NO06G03270.1, NO06G03270.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO06G03270.1
Unique NameNO06G03270.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3733
Alignment locationchr6:911888..915904 -

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Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr6genomechr6:911888..915904 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
BLAST of NO06G03270.1 vs.
Match: EWM26321.1 (cell division protein [Nannochloropsis gaditana])

HSP 1 Score: 396.7 bits (1018), Expect = 5.600e-107
Identity = 205/268 (76.49%), Postives = 226/268 (84.33%), Query Frame = 0
Query:    1 MGKVVRDLYYRRAKEVGFRARSAFKLLQLDTEFSLFQGVQKAVDLCAAPGSWSQVLATRLYPNSTLGKEIEGERERIVAVDLQEMAPIPGVRQLQGDITLQITADTIIGHFGGERVDLVVCDGAPDVTGLHDMDEFLQAQLMFAALTITTHVLKNGGKFVAKVFRGRDLTLLAAQLRLFFESVTVAKPASSRANSSECFVVCEGFLGPVPEHGYIPQMVVST----STTTATTTGGEERRAQDPAYGGSASGRM-VGPYVERGDLSGF 264
            MGKVVRDLYYR+AKEVGFRARSAFKLLQLD EF LF+ VQKAVDLCAAPGSWSQVLATRLYP+S    +  GERER++AVDLQEMAPIPGVRQLQGDIT Q TADTIIGHF G+RVDLVVCDGAPDVTGLHDMDEFLQAQL+F AL ITTHVL +GGKFVAKVFRGRDLTLLAAQLRLFFES+TVAKPASSR NSSECFVVCEGF GP+P HGYIP+MV  T    S   A  T  + +R ++   G + + ++ V  YVE+GDLSGF
Sbjct:    1 MGKVVRDLYYRKAKEVGFRARSAFKLLQLDEEFGLFRNVQKAVDLCAAPGSWSQVLATRLYPDSAFTDDKGGERERVIAVDLQEMAPIPGVRQLQGDITSQATADTIIGHFEGQRVDLVVCDGAPDVTGLHDMDEFLQAQLIFGALAITTHVLASGGKFVAKVFRGRDLTLLAAQLRLFFESITVAKPASSRINSSECFVVCEGFQGPIPAHGYIPEMVTPTLGQGSRDQAAQTEKDAQRDEEEDSGENRALKIAVRCYVEQGDLSGF 268          
The following BLAST results are available for this feature:
BLAST of NO06G03270.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1
Match NameE-valueIdentityDescription
EWM26321.15.600e-10776.49cell division protein [Nannochloropsis gaditana][more]
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO06G03270NO06G03270Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO06G03270.1NO06G03270.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO06G03270.1.cds1NO06G03270.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO06G03270.1.cds2NO06G03270.1.cds2Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO06G03270.1 ID=NO06G03270.1|Name=NO06G03270.1|organism=Nannochloropsis oceanica|type=mRNA|length=3733bp
CCCTCCCTCCACCCCAAAAAATGCTGCATGAGATATCGGCGGTTCATTCC
CCCGCACTCACCCTCACAATCGGGCTGCCTGCGTCCCTCCCGTCAGCAAC
CTGGTCAATGTATGCCTGGGCTATCTTTACAGCTGATGCCTTCCCCACCT
CATTTGCCCCCGACCCCACCCAGAAAAATCCGTTTCGAAGATATCAAACA
CAAACACATCCTTATCGCTCTCCTCTTAATCCACCTGCGCAAAATTCACG
ATCTCCTCTACCTTCATCCTCCCCTTCGCATCGCTAACTTGGAACATCCT
TGGCTCCCGAGGGGCCACCTGCCCTCCCGTCCCTTTCTCTAGGCTTCCCA
AGCTCGTCCAAAACTCATACGGTTCCTCCCCCTCTTCCACCACCTCCATC
CCTCCCTCCTCCCCTTCCTCCATCCCCACCTCCACCTGCTGCGTCAACAT
GACCTCCCCCAGCACCACCGTTGCCTCCCTCTCTGCGGCTTTGCTCCATT
TAATCGTCCTGGGGCAAAGACAAAACAAAACAATCGCGCGAATTGAGATT
TTGGGGCGTTGTGGGCATTTGGACAGCGCATACATTCTCCAGCGTGGTCC
CCTTGACATGAAACAAGGCCGGTGCCAGCAGCAGCAATCGACGCAGTAGT
GGCAGAAGCCTTCCCTTTTTCCTCCATCTTGGACCCTTGTCGCTGTCTGG
CGCTACGAAAGCCGCTCTCCACGCTCCCTGTGTGCACGACCAACTGTCCC
TTAAACAATCGCCGAAAATGCGCGGGCTCCTTCCCTTAAACCACCCTCAC
TTGCACGGGAACCCTTCCCTGCATCCCGTCCAACCCGATGGCCAACAACG
CACACGCGCTCTATTCATCCACACTGCCTCCTGTGCCCTGCCACGTGTAG
GTTATCTGATTCTCCCTCGCCTCCTTTGAACATGTGTACAGAACCAAGTA
GGAATCGCTGCTGAAAAAGTGTCCGTGCTGAGAGGGAGGAACCTCGACCT
TTTCCTTTTTCTCCACACACCACACCTGCACCTTGCCTTTCCCGTTATCC
CCCTCTTTAATTCCATCTCCTTCTCCTGCTGCAGCTGCTGCTGCTGCTCC
TTTATCCAGCATGGCCTTGCTTCAGTCGACTGGATCGCCTTCCGTGGTGG
CGAGGGAGGAGGAAGGGCCACACCGCTGCTGGCGCTGCTGTTGATCCAGC
TGCTCCCCATGTCCATGGGCAAGGGGGCGTTCCACTCAGCAAAATAACTT
CGGAGGGAGGGAAGGAAGGAGGGAGGAAGGCAACAAATCCAAATTCGAAT
TTGAAAGCTTGTTACTTTCTATTTATTGGGAGCAGGGTACATCGAGGATG
ACGGGAATGTAGGGAGGAATCCGACGGACGGAGTAGCCGGCGGGGTCGGA
CATTAATATTAAAGCCCTTACCTGATATGTACCGCCATCTCCCCCCCTTT
CATCACCCGCTTCACGGGCATGTTAATATCGACCGATGGGATTTCTCCAG
GGAGGTGGTCGCCAAGCGTATCCCCCCCTCTTTTTCTTCGGCCGTCGTCC
CTTTCCCCACCCACACAGACACCCCACCTTAACGTCAACTCCCCACTCAT
CTCCGACACACGAACAAGCGATATCTTCTCACTCGCCGTCTCCTCAGCCA
CTATGTCAGCCCCTCCCTTTTTCGTCACAGGCTTCCTCTCCTCCCCAAAT
GCCGTCCCAAAATCCTTGTACTTGTTCTCATCATCCTTCTCCCATTCGTT
GACAAGGATCAAATCTGCACGTCCACTGAGTTCCATATCGCGGATGCGCA
AAATAAGCTCCAAAACCTTAGTCTTCTCGGCTCGATTCGCCTCGGGCACA
TGGTACAAATAGAGTTTAAGTCCCTTGTCCAACATAAAGCAATCGCCCAT
GTTCAGGCTGCTGTGCGCGAGAGGGACTTCCGTGGCATGCGCCATGCGAG
CGCCTTTGATGTGCAGCATGCGGATTGGCCAGACGTCGCGTTCCGCCTTT
CTTAAACCGCTCTTGACCCCCCCAGCCAGGTATCGGAGGTCACCCGTCGT
TTGAAATACGACATAAACACGGCCGACTCGTGCCCCTGTGTCTCACGGTA
CTGCACTGCGACCCCATCCAACGCATCATCGAGTTCCACTGCTGTGAAAG
CAGCCACTCCAATCTCGTCCTGGCTGCTTCGGAGCCCAACCAGAACAGGA
CCGAGTGTTGAAGGGCACTAGACTTTTTCTGTGTAGTAGCTAAGAATGTA
GGCATCGAAAAAGAGCCCCGTCACGGCCTCCTGCCTCACGGGCTTTAGGT
TCTCGATGCGCCATAGCTCGAGCCCCGGGGTGCTGCCAGAGACTCGGAAA
GCTGGGTCGACGGCGGGTAAGGCCACCATCGCTCGCTCATAACAATGCTT
TGGAAGTTGCCTGTGTTGCAGAGAAGTGGAGACGGTGAATGTTGTGAGTT
GGAGAGAACGAGCACACGATACGACCAGGTACCGGCACAGCACAGGCCCT
AGTACATTAATTGCCATCCCTCTGGTGATCAATAATGGCAAAACTTACAC
AGGAAGCCACGCCGACGACAAGCAGTAGAAACGCCGTCGAAAGCCGGAGG
GCGATGTCCGGAGGGCAATAGCTCGTGCGGGCCGTCCGAGACGTAGGCAA
GCTACCATACCTTTGCTTTTGTGCTTTGGTAAAGTCACGCGTCTGCTCAT
TGTCACAGTCAACAATAGAAAAATTTCCCACCCACCTACCCCCGCGACAC
CACAGGAGCCAAGCCCCCCATCCCCCCCGGCAGAGTAAAGTCAGCCAGCC
AAGGCCAAAGCGTCATGGGCAAGGTGGTGCGGGATCTGTATTACCGCAGG
GCCAAAGAAGTGGGCTTCCGCGCTCGCAGCGCCTTCAAGCTGCTGCAATT
GGACACAGAATTCAGCCTCTTTCAAGGCGTACAAAAGGCAGTGGACCTCT
GTGCGGCCCCAGGGAGTTGGAGTCAAGTGTTGGCCACACGGCTCTACCCG
AATAGCACGTTGGGAAAGGAGATCGAGGGGGAACGGGAGCGGATCGTTGC
CGTGGACTTGCAAGAGATGGCGCCGATTCCCGGCGTGCGGCAGCTGCAAG
GAGACATCACCTTGCAGATAACGGCCGACACTATCATCGGACACTTTGGC
GGGGAACGGGTGGACCTGGTGGTGTGTGACGGCGCCCCAGACGTGACGGG
CCTACACGATATGGACGAATTCCTTCAAGCCCAACTCATGTTTGCCGCAC
TCACCATCACTACACATGTTCTCAAAAATGGAGGCAAATTTGTCGCCAAG
GTTTTTAGAGGACGTGATCTGACCCTGCTGGCGGCGCAATTGCGTCTGTT
TTTTGAGAGTGTGACAGTTGCAAAACCAGCGAGTAGTCGCGCCAATTCAA
GTGAGTGTTTTGTGGTGTGTGAGGGGTTCTTGGGGCCGGTGCCTGAGCAT
GGCTACATCCCCCAGATGGTCGTGTCAACTTCTACTACCACCGCAACTAC
GACGGGGGGAGAGGAGAGGAGAGCACAAGATCCAGCGTATGGCGGAAGCG
CGTCGGGAAGGATGGTGGGGCCCTACGTGGAACGGGGGGATTTGTCGGGT
TTCGAGGTAGCAGCAGCCACCACGTCTTGACATTCGAATAGTGGGGGATA
TAGCATTTATTCCAAATGTGTATTTTAGAAGTAAGAAGGGTGGTGTACAA
ATAAATAGTAAACCAGAAATATCACTACTGACC
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protein sequence of NO06G03270.1

>NO06G03270.1-protein ID=NO06G03270.1-protein|Name=NO06G03270.1|organism=Nannochloropsis oceanica|type=polypeptide|length=272bp
MGKVVRDLYYRRAKEVGFRARSAFKLLQLDTEFSLFQGVQKAVDLCAAPG
SWSQVLATRLYPNSTLGKEIEGERERIVAVDLQEMAPIPGVRQLQGDITL
QITADTIIGHFGGERVDLVVCDGAPDVTGLHDMDEFLQAQLMFAALTITT
HVLKNGGKFVAKVFRGRDLTLLAAQLRLFFESVTVAKPASSRANSSECFV
VCEGFLGPVPEHGYIPQMVVSTSTTTATTTGGEERRAQDPAYGGSASGRM
VGPYVERGDLSGFEVAAATTS*
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mRNA from alignment at chr6:911888..915904-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO06G03270.1 ID=NO06G03270.1|Name=NO06G03270.1|organism=Nannochloropsis oceanica|type=mRNA|length=4017bp|location=Sequence derived from alignment at chr6:911888..915904- (Nannochloropsis oceanica)
CCCTCCCTCCACCCCAAAAAATGCTGCATGAGATATCGGCGGTTCATTCC CCCGCACTCACCCTCACAATCGGGCTGCCTGCGTCCCTCCCGTCAGCAAC CTGGTCAATGTATGCCTGGGCTATCTTTACAGCTGATGCCTTCCCCACCT CATTTGCCCCCGACCCCACCCAGAAAAATCCGTTTCGAAGATATCAAACA CAAACACATCCTTATCGCTCTCCTCTTAATCCACCTGCGCAAAATTCACG ATCTCCTCTACCTTCATCCTCCCCTTCGCATCGCTAACTTGGAACATCCT TGGCTCCCGAGGGGCCACCTGCCCTCCCGTCCCTTTCTCTAGGCTTCCCA AGCTCGTCCAAAACTCATACGGTTCCTCCCCCTCTTCCACCACCTCCATC CCTCCCTCCTCCCCTTCCTCCATCCCCACCTCCACCTGCTGCGTCAACAT GACCTCCCCCAGCACCACCGTTGCCTCCCTCTCTGCGGCTTTGCTCCATT TAATCGTCCTGGGGCAAAGACAAAACAAAACAATCGCGCGAATTGAGATT TTGGGGCGTTGTGGGCATTTGGACAGCGCATACATTCTCCAGCGTGGTCC CCTTGACATGAAACAAGGCCGGTGCCAGCAGCAGCAATCGACGCAGTAGT GGCAGAAGCCTTCCCTTTTTCCTCCATCTTGGACCCTTGTCGCTGTCTGG CGCTACGAAAGCCGCTCTCCACGCTCCCTGTGTGCACGACCAACTGTCCC TTAAACAATCGCCGAAAATGCGCGGGCTCCTTCCCTTAAACCACCCTCAC TTGCACGGGAACCCTTCCCTGCATCCCGTCCAACCCGATGGCCAACAACG CACACGCGCTCTATTCATCCACACTGCCTCCTGTGCCCTGCCACGTGTAG GTTATCTGATTCTCCCTCGCCTCCTTTGAACATGTGTACAGAACCAAGTA GGAATCGCTGCTGAAAAAGTGTCCGTGCTGAGAGGGAGGAACCTCGACCT TTTCCTTTTTCTCCACACACCACACCTGCACCTTGCCTTTCCCGTTATCC CCCTCTTTAATTCCATCTCCTTCTCCTGCTGCAGCTGCTGCTGCTGCTCC TTTATCCAGCATGGCCTTGCTTCAGTCGACTGGATCGCCTTCCGTGGTGG CGAGGGAGGAGGAAGGGCCACACCGCTGCTGGCGCTGCTGTTGATCCAGC TGCTCCCCATGTCCATGGGCAAGGGGGCGTTCCACTCAGCAAAATAACTT CGGAGGGAGGGAAGGAAGGAGGGAGGAAGGCAACAAATCCAAATTCGAAT TTGAAAGCTTGTTACTTTCTATTTATTGGGAGCAGGGTACATCGAGGATG ACGGGAATGTAGGGAGGAATCCGACGGACGGAGTAGCCGGCGGGGTCGGA CATTAATATTAAAGCCCTTACCTGATATGTACCGCCATCTCCCCCCCTTT CATCACCCGCTTCACGGGCATGTTAATATCGACCGATGGGATTTCTCCAG GGAGGTGGTCGCCAAGCGTATCCCCCCCTCTTTTTCTTCGGCCGTCGTCC CTTTCCCCACCCACACAGACACCCCACCTTAACGTCAACTCCCCACTCAT CTCCGACACACGAACAAGCGATATCTTCTCACTCGCCGTCTCCTCAGCCA CTATGTCAGCCCCTCCCTTTTTCGTCACAGGCTTCCTCTCCTCCCCAAAT GCCGTCCCAAAATCCTTGTACTTGTTCTCATCATCCTTCTCCCATTCGTT GACAAGGATCAAATCTGCACGTCCACTGAGTTCCATATCGCGGATGCGCA AAATAAGCTCCAAAACCTTAGTCTTCTCGGCTCGATTCGCCTCGGGCACA TGGTACAAATAGAGTTTAAGTCCCTTGTCCAACATAAAGCAATCGCCCAT GTTCAGGCTGCTGTGCGCGAGAGGGACTTCCGTGGCATGCGCCATGCGAG CGCCTTTGATGTGCAGCATGCGGATTGGCCAGACGTCGCGTTCCGCCTTT CTTAAACCGCTCTTGACCCCCCCAGCCAGGTATCGGAGGTCACCCGTCGT TTGAAATACGACATAAACACGGCCGACTCGTGCCCCTGTGTCTCACGGTA CTGCACTGCGACCCCATCCAACGCATCATCGAGTTCCACTGCTGTGAAAG CAGCCACTCCAATCTCGTCCTGGCTGCTTCGGAGCCCAACCAGAACAGGA CCGAGTGTTGAAGGGCACTAGACTTTTTCTGTGTAGTAGCTAAGAATGTA GGCATCGAAAAAGAGCCCCGTCACGGCCTCCTGCCTCACGGGCTTTAGGT TCTCGATGCGCCATAGCTCGAGCCCCGGGGTGCTGCCAGAGACTCGGAAA GCTGGGTCGACGGCGGGTAAGGCCACCATCGCTCGCTCATAACAATGCTT TGGAAGTTGCCTGTGTTGCAGAGAAGTGGAGACGGTGAATGTTGTGAGTT GGAGAGAACGAGCACACGATACGACCAGGTACCGGCACAGCACAGGCCCT AGTACATTAATTGCCATCCCTCTGGTGATCAATAATGGCAAAACTTACAC AGGAAGCCACGCCGACGACAAGCAGTAGAAACGCCGTCGAAAGCCGGAGG GCGATGTCCGGAGGGCAATAGCTCGTGCGGGCCGTCCGAGACGTAGGCAA GCTACCATACCTTTGCTTTTGTGCTTTGGTAAAGTCACGCGTCTGCTCAT TGTCACAGTCAACAATAGAAAAATTTCCCACCCACCTACCCCCGCGACAC CACAGGAGCCAAGCCCCCCATCCCCCCCGGCAGAGTAAAGTCAGCCAGCC AAGGCCAAAGCGTCATGGGCAAGGTGGTGCGGGATCTGTATTACCGCAGG GCCAAAGAAGTGGGCTTCCGCGCTCGCAGCGCCTTCAAGCTGCTGCAATT GGACACAGAATTCAGCCTCTTTCAAGGCGTACAAAAGGCAGTGGACCTCT GTGCGGCCCCAGGGAGTTGGAGTCAAGTGTTGGCCACACGGCTCTACCCG AATAGCACGTTGGGAAAGGAGATCGAGGGGGAACGGGAGCGGATCGTTGC CGTGGACTTGCAAGAGATGGCGCCGATTCCCGGCGTGCGGCAGCTGCAAG GAGACATCACCTTGCAGGTGAGGGAGAGGGGAGGAAAGTGCGCTCGGTGT GGAGGTAGGCAAATGAAGGGGGAAGAGGTAGAGAGAGGGCCCGGCTCTGG CACTATATTAGCATTTGCACGATATTGTTTTGAATGAATTAATTTGCGCA TGGAATAGCAAGGCTAGAGGAGTGGAGGGGGCGAGAAAGCGCTGTTGGAT GCGGTGTACGTGTCGTGAATGAACCCACCTCCTCTACGCATCAATCCCTT AATAATGTTTTCCTTCCTTTTTTCTCACTCCTCTCCGACACCACCATATA GATAACGGCCGACACTATCATCGGACACTTTGGCGGGGAACGGGTGGACC TGGTGGTGTGTGACGGCGCCCCAGACGTGACGGGCCTACACGATATGGAC GAATTCCTTCAAGCCCAACTCATGTTTGCCGCACTCACCATCACTACACA TGTTCTCAAAAATGGAGGCAAATTTGTCGCCAAGGTTTTTAGAGGACGTG ATCTGACCCTGCTGGCGGCGCAATTGCGTCTGTTTTTTGAGAGTGTGACA GTTGCAAAACCAGCGAGTAGTCGCGCCAATTCAAGTGAGTGTTTTGTGGT GTGTGAGGGGTTCTTGGGGCCGGTGCCTGAGCATGGCTACATCCCCCAGA TGGTCGTGTCAACTTCTACTACCACCGCAACTACGACGGGGGGAGAGGAG AGGAGAGCACAAGATCCAGCGTATGGCGGAAGCGCGTCGGGAAGGATGGT GGGGCCCTACGTGGAACGGGGGGATTTGTCGGGTTTCGAGGTAGCAGCAG CCACCACGTCTTGACATTCGAATAGTGGGGGATATAGCATTTATTCCAAA TGTGTATTTTAGAAGTAAGAAGGGTGGTGTACAAATAAATAGTAAACCAG AAATATCACTACTGACC
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Coding sequence (CDS) from alignment at chr6:911888..915904-

>NO06G03270.1 ID=NO06G03270.1|Name=NO06G03270.1|organism=Nannochloropsis oceanica|type=CDS|length=816bp|location=Sequence derived from alignment at chr6:911888..915904- (Nannochloropsis oceanica)
ATGGGCAAGGTGGTGCGGGATCTGTATTACCGCAGGGCCAAAGAAGTGGG
CTTCCGCGCTCGCAGCGCCTTCAAGCTGCTGCAATTGGACACAGAATTCA
GCCTCTTTCAAGGCGTACAAAAGGCAGTGGACCTCTGTGCGGCCCCAGGG
AGTTGGAGTCAAGTGTTGGCCACACGGCTCTACCCGAATAGCACGTTGGG
AAAGGAGATCGAGGGGGAACGGGAGCGGATCGTTGCCGTGGACTTGCAAG
AGATGGCGCCGATTCCCGGCGTGCGGCAGCTGCAAGGAGACATCACCTTG
CAGATAACGGCCGACACTATCATCGGACACTTTGGCGGGGAACGGGTGGA
CCTGGTGGTGTGTGACGGCGCCCCAGACGTGACGGGCCTACACGATATGG
ACGAATTCCTTCAAGCCCAACTCATGTTTGCCGCACTCACCATCACTACA
CATGTTCTCAAAAATGGAGGCAAATTTGTCGCCAAGGTTTTTAGAGGACG
TGATCTGACCCTGCTGGCGGCGCAATTGCGTCTGTTTTTTGAGAGTGTGA
CAGTTGCAAAACCAGCGAGTAGTCGCGCCAATTCAAGTGAGTGTTTTGTG
GTGTGTGAGGGGTTCTTGGGGCCGGTGCCTGAGCATGGCTACATCCCCCA
GATGGTCGTGTCAACTTCTACTACCACCGCAACTACGACGGGGGGAGAGG
AGAGGAGAGCACAAGATCCAGCGTATGGCGGAAGCGCGTCGGGAAGGATG
GTGGGGCCCTACGTGGAACGGGGGGATTTGTCGGGTTTCGAGGTAGCAGC
AGCCACCACGTCTTGA
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Synonyms
Publications