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Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| chr6 | genome | chr6:224831..228898 + |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
BLAST of NO06G00580.1 vs.
Match: EWM26144.1 (rpot-like rna polymerase [Nannochloropsis gaditana]) HSP 1 Score: 1508.8 bits (3905), Expect = 0.000e+0 Identity = 807/1168 (69.09%), Postives = 916/1168 (78.42%), Query Frame = 0
Query: 1 MLRAGFFKSCGCERIRHDVLASS---ITQPPLHHQQRRAMAAARRLLDRMVPA---AVAMPTSTTPIEARSIQAQASAVTSTDPTELSSAHNATGNSGRGNGRDNSSGSFKELYQVLKQQQDLDVIRRRLQQQGHPLLPPTIESLRDQAAAMMCEARHSHQVDFTRQQDAVVSE-GVEQSSVSMYGEANEMAFFLDEIEEDFYSVSSSPSSSGSMPQQQQQQQQQQQQHLIPNEHLSPIETEQERMHRLEIQLEQGTIAEALAEYKEVQDTLFSSGKAANLPVVKRQIFAWYAPMITAMEVLHCKLREGKWADLGNGVGTYGPFLALVSPEKLAVLTIHETINLIVRHGNQGVPLALLLLHIADAVRTEVNFLRLTETYGDRVLNTLRENGTISMKRVNRKAREALEDGLWHPDLKIKVGGMLLNELHRVAKASPELWA----EAEGEVGATSVMEKKREWRDDRRYQQQQLQQVRDAAAARAAAVTAGNPLPPPSPLSLIEDHERPPAFHIELETTRKLKKRGLLFLDDATYRSMVASDDLQNYLTPRYRPMLVEPRPWHALDSGGYVQLKSYVVRSQNCKAQFEALRRASMPEVYGALNFLGRVPWVINADVLDTIQEAYSRGLTVGDLPSKKDLTLPSFPSSLASVAEEEGEFLAQAEPTAAAAGGGEESDVEGRRSRDRALLRERIQFAQRVKKRNAELFSLRCDTEIKLRIAQEFRQHTFYFPYNLDFRGRAYPVPPNLNHLGSDMCRGMLRFADKRALGKDGIRWLKIHLANLCGKDKLSFEGRVKYVEGKMEEIYDSAARPLDGKGWWQKAEEPWQALAVCKEIVAALESGDVEGFLSGVPVHMDGSCNGLQHYAALGRDEEGAKQVNLIHSEVPQDVYTGVCDRVVKHVHAEAVKTLPRTATEEERRQQRCAQLVDGVINRKVVKQTVMTSVYGVTYIGARKQIQARLKEKLQEREGGRMLTKEEEQDVYEASRYVATVTLSKLAELFSAARNIMEWLATCASLVAKQGQPMSWVTPLGLPVIQPYRRDKGLLVKTLIQSVILIDCNDKLPVSSARQRSAFPPNFVHSLDSTHMLMTANKLQALDIPFTAVHDSYWCHASNVDTMNASLRDCFVDLYEQPVLENLRDSLVARFPDVEFPAIPQRGALKLDEVKDSPYFFD 1158
MLRAG KS G + R+ ++ I++ H RAMAAARRL DR + A +PTS+ EARSIQAQAS TS D +S NA +S R NS+ SFKELY VLKQQQ++D+++RRL+Q P+LPPTIESLRDQAAA+M R +E G +S + GEANE AFFLDEIEED Y S G + QQ ++HL P+ S + T++E++ LE+ E+GTI+EALAEYKEVQDTLF +GKAA LPVVKRQIFAWY PMI AM LH KLREGKW+DLGNGVGTYGPFL LV P+KLAV+T++ET+NLI+RHGNQGVPL +LLLHIADAVRTEVNFLRL+ETYGDRVLN LRENG IS+KRVNRKAREALEDG+W DLKIKVGGMLL+ELHRVAK SPE EA G G +++ R Q +L Q A A + A S + ERPPA I LE+T +KKRGL+FLD+A YRSM + D+Q+YLTPRYRPM+V+PRPW + DSGGY+QLKS++VRSQN KAQF+ALR A MPEVY ALNFLGRVPWVIN +VL TIQEAY+RGLTVGDLPS+ D +P + P A G EE V GRR+ +R LLR+R Q A+RVKKRNAELFSLRCDTEIKL IA+EFR HTFYFPYNLDFRGRAYPVPPNLNHLGSDMCRGMLRFA+KR LGK+G+RWLKIHLANLCG+DKLSF+ RV +VE KME + DSAARPL+G+GWWQKAEEPWQALAVCKEIVAA+ESGD E FLSGVPVHMDGSCNGLQHYAALGRDEEGAKQVNLIHS VP+DVYTGVCDRV+KHVH+EA + L RTATEEERRQQR A+LVDG+INRKVVKQTVMTSVYGVTY+GARKQIQARLKEK QERE GRMLTKEEEQ+VYEASRYVAT+TLSKLAELFSAARNIMEWL+TCASLVA+QGQPMSWVTPLGLPVIQPYRRDKGLLVKTLIQSVIL+DCNDKLPVSS+RQRSAFPPNFVHSLDSTHMLMTAN+LQ L +PFTAVHDSYWCHASNV+ MNA+LR+CF+ LYEQPVLE LRDSLVARFPDV FP IPQRG L+L+EVKDSPYFFD
Sbjct: 1 MLRAGCAKSYG--KGRYHLVGQGLPIISKSRPHGVPLRAMAAARRLWDRTTVSNSVASILPTSSPSFEARSIQAQASVFTS-DSAIISDCGNALESSSTETRRANSTDSFKELYHVLKQQQEMDILQRRLRQGDQPMLPPTIESLRDQAAALMRPGWAEEGGARVRGVSGRDTEAGGRSNSNMLIGEANETAFFLDEIEEDMYPPLGPESVQGG---GSHEGLQQIKEHLAPHARPSSVNTKREQLRNLEVAFEEGTISEALAEYKEVQDTLFRTGKAAYLPVVKRQIFAWYGPMIEAMTALHAKLREGKWSDLGNGVGTYGPFLILVPPDKLAVITVNETVNLILRHGNQGVPLTMLLLHIADAVRTEVNFLRLSETYGDRVLNILRENGMISLKRVNRKAREALEDGVWRADLKIKVGGMLLSELHRVAKISPECLLDGAKEAHGLEGPEVGPGREKSLEKRMRLQAPRLDQAGGGAEGGADSTDALT--------SANREVERPPALSIALESTHSIKKRGLVFLDEAVYRSMAGAADVQHYLTPRYRPMVVQPRPWKSFDSGGYLQLKSFIVRSQNSKAQFDALRGARMPEVYHALNFLGRVPWVINGEVLSTIQEAYARGLTVGDLPSQLDELVPPLSGHPS-----------HPPPADPALLGAEEDGVPGRRAEERRLLRDRWQIARRVKKRNAELFSLRCDTEIKLGIAEEFRNHTFYFPYNLDFRGRAYPVPPNLNHLGSDMCRGMLRFAEKRPLGKNGLRWLKIHLANLCGQDKLSFDDRVAFVEEKMENVQDSAARPLNGQGWWQKAEEPWQALAVCKEIVAAVESGDPESFLSGVPVHMDGSCNGLQHYAALGRDEEGAKQVNLIHSAVPRDVYTGVCDRVIKHVHSEATRALGRTATEEERRQQRHARLVDGLINRKVVKQTVMTSVYGVTYVGARKQIQARLKEKFQEREKGRMLTKEEEQEVYEASRYVATITLSKLAELFSAARNIMEWLSTCASLVARQGQPMSWVTPLGLPVIQPYRRDKGLLVKTLIQSVILVDCNDKLPVSSSRQRSAFPPNFVHSLDSTHMLMTANRLQGLGVPFTAVHDSYWCHASNVEVMNATLRECFITLYEQPVLEALRDSLVARFPDVAFPPIPQRGKLRLEEVKDSPYFFD 1143
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO06G00580.1 ID=NO06G00580.1|Name=NO06G00580.1|organism=Nannochloropsis oceanica|type=mRNA|length=3873bp
ACAGGTGCGAAGGCCGTGGAGGGAGGGAGGGGACTGGCCAGATAAACAGC
ACACATAATCTGCGACGGCCAGCATTCCACATCATCACCACAACAGCCAC
CTACCTAATAGAGGAGCAGCCACCCTATCAGCAGCCATGCTGCGCGCAGG
CTTCTTCAAGAGCTGTGGCTGCGAACGCATACGACACGACGTGCTAGCCA
GCAGCATTACTCAGCCACCTTTGCACCACCAACAACGACGGGCCATGGCC
GCAGCAAGACGCCTCTTGGACCGGATGGTGCCAGCCGCTGTCGCCATGCC
CACCTCCACAACCCCGATCGAGGCCCGCTCCATCCAAGCCCAGGCCTCGG
CGGTCACCTCCACTGACCCTACTGAGCTCTCCAGCGCCCACAATGCCACC
GGAAACAGCGGCCGGGGAAATGGCAGGGATAACAGTAGCGGCTCTTTCAA
GGAACTCTATCAAGTGCTCAAGCAACAGCAAGACCTGGATGTCATACGCC
GACGCCTCCAGCAGCAAGGCCACCCGTTGCTGCCTCCTACTATTGAGAGC
CTGCGGGATCAGGCAGCTGCTATGATGTGCGAGGCGAGGCACAGCCACCA
AGTAGATTTTACGAGGCAGCAAGACGCAGTAGTGAGCGAGGGAGTGGAGC
AGAGTAGCGTGAGCATGTATGGGGAGGCGAACGAGATGGCATTTTTCTTG
GACGAAATCGAAGAAGACTTTTATTCTGTATCATCCTCCCCTTCCTCGTC
AGGCAGCATGCCTCAGCAGCAGCAGCAGCAGCAACAACAACAACAGCAGC
ACCTCATTCCGAACGAGCACCTTTCCCCCATCGAAACCGAACAAGAGCGC
ATGCACCGGTTAGAAATCCAGTTGGAGCAAGGAACTATCGCCGAAGCCCT
GGCCGAATACAAGGAAGTGCAAGATACACTGTTTAGCTCGGGGAAAGCTG
CAAATCTGCCTGTGGTCAAGCGCCAGATCTTCGCCTGGTACGCCCCCATG
ATCACGGCCATGGAGGTCCTGCACTGCAAGCTCCGCGAAGGCAAATGGGC
TGATTTGGGCAACGGCGTGGGCACCTACGGCCCTTTTCTGGCCCTCGTCT
CCCCTGAGAAGCTAGCCGTGCTGACCATTCACGAGACCATCAATCTTATC
GTCCGCCACGGCAACCAAGGCGTGCCTCTTGCCTTGCTCCTCCTCCACAT
CGCCGACGCCGTCCGGACCGAAGTAAACTTCCTTCGGCTCACCGAGACGT
ACGGTGATCGGGTCCTCAATACCTTGAGGGAGAATGGGACGATCAGCATG
AAGCGTGTGAATAGGAAGGCACGCGAAGCCCTGGAGGACGGGCTTTGGCA
CCCGGACTTGAAGATCAAGGTGGGGGGCATGCTCCTCAACGAGCTCCACC
GCGTGGCCAAGGCATCCCCCGAGCTGTGGGCCGAGGCAGAAGGGGAGGTA
GGGGCAACTTCAGTGATGGAGAAAAAGAGGGAGTGGAGAGACGACCGACG
GTATCAGCAACAGCAGCTGCAGCAAGTCCGGGACGCGGCGGCGGCGCGGG
CAGCAGCCGTTACTGCGGGAAATCCTCTCCCTCCTCCTTCCCCTCTCTCG
CTGATAGAGGACCATGAGCGCCCTCCTGCCTTTCACATCGAACTGGAGAC
TACTCGGAAGCTAAAAAAGCGGGGCTTGCTTTTCCTGGACGACGCCACCT
ACCGCAGCATGGTTGCGTCAGACGACTTGCAAAACTACCTCACCCCGCGG
TACCGGCCCATGTTGGTCGAGCCCCGTCCTTGGCATGCCCTCGACTCGGG
GGGCTACGTCCAACTCAAGTCGTACGTGGTCCGCTCTCAAAACTGCAAGG
CGCAGTTCGAGGCGCTGCGACGGGCGTCCATGCCTGAGGTGTATGGGGCC
CTCAACTTTTTGGGACGTGTCCCATGGGTGATCAATGCGGATGTGCTCGA
TACCATTCAAGAGGCCTATTCCCGTGGACTTACTGTCGGAGATTTGCCCA
GCAAGAAGGACCTGACCCTCCCCTCCTTCCCTTCCTCCCTCGCTTCCGTC
GCCGAAGAGGAGGGGGAGTTCCTGGCCCAGGCAGAGCCAACAGCAGCAGC
AGCAGGAGGCGGAGAAGAAAGCGACGTTGAAGGCCGACGTTCCCGAGACC
GTGCCCTCCTCCGAGAGCGTATTCAATTTGCCCAACGTGTCAAGAAACGC
AACGCTGAGCTCTTCTCTCTCCGATGCGACACGGAAATCAAGCTCCGCAT
CGCCCAGGAGTTCCGACAGCACACCTTCTACTTCCCTTACAACCTCGACT
TCCGAGGCCGGGCTTATCCTGTCCCTCCCAATTTAAACCACCTGGGCTCG
GATATGTGCCGGGGTATGTTGAGATTCGCAGACAAGAGGGCGCTGGGAAA
GGACGGAATTCGGTGGCTGAAGATTCATCTGGCCAACTTGTGTGGGAAGG
ACAAGTTGTCGTTTGAGGGGCGTGTAAAGTACGTGGAAGGGAAAATGGAG
GAGATCTACGACTCGGCCGCGCGGCCGCTGGACGGAAAGGGATGGTGGCA
GAAGGCGGAGGAGCCCTGGCAGGCCTTGGCGGTATGTAAGGAGATCGTGG
CAGCGTTGGAGAGTGGGGACGTTGAGGGGTTTCTGTCGGGCGTACCGGTG
CACATGGACGGGTCGTGTAATGGGCTGCAGCACTACGCGGCACTGGGGAG
GGACGAGGAGGGGGCGAAGCAGGTGAATCTTATCCACTCGGAGGTGCCCC
AGGACGTGTATACCGGGGTGTGCGATCGAGTGGTGAAGCATGTCCATGCC
GAGGCCGTGAAGACTTTGCCTCGCACGGCGACGGAGGAGGAGAGGAGGCA
GCAGCGATGCGCTCAGTTGGTGGATGGGGTGATCAATAGGAAGGTGGTGA
AACAGACGGTCATGACGAGTGTATATGGCGTCACCTACATCGGTGCCCGC
AAGCAGATCCAGGCGAGACTGAAAGAGAAATTACAGGAGCGGGAGGGAGG
GCGGATGCTGACCAAGGAGGAGGAGCAAGACGTCTACGAGGCCTCGAGAT
ACGTAGCAACCGTCACTCTATCCAAGCTAGCGGAGCTCTTCTCTGCAGCA
CGAAACATCATGGAATGGCTGGCAACGTGCGCCAGTCTAGTGGCCAAGCA
GGGGCAGCCCATGTCGTGGGTCACCCCCCTTGGCCTCCCTGTCATTCAGC
CCTACCGGCGCGACAAGGGCCTGTTGGTCAAGACCCTGATTCAGAGCGTC
ATCCTAATTGATTGTAACGACAAACTGCCTGTCTCCTCCGCCCGGCAGCG
CTCTGCCTTCCCCCCCAATTTTGTTCACTCCCTGGACTCGACCCACATGC
TTATGACGGCCAACAAGCTGCAGGCCCTCGACATCCCCTTCACGGCCGTG
CACGACAGCTACTGGTGTCACGCGAGCAATGTAGACACCATGAACGCCTC
CCTCCGCGACTGTTTCGTCGACCTGTACGAGCAGCCCGTCCTCGAAAACC
TGCGGGACTCTCTCGTAGCTCGTTTCCCGGACGTGGAGTTCCCAGCCATC
CCCCAGCGAGGCGCGCTAAAGCTGGACGAGGTGAAGGACTCGCCCTACTT
CTTCGATTAGATGTTGAGGGGTAAGGAGGAAGAGAGGAAGAGAGGAAGAG
AGGGCATGAAGGAACTTGTATAGCTAGAGTCTGGGGCTATAGCGATGACA
CTGGAAAAACAGAAATCGAGAGGGAAGAGATTCGTGAGATCGATAAGAAA
CTCACTTACAACGACGACCACCATTACCTTTGTGCCCACAAACGCAAGTA
AGCAAATGTTAAATAATTACAGGAAATGGGAAGACGACCCAAAAGAAATG
AATGCTCCACTTAAATTCCAGCG back to topprotein sequence of NO06G00580.1 >NO06G00580.1-protein ID=NO06G00580.1-protein|Name=NO06G00580.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1158bp
MLRAGFFKSCGCERIRHDVLASSITQPPLHHQQRRAMAAARRLLDRMVPA
AVAMPTSTTPIEARSIQAQASAVTSTDPTELSSAHNATGNSGRGNGRDNS
SGSFKELYQVLKQQQDLDVIRRRLQQQGHPLLPPTIESLRDQAAAMMCEA
RHSHQVDFTRQQDAVVSEGVEQSSVSMYGEANEMAFFLDEIEEDFYSVSS
SPSSSGSMPQQQQQQQQQQQQHLIPNEHLSPIETEQERMHRLEIQLEQGT
IAEALAEYKEVQDTLFSSGKAANLPVVKRQIFAWYAPMITAMEVLHCKLR
EGKWADLGNGVGTYGPFLALVSPEKLAVLTIHETINLIVRHGNQGVPLAL
LLLHIADAVRTEVNFLRLTETYGDRVLNTLRENGTISMKRVNRKAREALE
DGLWHPDLKIKVGGMLLNELHRVAKASPELWAEAEGEVGATSVMEKKREW
RDDRRYQQQQLQQVRDAAAARAAAVTAGNPLPPPSPLSLIEDHERPPAFH
IELETTRKLKKRGLLFLDDATYRSMVASDDLQNYLTPRYRPMLVEPRPWH
ALDSGGYVQLKSYVVRSQNCKAQFEALRRASMPEVYGALNFLGRVPWVIN
ADVLDTIQEAYSRGLTVGDLPSKKDLTLPSFPSSLASVAEEEGEFLAQAE
PTAAAAGGGEESDVEGRRSRDRALLRERIQFAQRVKKRNAELFSLRCDTE
IKLRIAQEFRQHTFYFPYNLDFRGRAYPVPPNLNHLGSDMCRGMLRFADK
RALGKDGIRWLKIHLANLCGKDKLSFEGRVKYVEGKMEEIYDSAARPLDG
KGWWQKAEEPWQALAVCKEIVAALESGDVEGFLSGVPVHMDGSCNGLQHY
AALGRDEEGAKQVNLIHSEVPQDVYTGVCDRVVKHVHAEAVKTLPRTATE
EERRQQRCAQLVDGVINRKVVKQTVMTSVYGVTYIGARKQIQARLKEKLQ
EREGGRMLTKEEEQDVYEASRYVATVTLSKLAELFSAARNIMEWLATCAS
LVAKQGQPMSWVTPLGLPVIQPYRRDKGLLVKTLIQSVILIDCNDKLPVS
SARQRSAFPPNFVHSLDSTHMLMTANKLQALDIPFTAVHDSYWCHASNVD
TMNASLRDCFVDLYEQPVLENLRDSLVARFPDVEFPAIPQRGALKLDEVK
DSPYFFD* back to topmRNA from alignment at chr6:224831..228898+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO06G00580.1 ID=NO06G00580.1|Name=NO06G00580.1|organism=Nannochloropsis oceanica|type=mRNA|length=4068bp|location=Sequence derived from alignment at chr6:224831..228898+ (Nannochloropsis oceanica)
ACAGGTGCGAAGGCCGTGGAGGGAGGGAGGGGACTGGCCAGATAAACAGC
ACACATAATCTGCGACGGCCAGCATTCCACATCATCACCACAACAGCCAC
CTACCTAATAGAGGAGCAGCCACCCTATCAGCAGCCATGCTGCGCGCAGG
CTTCTTCAAGAGCTGTGGCTGCGAACGCATACGACACGACGTGCTAGCCA
GCAGCATTACTCAGCCACCTTTGCACCACCAACAACGACGGGCCATGGCC
GCAGCAAGACGCCTCTTGGACCGGATGGTGCCAGCCGCTGTCGCCATGCC
CACCTCCACAACCCCGATCGAGGCCCGCTCCATCCAAGCCCAGGCCTCGG
CGGTCACCTCCACTGACCCTACTGAGCTCTCCAGCGCCCACAATGCCACC
GGAAACAGCGGCCGGGGAAATGGCAGGGATAACAGTAGCGGCTCTTTCAA
GGAACTCTATCAAGTGCTCAAGCAACAGCAAGACCTGGATGTCATACGCC
GACGCCTCCAGCAGCAAGGCCACCCGTTGCTGCCTCCTACTATTGAGAGC
CTGCGGGATCAGGCAGCTGCTATGATGTGCGAGGCGAGGCACAGCCACCA
AGTAGATTTTACGAGGCAGCAAGACGCAGTAGTGAGCGAGGGAGTGGAGC
AGAGTAGCGTGAGCATGTATGGGGAGGCGAACGAGATGGCATTTTTCTTG
GACGAAATCGAAGAAGACTTTTATTCTGTATCATCCTCCCCTTCCTCGTC
AGGCAGCATGCCTCAGCAGCAGCAGCAGCAGCAACAACAACAACAGCAGC
ACCTCATTCCGAACGAGCACCTTTCCCCCATCGAAACCGAACAAGAGCGC
ATGCACCGGTTAGAAATCCAGTTGGAGCAAGGAACTATCGCCGAAGCCCT
GGCCGAATACAAGGAAGTGCAAGATACACTGTTTAGCTCGGGGAAAGCTG
CAAATCTGCCTGTGGTCAAGCGCCAGATCTTCGCCTGGTACGTTGAAGCT
AGCGCACTGGACGGGTCCTTCCATGGAAGAGATGTAAAGCGAAGCCGACC
TGCCTTGCCCTTATTGCTGTTGTTATCGTTACGCTACTTGTACACCCGTC
CTTACTGACCATTGTCTTGAGTAACTTTTAGATTTTTCATATTCGCCCTT
CCTCCTTCCCCTCCCCCCTTTCCCTCCCTTAGGTACGCCCCCATGATCAC
GGCCATGGAGGTCCTGCACTGCAAGCTCCGCGAAGGCAAATGGGCTGATT
TGGGCAACGGCGTGGGCACCTACGGCCCTTTTCTGGCCCTCGTCTCCCCT
GAGAAGCTAGCCGTGCTGACCATTCACGAGACCATCAATCTTATCGTCCG
CCACGGCAACCAAGGCGTGCCTCTTGCCTTGCTCCTCCTCCACATCGCCG
ACGCCGTCCGGACCGAAGTAAACTTCCTTCGGCTCACCGAGACGTACGGT
GATCGGGTCCTCAATACCTTGAGGGAGAATGGGACGATCAGCATGAAGCG
TGTGAATAGGAAGGCACGCGAAGCCCTGGAGGACGGGCTTTGGCACCCGG
ACTTGAAGATCAAGGTGGGGGGCATGCTCCTCAACGAGCTCCACCGCGTG
GCCAAGGCATCCCCCGAGCTGTGGGCCGAGGCAGAAGGGGAGGTAGGGGC
AACTTCAGTGATGGAGAAAAAGAGGGAGTGGAGAGACGACCGACGGTATC
AGCAACAGCAGCTGCAGCAAGTCCGGGACGCGGCGGCGGCGCGGGCAGCA
GCCGTTACTGCGGGAAATCCTCTCCCTCCTCCTTCCCCTCTCTCGCTGAT
AGAGGACCATGAGCGCCCTCCTGCCTTTCACATCGAACTGGAGACTACTC
GGAAGCTAAAAAAGCGGGGCTTGCTTTTCCTGGACGACGCCACCTACCGC
AGCATGGTTGCGTCAGACGACTTGCAAAACTACCTCACCCCGCGGTACCG
GCCCATGTTGGTCGAGCCCCGTCCTTGGCATGCCCTCGACTCGGGGGGCT
ACGTCCAACTCAAGTCGTACGTGGTCCGCTCTCAAAACTGCAAGGCGCAG
TTCGAGGCGCTGCGACGGGCGTCCATGCCTGAGGTGTATGGGGCCCTCAA
CTTTTTGGGACGTGTCCCATGGGTGATCAATGCGGATGTGCTCGATACCA
TTCAAGAGGCCTATTCCCGTGGACTTACTGTCGGAGATTTGCCCAGCAAG
AAGGACCTGACCCTCCCCTCCTTCCCTTCCTCCCTCGCTTCCGTCGCCGA
AGAGGAGGGGGAGTTCCTGGCCCAGGCAGAGCCAACAGCAGCAGCAGCAG
GAGGCGGAGAAGAAAGCGACGTTGAAGGCCGACGTTCCCGAGACCGTGCC
CTCCTCCGAGAGCGTATTCAATTTGCCCAACGTGTCAAGAAACGCAACGC
TGAGCTCTTCTCTCTCCGATGCGACACGGAAATCAAGCTCCGCATCGCCC
AGGAGTTCCGACAGCACACCTTCTACTTCCCTTACAACCTCGACTTCCGA
GGCCGGGCTTATCCTGTCCCTCCCAATTTAAACCACCTGGGCTCGGATAT
GTGCCGGGGTATGTTGAGATTCGCAGACAAGAGGGCGCTGGGAAAGGACG
GAATTCGGTGGCTGAAGATTCATCTGGCCAACTTGTGTGGGAAGGACAAG
TTGTCGTTTGAGGGGCGTGTAAAGTACGTGGAAGGGAAAATGGAGGAGAT
CTACGACTCGGCCGCGCGGCCGCTGGACGGAAAGGGATGGTGGCAGAAGG
CGGAGGAGCCCTGGCAGGCCTTGGCGGTATGTAAGGAGATCGTGGCAGCG
TTGGAGAGTGGGGACGTTGAGGGGTTTCTGTCGGGCGTACCGGTGCACAT
GGACGGGTCGTGTAATGGGCTGCAGCACTACGCGGCACTGGGGAGGGACG
AGGAGGGGGCGAAGCAGGTGAATCTTATCCACTCGGAGGTGCCCCAGGAC
GTGTATACCGGGGTGTGCGATCGAGTGGTGAAGCATGTCCATGCCGAGGC
CGTGAAGACTTTGCCTCGCACGGCGACGGAGGAGGAGAGGAGGCAGCAGC
GATGCGCTCAGTTGGTGGATGGGGTGATCAATAGGAAGGTGGTGAAACAG
ACGGTCATGACGAGTGTATATGGCGTCACCTACATCGGTGCCCGCAAGCA
GATCCAGGCGAGACTGAAAGAGAAATTACAGGAGCGGGAGGGAGGGCGGA
TGCTGACCAAGGAGGAGGAGCAAGACGTCTACGAGGCCTCGAGATACGTA
GCAACCGTCACTCTATCCAAGCTAGCGGAGCTCTTCTCTGCAGCACGAAA
CATCATGGAATGGCTGGCAACGTGCGCCAGTCTAGTGGCCAAGCAGGGGC
AGCCCATGTCGTGGGTCACCCCCCTTGGCCTCCCTGTCATTCAGCCCTAC
CGGCGCGACAAGGGCCTGTTGGTCAAGACCCTGATTCAGAGCGTCATCCT
AATTGATTGTAACGACAAACTGCCTGTCTCCTCCGCCCGGCAGCGCTCTG
CCTTCCCCCCCAATTTTGTTCACTCCCTGGACTCGACCCACATGCTTATG
ACGGCCAACAAGCTGCAGGCCCTCGACATCCCCTTCACGGCCGTGCACGA
CAGCTACTGGTGTCACGCGAGCAATGTAGACACCATGAACGCCTCCCTCC
GCGACTGTTTCGTCGACCTGTACGAGCAGCCCGTCCTCGAAAACCTGCGG
GACTCTCTCGTAGCTCGTTTCCCGGACGTGGAGTTCCCAGCCATCCCCCA
GCGAGGCGCGCTAAAGCTGGACGAGGTGAAGGACTCGCCCTACTTCTTCG
ATTAGATGTTGAGGGGTAAGGAGGAAGAGAGGAAGAGAGGAAGAGAGGGC
ATGAAGGAACTTGTATAGCTAGAGTCTGGGGCTATAGCGATGACACTGGA
AAAACAGAAATCGAGAGGGAAGAGATTCGTGAGATCGATAAGAAACTCAC
TTACAACGACGACCACCATTACCTTTGTGCCCACAAACGCAAGTAAGCAA
ATGTTAAATAATTACAGGAAATGGGAAGACGACCCAAAAGAAATGAATGC
TCCACTTAAATTCCAGCG back to topCoding sequence (CDS) from alignment at chr6:224831..228898+ >NO06G00580.1 ID=NO06G00580.1|Name=NO06G00580.1|organism=Nannochloropsis oceanica|type=CDS|length=3474bp|location=Sequence derived from alignment at chr6:224831..228898+ (Nannochloropsis oceanica)
ATGCTGCGCGCAGGCTTCTTCAAGAGCTGTGGCTGCGAACGCATACGACA
CGACGTGCTAGCCAGCAGCATTACTCAGCCACCTTTGCACCACCAACAAC
GACGGGCCATGGCCGCAGCAAGACGCCTCTTGGACCGGATGGTGCCAGCC
GCTGTCGCCATGCCCACCTCCACAACCCCGATCGAGGCCCGCTCCATCCA
AGCCCAGGCCTCGGCGGTCACCTCCACTGACCCTACTGAGCTCTCCAGCG
CCCACAATGCCACCGGAAACAGCGGCCGGGGAAATGGCAGGGATAACAGT
AGCGGCTCTTTCAAGGAACTCTATCAAGTGCTCAAGCAACAGCAAGACCT
GGATGTCATACGCCGACGCCTCCAGCAGCAAGGCCACCCGTTGCTGCCTC
CTACTATTGAGAGCCTGCGGGATCAGGCAGCTGCTATGATGTGCGAGGCG
AGGCACAGCCACCAAGTAGATTTTACGAGGCAGCAAGACGCAGTAGTGAG
CGAGGGAGTGGAGCAGAGTAGCGTGAGCATGTATGGGGAGGCGAACGAGA
TGGCATTTTTCTTGGACGAAATCGAAGAAGACTTTTATTCTGTATCATCC
TCCCCTTCCTCGTCAGGCAGCATGCCTCAGCAGCAGCAGCAGCAGCAACA
ACAACAACAGCAGCACCTCATTCCGAACGAGCACCTTTCCCCCATCGAAA
CCGAACAAGAGCGCATGCACCGGTTAGAAATCCAGTTGGAGCAAGGAACT
ATCGCCGAAGCCCTGGCCGAATACAAGGAAGTGCAAGATACACTGTTTAG
CTCGGGGAAAGCTGCAAATCTGCCTGTGGTCAAGCGCCAGATCTTCGCCT
GGTACGCCCCCATGATCACGGCCATGGAGGTCCTGCACTGCAAGCTCCGC
GAAGGCAAATGGGCTGATTTGGGCAACGGCGTGGGCACCTACGGCCCTTT
TCTGGCCCTCGTCTCCCCTGAGAAGCTAGCCGTGCTGACCATTCACGAGA
CCATCAATCTTATCGTCCGCCACGGCAACCAAGGCGTGCCTCTTGCCTTG
CTCCTCCTCCACATCGCCGACGCCGTCCGGACCGAAGTAAACTTCCTTCG
GCTCACCGAGACGTACGGTGATCGGGTCCTCAATACCTTGAGGGAGAATG
GGACGATCAGCATGAAGCGTGTGAATAGGAAGGCACGCGAAGCCCTGGAG
GACGGGCTTTGGCACCCGGACTTGAAGATCAAGGTGGGGGGCATGCTCCT
CAACGAGCTCCACCGCGTGGCCAAGGCATCCCCCGAGCTGTGGGCCGAGG
CAGAAGGGGAGGTAGGGGCAACTTCAGTGATGGAGAAAAAGAGGGAGTGG
AGAGACGACCGACGGTATCAGCAACAGCAGCTGCAGCAAGTCCGGGACGC
GGCGGCGGCGCGGGCAGCAGCCGTTACTGCGGGAAATCCTCTCCCTCCTC
CTTCCCCTCTCTCGCTGATAGAGGACCATGAGCGCCCTCCTGCCTTTCAC
ATCGAACTGGAGACTACTCGGAAGCTAAAAAAGCGGGGCTTGCTTTTCCT
GGACGACGCCACCTACCGCAGCATGGTTGCGTCAGACGACTTGCAAAACT
ACCTCACCCCGCGGTACCGGCCCATGTTGGTCGAGCCCCGTCCTTGGCAT
GCCCTCGACTCGGGGGGCTACGTCCAACTCAAGTCGTACGTGGTCCGCTC
TCAAAACTGCAAGGCGCAGTTCGAGGCGCTGCGACGGGCGTCCATGCCTG
AGGTGTATGGGGCCCTCAACTTTTTGGGACGTGTCCCATGGGTGATCAAT
GCGGATGTGCTCGATACCATTCAAGAGGCCTATTCCCGTGGACTTACTGT
CGGAGATTTGCCCAGCAAGAAGGACCTGACCCTCCCCTCCTTCCCTTCCT
CCCTCGCTTCCGTCGCCGAAGAGGAGGGGGAGTTCCTGGCCCAGGCAGAG
CCAACAGCAGCAGCAGCAGGAGGCGGAGAAGAAAGCGACGTTGAAGGCCG
ACGTTCCCGAGACCGTGCCCTCCTCCGAGAGCGTATTCAATTTGCCCAAC
GTGTCAAGAAACGCAACGCTGAGCTCTTCTCTCTCCGATGCGACACGGAA
ATCAAGCTCCGCATCGCCCAGGAGTTCCGACAGCACACCTTCTACTTCCC
TTACAACCTCGACTTCCGAGGCCGGGCTTATCCTGTCCCTCCCAATTTAA
ACCACCTGGGCTCGGATATGTGCCGGGGTATGTTGAGATTCGCAGACAAG
AGGGCGCTGGGAAAGGACGGAATTCGGTGGCTGAAGATTCATCTGGCCAA
CTTGTGTGGGAAGGACAAGTTGTCGTTTGAGGGGCGTGTAAAGTACGTGG
AAGGGAAAATGGAGGAGATCTACGACTCGGCCGCGCGGCCGCTGGACGGA
AAGGGATGGTGGCAGAAGGCGGAGGAGCCCTGGCAGGCCTTGGCGGTATG
TAAGGAGATCGTGGCAGCGTTGGAGAGTGGGGACGTTGAGGGGTTTCTGT
CGGGCGTACCGGTGCACATGGACGGGTCGTGTAATGGGCTGCAGCACTAC
GCGGCACTGGGGAGGGACGAGGAGGGGGCGAAGCAGGTGAATCTTATCCA
CTCGGAGGTGCCCCAGGACGTGTATACCGGGGTGTGCGATCGAGTGGTGA
AGCATGTCCATGCCGAGGCCGTGAAGACTTTGCCTCGCACGGCGACGGAG
GAGGAGAGGAGGCAGCAGCGATGCGCTCAGTTGGTGGATGGGGTGATCAA
TAGGAAGGTGGTGAAACAGACGGTCATGACGAGTGTATATGGCGTCACCT
ACATCGGTGCCCGCAAGCAGATCCAGGCGAGACTGAAAGAGAAATTACAG
GAGCGGGAGGGAGGGCGGATGCTGACCAAGGAGGAGGAGCAAGACGTCTA
CGAGGCCTCGAGATACGTAGCAACCGTCACTCTATCCAAGCTAGCGGAGC
TCTTCTCTGCAGCACGAAACATCATGGAATGGCTGGCAACGTGCGCCAGT
CTAGTGGCCAAGCAGGGGCAGCCCATGTCGTGGGTCACCCCCCTTGGCCT
CCCTGTCATTCAGCCCTACCGGCGCGACAAGGGCCTGTTGGTCAAGACCC
TGATTCAGAGCGTCATCCTAATTGATTGTAACGACAAACTGCCTGTCTCC
TCCGCCCGGCAGCGCTCTGCCTTCCCCCCCAATTTTGTTCACTCCCTGGA
CTCGACCCACATGCTTATGACGGCCAACAAGCTGCAGGCCCTCGACATCC
CCTTCACGGCCGTGCACGACAGCTACTGGTGTCACGCGAGCAATGTAGAC
ACCATGAACGCCTCCCTCCGCGACTGTTTCGTCGACCTGTACGAGCAGCC
CGTCCTCGAAAACCTGCGGGACTCTCTCGTAGCTCGTTTCCCGGACGTGG
AGTTCCCAGCCATCCCCCAGCGAGGCGCGCTAAAGCTGGACGAGGTGAAG
GACTCGCCCTACTTCTTCGATTAG back to top
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