NO06G01050.1, NO06G01050.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO06G01050.1
Unique NameNO06G01050.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length297
Alignment locationchr6:338771..340016 -

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Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr6genomechr6:338771..340016 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO06G01050.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO06G01050NO06G01050Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO06G01050.1NO06G01050.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO06G01050.1.cds1NO06G01050.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO06G01050.1.cds2NO06G01050.1.cds2Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO06G01050.1.cds3NO06G01050.1.cds3Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO06G01050.1.cds4NO06G01050.1.cds4Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO06G01050.1 ID=NO06G01050.1|Name=NO06G01050.1|organism=Nannochloropsis oceanica|type=mRNA|length=297bp
ATGGCCGGACGTGGTGGGGAAAGAGCCGGCGAAAGCTCAGCACGAAGCCA
CAGTTCAAATCCTACGATCCGCCGCACCCGCTCAATGTCTATAAAGAGCA
CAAGCTGCGGAGAAGGTGTTGAGACAGGGGCATGGGGGGTGCAGCATGAG
TTTACTAATTGGAGATTTTGGAGCAGTCGACGAAGCCCTTGGAGGCAGAC
CTTGACCCGCCACAAGGAGGGCGCCACGACCCGAAGATTGCGAGTTGGGC
ATCACCTCGTTACGAGCCGCATTGGGCGAGAATGTGGGAAAGCCTAG
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protein sequence of NO06G01050.1

>NO06G01050.1-protein ID=NO06G01050.1-protein|Name=NO06G01050.1|organism=Nannochloropsis oceanica|type=polypeptide|length=99bp
MAGRGGERAGESSARSHSSNPTIRRTRSMSIKSTSCGEGVETGAWGVQHE
FTNWRFWSSRRSPWRQTLTRHKEGATTRRLRVGHHLVTSRIGRECGKA*
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mRNA from alignment at chr6:338771..340016-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO06G01050.1 ID=NO06G01050.1|Name=NO06G01050.1|organism=Nannochloropsis oceanica|type=mRNA|length=1246bp|location=Sequence derived from alignment at chr6:338771..340016- (Nannochloropsis oceanica)
ATGGCCGGACGTGGTGGGGAAAGAGCCGGCGAAAGCTCAGGTACTTCATA
TTCGCTTAGTTAAAATTTTGGCGGAAGAAAGTGCCCGCCTACGTTTTTGT
CAGGTGCATACGTTCACATATTACGCGTTTGATAGCACGAAGCCACAGTT
CAAATCCTACGATCCGCCGCACCCGCTCAATGTCTATAAAGAGCACAAGC
TGCGGAGAAGGTGTTGAGACAGGGGCATGGGGGGTGCAGGTATGTCGGTG
CGATAGGAGGGAGGGGGAGGCGAGGACATGGTATCAAATGCATGTAGACG
ACAATGAAATACTTGCATAGATAAGCGGCTTTCAAAGCTGCGTCGCGGAA
ACCGGACAAATTTGTCACCGGCATATCCACCTCTCCATCAACTTCCGGCT
GAAGCCCCTTCATTTCCGTCGAGCCAAGTCAAGCCAAGATGATTTCTTTT
TCCTTGATCGATACCAACGGGGGCTAAGCCGTTGCTGGATTGAAGAGTCT
TACTCGTCAAATCATACTTTCCCTCTATTCCGTCTCCCTTCCCCCCCTCA
CGAACTATGTGATCCTCCGCGTCCGCGTCTTGTATGGAGACAGCGTAGAC
CTGGCCGAATCCTCTATCACCCTTCCTCCTCACGGCGTTTTCCCCTTTTC
CTCTTTCTCTGAAAAGAGGGATAAGGCCAAAATTGGCAGGATAAAAATGG
GCTGCGCGCTATGCGACCCACACTGAAGACGTCGCTCGCGTGCTTGCTGT
CATGGTCGGCAAGTCCCTGCAGCAGCAGCACCACCACCACCACCACCATT
ACCAGCACCAACAGCAGCAGTAAAAGATGGAAGGAGTGCTGTAGGTTATT
TTTCACTTAAGTAGTAACGAGAAATGAAGCGAAAGAGAGGCGTATGAGAA
GGGAGGGAAGGCATACACGAACTATAGCATGAGTTTACTAATTGGAGATT
TTGGAGCAGTCGACGAAGCCCTTGGAGGCAGACCTTGACCCGCCACAAGG
AGGGCGCCACGACCCGAAGATTGTAAGTGGTGCGAGGAAGAAGGGGGGAA
GAGGAGAAGGAGGACGAGAAAAAGAAGAATAGAATGGACGGAAAAAGGAG
GGGTGAGATACGTAGGTTCGTCCTTTCGCTGGTTCACACCTCTCGTTGAC
CTCCCGTCCGCTCCTTTTGTTACCATGCATCATGACAGGCGAGTTGGGCA
TCACCTCGTTACGAGCCGCATTGGGCGAGAATGTGGGAAAGCCTAG
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Coding sequence (CDS) from alignment at chr6:338771..340016-

>NO06G01050.1 ID=NO06G01050.1|Name=NO06G01050.1|organism=Nannochloropsis oceanica|type=CDS|length=297bp|location=Sequence derived from alignment at chr6:338771..340016- (Nannochloropsis oceanica)
ATGGCCGGACGTGGTGGGGAAAGAGCCGGCGAAAGCTCAGCACGAAGCCA
CAGTTCAAATCCTACGATCCGCCGCACCCGCTCAATGTCTATAAAGAGCA
CAAGCTGCGGAGAAGGTGTTGAGACAGGGGCATGGGGGGTGCAGCATGAG
TTTACTAATTGGAGATTTTGGAGCAGTCGACGAAGCCCTTGGAGGCAGAC
CTTGACCCGCCACAAGGAGGGCGCCACGACCCGAAGATTGCGAGTTGGGC
ATCACCTCGTTACGAGCCGCATTGGGCGAGAATGTGGGAAAGCCTAG
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Synonyms
Publications