCTCTACCCGAATAGCACGTTGGG AAAGGAGATCGAGGGGGAACGGGAGCGGATCGTTGCCGTGGACTTGCAAG AGATGGCGCCGATTCCCGGCGTGCGGCAGCTGCAAGGAGACATCACCTTG CAGATAACGGCCGACACTATCATCGGACACTTTGGCGGGGAACGGGTGGA CCTGGTGGTGTGTGACGGCGCCCCAGACGTGACGGGCCTACACGATATGG ACGAATTCCTTCAAGCCCAACTCATGTTTGCCGCACTCACCATCACTACA CATGTTCTCAAAAATGGAGGCAAATTTGTCGCCAAGGTTTTTAGAGGACG TGATCTGACCCTGCTGGCGGCGCAATTGCGTCTGTTTTTTGAGAGTGTGA CAGTTGCAAAACCAGCGAGTAGTCGCGCCAATTCAAGTGAGTGTTTTGTG GTGTGTGAGGGGTTCTTGGGGCCGGTGCCTGAGCATGGCTACATCCCCCA GATGGTCGTGTCAACTTCTACTACCACCGCAACTACGACGGGGGGAGAGG AGAGGAGAGCACAAGATCCAGCGTATGGCGGAAGCGCGTCGGGAAGGATG GTGGGGCCCTACGTGGAACGGGGGGATTTGTCGGGTTTCGAGGTAGCAGC AGCCACCACGTCTTGA back to top
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