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Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
chr6 | genome | chr6:664972..666865 + |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO06G02290.1 ID=NO06G02290.1|Name=NO06G02290.1|organism=Nannochloropsis oceanica|type=mRNA|length=1831bp TGGGGCTGTTCTGTGATTCTCCGACTGTCGGCGCAACATTCGATTTTCGA TCTACTGGAGCGGCTCGCCAAATAATTAAAATTTCTTTCAAACGACTTAT ACTGCATCCTGGAAGTGGGAGATAATCAAATAGGCGCAAGTGATCCAAGG CGTATCCCCAGGTCTACAGAAGAATTGGGTTTGACGCGTCCAATAGATGT CGATCGACTCACGTCACGTCATCCTGGCAAGTCTCACCGTTGACGTTTTT TGACGTACGTATTGACAATGTGCAGACCAAACTCCATCTCCACTGAACTT GGCATGTCGACGCCCCTCAACGCAGGCACGATTTCCTGACAGGCGTCTTG GTCCGAAACCTCCTACCCTCTTATCTCATCAATGGTGACGGTTTTAAGGA TTTTGTGTCCGCCATCCCCCCAATACAAGCTGCCGACGAACTGGACTGTG CGCAAGTATACGGAAGCGATATTCGACTAACCCAAGGCGCTGACCTCCAA GGCTGCCAGTAGTGCAGTATCTGGTTTGACCGCCTGCCTTGTCACAGATG GATGGGCCACACGGAACGGAAGGTCGTACATCGGCACGTTTGCCGCTACG CTGGACGACGAGTTCAGGGTTCGAACCATCTGCCTCGACATGACGGAGTG CCAGAAGAAGCATCACACGGCCGCCGAGATCACCGGACTGCTGGCCAAGA CGGTGGAGGATTTCGATAATTTGCCTGCAGCCGTCTACGAAGCACGACGC TGGGTCCATCGTAAAGAAATGCGTCCCCGAAGCTGGCCTCAAGTCCTCCG CCTGTACACATGCAGCGTAAAATCATTAGCTTGATCAGCACCGTCCCTGC GGGACACGTTTGCGGTGGCATCCCACCTCGACCCGCGCTTCAAGGCGCTC TGCGATTACTACGTACCCGAGCAGCATGTAAAAGGATGCAAGCCTGCCTG CGCGTAGCACAGGGCACGGCCATCACGCAGTTCAAGGATGCGGGCACATA CAGTGGCAGGGGCGCGAAGCAGGACGCAGAGGGCAGTGGCATTGTCGACA ACTTGGACCCCTTGGCCGCCGAGAATTTGGCCTCCAGAAGCTGTATTCTA GGCGATAGGACGGAGAACATTCTCAACGTTGAGGAGGTAACCCGTGATCT GGCCGAGTACATCCGCACGCCTGTCGAGCTTTCAAAGACATGCCTGCTGG AATGGTGGTGGCGCAATAAGCAGTCCTTCCCTGCCCTGGCGGCGCTTGCG CGGCAGTACCTCTTAATACCTGCAATCTCCTTGGAGGTTGAATGATATTT TTTTTTGCGTGCCCGTCGATCAGCCACCTTTGGACGCGGCTGGGCATCCA GTCTATTCAGCAGACTCTGTTCCTCCAGCTGAATTGGGACACTCGCATAA CCACTGAGGTCACGGGCGCGGCTCTAGAGGAGGCCAAAGAGGGCGACTAG GGGGATGGGATGATGAATATCGTGCATGATGACGGGCCGAGCTATAAGGG GAAGGATCGTATAAATGAGGAGGAAGAACGCCGCTCTCTTCCCCATCGGT TTCGAGGGCAAGAACTTCGCTTTCCTTGATGACAAGACCGAATATGGTGT GGCAGATTTCTCTTCGTCTTGATCGGAGCCACTTCGTCCTTCTCCAAGGC AGATACGCATCATTCAACAACACGATCACGATCACCGTGTCCATCGCAAC CTATGTCAAGGCAGGGCTGGTTCTCTCGCCCCCACGAGAGAATTTCTACA AGCCGAGTTGTTGCGAAGGAATGACAAGAAACGATAACATACCATAAAAA TATAGCGAAAACAAAAGCATCGTTCAGCCAA back to topprotein sequence of NO06G02290.1 >NO06G02290.1-protein ID=NO06G02290.1-protein|Name=NO06G02290.1|organism=Nannochloropsis oceanica|type=polypeptide|length=162bp MQRKIISLISTVPAGHVCGGIPPRPALQGALRLLRTRAACKRMQACLRVA QGTAITQFKDAGTYSGRGAKQDAEGSGIVDNLDPLAAENLASRSCILGDR TENILNVEEVTRDLAEYIRTPVELSKTCLLEWWWRNKQSFPALAALARQY LLIPAISLEVE* back to topmRNA from alignment at chr6:664972..666865+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO06G02290.1 ID=NO06G02290.1|Name=NO06G02290.1|organism=Nannochloropsis oceanica|type=mRNA|length=1894bp|location=Sequence derived from alignment at chr6:664972..666865+ (Nannochloropsis oceanica) TGGGGCTGTTCTGTGATTCTCCGACTGTCGGCGCAACATTCGATTTTCGA
TCTACTGGAGCGGCTCGCCAAATAATTAAAATTTCTTTCAAACGACTTAT
ACTGCATCCTGGAAGTGGGAGATAATCAAATAGGCGCAAGTGATCCAAGG
CGTATCCCCAGGTCTACAGAAGAATTGGGTTTGACGCGTCCAATAGATGT
CGATCGACTCACGTCACGTCATCCTGGCAAGTCTCACCGTTGACGTTTTT
TGACGTACGTATTGACAATGTGCAGACCAAACTCCATCTCCACTGAACTT
GGCATGTCGACGCCCCTCAACGCAGGCACGATTTCCTGACAGGCGTCTTG
GTCCGAAACCTCCTACCCTCTTATCTCATCAATGGTGACGGTTTTAAGGA
TTTTGTGTCCGCCATCCCCCCAATACAAGCTGCCGACGAACTGGACTGTG
CGCAAGTATACGGAAGCGATATTCGACTAACCCAAGGCGCTGACCTCCAA
GGCTGCCAGTAGTGCAGTATCTGGTTTGACCGCCTGCCTTGTCACAGATG
GATGGGCCACACGGAACGGAAGGTCGTACATCGGCACGTTTGCCGCTACG
CTGGACGACGAGTTCAGGGTTCGAACCATCTGCCTCGACATGACGGAGTG
CCAGAAGAAGCATCACACGGCCGCCGAGATCACCGGACTGCTGGCCAAGA
CGGTGGAGGATTTCGATAATTTGCCTGCAGCCGTCTACGAAGCACGACGC
TGGGTCCATCGTAAAGAAATGTGCGTGATCGTGACAATTTTAGGTGTCTC
ATTCATCCAATTCTAATCTCAAGGTCCACATAGGCGTCCCCGAAGCTGGC
CTCAAGTCCTCCGCCTGTACACATGCAGCGTAAAATCATTAGCTTGATCA
GCACCGTCCCTGCGGGACACGTTTGCGGTGGCATCCCACCTCGACCCGCG
CTTCAAGGCGCTCTGCGATTACTACGTACCCGAGCAGCATGTAAAAGGAT
GCAAGCCTGCCTGCGCGTAGCACAGGGCACGGCCATCACGCAGTTCAAGG
ATGCGGGCACATACAGTGGCAGGGGCGCGAAGCAGGACGCAGAGGGCAGT
GGCATTGTCGACAACTTGGACCCCTTGGCCGCCGAGAATTTGGCCTCCAG
AAGCTGTATTCTAGGCGATAGGACGGAGAACATTCTCAACGTTGAGGAGG
TAACCCGTGATCTGGCCGAGTACATCCGCACGCCTGTCGAGCTTTCAAAG
ACATGCCTGCTGGAATGGTGGTGGCGCAATAAGCAGTCCTTCCCTGCCCT
GGCGGCGCTTGCGCGGCAGTACCTCTTAATACCTGCAATCTCCTTGGAGG
TTGAATGATATTTTTTTTTGCGTGCCCGTCGATCAGCCACCTTTGGACGC
GGCTGGGCATCCAGTCTATTCAGCAGACTCTGTTCCTCCAGCTGAATTGG
GACACTCGCATAACCACTGAGGTCACGGGCGCGGCTCTAGAGGAGGCCAA
AGAGGGCGACTAGGGGGATGGGATGATGAATATCGTGCATGATGACGGGC
CGAGCTATAAGGGGAAGGATCGTATAAATGAGGAGGAAGAACGCCGCTCT
CTTCCCCATCGGTTTCGAGGGCAAGAACTTCGCTTTCCTTGATGACAAGA
CCGAATATGGTGTGGCAGATTTCTCTTCGTCTTGATCGGAGCCACTTCGT
CCTTCTCCAAGGCAGATACGCATCATTCAACAACACGATCACGATCACCG
TGTCCATCGCAACCTATGTCAAGGCAGGGCTGGTTCTCTCGCCCCCACGA
GAGAATTTCTACAAGCCGAGTTGTTGCGAAGGAATGACAAGAAACGATAA
CATACCATAAAAATATAGCGAAAACAAAAGCATCGTTCAGCCAA back to topCoding sequence (CDS) from alignment at chr6:664972..666865+ >NO06G02290.1 ID=NO06G02290.1|Name=NO06G02290.1|organism=Nannochloropsis oceanica|type=CDS|length=486bp|location=Sequence derived from alignment at chr6:664972..666865+ (Nannochloropsis oceanica) ATGCAGCGTAAAATCATTAGCTTGATCAGCACCGTCCCTGCGGGACACGT TTGCGGTGGCATCCCACCTCGACCCGCGCTTCAAGGCGCTCTGCGATTAC TACGTACCCGAGCAGCATGTAAAAGGATGCAAGCCTGCCTGCGCGTAGCA CAGGGCACGGCCATCACGCAGTTCAAGGATGCGGGCACATACAGTGGCAG GGGCGCGAAGCAGGACGCAGAGGGCAGTGGCATTGTCGACAACTTGGACC CCTTGGCCGCCGAGAATTTGGCCTCCAGAAGCTGTATTCTAGGCGATAGG ACGGAGAACATTCTCAACGTTGAGGAGGTAACCCGTGATCTGGCCGAGTA CATCCGCACGCCTGTCGAGCTTTCAAAGACATGCCTGCTGGAATGGTGGT GGCGCAATAAGCAGTCCTTCCCTGCCCTGGCGGCGCTTGCGCGGCAGTAC CTCTTAATACCTGCAATCTCCTTGGAGGTTGAATGA back to top
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