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Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| chr6 | genome | chr6:763615..765748 - |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
BLAST of NO06G02710.1 vs.
Match: EWM26282.1 (stress-induced protein sti1 [Nannochloropsis gaditana]) HSP 1 Score: 895.6 bits (2313), Expect = 8.300e-257 Identity = 460/582 (79.04%), Postives = 520/582 (89.35%), Query Frame = 0
Query: 1 MSAAEAEAHKATGNKALQAKEFDEAIAAYTKAIEVSACLPVSGEGAAPRHVYFSNRSAAYLSKNDTVAALEDAEQCIQANPTWPKGFSRKGAALHAMKKYDEAQAAYEAGLEVAPEDAGLAAALDDVKKAKQG-NQPRANPLASIFAPENVARLLTHPVFCKYMMDEDFKAKMHLLQTDPSAISTILQDKRVMEVFGFLTGIDMRAGGMEGEEEESSAYGSSSNSSCSDNKKQEP-PTPAPEPADEDLTEAERELRKRKREALEAKERGNKHYVKKEFSEALAAYEEAIEKDPSNMAFLTNKAAVFYEQGEYAQAVSQCEEAIQVGRSHRAPYADVGKALVRKGKALVKMGDLAGAVEAFKNAQMEHFDKTVERLIKTTEVERKKMEEAAYVDPTKAVEAKDRGNEAFRAGRWPDAVKEYEEAIKRDPTNAAYHNNLAAALSKLMDFPAAKAACEKAIALDAKYVKAWAKKGDIEFFMKEYHRALESYKHGMKIEPNNSLCVQGLQKTMMKIRESSSEEADMERAAHGMADPEIQAILSDPVIQQVLRDVQENPREGQKAMSDPGVAAKIEKLINAGVLRTR 581
M++ EAE HKA GNKALQAK++DEAI YT+A+EVSA LPV+GEGAAPRHVYFSNRSAAYLSK D AALEDAEQCI+ANPTWPKGFSRKGAALH MK+YDEAQAAYE GLEVAP+DAGLA+AL+DVKK K+ N+PR NPLASIFAPENVARL HPVFCKY++D +F AK+ L+QTDP+A +TILQDKR+M+VFGFLTGIDMRAG M+ +E E+S K+ P P PAPEPA+EDL+EAERE RKRK EALEAKERGN+HY+KKEF EALAAYE+AI KDPSNMAFLTNKAAVF+EQG++ + V+QC+EAIQVGR++RAPY DV KALVRKGKAL K GDLA A+EA+++AQMEHFDKTVERLIK+TEVERKK EE AYVDP KAVEAKDRGNEAFRAG+WPDAVKEY EAI+RDP+NAAYHNNLAAALSKLMDF AAK ACEKAIALD KYVKAWAKKGDIEFFMKEYHRALESYKHG++IEPNNSLCVQGLQKT +IR++SS+EADMERAAHGMADPE+QAIL DPVIQQVLRD+QENPREG++A+SDPGVAAKIEKLINAGVLRT+
Sbjct: 1 MTSVEAETHKAAGNKALQAKDYDEAIKCYTQALEVSAALPVTGEGAAPRHVYFSNRSAAYLSKGDAAAALEDAEQCIKANPTWPKGFSRKGAALHTMKRYDEAQAAYEGGLEVAPDDAGLASALEDVKKVKESSNKPRVNPLASIFAPENVARLAGHPVFCKYLLDSEFMAKIKLIQTDPNAFNTILQDKRIMDVFGFLTGIDMRAGDMDEQESEASTV----------KKEAAPAPAPAPEPAEEDLSEAEREERKRKHEALEAKERGNQHYMKKEFVEALAAYEDAIVKDPSNMAFLTNKAAVFFEQGDFTKTVAQCDEAIQVGRANRAPYPDVAKALVRKGKALAKQGDLANAIEAYRDAQMEHFDKTVERLIKSTEVERKKQEELAYVDPAKAVEAKDRGNEAFRAGKWPDAVKEYNEAIRRDPSNAAYHNNLAAALSKLMDFSAAKTACEKAIALDPKYVKAWAKKGDIEFFMKEYHRALESYKHGLEIEPNNSLCVQGLQKTSARIRDASSQEADMERAAHGMADPEVQAILGDPVIQQVLRDLQENPREGRQALSDPGVAAKIEKLINAGVLRTK 572
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO06G02710.1 ID=NO06G02710.1|Name=NO06G02710.1|organism=Nannochloropsis oceanica|type=mRNA|length=2134bp
ACAGCTCCACACACAGCCACACTCTCTCATCAATATGAGTGCCGCGGAAG
CCGAGGCGCATAAGGCAACGGGAAACAAGGCTTTGCAAGCCAAGGAATTT
GACGAGGCTATCGCGGCGTACACCAAGGCCATCGAAGTCAGTGCCTGCCT
CCCCGTCTCGGGTGAGGGCGCCGCCCCCCGGCATGTCTACTTCTCGAACC
GCTCTGCCGCTTACTTATCCAAGAACGATACTGTCGCTGCCTTAGAAGAT
GCGGAGCAATGCATTCAAGCCAACCCCACGTGGCCGAAGGGTTTCTCTCG
CAAGGGTGCAGCGCTTCACGCAATGAAGAAATACGACGAAGCGCAGGCCG
CTTACGAGGCCGGCCTGGAGGTGGCCCCCGAAGATGCTGGTCTCGCCGCG
GCACTGGACGATGTAAAGAAGGCCAAACAAGGAAACCAGCCGCGGGCTAA
CCCGCTTGCGTCGATTTTTGCGCCGGAGAACGTGGCACGCTTGTTGACCC
ATCCCGTATTTTGCAAGTACATGATGGACGAGGATTTCAAGGCCAAGATG
CACTTATTGCAGACGGACCCGAGTGCGATCAGCACAATTCTGCAGGATAA
ACGGGTGATGGAGGTTTTTGGGTTCTTGACCGGGATTGACATGCGCGCAG
GAGGGATGGAGGGCGAAGAGGAGGAGTCATCCGCGTACGGCAGCAGCAGC
AATAGCAGCTGCAGCGACAACAAGAAGCAGGAACCTCCCACCCCGGCGCC
CGAACCCGCAGACGAGGACCTGACAGAGGCTGAGCGGGAATTGCGCAAAC
GGAAGCGGGAGGCGCTGGAGGCGAAGGAGCGCGGGAATAAGCATTATGTG
AAGAAGGAGTTCAGTGAGGCGCTGGCGGCGTATGAAGAGGCAATCGAGAA
AGATCCGAGCAATATGGCGTTTTTGACGAATAAAGCCGCGGTATTTTATG
AGCAGGGGGAATACGCCCAGGCGGTGTCGCAGTGCGAGGAGGCGATCCAG
GTGGGGAGGAGTCACAGGGCGCCATACGCTGATGTGGGGAAGGCGTTAGT
GAGGAAGGGGAAGGCATTGGTTAAGATGGGGGATTTGGCCGGCGCAGTGG
AAGCTTTTAAGAATGCGCAGATGGAGCATTTTGATAAGACGGTGGAGAGG
TTGATCAAGACCACGGAGGTGGAGAGGAAGAAGATGGAGGAGGCGGCGTA
TGTGGATCCTACGAAGGCGGTGGAAGCGAAGGATAGGGGGAATGAAGCTT
TCCGCGCTGGACGGTGGCCGGACGCGGTGAAGGAGTACGAGGAGGCTATC
AAAAGGGACCCGACGAATGCGGCCTATCACAATAATTTAGCGGCGGCGCT
GTCGAAGCTGATGGATTTCCCGGCGGCCAAGGCGGCGTGTGAGAAAGCTA
TTGCACTAGATGCCAAGTATGTCAAGGCATGGGCTAAAAAAGGTGACATT
GAATTTTTCATGAAGGAGTACCATCGGGCACTTGAAAGCTACAAGCATGG
AATGAAAATTGAGCCAAACAACAGCTTGTGTGTGCAGGGGCTGCAGAAGA
CGATGATGAAGATTCGGGAGTCGTCGTCGGAAGAGGCAGACATGGAGCGC
GCGGCCCACGGTATGGCTGATCCTGAGATTCAGGCGATTTTGAGCGACCC
TGTTATTCAGCAGGTTCTGCGGGACGTACAGGAGAATCCGAGGGAAGGAC
AGAAGGCAATGAGCGACCCGGGGGTGGCGGCTAAGATTGAGAAGCTTATT
AATGCGGGGGTACTGAGGACGAGGTAGAGGTAGAGGGTGGTTGTTTGGGT
AGGGGAAAGGACAATAGGATGGGGGTAGGGGGAGAAGGAGGGAAGAAGAG
TACAGAAATGAGTGGTACGATTTGCGCCTGCGCGTTATTTGTCGGACGGA
AGGGAGAATTAGGGAGTAACAAGATGACCGGATTGCAGGTCAGAAGGGTG
GGAGGTTGGATTTTCGAATTGGTAAATCGAACCCCTCATCCTCAAATGCG
AACCCGGTAGAGGAAAAAAAAGATGGATGGAGCTTTACGTGAGTCACTGA
GCCTTATTGTACTTGTGCTTTCTGCGTAAATGTCTCGCCTAAGATAAAGA
ATGGAAAGTGTGGATGCGTGTGTTCTCGCTCAAA back to topprotein sequence of NO06G02710.1 >NO06G02710.1-protein ID=NO06G02710.1-protein|Name=NO06G02710.1|organism=Nannochloropsis oceanica|type=polypeptide|length=581bp
MSAAEAEAHKATGNKALQAKEFDEAIAAYTKAIEVSACLPVSGEGAAPRH
VYFSNRSAAYLSKNDTVAALEDAEQCIQANPTWPKGFSRKGAALHAMKKY
DEAQAAYEAGLEVAPEDAGLAAALDDVKKAKQGNQPRANPLASIFAPENV
ARLLTHPVFCKYMMDEDFKAKMHLLQTDPSAISTILQDKRVMEVFGFLTG
IDMRAGGMEGEEEESSAYGSSSNSSCSDNKKQEPPTPAPEPADEDLTEAE
RELRKRKREALEAKERGNKHYVKKEFSEALAAYEEAIEKDPSNMAFLTNK
AAVFYEQGEYAQAVSQCEEAIQVGRSHRAPYADVGKALVRKGKALVKMGD
LAGAVEAFKNAQMEHFDKTVERLIKTTEVERKKMEEAAYVDPTKAVEAKD
RGNEAFRAGRWPDAVKEYEEAIKRDPTNAAYHNNLAAALSKLMDFPAAKA
ACEKAIALDAKYVKAWAKKGDIEFFMKEYHRALESYKHGMKIEPNNSLCV
QGLQKTMMKIRESSSEEADMERAAHGMADPEIQAILSDPVIQQVLRDVQE
NPREGQKAMSDPGVAAKIEKLINAGVLRTR* back to topmRNA from alignment at chr6:763615..765748- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO06G02710.1 ID=NO06G02710.1|Name=NO06G02710.1|organism=Nannochloropsis oceanica|type=mRNA|length=2134bp|location=Sequence derived from alignment at chr6:763615..765748- (Nannochloropsis oceanica)
ACAGCTCCACACACAGCCACACTCTCTCATCAATATGAGTGCCGCGGAAG
CCGAGGCGCATAAGGCAACGGGAAACAAGGCTTTGCAAGCCAAGGAATTT
GACGAGGCTATCGCGGCGTACACCAAGGCCATCGAAGTCAGTGCCTGCCT
CCCCGTCTCGGGTGAGGGCGCCGCCCCCCGGCATGTCTACTTCTCGAACC
GCTCTGCCGCTTACTTATCCAAGAACGATACTGTCGCTGCCTTAGAAGAT
GCGGAGCAATGCATTCAAGCCAACCCCACGTGGCCGAAGGGTTTCTCTCG
CAAGGGTGCAGCGCTTCACGCAATGAAGAAATACGACGAAGCGCAGGCCG
CTTACGAGGCCGGCCTGGAGGTGGCCCCCGAAGATGCTGGTCTCGCCGCG
GCACTGGACGATGTAAAGAAGGCCAAACAAGGAAACCAGCCGCGGGCTAA
CCCGCTTGCGTCGATTTTTGCGCCGGAGAACGTGGCACGCTTGTTGACCC
ATCCCGTATTTTGCAAGTACATGATGGACGAGGATTTCAAGGCCAAGATG
CACTTATTGCAGACGGACCCGAGTGCGATCAGCACAATTCTGCAGGATAA
ACGGGTGATGGAGGTTTTTGGGTTCTTGACCGGGATTGACATGCGCGCAG
GAGGGATGGAGGGCGAAGAGGAGGAGTCATCCGCGTACGGCAGCAGCAGC
AATAGCAGCTGCAGCGACAACAAGAAGCAGGAACCTCCCACCCCGGCGCC
CGAACCCGCAGACGAGGACCTGACAGAGGCTGAGCGGGAATTGCGCAAAC
GGAAGCGGGAGGCGCTGGAGGCGAAGGAGCGCGGGAATAAGCATTATGTG
AAGAAGGAGTTCAGTGAGGCGCTGGCGGCGTATGAAGAGGCAATCGAGAA
AGATCCGAGCAATATGGCGTTTTTGACGAATAAAGCCGCGGTATTTTATG
AGCAGGGGGAATACGCCCAGGCGGTGTCGCAGTGCGAGGAGGCGATCCAG
GTGGGGAGGAGTCACAGGGCGCCATACGCTGATGTGGGGAAGGCGTTAGT
GAGGAAGGGGAAGGCATTGGTTAAGATGGGGGATTTGGCCGGCGCAGTGG
AAGCTTTTAAGAATGCGCAGATGGAGCATTTTGATAAGACGGTGGAGAGG
TTGATCAAGACCACGGAGGTGGAGAGGAAGAAGATGGAGGAGGCGGCGTA
TGTGGATCCTACGAAGGCGGTGGAAGCGAAGGATAGGGGGAATGAAGCTT
TCCGCGCTGGACGGTGGCCGGACGCGGTGAAGGAGTACGAGGAGGCTATC
AAAAGGGACCCGACGAATGCGGCCTATCACAATAATTTAGCGGCGGCGCT
GTCGAAGCTGATGGATTTCCCGGCGGCCAAGGCGGCGTGTGAGAAAGCTA
TTGCACTAGATGCCAAGTATGTCAAGGCATGGGCTAAAAAAGGTGACATT
GAATTTTTCATGAAGGAGTACCATCGGGCACTTGAAAGCTACAAGCATGG
AATGAAAATTGAGCCAAACAACAGCTTGTGTGTGCAGGGGCTGCAGAAGA
CGATGATGAAGATTCGGGAGTCGTCGTCGGAAGAGGCAGACATGGAGCGC
GCGGCCCACGGTATGGCTGATCCTGAGATTCAGGCGATTTTGAGCGACCC
TGTTATTCAGCAGGTTCTGCGGGACGTACAGGAGAATCCGAGGGAAGGAC
AGAAGGCAATGAGCGACCCGGGGGTGGCGGCTAAGATTGAGAAGCTTATT
AATGCGGGGGTACTGAGGACGAGGTAGAGGTAGAGGGTGGTTGTTTGGGT
AGGGGAAAGGACAATAGGATGGGGGTAGGGGGAGAAGGAGGGAAGAAGAG
TACAGAAATGAGTGGTACGATTTGCGCCTGCGCGTTATTTGTCGGACGGA
AGGGAGAATTAGGGAGTAACAAGATGACCGGATTGCAGGTCAGAAGGGTG
GGAGGTTGGATTTTCGAATTGGTAAATCGAACCCCTCATCCTCAAATGCG
AACCCGGTAGAGGAAAAAAAAGATGGATGGAGCTTTACGTGAGTCACTGA
GCCTTATTGTACTTGTGCTTTCTGCGTAAATGTCTCGCCTAAGATAAAGA
ATGGAAAGTGTGGATGCGTGTGTTCTCGCTCAAA back to topCoding sequence (CDS) from alignment at chr6:763615..765748- >NO06G02710.1 ID=NO06G02710.1|Name=NO06G02710.1|organism=Nannochloropsis oceanica|type=CDS|length=1743bp|location=Sequence derived from alignment at chr6:763615..765748- (Nannochloropsis oceanica)
ATGAGTGCCGCGGAAGCCGAGGCGCATAAGGCAACGGGAAACAAGGCTTT
GCAAGCCAAGGAATTTGACGAGGCTATCGCGGCGTACACCAAGGCCATCG
AAGTCAGTGCCTGCCTCCCCGTCTCGGGTGAGGGCGCCGCCCCCCGGCAT
GTCTACTTCTCGAACCGCTCTGCCGCTTACTTATCCAAGAACGATACTGT
CGCTGCCTTAGAAGATGCGGAGCAATGCATTCAAGCCAACCCCACGTGGC
CGAAGGGTTTCTCTCGCAAGGGTGCAGCGCTTCACGCAATGAAGAAATAC
GACGAAGCGCAGGCCGCTTACGAGGCCGGCCTGGAGGTGGCCCCCGAAGA
TGCTGGTCTCGCCGCGGCACTGGACGATGTAAAGAAGGCCAAACAAGGAA
ACCAGCCGCGGGCTAACCCGCTTGCGTCGATTTTTGCGCCGGAGAACGTG
GCACGCTTGTTGACCCATCCCGTATTTTGCAAGTACATGATGGACGAGGA
TTTCAAGGCCAAGATGCACTTATTGCAGACGGACCCGAGTGCGATCAGCA
CAATTCTGCAGGATAAACGGGTGATGGAGGTTTTTGGGTTCTTGACCGGG
ATTGACATGCGCGCAGGAGGGATGGAGGGCGAAGAGGAGGAGTCATCCGC
GTACGGCAGCAGCAGCAATAGCAGCTGCAGCGACAACAAGAAGCAGGAAC
CTCCCACCCCGGCGCCCGAACCCGCAGACGAGGACCTGACAGAGGCTGAG
CGGGAATTGCGCAAACGGAAGCGGGAGGCGCTGGAGGCGAAGGAGCGCGG
GAATAAGCATTATGTGAAGAAGGAGTTCAGTGAGGCGCTGGCGGCGTATG
AAGAGGCAATCGAGAAAGATCCGAGCAATATGGCGTTTTTGACGAATAAA
GCCGCGGTATTTTATGAGCAGGGGGAATACGCCCAGGCGGTGTCGCAGTG
CGAGGAGGCGATCCAGGTGGGGAGGAGTCACAGGGCGCCATACGCTGATG
TGGGGAAGGCGTTAGTGAGGAAGGGGAAGGCATTGGTTAAGATGGGGGAT
TTGGCCGGCGCAGTGGAAGCTTTTAAGAATGCGCAGATGGAGCATTTTGA
TAAGACGGTGGAGAGGTTGATCAAGACCACGGAGGTGGAGAGGAAGAAGA
TGGAGGAGGCGGCGTATGTGGATCCTACGAAGGCGGTGGAAGCGAAGGAT
AGGGGGAATGAAGCTTTCCGCGCTGGACGGTGGCCGGACGCGGTGAAGGA
GTACGAGGAGGCTATCAAAAGGGACCCGACGAATGCGGCCTATCACAATA
ATTTAGCGGCGGCGCTGTCGAAGCTGATGGATTTCCCGGCGGCCAAGGCG
GCGTGTGAGAAAGCTATTGCACTAGATGCCAAGTATGTCAAGGCATGGGC
TAAAAAAGGTGACATTGAATTTTTCATGAAGGAGTACCATCGGGCACTTG
AAAGCTACAAGCATGGAATGAAAATTGAGCCAAACAACAGCTTGTGTGTG
CAGGGGCTGCAGAAGACGATGATGAAGATTCGGGAGTCGTCGTCGGAAGA
GGCAGACATGGAGCGCGCGGCCCACGGTATGGCTGATCCTGAGATTCAGG
CGATTTTGAGCGACCCTGTTATTCAGCAGGTTCTGCGGGACGTACAGGAG
AATCCGAGGGAAGGACAGAAGGCAATGAGCGACCCGGGGGTGGCGGCTAA
GATTGAGAAGCTTATTAATGCGGGGGTACTGAGGACGAGGTAG back to top
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