NO06G02730.1, NO06G02730.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO06G02730.1
Unique Name	NO06G02730.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	4293
Alignment location	chr6:770059..774423 +

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr6	genome	chr6:770059..774423 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO06G02730.1 vs.
Match: EWM26292.1 (indoleamine -dioxygenase subfamily [Nannochloropsis gaditana])

HSP 1 Score: 459.9 bits (1182), Expect = 1.200e-125
Identity = 290/587 (49.40%), Postives = 374/587 (63.71%), Query Frame = 0

Query:   34 PPPPCST-ISAFLRSFDIDPVHGFLPSSWPLPRLPYLAFQAHEDLAAVLPQLLVSSTARAAIEALPLVKSTSTRNLFNNNEPAQRRALLLFGGLASAYVWGGGTDVTPRDYLPACIAVPLYEVARMLETCPILSHQSNCLYNWKKGASEK-AKEK------------GGNVNR--MHNGDED-------ACSDSDNPSNPLQAQNLALTFSFTGDDNERMFYLLSLEIEVVGARALPLLETARRAAHHLLKASFPCSWKGDEGEENGMKTEQHQQQQQQQHQQEVYLQQESREVEEKAIIDTLIQVRACIRACQSILLSMPRHVDPVFFFHRIRPYLSGWRNNPSVPQGIIYRGVVVGE-----GEGGGEVGGGRGQGRGRGREDAGQSSNENEHQQEGDNYSEQELDERGPRLSYSGGSAAQSSLLPSLDLYLGVNHDEAGTRSQSSYQFVKAMRAYMPKGHRRFLEALEEDVKIEDEEEGREKRMSIRRYVLWRCEECEGGKEERKEDGLRLVRAYDGCVEALVAFRMSHLGIVRLYITHQQGGKGGRKTGGGGLEEAAGGKGTGGQAPKEFLKPLRDQTAAALL 593
            P   CS  I  +L +F ID +HGFLPS  PL RLP   FQ+HE++AA L +LL S+ ARA IE LP+V +  TR+L N + P+QRRALLL  GLASAYVWGGG DV+PR+YLP  IAVPLYEV+ MLETCPILSHQSNCLYNWK  A EK A+E             G   N   +H G++        AC  + + +  L+ + L+LTFSFT D+NERMFYLL+LEIE +GAR LPLLE  RR A  L  +S           E+G + ++ Q ++ Q       +        +KA++  L +V+  I+ CQ +LLSMPR VDP FF+HR+RPYLSGWRNNP++P+G++YRGVV  +     G  G E  G +  G+ RG E +G  + ++    E         D  GP L  SG SAAQSSL+P++D+YLGV+H+ AG+ SQ+SY+++KAMRAYMPKGHRRFL+ LE+D+      EG     SIR Y+     + E      +ED   +  AY+GCV AL+AFR SHLGIV LYI+ QQ G+G +  G  GL  AAGGKGTGGQ P+EFL PL+  TAA+ L
Sbjct:    2 PDSGCSCCIFEYLGAFGIDTLHGFLPSHEPLSRLPQEEFQSHENVAANLAELLNSTIARAKIEVLPVVSAQDTRSLLNEDPPSQRRALLLLSGLASAYVWGGGADVSPRNYLPPAIAVPLYEVSCMLETCPILSHQSNCLYNWKYSALEKEARESSCRSQYPGESLCGDESNEWILHAGEDTDRLAPCPACYSTMSTTPFLRTKELSLTFSFTEDENERMFYLLTLEIENIGARTLPLLEYTRRIAQKLTSSS-----------ESGAQRDECQHEEGQGRACSHVI------ASDKAMVAALKEVKRLIQLCQQVLLSMPRFVDPGFFYHRVRPYLSGWRNNPALPEGVMYRGVVPLKDRFLVGGAGTETSGSQTHGK-RGEETSGYGAWDDPFPDELAEAKNNAGDSSGPTLFLSGASAAQSSLIPAIDVYLGVDHNAAGSPSQASYEYLKAMRAYMPKGHRRFLDTLEKDL---TSCEG-TPIASIREYIQRYGSDRETMNGPEREDRKEVREAYNGCVGALLAFRKSHLGIVHLYISSQQ-GQGEKGVGTAGLGGAAGGKGTGGQPPREFLMPLQQWTAASRL 565

The following BLAST results are available for this feature:

BLAST of NO06G02730.1 vs.

BLAST of NO06G02730.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
EWM26292.1	1.200e-125	49.40	indoleamine -dioxygenase subfamily [Nannochloropsi...	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO06G02730	NO06G02730	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO06G02730.1	NO06G02730.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO06G02730.1.cds1	NO06G02730.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO06G02730.1.cds2	NO06G02730.1.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr6:770059..774423+
coding sequence from alignment at chr6:770059..774423+

mRNA sequence

>NO06G02730.1 ID=NO06G02730.1|Name=NO06G02730.1|organism=Nannochloropsis oceanica|type=mRNA|length=4293bp
TGTGAGTGTTGGTCTGTGATAATATTCTTCTCCTCTTGGCAGTGTCCTTG
CTTTACCGATCCAATCCTTTCTCTCTCTTCTCTTTCTTAGCTTTCCCATT
CATGTTCTTAAGCCAACTCCTTCCTTCCCTGATTGGAACAATACCATCCC
CTCTTTTCCCCACCTCTCCTTTAAACCTTGCCTAGAGCACACAAACTCAC
ATACATCCCAAAATGCAAAGGCTACAATTGAAATAAAAACTACACGATTA
TGTAGCAAGGACGACGATCCGAGCGCATCAATTACCGTTCCTTGTTCCCC
CTCTACTCCCTCCCACTCTATATATCTCTGTCTGACGTCAGACAAGAAAA
CACAAAGTGCACCAAGCACCGAGACGACCAGCGCCTATTCCTACTTAACC
TTCCTCCCTTTCCCCCATCCTTCTCATCTAATACTCATTCTACTTCCCCT
CTTGCGCCTTCCTCTTCGCCCCCTGCAGCGTATTCCTCAATAGCATCGCA
ATCGTCATCGGGCCAACACCCCCGGGCACCGGGGTTATCTTTCCCGCCAC
CGTCTTACAGCCTTCAAAATCAACGTCCCCCACCAATTTATACCCCCTCT
TGCTCGTCGGATCATCAACACTGTTGATTCCCACATCAATCACCACCGCC
CCCGGCTTCACAAAGTCGGCCTTGACCATCTCCGCCCGCCCAACGGCTGC
CACGATGATATCCGCGCGTTTGCAAACCGCCGCCGCGTCCTTTGTTCGCG
AGTGCACGATCGTCACGGTTGCATTCTTTTGCATCAGAAGGAGAGAGACG
GGGATCCCAACAATGTTACTCCTCCCAATGACTACGGCTTCTTTGCCTTC
AATCACCATCCCGGACCTCTCGATCAGCTCAATACACCCTTGGGGCGTGC
AGGCCGCGTGGAAAGGCAACGCCTTTAAGTCAAATTTCCCCTTGGATCCA
TGCGTATTGGTATGCGCCAGCTTGGCCAGATTCAAAGGGTGGAGACCATC
GACGTCCTTGTCAGGCAGGATTGTGTCCAAGACCTTCTGCTCATGAATGT
GAGGAGGAATGGGCAGCTGTACCAAAATACCATGCACGGCTGGGTCAGCA
TTCAATTCTTCAACTTTGGCGATCAAATCTGCCTCGGTCACATCTTCGGG
GAACTCGAATTTGAACGAATTGATCCCCACCTCCTCACAAGCCTTGATCT
TCATTCGGACGTAGGTCGCGGAGTCCGTACGGTTCCCCACAAGCACAACA
GCCAAGCCGGGCTTCACGTCCGAAGATGCCAATAGGGCGGTGCACTCGTC
CTTAATCTCTCCTCGGATCACCTCTGCGATTGCCTTGCCGTCGATGATAT
TGTCGGAAGAAGGGGTAGCCATGGTGAAAAGTAATTCGATGTCAAAGGGC
CTACGGGGCGTTGAGTCCTCTTCGCGATAAAGAGGGATACTTGAAGGGTT
GTTAGATGTTGTAAAAGACCGATATCTGCGAGACGGTCTACGTCGACTGA
GATGAGGCGCGAAGACGAAGGCAGTGGCAACGGCTGAGGCTGTAGAGGGG
GCGAGCGTCCAGCGAGAGATAGCACTGGCGGCGACGAAAGACGGCACGCG
GCTGAGTAGCAACAACACGGTTGGAAGGTAGAGGAAAGGGCGCAGGATTG
GCTGCGGCAGGATTCCTCGTTGCAGGGAGGGTCGGCGAAAGACGACGGAG
ATTGTGATAGATAGCCTACGTGTTGTGGGAAGGCGAGGAGAGGGTGGGTG
ACGGGTGATGGTCGGAGAAAGATCAGAAGTGAGATTGCAGATTTGTGTTG
GTGAGGTGATAGCGCGGCGCCGCCTGGCCGTGAAGGCAGGGCACAAACAC
AATTTGGCGGCGACAGTGCGCAAGCGTGTGGAGGCATGGACTGAGTGGGG
GGATGGGATTGAGGGGGTGAGCTTGCTGATGGTGAGAGTGCAAGGGCAGG
GGGTACAGGAGGTCGGGCTTGGACACGACCAACAAGCCTATGCGGTGGAG
CGCGTGAGTGCACACATACGGCCGTGCAAGTTGCTTAGAGCCATTGCGGG
AGCATACGCTAAGGATGGTCAGTGTCCTTGTGCTTTTTGCTTGTATTGTT
TTTTTCTGCGTTGTGTCTTTGCATGATTTGCAATTTTCTTCTTCAGGCTC
CTTTTCTCCACTTTCCCTATGCGTGCGCGGGCACTCACGATCAGTCAAAG
AGGCAAGAACCGAGCACCCTGATCGATCAGGTTAAATCCCAAAGAGGAGA
TCGTACAAATGGTGTGTAAGATGTTGAGGGTGCAGGCATGACCCTCGTTA
CAAGCGGGCTTCCTGTATCGCTGAATTGAACCGCGCCCGCGGCACGCACG
TCTCACAAAAATGCACGCATGGACATGGCAACACCAAGAGAGGCAAGATT
TCCAATGCTTCCTTGTCTTAAGTCATCCTCTAGCCGTTGCATGCCTCCAC
ACTCCCCACCTCGATCCCCACCTCCGCCGTGCTCAACCATCTCCGCATTT
CTTCGTTCCTTCGATATCGATCCCGTCCACGGCTTTTTGCCATCCTCATG
GCCTCTGCCTCGCCTCCCTTACCTAGCCTTTCAGGCGCATGAAGACCTGG
CCGCGGTCTTGCCTCAGCTCCTAGTCTCTTCCACAGCTCGCGCCGCCATC
GAGGCCCTCCCTTTAGTAAAGTCGACTTCCACACGAAACCTCTTCAACAA
CAATGAGCCTGCACAACGCCGAGCATTGCTACTTTTTGGTGGACTTGCCT
CGGCGTACGTCTGGGGTGGTGGCACCGACGTGACCCCACGTGATTACCTG
CCTGCTTGCATCGCCGTACCTTTGTACGAGGTGGCGCGTATGTTGGAGAC
TTGCCCAATATTGAGCCATCAAAGCAACTGTTTGTATAACTGGAAGAAAG
GAGCCTCTGAAAAGGCGAAGGAGAAGGGGGGAAATGTGAACCGCATGCAC
AATGGCGACGAGGATGCTTGCAGTGACAGCGACAACCCTTCAAATCCGCT
ACAAGCCCAAAACTTGGCATTGACCTTCTCATTTACGGGTGACGACAACG
AACGGATGTTTTATCTGCTCAGTCTTGAAATTGAGGTGGTAGGTGCTCGT
GCGTTACCCTTATTGGAGACGGCCCGTCGTGCCGCCCATCATCTGCTTAA
AGCTTCTTTTCCTTGTTCATGGAAGGGGGATGAGGGGGAAGAAAATGGGA
TGAAAACAGAGCAGCATCAACAGCAGCAGCAGCAGCAGCATCAACAAGAA
GTGTACCTGCAGCAGGAATCGCGAGAAGTAGAGGAAAAGGCCATCATCGA
CACCTTAATTCAGGTCCGTGCCTGTATCAGGGCATGCCAATCAATCCTTC
TTTCCATGCCTCGTCATGTGGACCCGGTATTCTTTTTCCATCGGATCCGA
CCTTATTTGTCAGGATGGAGAAATAATCCGAGCGTGCCTCAAGGGATAAT
ATATCGAGGTGTGGTGGTGGGAGAGGGAGAGGGAGGAGGAGAGGTAGGTG
GAGGACGAGGACAGGGACGAGGACGCGGACGAGAAGATGCCGGTCAAAGC
AGTAATGAGAACGAGCATCAGCAAGAGGGAGACAATTATTCCGAACAAGA
ATTAGACGAAAGAGGTCCTCGCCTCTCTTACTCCGGGGGTTCCGCTGCGC
AAAGCTCCCTCCTTCCATCCCTTGACCTCTACCTTGGCGTGAATCACGAT
GAGGCGGGCACGCGTAGTCAGTCCTCCTATCAATTCGTCAAAGCCATGCG
GGCTTACATGCCGAAGGGACATCGTCGCTTCCTCGAGGCGCTGGAAGAAG
ATGTCAAGATTGAGGATGAGGAGGAAGGAAGGGAGAAAAGGATGAGCATT
CGAAGGTATGTATTGTGGAGATGTGAAGAATGTGAGGGTGGGAAGGAGGA
GCGGAAGGAGGATGGGCTGCGGTTAGTGAGGGCGTATGACGGATGTGTAG
AAGCCTTGGTAGCTTTTCGCATGTCACATTTAGGGATTGTTCGTCTATAT
ATCACGCATCAGCAAGGAGGGAAGGGGGGAAGGAAGACGGGTGGAGGAGG
GTTGGAGGAAGCGGCGGGGGGCAAGGGCACGGGAGGGCAGGCCCCGAAAG
AGTTTCTTAAACCGTTGCGGGATCAGACAGCAGCAGCGCTGCTGGAGGGA
AAGGTAAAAGGGGTGTAACATAGAACAGGTGAAGAGAGATAGAGAGAGAA
AGCGAACACATGTCTGAAAACTGTGAGAGAAAAATTAACGTGTCTATATA
TTTATGCATAATTCAAGGAACCAGAAAAAAAATATAGAAAAGT

protein sequence of NO06G02730.1

>NO06G02730.1-protein ID=NO06G02730.1-protein|Name=NO06G02730.1|organism=Nannochloropsis oceanica|type=polypeptide|length=600bp
MDMATPREARFPMLPCLKSSSSRCMPPHSPPRSPPPPCSTISAFLRSFDI
DPVHGFLPSSWPLPRLPYLAFQAHEDLAAVLPQLLVSSTARAAIEALPLV
KSTSTRNLFNNNEPAQRRALLLFGGLASAYVWGGGTDVTPRDYLPACIAV
PLYEVARMLETCPILSHQSNCLYNWKKGASEKAKEKGGNVNRMHNGDEDA
CSDSDNPSNPLQAQNLALTFSFTGDDNERMFYLLSLEIEVVGARALPLLE
TARRAAHHLLKASFPCSWKGDEGEENGMKTEQHQQQQQQQHQQEVYLQQE
SREVEEKAIIDTLIQVRACIRACQSILLSMPRHVDPVFFFHRIRPYLSGW
RNNPSVPQGIIYRGVVVGEGEGGGEVGGGRGQGRGRGREDAGQSSNENEH
QQEGDNYSEQELDERGPRLSYSGGSAAQSSLLPSLDLYLGVNHDEAGTRS
QSSYQFVKAMRAYMPKGHRRFLEALEEDVKIEDEEEGREKRMSIRRYVLW
RCEECEGGKEERKEDGLRLVRAYDGCVEALVAFRMSHLGIVRLYITHQQG
GKGGRKTGGGGLEEAAGGKGTGGQAPKEFLKPLRDQTAAALLEGKVKGV*

mRNA from alignment at chr6:770059..774423+

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO06G02730.1 ID=NO06G02730.1|Name=NO06G02730.1|organism=Nannochloropsis oceanica|type=mRNA|length=4365bp|location=Sequence derived from alignment at chr6:770059..774423+ (Nannochloropsis oceanica)
TGTGAGTGTTGGTCTGTGATAATATTCTTCTCCTCTTGGCAGTGTCCTTG
CTTTACCGATCCAATCCTTTCTCTCTCTTCTCTTTCTTAGCTTTCCCATT
CATGTTCTTAAGCCAACTCCTTCCTTCCCTGATTGGAACAATACCATCCC
CTCTTTTCCCCACCTCTCCTTTAAACCTTGCCTAGAGCACACAAACTCAC
ATACATCCCAAAATGCAAAGGCTACAATTGAAATAAAAACTACACGATTA
TGTAGCAAGGACGACGATCCGAGCGCATCAATTACCGTTCCTTGTTCCCC
CTCTACTCCCTCCCACTCTATATATCTCTGTCTGACGTCAGACAAGAAAA
CACAAAGTGCACCAAGCACCGAGACGACCAGCGCCTATTCCTACTTAACC
TTCCTCCCTTTCCCCCATCCTTCTCATCTAATACTCATTCTACTTCCCCT
CTTGCGCCTTCCTCTTCGCCCCCTGCAGCGTATTCCTCAATAGCATCGCA
ATCGTCATCGGGCCAACACCCCCGGGCACCGGGGTTATCTTTCCCGCCAC
CGTCTTACAGCCTTCAAAATCAACGTCCCCCACCAATTTATACCCCCTCT
TGCTCGTCGGATCATCAACACTGTTGATTCCCACATCAATCACCACCGCC
CCCGGCTTCACAAAGTCGGCCTTGACCATCTCCGCCCGCCCAACGGCTGC
CACGATGATATCCGCGCGTTTGCAAACCGCCGCCGCGTCCTTTGTTCGCG
AGTGCACGATCGTCACGGTTGCATTCTTTTGCATCAGAAGGAGAGAGACG
GGGATCCCAACAATGTTACTCCTCCCAATGACTACGGCTTCTTTGCCTTC
AATCACCATCCCGGACCTCTCGATCAGCTCAATACACCCTTGGGGCGTGC
AGGCCGCGTGGAAAGGCAACGCCTTTAAGTCAAATTTCCCCTTGGATCCA
TGCGTATTGGTATGCGCCAGCTTGGCCAGATTCAAAGGGTGGAGACCATC
GACGTCCTTGTCAGGCAGGATTGTGTCCAAGACCTTCTGCTCATGAATGT
GAGGAGGAATGGGCAGCTGTACCAAAATACCATGCACGGCTGGGTCAGCA
TTCAATTCTTCAACTTTGGCGATCAAATCTGCCTCGGTCACATCTTCGGG
GAACTCGAATTTGAACGAATTGATCCCCACCTCCTCACAAGCCTTGATCT
TCATTCGGACGTAGGTCGCGGAGTCCGTACGGTTCCCCACAAGCACAACA
GCCAAGCCGGGCTTCACGTCCGAAGATGCCAATAGGGCGGTGCACTCGTC
CTTAATCTCTCCTCGGATCACCTCTGCGATTGCCTTGCCGTCGATGATAT
TGTCGGAAGAAGGGGTAGCCATGGTGAAAAGTAATTCGATGTCAAAGGGC
CTACGGGGCGTTGAGTCCTCTTCGCGATAAAGAGGGATACTTGAAGGGTT
GTTAGATGTTGTAAAAGACCGATATCTGCGAGACGGTCTACGTCGACTGA
GATGAGGCGCGAAGACGAAGGCAGTGGCAACGGCTGAGGCTGTAGAGGGG
GCGAGCGTCCAGCGAGAGATAGCACTGGCGGCGACGAAAGACGGCACGCG
GCTGAGTAGCAACAACACGGTTGGAAGGTAGAGGAAAGGGCGCAGGATTG
GCTGCGGCAGGATTCCTCGTTGCAGGGAGGGTCGGCGAAAGACGACGGAG
ATTGTGATAGATAGCCTACGTGTTGTGGGAAGGCGAGGAGAGGGTGGGTG
ACGGGTGATGGTCGGAGAAAGATCAGAAGTGAGATTGCAGATTTGTGTTG
GTGAGGTGATAGCGCGGCGCCGCCTGGCCGTGAAGGCAGGGCACAAACAC
AATTTGGCGGCGACAGTGCGCAAGCGTGTGGAGGCATGGACTGAGTGGGG
GGATGGGATTGAGGGGGTGAGCTTGCTGATGGTGAGAGTGCAAGGGCAGG
GGGTACAGGAGGTCGGGCTTGGACACGACCAACAAGCCTATGCGGTGGAG
CGCGTGAGTGCACACATACGGCCGTGCAAGTTGCTTAGAGCCATTGCGGG
AGCATACGCTAAGGATGGTCAGTGTCCTTGTGCTTTTTGCTTGTATTGTT
TTTTTCTGCGTTGTGTCTTTGCATGATTTGCAATTTTCTTCTTCAGGCTC
CTTTTCTCCACTTTCCCTATGCGTGCGCGGGCACTCACGATCAGTCAAAG
AGGCAAGAACCGAGCACCCTGATCGATCAGGTTAAATCCCAAAGAGGAGA
TCGTACAAATGGTGTGTAAGATGTTGAGGGTGCAGGCATGACCCTCGTTA
CAAGCGGGCTTCCTGTATCGCTGAATTGAACCGCGCCCGCGGCACGCACG
TCTCACAAAAATGCACGCATGGACATGGCAACACCAAGAGAGGCAAGATT
TCCAATGCTTCCTTGTCTTAAGTCATCCTCTGTAAGTAATCATGGCTTCC
GTCTTCTGATTTTCCGCCTCTCACTCACCTCCTTCCATACCCCATATCCA
CAGAGCCGTTGCATGCCTCCACACTCCCCACCTCGATCCCCACCTCCGCC
GTGCTCAACCATCTCCGCATTTCTTCGTTCCTTCGATATCGATCCCGTCC
ACGGCTTTTTGCCATCCTCATGGCCTCTGCCTCGCCTCCCTTACCTAGCC
TTTCAGGCGCATGAAGACCTGGCCGCGGTCTTGCCTCAGCTCCTAGTCTC
TTCCACAGCTCGCGCCGCCATCGAGGCCCTCCCTTTAGTAAAGTCGACTT
CCACACGAAACCTCTTCAACAACAATGAGCCTGCACAACGCCGAGCATTG
CTACTTTTTGGTGGACTTGCCTCGGCGTACGTCTGGGGTGGTGGCACCGA
CGTGACCCCACGTGATTACCTGCCTGCTTGCATCGCCGTACCTTTGTACG
AGGTGGCGCGTATGTTGGAGACTTGCCCAATATTGAGCCATCAAAGCAAC
TGTTTGTATAACTGGAAGAAAGGAGCCTCTGAAAAGGCGAAGGAGAAGGG
GGGAAATGTGAACCGCATGCACAATGGCGACGAGGATGCTTGCAGTGACA
GCGACAACCCTTCAAATCCGCTACAAGCCCAAAACTTGGCATTGACCTTC
TCATTTACGGGTGACGACAACGAACGGATGTTTTATCTGCTCAGTCTTGA
AATTGAGGTGGTAGGTGCTCGTGCGTTACCCTTATTGGAGACGGCCCGTC
GTGCCGCCCATCATCTGCTTAAAGCTTCTTTTCCTTGTTCATGGAAGGGG
GATGAGGGGGAAGAAAATGGGATGAAAACAGAGCAGCATCAACAGCAGCA
GCAGCAGCAGCATCAACAAGAAGTGTACCTGCAGCAGGAATCGCGAGAAG
TAGAGGAAAAGGCCATCATCGACACCTTAATTCAGGTCCGTGCCTGTATC
AGGGCATGCCAATCAATCCTTCTTTCCATGCCTCGTCATGTGGACCCGGT
ATTCTTTTTCCATCGGATCCGACCTTATTTGTCAGGATGGAGAAATAATC
CGAGCGTGCCTCAAGGGATAATATATCGAGGTGTGGTGGTGGGAGAGGGA
GAGGGAGGAGGAGAGGTAGGTGGAGGACGAGGACAGGGACGAGGACGCGG
ACGAGAAGATGCCGGTCAAAGCAGTAATGAGAACGAGCATCAGCAAGAGG
GAGACAATTATTCCGAACAAGAATTAGACGAAAGAGGTCCTCGCCTCTCT
TACTCCGGGGGTTCCGCTGCGCAAAGCTCCCTCCTTCCATCCCTTGACCT
CTACCTTGGCGTGAATCACGATGAGGCGGGCACGCGTAGTCAGTCCTCCT
ATCAATTCGTCAAAGCCATGCGGGCTTACATGCCGAAGGGACATCGTCGC
TTCCTCGAGGCGCTGGAAGAAGATGTCAAGATTGAGGATGAGGAGGAAGG
AAGGGAGAAAAGGATGAGCATTCGAAGGTATGTATTGTGGAGATGTGAAG
AATGTGAGGGTGGGAAGGAGGAGCGGAAGGAGGATGGGCTGCGGTTAGTG
AGGGCGTATGACGGATGTGTAGAAGCCTTGGTAGCTTTTCGCATGTCACA
TTTAGGGATTGTTCGTCTATATATCACGCATCAGCAAGGAGGGAAGGGGG
GAAGGAAGACGGGTGGAGGAGGGTTGGAGGAAGCGGCGGGGGGCAAGGGC
ACGGGAGGGCAGGCCCCGAAAGAGTTTCTTAAACCGTTGCGGGATCAGAC
AGCAGCAGCGCTGCTGGAGGGAAAGGTAAAAGGGGTGTAACATAGAACAG
GTGAAGAGAGATAGAGAGAGAAAGCGAACACATGTCTGAAAACTGTGAGA
GAAAAATTAACGTGTCTATATATTTATGCATAATTCAAGGAACCAGAAAA
AAAATATAGAAAAGT

Coding sequence (CDS) from alignment at chr6:770059..774423+

>NO06G02730.1 ID=NO06G02730.1|Name=NO06G02730.1|organism=Nannochloropsis oceanica|type=CDS|length=1800bp|location=Sequence derived from alignment at chr6:770059..774423+ (Nannochloropsis oceanica)
ATGGACATGGCAACACCAAGAGAGGCAAGATTTCCAATGCTTCCTTGTCT
TAAGTCATCCTCTAGCCGTTGCATGCCTCCACACTCCCCACCTCGATCCC
CACCTCCGCCGTGCTCAACCATCTCCGCATTTCTTCGTTCCTTCGATATC
GATCCCGTCCACGGCTTTTTGCCATCCTCATGGCCTCTGCCTCGCCTCCC
TTACCTAGCCTTTCAGGCGCATGAAGACCTGGCCGCGGTCTTGCCTCAGC
TCCTAGTCTCTTCCACAGCTCGCGCCGCCATCGAGGCCCTCCCTTTAGTA
AAGTCGACTTCCACACGAAACCTCTTCAACAACAATGAGCCTGCACAACG
CCGAGCATTGCTACTTTTTGGTGGACTTGCCTCGGCGTACGTCTGGGGTG
GTGGCACCGACGTGACCCCACGTGATTACCTGCCTGCTTGCATCGCCGTA
CCTTTGTACGAGGTGGCGCGTATGTTGGAGACTTGCCCAATATTGAGCCA
TCAAAGCAACTGTTTGTATAACTGGAAGAAAGGAGCCTCTGAAAAGGCGA
AGGAGAAGGGGGGAAATGTGAACCGCATGCACAATGGCGACGAGGATGCT
TGCAGTGACAGCGACAACCCTTCAAATCCGCTACAAGCCCAAAACTTGGC
ATTGACCTTCTCATTTACGGGTGACGACAACGAACGGATGTTTTATCTGC
TCAGTCTTGAAATTGAGGTGGTAGGTGCTCGTGCGTTACCCTTATTGGAG
ACGGCCCGTCGTGCCGCCCATCATCTGCTTAAAGCTTCTTTTCCTTGTTC
ATGGAAGGGGGATGAGGGGGAAGAAAATGGGATGAAAACAGAGCAGCATC
AACAGCAGCAGCAGCAGCAGCATCAACAAGAAGTGTACCTGCAGCAGGAA
TCGCGAGAAGTAGAGGAAAAGGCCATCATCGACACCTTAATTCAGGTCCG
TGCCTGTATCAGGGCATGCCAATCAATCCTTCTTTCCATGCCTCGTCATG
TGGACCCGGTATTCTTTTTCCATCGGATCCGACCTTATTTGTCAGGATGG
AGAAATAATCCGAGCGTGCCTCAAGGGATAATATATCGAGGTGTGGTGGT
GGGAGAGGGAGAGGGAGGAGGAGAGGTAGGTGGAGGACGAGGACAGGGAC
GAGGACGCGGACGAGAAGATGCCGGTCAAAGCAGTAATGAGAACGAGCAT
CAGCAAGAGGGAGACAATTATTCCGAACAAGAATTAGACGAAAGAGGTCC
TCGCCTCTCTTACTCCGGGGGTTCCGCTGCGCAAAGCTCCCTCCTTCCAT
CCCTTGACCTCTACCTTGGCGTGAATCACGATGAGGCGGGCACGCGTAGT
CAGTCCTCCTATCAATTCGTCAAAGCCATGCGGGCTTACATGCCGAAGGG
ACATCGTCGCTTCCTCGAGGCGCTGGAAGAAGATGTCAAGATTGAGGATG
AGGAGGAAGGAAGGGAGAAAAGGATGAGCATTCGAAGGTATGTATTGTGG
AGATGTGAAGAATGTGAGGGTGGGAAGGAGGAGCGGAAGGAGGATGGGCT
GCGGTTAGTGAGGGCGTATGACGGATGTGTAGAAGCCTTGGTAGCTTTTC
GCATGTCACATTTAGGGATTGTTCGTCTATATATCACGCATCAGCAAGGA
GGGAAGGGGGGAAGGAAGACGGGTGGAGGAGGGTTGGAGGAAGCGGCGGG
GGGCAAGGGCACGGGAGGGCAGGCCCCGAAAGAGTTTCTTAAACCGTTGC
GGGATCAGACAGCAGCAGCGCTGCTGGAGGGAAAGGTAAAAGGGGTGTAA

Synonyms

Publications