NO06G02390.1, NO06G02390.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO06G02390.1
Unique NameNO06G02390.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1431
Alignment locationchr6:683110..684991 +

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Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr6genomechr6:683110..684991 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
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BLAST of NO06G02390.1 vs.
Match: EWM26254.1 (homoserine o-acetyltransferase [Nannochloropsis gaditana])

HSP 1 Score: 570.5 bits (1469), Expect = 5.000e-159
Identity = 278/350 (79.43%), Postives = 309/350 (88.29%), Query Frame = 0 
Query:  128 PHFTTESGVAMRDVEVRYNTFGHLNEAKDNVLVVCHALTGNARLDTWWSSILGPGKAFDTDKYLVVCANILGSCYGTTGPTSLDPATGRPYGVRFPQVTIRDTVALHIRMLKEALGARSVACVVGGSLGGMQALEWVFLGNSNK-NHSSNNNENEENFVRSAVVIACGARHTAWQIGISETQRQAIYADPLWRGGEFDHTRPPLQGLAVARQIAMFSYRTPHGFENKFGRAQAEDGRFEVRRYLEYQGQKFLSRFDALTYVRLTEKMDSHDVGRGRGGMEVALKGLRVPVLVLGIDSDVLYPLHEQEEMARLIPKGELRVVRSREGHDGFLLEQEQVGGAMKEFLKEHRL 477
            PHF   S   MRDVEVRYNTFG LNEA+DNV+VVCHALTGNARLDTWWSS+LGPG+AFDTDKY VVCANILGSCYGTTGP S DPATG+ YG RFP VTIRDTV LH+RMLKEA+G RSVA VVGGS+GGMQALEW FLG S   +  +   E+ E+FV+SAVVIACGARHTAWQIGISETQRQAIYADP W+GG FD   PP+QGLAVARQIAMFSYRT HGFENKFGRA+AEDGR+EVRRYLEYQGQKFLSRFDALTYVRLTEKMDSHDVGR RGG++ AL+ LR+PVLV+GIDSDVLYPLHEQEEMA LIP GEL+VV+SR GHD FLLEQ+QVGGA+ +FL++++L
Sbjct:   37 PHF---SRAIMRDVEVRYNTFGRLNEARDNVMVVCHALTGNARLDTWWSSLLGPGQAFDTDKYFVVCANILGSCYGTTGPMSRDPATGQVYGPRFPHVTIRDTVRLHMRMLKEAVGVRSVASVVGGSMGGMQALEWAFLGLSGGGSRGAEAGESGESFVKSAVVIACGARHTAWQIGISETQRQAIYADPNWQGGAFDPAAPPVQGLAVARQIAMFSYRTSHGFENKFGRARAEDGRYEVRRYLEYQGQKFLSRFDALTYVRLTEKMDSHDVGRDRGGVDAALRSLRIPVLVIGIDSDVLYPLHEQEEMAGLIPMGELKVVQSRNGHDAFLLEQQQVGGAIAQFLRKNQL 383
The following BLAST results are available for this feature:
BLAST of NO06G02390.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1
Match NameE-valueIdentityDescription
EWM26254.15.000e-15979.43homoserine o-acetyltransferase [Nannochloropsis ga... [more]
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO06G02390NO06G02390Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO06G02390.1NO06G02390.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO06G02390.1.cds1NO06G02390.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO06G02390.1.cds2NO06G02390.1.cds2Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO06G02390.1.cds3NO06G02390.1.cds3Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO06G02390.1 ID=NO06G02390.1|Name=NO06G02390.1|organism=Nannochloropsis oceanica|type=mRNA|length=1431bp
ATGAGGGCAGCATTGCTGCGTATTGTGGTCACAACCCCTCGACGAGCTTT
GACTCGCGGCAGTCCAGTTTGCCTGAGTGACAGTAGCATCAGCAGGGACA
GCGGCATCACGCTTCCCGCCCCACCACCAAGCCTCCATCAAGCGAATAAC
CACGTCACCATGCCCCTCCATGTGTTTACGACTGGCTCGGGCAAGGATAA
GGGCAGCAGCAGTATCAGCAGCAGCAGCAGCAACAGCAACAGTAGCAGCA
TCGCGTCTCCTAGCACGCTAATGACTCCCTCCCACCGTGGGCTGGCCACT
TCGGCCGCCGCCCCGGGAGAAGCCGTGTTGCTCAAGGATGAATACGGCAA
CATGGATGCATCGGGACAGACATATGTGGTACCGCATTTCACGACGGAGA
GCGGCGTGGCCATGCGGGACGTGGAAGTACGCTACAACACCTTTGGGCAC
CTGAACGAAGCGAAAGACAACGTCTTGGTTGTATGCCATGCCCTTACGGG
GAATGCCCGGTTGGATACGTGGTGGTCCTCCATCCTGGGGCCCGGGAAAG
CCTTCGATACCGACAAGTACCTCGTTGTGTGCGCGAACATCTTGGGCTCC
TGCTACGGCACTACCGGCCCCACGTCCCTCGATCCGGCGACGGGCCGACC
CTACGGTGTGCGCTTCCCCCAGGTGACTATCCGCGACACGGTGGCCCTGC
ACATACGCATGTTGAAGGAGGCATTGGGTGCCCGTTCGGTTGCCTGTGTG
GTAGGAGGTTCCTTGGGAGGGATGCAAGCCCTGGAATGGGTCTTCCTCGG
TAACAGCAACAAAAATCACAGCAGCAACAACAATGAAAATGAGGAGAATT
TTGTGCGTTCTGCGGTGGTGATCGCGTGCGGGGCCCGTCACACGGCGTGG
CAGATCGGCATCTCCGAGACGCAGCGCCAAGCCATTTACGCAGACCCCCT
CTGGCGTGGGGGCGAATTCGATCACACTCGTCCCCCGTTGCAGGGGCTGG
CAGTGGCGCGGCAGATTGCCATGTTCTCCTACAGAACTCCCCATGGGTTC
GAAAATAAATTCGGGAGGGCACAGGCGGAGGATGGGAGGTTTGAGGTGAG
GCGGTATTTGGAATACCAAGGACAGAAATTCTTGTCGCGATTCGACGCCT
TGACCTATGTGAGATTAACGGAAAAAATGGACTCTCATGATGTGGGGAGG
GGGAGGGGAGGCATGGAGGTGGCGCTGAAGGGCCTGCGGGTGCCGGTGTT
GGTGCTGGGGATTGACAGTGACGTCTTGTACCCCTTGCATGAACAGGAGG
AGATGGCCCGGTTGATTCCGAAGGGAGAATTAAGGGTGGTAAGGAGTAGG
GAGGGGCATGACGGGTTTTTACTGGAGCAGGAGCAGGTGGGGGGGGCGAT
GAAGGAGTTCTTGAAGGAGCATCGACTGTAG
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protein sequence of NO06G02390.1

>NO06G02390.1-protein ID=NO06G02390.1-protein|Name=NO06G02390.1|organism=Nannochloropsis oceanica|type=polypeptide|length=477bp
MRAALLRIVVTTPRRALTRGSPVCLSDSSISRDSGITLPAPPPSLHQANN
HVTMPLHVFTTGSGKDKGSSSISSSSSNSNSSSIASPSTLMTPSHRGLAT
SAAAPGEAVLLKDEYGNMDASGQTYVVPHFTTESGVAMRDVEVRYNTFGH
LNEAKDNVLVVCHALTGNARLDTWWSSILGPGKAFDTDKYLVVCANILGS
CYGTTGPTSLDPATGRPYGVRFPQVTIRDTVALHIRMLKEALGARSVACV
VGGSLGGMQALEWVFLGNSNKNHSSNNNENEENFVRSAVVIACGARHTAW
QIGISETQRQAIYADPLWRGGEFDHTRPPLQGLAVARQIAMFSYRTPHGF
ENKFGRAQAEDGRFEVRRYLEYQGQKFLSRFDALTYVRLTEKMDSHDVGR
GRGGMEVALKGLRVPVLVLGIDSDVLYPLHEQEEMARLIPKGELRVVRSR
EGHDGFLLEQEQVGGAMKEFLKEHRL*
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mRNA from alignment at chr6:683110..684991+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO06G02390.1 ID=NO06G02390.1|Name=NO06G02390.1|organism=Nannochloropsis oceanica|type=mRNA|length=1882bp|location=Sequence derived from alignment at chr6:683110..684991+ (Nannochloropsis oceanica)
ATGAGGGCAGCATTGCTGCGTATTGTGGTCACAACCCCTCGACGAGCTTT
GACTCGCGGCAGTCCAGTTTGCCTGAGTGACAGTAGCATCAGCAGGGACA
GCGGCATCACGCTTCCCGCCCCACCACCAAGCCTCCATCAAGCGAATAAC
CACGTCACCATGCCCCTCCATGTGTTTACGACTGGCTCGGGCAAGGATAA
GGGCAGCAGCAGTATCAGCAGCAGCAGCAGCAACAGCAACAGTAGCAGCA
TCGCGTCTCCTAGCACGCTAATGACTCCCTCCCACCGTGGGCTGGCCACT
TCGGCCGCCGCCCCGGGAGAAGCCGTGTTGCTCAAGGATGAATACGGCAA
CATGGATGCATCGGGACAGACATATGTGGTACCGCATTTCACGACGGAGA
GCGGGTACGTGATTTTGCGGGGATGCAGGAGATGAAAAGGGGAAGCGGAT
TGGGGGACGGGGGGAGGAAGGAATGACAGGACTGGGGGGGGGGGCTGGAG
ACACCGGCACTTTTTTGGTGATAATGTATGAGCAAGAGATAAAGAGAGGG
AGGAGAATTAGGGTCGCAGGGAAGGGAAAGAGCAAAAGAAAGCTTAGTAA
TTCAAGGGCGCCGGTATCCGCAGAGCTACCACACCAATCTCACGATTCTC
CCACTTCCATCCATCTGTCCTCCTCATTTTCCCCTTTCCTTCCCAGCGTG
GCCATGCGGGACGTGGAAGTACGCTACAACACCTTTGGGCACCTGAACGA
AGCGAAAGACAACGTCTTGGTTGTATGCCATGCCCTTACGGGGAATGCCC
GGTTGGATACGTGGTGGTCCTCCATCCTGGGGCCCGGGAAAGCCTTCGAT
ACCGACAAGTACCTCGTTGTGTGCGCGAACATCTTGGGTACATATGGAGG
AAGGGCAGGAAGGAGGGGAGGAGGGCAAGGAGCATTGGTGTAGGAAAGAC
GTCAGCACGGCTTTGAACCTCGCAACGGCCAGCTGATACGAGGCTCACAG
CACCCACCACCCCTCCCTCCCTACCTCTCTCCCTCCCTCCAACCAGGCTC
CTGCTACGGCACTACCGGCCCCACGTCCCTCGATCCGGCGACGGGCCGAC
CCTACGGTGTGCGCTTCCCCCAGGTGACTATCCGCGACACGGTGGCCCTG
CACATACGCATGTTGAAGGAGGCATTGGGTGCCCGTTCGGTTGCCTGTGT
GGTAGGAGGTTCCTTGGGAGGGATGCAAGCCCTGGAATGGGTCTTCCTCG
GTAACAGCAACAAAAATCACAGCAGCAACAACAATGAAAATGAGGAGAAT
TTTGTGCGTTCTGCGGTGGTGATCGCGTGCGGGGCCCGTCACACGGCGTG
GCAGATCGGCATCTCCGAGACGCAGCGCCAAGCCATTTACGCAGACCCCC
TCTGGCGTGGGGGCGAATTCGATCACACTCGTCCCCCGTTGCAGGGGCTG
GCAGTGGCGCGGCAGATTGCCATGTTCTCCTACAGAACTCCCCATGGGTT
CGAAAATAAATTCGGGAGGGCACAGGCGGAGGATGGGAGGTTTGAGGTGA
GGCGGTATTTGGAATACCAAGGACAGAAATTCTTGTCGCGATTCGACGCC
TTGACCTATGTGAGATTAACGGAAAAAATGGACTCTCATGATGTGGGGAG
GGGGAGGGGAGGCATGGAGGTGGCGCTGAAGGGCCTGCGGGTGCCGGTGT
TGGTGCTGGGGATTGACAGTGACGTCTTGTACCCCTTGCATGAACAGGAG
GAGATGGCCCGGTTGATTCCGAAGGGAGAATTAAGGGTGGTAAGGAGTAG
GGAGGGGCATGACGGGTTTTTACTGGAGCAGGAGCAGGTGGGGGGGGCGA
TGAAGGAGTTCTTGAAGGAGCATCGACTGTAG
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Coding sequence (CDS) from alignment at chr6:683110..684991+

>NO06G02390.1 ID=NO06G02390.1|Name=NO06G02390.1|organism=Nannochloropsis oceanica|type=CDS|length=1431bp|location=Sequence derived from alignment at chr6:683110..684991+ (Nannochloropsis oceanica)
ATGAGGGCAGCATTGCTGCGTATTGTGGTCACAACCCCTCGACGAGCTTT
GACTCGCGGCAGTCCAGTTTGCCTGAGTGACAGTAGCATCAGCAGGGACA
GCGGCATCACGCTTCCCGCCCCACCACCAAGCCTCCATCAAGCGAATAAC
CACGTCACCATGCCCCTCCATGTGTTTACGACTGGCTCGGGCAAGGATAA
GGGCAGCAGCAGTATCAGCAGCAGCAGCAGCAACAGCAACAGTAGCAGCA
TCGCGTCTCCTAGCACGCTAATGACTCCCTCCCACCGTGGGCTGGCCACT
TCGGCCGCCGCCCCGGGAGAAGCCGTGTTGCTCAAGGATGAATACGGCAA
CATGGATGCATCGGGACAGACATATGTGGTACCGCATTTCACGACGGAGA
GCGGCGTGGCCATGCGGGACGTGGAAGTACGCTACAACACCTTTGGGCAC
CTGAACGAAGCGAAAGACAACGTCTTGGTTGTATGCCATGCCCTTACGGG
GAATGCCCGGTTGGATACGTGGTGGTCCTCCATCCTGGGGCCCGGGAAAG
CCTTCGATACCGACAAGTACCTCGTTGTGTGCGCGAACATCTTGGGCTCC
TGCTACGGCACTACCGGCCCCACGTCCCTCGATCCGGCGACGGGCCGACC
CTACGGTGTGCGCTTCCCCCAGGTGACTATCCGCGACACGGTGGCCCTGC
ACATACGCATGTTGAAGGAGGCATTGGGTGCCCGTTCGGTTGCCTGTGTG
GTAGGAGGTTCCTTGGGAGGGATGCAAGCCCTGGAATGGGTCTTCCTCGG
TAACAGCAACAAAAATCACAGCAGCAACAACAATGAAAATGAGGAGAATT
TTGTGCGTTCTGCGGTGGTGATCGCGTGCGGGGCCCGTCACACGGCGTGG
CAGATCGGCATCTCCGAGACGCAGCGCCAAGCCATTTACGCAGACCCCCT
CTGGCGTGGGGGCGAATTCGATCACACTCGTCCCCCGTTGCAGGGGCTGG
CAGTGGCGCGGCAGATTGCCATGTTCTCCTACAGAACTCCCCATGGGTTC
GAAAATAAATTCGGGAGGGCACAGGCGGAGGATGGGAGGTTTGAGGTGAG
GCGGTATTTGGAATACCAAGGACAGAAATTCTTGTCGCGATTCGACGCCT
TGACCTATGTGAGATTAACGGAAAAAATGGACTCTCATGATGTGGGGAGG
GGGAGGGGAGGCATGGAGGTGGCGCTGAAGGGCCTGCGGGTGCCGGTGTT
GGTGCTGGGGATTGACAGTGACGTCTTGTACCCCTTGCATGAACAGGAGG
AGATGGCCCGGTTGATTCCGAAGGGAGAATTAAGGGTGGTAAGGAGTAGG
GAGGGGCATGACGGGTTTTTACTGGAGCAGGAGCAGGTGGGGGGGGCGAT
GAAGGAGTTCTTGAAGGAGCATCGACTGTAG
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Synonyms
Publications