NO06G02190.1, NO06G02190.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO06G02190.1
Unique NameNO06G02190.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1458
Alignment locationchr6:638733..640407 -

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Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr6genomechr6:638733..640407 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
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BLAST of NO06G02190.1 vs.
Match: OQS01722.1 (meiosis-specific nuclear structural protein 1 [Achlya hypogyna])

HSP 1 Score: 147.5 bits (371), Expect = 1.100e-31
Identity = 148/467 (31.69%), Postives = 255/467 (54.60%), Query Frame = 0 
Query:   14 RMTAHRLEQRVVQQRFQETKIQNILASTAGDRILNYTAASEARIIKQREHQDAKRAAAARALEEEARAMEAEKEAQRRQQAESEARIAAKDAERKQREQKECELQRICETSDELRELEKALAIAYMNKERAAQHEERQLLDHLDKEWAIRIDEDMETRRRLAVQTDRGRGADPRFDRQMLKADIQKQLVEQERRRQELESATAAQDKALVQAAVKRAQQEEADRHRALARKR--EEVQQMHRKHEEARERIQREQQQRDAEEEVRIQHYQAMQIARKSHIRQRQDERRARQEAVVAKIVAEAKQKQADEEELETLRTLLHAEKAEASRLAREEAKWIKKQKDRDDLRRAQEEQLRLKARQVAWERVREEKMVAEMQAKFEAESRREADITAHRRQADATHQMRLREQLEDGRRRVQAEHASEHGPSREEAAKEAYKQQVVTEARRRLLKEHASLLGEFLPKNLAKEV 479
            R+T  ++E+ +  +R  E +   +L   + +++       +  ++ +R    A +  A   LEE     E E +   R + ++++   A + ER+  E++E E+QRICE+S+ELRELE  L +AY+NKERA Q  ER+ L  ++K     I+  ME  R+ A      +    R D    K  IQ+Q++++ +  +E  +  A  D+A V A +K+ + E  DRH    R+R   E + M    +  R   + +  +R+ EE++RI  Y      R++ I+++  E++ R+E +   + AE ++++ +EEE   LR  L  E+   +   +  AK ++KQKDRD++ R+ EEQ RLKA+ +  ++ +EE+  A ++AKF +E RR  ++   RR+    ++  + EQ +   +  Q E   E   +   A +EA+K+Q+V EA+RRLL EHA  L  FLPK +AK+V
Sbjct:    4 RVTTRQVERTMADRRRIEAENAELLRYASSNQVQAMANKGDMAVLAKRRGNAAFQRNAEAMLEERTVLAERETKRNLRTKEQNDSIARALEEERRVAERREREIQRICESSEELRELESMLKVAYVNKERAVQQAERETLQQIEKSREKAIETQMEYDRQRAEVDMAAKEIARRADAVASKQSIQEQMLDRLKLYEEA-AKEAEMDRAKVDAIMKQIEAE--DRHEVEKRERYVAEARVMIEDCKRQRAAEKEDAAKREREEDLRIAQYSKRVEQREAGIKEKVAEKKKREEEMFLAVEAEIRRQRKEEEEFARLRDELWEEEMLEAHREKARAKMLQKQKDRDEMIRSNEEQQRLKAKFLQDQKTKEEEYNAYLKAKFASEERRAMELEIFRRKQRDEYKQAIHEQNQLKAQMYQLELEKERMEATRIAEEEAFKKQIVEEAKRRLLDEHAQSLRGFLPKGVAKQV 467
The following BLAST results are available for this feature:
BLAST of NO06G02190.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1
Match NameE-valueIdentityDescription
OQS01722.11.100e-3131.69meiosis-specific nuclear structural protein 1 [Ach... [more]
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO06G02190NO06G02190Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO06G02190.1NO06G02190.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO06G02190.1.cds1NO06G02190.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO06G02190.1.cds2NO06G02190.1.cds2Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO06G02190.1 ID=NO06G02190.1|Name=NO06G02190.1|organism=Nannochloropsis oceanica|type=mRNA|length=1458bp
ATGAGATCTACATCTCGTAGAAATCATGGCGGCGCTGTCCGTATGACAGC
TCATCGCTTGGAGCAGCGAGTCGTGCAGCAACGATTTCAAGAAACAAAAA
TTCAGAATATTCTTGCCTCGACAGCAGGAGATCGCATATTGAATTACACG
GCGGCATCCGAGGCCCGGATCATCAAACAGCGGGAGCACCAGGATGCCAA
GCGCGCGGCGGCGGCACGTGCCCTGGAGGAGGAAGCTCGTGCGATGGAGG
CAGAAAAGGAGGCCCAGCGACGGCAACAAGCCGAAAGTGAAGCCCGTATT
GCTGCGAAAGATGCTGAACGCAAACAGCGGGAGCAGAAGGAATGTGAGCT
CCAACGAATTTGCGAGACAAGCGACGAATTGCGGGAGTTGGAAAAAGCAT
TAGCCATTGCGTACATGAACAAGGAGCGTGCCGCTCAACACGAAGAGCGA
CAGCTGCTAGATCACTTGGACAAGGAATGGGCCATCCGCATCGATGAAGA
TATGGAAACACGTCGCCGGCTAGCGGTTCAGACGGATCGAGGTCGGGGAG
CCGACCCACGCTTTGATCGACAGATGTTGAAGGCAGACATCCAAAAGCAG
TTGGTGGAGCAAGAACGACGCCGTCAGGAGCTGGAGAGTGCCACCGCGGC
CCAAGACAAAGCATTGGTCCAAGCTGCAGTGAAACGCGCGCAGCAAGAAG
AAGCAGATCGGCATCGAGCATTGGCAAGGAAGAGGGAAGAGGTCCAGCAG
ATGCACCGCAAGCACGAGGAGGCGCGGGAGCGCATTCAGCGCGAGCAGCA
GCAGCGGGATGCAGAGGAGGAAGTACGTATTCAACACTACCAGGCCATGC
AAATTGCTCGCAAGAGCCACATTCGGCAACGGCAGGACGAACGCCGAGCG
AGGCAGGAAGCGGTAGTTGCCAAGATTGTTGCGGAGGCGAAGCAGAAGCA
AGCGGACGAGGAGGAATTGGAGACGTTGCGGACATTGCTGCACGCTGAGA
AAGCAGAAGCCTCACGCCTGGCAAGGGAGGAGGCGAAATGGATTAAAAAA
CAAAAAGATCGAGATGACCTCCGTCGCGCCCAGGAGGAGCAACTTAGGCT
CAAAGCCCGGCAAGTCGCCTGGGAGCGGGTGAGGGAGGAGAAGATGGTGG
CGGAGATGCAGGCCAAGTTCGAGGCCGAGAGTCGACGTGAGGCAGATATC
ACAGCACATCGAAGGCAGGCAGACGCCACGCATCAGATGCGATTGCGGGA
GCAGCTTGAAGACGGGCGGAGACGGGTGCAAGCGGAACACGCTTCTGAGC
ATGGGCCGAGCCGGGAGGAAGCTGCGAAGGAGGCGTACAAGCAACAAGTG
GTGACTGAAGCTCGTAGACGGCTATTGAAGGAGCATGCCTCATTATTAGG
AGAATTTTTACCGAAAAACTTGGCCAAGGAAGTCGAGGAAGGGAAGCGTT
GTGATTGA
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protein sequence of NO06G02190.1

>NO06G02190.1-protein ID=NO06G02190.1-protein|Name=NO06G02190.1|organism=Nannochloropsis oceanica|type=polypeptide|length=486bp
MRSTSRRNHGGAVRMTAHRLEQRVVQQRFQETKIQNILASTAGDRILNYT
AASEARIIKQREHQDAKRAAAARALEEEARAMEAEKEAQRRQQAESEARI
AAKDAERKQREQKECELQRICETSDELRELEKALAIAYMNKERAAQHEER
QLLDHLDKEWAIRIDEDMETRRRLAVQTDRGRGADPRFDRQMLKADIQKQ
LVEQERRRQELESATAAQDKALVQAAVKRAQQEEADRHRALARKREEVQQ
MHRKHEEARERIQREQQQRDAEEEVRIQHYQAMQIARKSHIRQRQDERRA
RQEAVVAKIVAEAKQKQADEEELETLRTLLHAEKAEASRLAREEAKWIKK
QKDRDDLRRAQEEQLRLKARQVAWERVREEKMVAEMQAKFEAESRREADI
TAHRRQADATHQMRLREQLEDGRRRVQAEHASEHGPSREEAAKEAYKQQV
VTEARRRLLKEHASLLGEFLPKNLAKEVEEGKRCD*
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mRNA from alignment at chr6:638733..640407-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO06G02190.1 ID=NO06G02190.1|Name=NO06G02190.1|organism=Nannochloropsis oceanica|type=mRNA|length=1675bp|location=Sequence derived from alignment at chr6:638733..640407- (Nannochloropsis oceanica)
ATGAGATCTACATCTCGTAGAAATCATGGCGGCGCTGTCCGTATGACAGC
TCATCGCTTGGAGCAGCGAGTCGTGCAGCAACGATTTCAAGAAACAAAAA
TTCAGGTTCATTGGCTTTGAAGGGAGAATGGGAAGACGCGAGTCGCAAAG
CATACATTTGTCACGCGGGGGTGCAATTTTCGATAATCAAACGAACTGCT
CTTCTTCTGCCTCGTATTTTAGACCCTATTAAAAATTGTCCTCTCCGGCT
CTTGTCCTTGTCAGCTACCTCACACCCTCCCCTCTCACCTCTCAATAACT
CCCTCCAACCCATCACCTCCAGAATATTCTTGCCTCGACAGCAGGAGATC
GCATATTGAATTACACGGCGGCATCCGAGGCCCGGATCATCAAACAGCGG
GAGCACCAGGATGCCAAGCGCGCGGCGGCGGCACGTGCCCTGGAGGAGGA
AGCTCGTGCGATGGAGGCAGAAAAGGAGGCCCAGCGACGGCAACAAGCCG
AAAGTGAAGCCCGTATTGCTGCGAAAGATGCTGAACGCAAACAGCGGGAG
CAGAAGGAATGTGAGCTCCAACGAATTTGCGAGACAAGCGACGAATTGCG
GGAGTTGGAAAAAGCATTAGCCATTGCGTACATGAACAAGGAGCGTGCCG
CTCAACACGAAGAGCGACAGCTGCTAGATCACTTGGACAAGGAATGGGCC
ATCCGCATCGATGAAGATATGGAAACACGTCGCCGGCTAGCGGTTCAGAC
GGATCGAGGTCGGGGAGCCGACCCACGCTTTGATCGACAGATGTTGAAGG
CAGACATCCAAAAGCAGTTGGTGGAGCAAGAACGACGCCGTCAGGAGCTG
GAGAGTGCCACCGCGGCCCAAGACAAAGCATTGGTCCAAGCTGCAGTGAA
ACGCGCGCAGCAAGAAGAAGCAGATCGGCATCGAGCATTGGCAAGGAAGA
GGGAAGAGGTCCAGCAGATGCACCGCAAGCACGAGGAGGCGCGGGAGCGC
ATTCAGCGCGAGCAGCAGCAGCGGGATGCAGAGGAGGAAGTACGTATTCA
ACACTACCAGGCCATGCAAATTGCTCGCAAGAGCCACATTCGGCAACGGC
AGGACGAACGCCGAGCGAGGCAGGAAGCGGTAGTTGCCAAGATTGTTGCG
GAGGCGAAGCAGAAGCAAGCGGACGAGGAGGAATTGGAGACGTTGCGGAC
ATTGCTGCACGCTGAGAAAGCAGAAGCCTCACGCCTGGCAAGGGAGGAGG
CGAAATGGATTAAAAAACAAAAAGATCGAGATGACCTCCGTCGCGCCCAG
GAGGAGCAACTTAGGCTCAAAGCCCGGCAAGTCGCCTGGGAGCGGGTGAG
GGAGGAGAAGATGGTGGCGGAGATGCAGGCCAAGTTCGAGGCCGAGAGTC
GACGTGAGGCAGATATCACAGCACATCGAAGGCAGGCAGACGCCACGCAT
CAGATGCGATTGCGGGAGCAGCTTGAAGACGGGCGGAGACGGGTGCAAGC
GGAACACGCTTCTGAGCATGGGCCGAGCCGGGAGGAAGCTGCGAAGGAGG
CGTACAAGCAACAAGTGGTGACTGAAGCTCGTAGACGGCTATTGAAGGAG
CATGCCTCATTATTAGGAGAATTTTTACCGAAAAACTTGGCCAAGGAAGT
CGAGGAAGGGAAGCGTTGTGATTGA
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Coding sequence (CDS) from alignment at chr6:638733..640407-

>NO06G02190.1 ID=NO06G02190.1|Name=NO06G02190.1|organism=Nannochloropsis oceanica|type=CDS|length=1458bp|location=Sequence derived from alignment at chr6:638733..640407- (Nannochloropsis oceanica)
ATGAGATCTACATCTCGTAGAAATCATGGCGGCGCTGTCCGTATGACAGC
TCATCGCTTGGAGCAGCGAGTCGTGCAGCAACGATTTCAAGAAACAAAAA
TTCAGAATATTCTTGCCTCGACAGCAGGAGATCGCATATTGAATTACACG
GCGGCATCCGAGGCCCGGATCATCAAACAGCGGGAGCACCAGGATGCCAA
GCGCGCGGCGGCGGCACGTGCCCTGGAGGAGGAAGCTCGTGCGATGGAGG
CAGAAAAGGAGGCCCAGCGACGGCAACAAGCCGAAAGTGAAGCCCGTATT
GCTGCGAAAGATGCTGAACGCAAACAGCGGGAGCAGAAGGAATGTGAGCT
CCAACGAATTTGCGAGACAAGCGACGAATTGCGGGAGTTGGAAAAAGCAT
TAGCCATTGCGTACATGAACAAGGAGCGTGCCGCTCAACACGAAGAGCGA
CAGCTGCTAGATCACTTGGACAAGGAATGGGCCATCCGCATCGATGAAGA
TATGGAAACACGTCGCCGGCTAGCGGTTCAGACGGATCGAGGTCGGGGAG
CCGACCCACGCTTTGATCGACAGATGTTGAAGGCAGACATCCAAAAGCAG
TTGGTGGAGCAAGAACGACGCCGTCAGGAGCTGGAGAGTGCCACCGCGGC
CCAAGACAAAGCATTGGTCCAAGCTGCAGTGAAACGCGCGCAGCAAGAAG
AAGCAGATCGGCATCGAGCATTGGCAAGGAAGAGGGAAGAGGTCCAGCAG
ATGCACCGCAAGCACGAGGAGGCGCGGGAGCGCATTCAGCGCGAGCAGCA
GCAGCGGGATGCAGAGGAGGAAGTACGTATTCAACACTACCAGGCCATGC
AAATTGCTCGCAAGAGCCACATTCGGCAACGGCAGGACGAACGCCGAGCG
AGGCAGGAAGCGGTAGTTGCCAAGATTGTTGCGGAGGCGAAGCAGAAGCA
AGCGGACGAGGAGGAATTGGAGACGTTGCGGACATTGCTGCACGCTGAGA
AAGCAGAAGCCTCACGCCTGGCAAGGGAGGAGGCGAAATGGATTAAAAAA
CAAAAAGATCGAGATGACCTCCGTCGCGCCCAGGAGGAGCAACTTAGGCT
CAAAGCCCGGCAAGTCGCCTGGGAGCGGGTGAGGGAGGAGAAGATGGTGG
CGGAGATGCAGGCCAAGTTCGAGGCCGAGAGTCGACGTGAGGCAGATATC
ACAGCACATCGAAGGCAGGCAGACGCCACGCATCAGATGCGATTGCGGGA
GCAGCTTGAAGACGGGCGGAGACGGGTGCAAGCGGAACACGCTTCTGAGC
ATGGGCCGAGCCGGGAGGAAGCTGCGAAGGAGGCGTACAAGCAACAAGTG
GTGACTGAAGCTCGTAGACGGCTATTGAAGGAGCATGCCTCATTATTAGG
AGAATTTTTACCGAAAAACTTGGCCAAGGAAGTCGAGGAAGGGAAGCGTT
GTGATTGA
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Synonyms
Publications